View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6331_low_24 (Length: 248)

Name: NF6331_low_24
Description: NF6331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6331_low_24
NF6331_low_24
[»] chr3 (63 HSPs)
chr3 (1-101)||(9243901-9244001)
chr3 (101-161)||(10616772-10616832)
chr3 (101-161)||(15086221-15086281)
chr3 (91-161)||(37977505-37977574)
chr3 (101-161)||(22256201-22256261)
chr3 (100-161)||(38843548-38843609)
chr3 (103-161)||(10615276-10615333)
chr3 (102-160)||(46610009-46610066)
chr3 (100-161)||(28206980-28207041)
chr3 (100-161)||(46597507-46597567)
chr3 (101-161)||(18142196-18142255)
chr3 (102-161)||(11360346-11360405)
chr3 (102-161)||(54567742-54567800)
chr3 (103-161)||(4218865-4218923)
chr3 (102-160)||(22257332-22257390)
chr3 (99-161)||(30586159-30586221)
chr3 (100-161)||(24729629-24729690)
chr3 (100-149)||(28208155-28208204)
chr3 (104-161)||(48044276-48044332)
chr3 (101-161)||(18140939-18140998)
chr3 (101-161)||(18704952-18705012)
chr3 (101-161)||(51252283-51252343)
chr3 (101-160)||(54566511-54566568)
chr3 (102-149)||(8355577-8355624)
chr3 (102-161)||(14824750-14824809)
chr3 (102-161)||(30586397-30586456)
chr3 (101-160)||(31835841-31835899)
chr3 (103-161)||(27521521-27521579)
chr3 (99-161)||(46596092-46596153)
chr3 (100-161)||(49872711-49872773)
chr3 (100-161)||(5205353-5205414)
chr3 (100-149)||(19111268-19111317)
chr3 (101-161)||(23539261-23539322)
chr3 (102-135)||(27432682-27432715)
chr3 (93-161)||(37975959-37976028)
chr3 (115-160)||(51386416-51386461)
chr3 (101-161)||(5205115-5205175)
chr3 (101-161)||(7248864-7248923)
chr3 (99-135)||(27432846-27432882)
chr3 (101-161)||(39846374-39846434)
chr3 (102-161)||(7118087-7118146)
chr3 (98-161)||(7226064-7226127)
chr3 (102-161)||(29184980-29185038)
chr3 (102-161)||(31172299-31172357)
chr3 (102-161)||(41749386-41749444)
chr3 (102-161)||(47115561-47115619)
chr3 (96-135)||(49880497-49880536)
chr3 (99-161)||(3820710-3820771)
chr3 (101-135)||(4699974-4700008)
chr3 (103-161)||(29313789-29313846)
chr3 (107-149)||(40462525-40462567)
chr3 (102-135)||(3548380-3548413)
chr3 (100-161)||(15096522-15096583)
chr3 (100-161)||(25924039-25924100)
chr3 (100-156)||(31173589-31173643)
chr3 (120-161)||(45291437-45291478)
chr3 (101-149)||(11359456-11359503)
chr3 (101-161)||(18945798-18945858)
chr3 (101-149)||(26770249-26770297)
chr3 (101-149)||(26927509-26927557)
chr3 (121-161)||(34062337-34062377)
chr3 (101-161)||(49263028-49263087)
chr3 (101-149)||(51460774-51460821)
[»] chr6 (45 HSPs)
chr6 (101-161)||(24234328-24234388)
chr6 (102-161)||(22058277-22058336)
chr6 (101-161)||(24235629-24235689)
chr6 (101-160)||(12322802-12322861)
chr6 (102-161)||(33483696-33483755)
chr6 (102-161)||(54807-54864)
chr6 (100-160)||(56112-56171)
chr6 (104-160)||(24914440-24914496)
chr6 (102-161)||(12239900-12239959)
chr6 (102-161)||(14328645-14328703)
chr6 (102-161)||(14421655-14421713)
chr6 (102-161)||(22056482-22056541)
chr6 (96-161)||(33485074-33485139)
chr6 (101-160)||(12321561-12321620)
chr6 (101-150)||(3063493-3063541)
chr6 (106-161)||(3062194-3062249)
chr6 (102-161)||(23270208-23270266)
chr6 (103-161)||(14327370-14327427)
chr6 (103-161)||(14420380-14420437)
chr6 (103-149)||(31852003-31852049)
chr6 (96-161)||(8237633-8237697)
chr6 (101-146)||(18982913-18982958)
chr6 (101-158)||(18984006-18984063)
chr6 (101-150)||(32614551-32614600)
chr6 (100-161)||(34762180-34762240)
chr6 (97-161)||(21544447-21544511)
chr6 (97-148)||(3120346-3120396)
chr6 (93-135)||(13497981-13498024)
chr6 (101-160)||(21939121-21939180)
chr6 (102-149)||(25400788-25400835)
chr6 (99-161)||(26644690-26644749)
chr6 (99-161)||(26750656-26750715)
chr6 (98-157)||(32614168-32614226)
chr6 (115-161)||(21226957-21227003)
chr6 (101-135)||(33751947-33751981)
chr6 (100-161)||(20754572-20754632)
chr6 (100-149)||(22365832-22365880)
chr6 (96-161)||(24602642-24602707)
chr6 (98-150)||(1438619-1438671)
chr6 (102-161)||(7922317-7922373)
chr6 (100-160)||(10366399-10366459)
chr6 (100-160)||(21604354-21604414)
chr6 (101-149)||(22366229-22366276)
chr6 (101-149)||(29942454-29942501)
chr6 (101-161)||(31851757-31851816)
[»] chr5 (49 HSPs)
chr5 (101-161)||(15060162-15060222)
chr5 (101-161)||(15616498-15616558)
chr5 (100-161)||(11957647-11957708)
chr5 (100-161)||(41064142-41064203)
chr5 (93-161)||(9750438-9750506)
chr5 (101-161)||(11956138-11956198)
chr5 (101-161)||(41065655-41065715)
chr5 (102-161)||(21776905-21776964)
chr5 (99-161)||(15061822-15061883)
chr5 (100-161)||(15615101-15615161)
chr5 (101-156)||(19599969-19600024)
chr5 (102-161)||(35599312-35599371)
chr5 (103-161)||(35600537-35600595)
chr5 (101-150)||(19601276-19601325)
chr5 (100-161)||(29321306-29321367)
chr5 (98-149)||(711233-711284)
chr5 (102-149)||(6055187-6055234)
chr5 (103-161)||(28819537-28819594)
chr5 (101-161)||(9751675-9751734)
chr5 (100-160)||(30798578-30798637)
chr5 (102-160)||(11890099-11890155)
chr5 (102-161)||(30796579-30796637)
chr5 (101-135)||(711483-711517)
chr5 (103-161)||(9227083-9227141)
chr5 (103-161)||(10011619-10011676)
chr5 (103-161)||(13948581-13948638)
chr5 (97-135)||(33053071-33053109)
chr5 (103-161)||(33658871-33658929)
chr5 (101-135)||(39153415-39153449)
chr5 (100-161)||(9673128-9673189)
chr5 (98-135)||(22642347-22642384)
chr5 (101-161)||(28820554-28820615)
chr5 (102-135)||(39418976-39419009)
chr5 (101-149)||(5699754-5699802)
chr5 (92-148)||(15395534-15395589)
chr5 (101-149)||(18229748-18229796)
chr5 (102-195)||(10012770-10012863)
chr5 (121-160)||(13947734-13947773)
chr5 (103-161)||(21149100-21149156)
chr5 (107-149)||(16504957-16504999)
chr5 (100-149)||(889066-889114)
chr5 (96-161)||(2870643-2870707)
chr5 (98-135)||(10976772-10976808)
chr5 (100-161)||(11438337-11438397)
chr5 (100-161)||(29754046-29754107)
chr5 (93-149)||(23932466-23932521)
chr5 (101-161)||(26034844-26034903)
chr5 (99-135)||(33659130-33659166)
chr5 (101-149)||(38482317-38482364)
[»] chr2 (60 HSPs)
chr2 (98-161)||(1902926-1902989)
chr2 (103-161)||(22466982-22467040)
chr2 (101-160)||(23834580-23834639)
chr2 (100-158)||(1904410-1904468)
chr2 (100-161)||(22468223-22468284)
chr2 (100-161)||(22474444-22474505)
chr2 (101-161)||(7577775-7577835)
chr2 (102-161)||(7576325-7576384)
chr2 (100-161)||(18249629-18249690)
chr2 (105-161)||(38875991-38876047)
chr2 (101-160)||(18250889-18250948)
chr2 (102-161)||(44366867-44366926)
chr2 (99-161)||(38937507-38937568)
chr2 (103-160)||(16670500-16670556)
chr2 (101-161)||(23835771-23835830)
chr2 (101-161)||(28462492-28462552)
chr2 (102-161)||(38935945-38936002)
chr2 (102-161)||(38815091-38815150)
chr2 (94-135)||(18701811-18701852)
chr2 (120-161)||(19684220-19684261)
chr2 (100-161)||(25227821-25227882)
chr2 (101-161)||(85438-85497)
chr2 (101-161)||(15747750-15747809)
chr2 (101-161)||(21903922-21903982)
chr2 (101-161)||(44241096-44241155)
chr2 (100-135)||(34635967-34636002)
chr2 (97-143)||(33868470-33868516)
chr2 (100-161)||(30371383-30371443)
chr2 (101-149)||(15481488-15481536)
chr2 (101-133)||(18555575-18555607)
chr2 (101-161)||(31108345-31108405)
chr2 (121-161)||(43015200-43015240)
chr2 (101-156)||(19686183-19686237)
chr2 (98-149)||(22116151-22116201)
chr2 (102-149)||(28149433-28149480)
chr2 (114-161)||(35337135-35337181)
chr2 (98-149)||(38877032-38877082)
chr2 (102-161)||(44242354-44242412)
chr2 (102-151)||(5970763-5970810)
chr2 (103-161)||(12693811-12693869)
chr2 (99-149)||(19493459-19493508)
chr2 (103-149)||(37147796-37147842)
chr2 (103-161)||(38210865-38210922)
chr2 (104-161)||(15809374-15809430)
chr2 (100-161)||(28461066-28461125)
chr2 (100-149)||(31551907-31551956)
chr2 (100-161)||(34635704-34635764)
chr2 (100-161)||(34831489-34831550)
chr2 (120-161)||(39341283-39341324)
chr2 (100-160)||(41305879-41305937)
chr2 (105-161)||(1499112-1499168)
chr2 (105-161)||(4024874-4024930)
chr2 (120-160)||(8238006-8238046)
chr2 (105-149)||(15808728-15808772)
chr2 (101-161)||(17328091-17328150)
chr2 (97-133)||(22829364-22829400)
chr2 (105-149)||(28141691-28141734)
chr2 (120-160)||(39150243-39150282)
chr2 (121-161)||(45161380-45161420)
chr2 (101-133)||(45323919-45323951)
[»] chr4 (57 HSPs)
chr4 (99-161)||(34739885-34739947)
chr4 (100-160)||(55500405-55500465)
chr4 (100-161)||(34741392-34741453)
chr4 (101-161)||(29249708-29249768)
chr4 (102-161)||(12566937-12566996)
chr4 (102-161)||(20963698-20963757)
chr4 (103-160)||(21994328-21994384)
chr4 (95-160)||(54554376-54554440)
chr4 (100-160)||(17695972-17696032)
chr4 (101-161)||(50881421-50881480)
chr4 (99-160)||(15695178-15695239)
chr4 (101-149)||(29248241-29248288)
chr4 (101-161)||(43860912-43860971)
chr4 (102-161)||(9410281-9410340)
chr4 (100-159)||(21798330-21798389)
chr4 (102-161)||(34027193-34027251)
chr4 (103-161)||(13334823-13334881)
chr4 (102-160)||(54354190-54354248)
chr4 (100-161)||(11563516-11563576)
chr4 (100-161)||(13910850-13910911)
chr4 (100-161)||(17289740-17289801)
chr4 (100-161)||(34025912-34025972)
chr4 (101-161)||(18454191-18454251)
chr4 (101-161)||(20962193-20962252)
chr4 (101-161)||(24215740-24215799)
chr4 (105-161)||(51752686-51752741)
chr4 (100-135)||(5401759-5401794)
chr4 (100-135)||(18454454-18454489)
chr4 (102-161)||(54555350-54555408)
chr4 (101-135)||(18320720-18320754)
chr4 (102-144)||(45900528-45900570)
chr4 (100-149)||(21246474-21246523)
chr4 (100-160)||(11862026-11862085)
chr4 (97-161)||(20612961-20613024)
chr4 (101-161)||(51162076-51162136)
chr4 (104-160)||(51164020-51164075)
chr4 (93-161)||(54053560-54053628)
chr4 (101-161)||(55499249-55499309)
chr4 (101-144)||(145210-145253)
chr4 (102-161)||(550673-550731)
chr4 (102-149)||(19875981-19876028)
chr4 (102-149)||(21780366-21780413)
chr4 (101-156)||(49629634-49629687)
chr4 (102-161)||(50138488-50138546)
chr4 (99-150)||(50879906-50879956)
chr4 (102-160)||(7272266-7272324)
chr4 (103-149)||(49552008-49552054)
chr4 (101-159)||(51754201-51754258)
chr4 (96-161)||(53231768-53231831)
chr4 (102-135)||(5402022-5402055)
chr4 (104-149)||(12352470-12352514)
chr4 (102-135)||(19875744-19875777)
chr4 (100-149)||(41331767-41331815)
chr4 (121-161)||(9136403-9136443)
chr4 (101-149)||(21780121-21780168)
chr4 (101-161)||(38656054-38656113)
chr4 (100-160)||(40479516-40479575)
[»] scaffold0228 (3 HSPs)
scaffold0228 (100-161)||(8080-8140)
scaffold0228 (100-161)||(15662-15722)
scaffold0228 (100-161)||(25614-25674)
[»] scaffold0040 (2 HSPs)
scaffold0040 (100-161)||(66042-66103)
scaffold0040 (102-160)||(64503-64561)
[»] chr8 (53 HSPs)
chr8 (100-161)||(39810085-39810146)
chr8 (101-161)||(27163115-27163175)
chr8 (102-160)||(42348961-42349019)
chr8 (100-156)||(31985009-31985065)
chr8 (101-161)||(42350176-42350236)
chr8 (99-161)||(1601253-1601314)
chr8 (103-161)||(27164657-27164714)
chr8 (96-161)||(39513861-39513925)
chr8 (102-161)||(31986227-31986287)
chr8 (102-161)||(39808649-39808706)
chr8 (102-161)||(2270290-2270348)
chr8 (102-161)||(6819195-6819254)
chr8 (100-161)||(1601671-1601732)
chr8 (100-149)||(28575122-28575171)
chr8 (102-150)||(2269042-2269090)
chr8 (101-149)||(27543410-27543458)
chr8 (101-161)||(40702009-40702068)
chr8 (102-161)||(1600077-1600135)
chr8 (115-161)||(9768303-9768349)
chr8 (103-161)||(34901503-34901560)
chr8 (101-154)||(6820087-6820140)
chr8 (101-134)||(24971203-24971236)
chr8 (105-149)||(5703055-5703099)
chr8 (101-161)||(11424335-11424395)
chr8 (101-133)||(24970962-24970994)
chr8 (97-149)||(31343359-31343411)
chr8 (102-133)||(25277472-25277503)
chr8 (102-133)||(41565270-41565301)
chr8 (99-161)||(20076383-20076445)
chr8 (103-161)||(40701347-40701404)
chr8 (102-135)||(3912256-3912289)
chr8 (101-161)||(4105279-4105337)
chr8 (100-161)||(5160498-5160559)
chr8 (100-161)||(11105949-11106009)
chr8 (92-149)||(14329611-14329667)
chr8 (100-149)||(34985333-34985381)
chr8 (100-161)||(39515121-39515181)
chr8 (102-135)||(43978565-43978598)
chr8 (101-149)||(7988791-7988839)
chr8 (103-135)||(10710509-10710541)
chr8 (102-161)||(16093608-16093665)
chr8 (101-133)||(16933798-16933830)
chr8 (98-130)||(20164620-20164652)
chr8 (105-149)||(28574544-28574588)
chr8 (101-161)||(29309564-29309623)
chr8 (104-160)||(34902737-34902793)
chr8 (102-158)||(37403461-37403517)
chr8 (101-161)||(37611480-37611540)
chr8 (103-135)||(38500284-38500316)
chr8 (98-130)||(38982106-38982138)
chr8 (98-130)||(39013203-39013235)
chr8 (121-161)||(39452350-39452390)
chr8 (99-135)||(41565533-41565569)
[»] chr7 (58 HSPs)
chr7 (100-161)||(17763334-17763395)
chr7 (101-161)||(34158057-34158117)
chr7 (104-161)||(1589387-1589444)
chr7 (101-161)||(5219035-5219095)
chr7 (101-161)||(11056728-11056788)
chr7 (102-161)||(17764698-17764757)
chr7 (96-161)||(48168844-48168908)
chr7 (101-161)||(9553399-9553458)
chr7 (101-161)||(9554258-9554318)
chr7 (101-161)||(23161099-23161158)
chr7 (101-161)||(24434906-24434966)
chr7 (101-161)||(24757990-24758050)
chr7 (101-160)||(12814593-12814652)
chr7 (102-161)||(45865650-45865709)
chr7 (95-141)||(1676411-1676457)
chr7 (101-150)||(1594134-1594182)
chr7 (100-161)||(13286864-13286925)
chr7 (100-148)||(15037417-15037465)
chr7 (99-161)||(16902337-16902396)
chr7 (102-161)||(19410509-19410568)
chr7 (102-161)||(38193193-38193251)
chr7 (101-135)||(38192961-38192995)
chr7 (100-160)||(1492758-1492818)
chr7 (99-135)||(12180859-12180895)
chr7 (101-149)||(13772973-13773021)
chr7 (101-133)||(13797415-13797447)
chr7 (101-149)||(19272460-19272507)
chr7 (99-135)||(20041160-20041196)
chr7 (105-161)||(45164118-45164174)
chr7 (101-161)||(47160493-47160553)
chr7 (114-161)||(10659959-10660006)
chr7 (102-161)||(13279416-13279474)
chr7 (100-135)||(14079021-14079056)
chr7 (100-135)||(14389049-14389084)
chr7 (100-135)||(44413881-44413916)
chr7 (103-161)||(48104510-48104566)
chr7 (101-135)||(24555703-24555737)
chr7 (99-161)||(24555901-24555961)
chr7 (119-161)||(46459000-46459042)
chr7 (104-150)||(48896481-48896526)
chr7 (100-149)||(1830810-1830858)
chr7 (100-161)||(14554447-14554507)
chr7 (108-149)||(24204818-24204859)
chr7 (124-161)||(42509037-42509074)
chr7 (96-161)||(48945178-48945242)
chr7 (101-149)||(1831990-1832037)
chr7 (105-161)||(4517868-4517924)
chr7 (114-161)||(4675938-4675983)
chr7 (101-161)||(5217763-5217823)
chr7 (106-150)||(8174888-8174931)
chr7 (101-129)||(23162208-23162236)
chr7 (101-161)||(24204967-24205027)
chr7 (101-149)||(28157022-28157070)
chr7 (101-149)||(33757409-33757456)
chr7 (98-134)||(35913310-35913345)
chr7 (102-150)||(38092035-38092083)
chr7 (98-130)||(44377458-44377490)
chr7 (98-130)||(44386325-44386357)
[»] chr1 (71 HSPs)
chr1 (101-161)||(9441566-9441626)
chr1 (96-161)||(33667631-33667696)
chr1 (101-161)||(14625369-14625428)
chr1 (100-160)||(23322609-23322669)
chr1 (100-195)||(43635833-43635927)
chr1 (100-161)||(9442988-9443049)
chr1 (101-161)||(14626777-14626837)
chr1 (102-161)||(52084824-52084884)
chr1 (102-161)||(20132381-20132440)
chr1 (102-161)||(31648075-31648134)
chr1 (103-161)||(47146367-47146425)
chr1 (104-161)||(1825296-1825352)
chr1 (100-161)||(1826433-1826494)
chr1 (100-161)||(26095812-26095872)
chr1 (100-160)||(25600928-25600988)
chr1 (101-161)||(26097026-26097085)
chr1 (102-150)||(52083580-52083628)
chr1 (101-160)||(13916091-13916150)
chr1 (99-161)||(23321260-23321322)
chr1 (105-159)||(40247381-40247435)
chr1 (99-160)||(32131903-32131963)
chr1 (100-161)||(36343152-36343213)
chr1 (101-158)||(44754604-44754661)
chr1 (105-149)||(5560876-5560920)
chr1 (100-160)||(8928813-8928872)
chr1 (101-161)||(12277452-12277512)
chr1 (100-160)||(16785720-16785779)
chr1 (101-161)||(24730202-24730262)
chr1 (101-161)||(33934636-33934696)
chr1 (101-149)||(50105407-50105455)
chr1 (121-160)||(13917270-13917309)
chr1 (101-160)||(14978709-14978767)
chr1 (102-161)||(51470129-51470187)
chr1 (97-135)||(34360269-34360307)
chr1 (103-160)||(13902066-13902122)
chr1 (101-150)||(13903381-13903429)
chr1 (100-161)||(15961582-15961643)
chr1 (100-161)||(28411147-28411207)
chr1 (100-149)||(32130642-32130691)
chr1 (100-149)||(44311206-44311254)
chr1 (101-150)||(47145145-47145194)
chr1 (105-161)||(15336378-15336432)
chr1 (101-149)||(15790483-15790531)
chr1 (101-161)||(15961740-15961800)
chr1 (121-161)||(38741493-38741533)
chr1 (101-161)||(50721925-50721985)
chr1 (98-161)||(8984849-8984912)
chr1 (100-135)||(42736612-42736647)
chr1 (101-135)||(8620217-8620251)
chr1 (103-161)||(10490236-10490294)
chr1 (103-161)||(16786147-16786205)
chr1 (99-161)||(24987605-24987665)
chr1 (101-135)||(27794357-27794391)
chr1 (103-161)||(31648585-31648642)
chr1 (99-149)||(44200324-44200373)
chr1 (101-161)||(7780220-7780278)
chr1 (120-161)||(8930345-8930386)
chr1 (98-135)||(9439427-9439463)
chr1 (100-149)||(22591278-22591326)
chr1 (100-161)||(22604661-22604721)
chr1 (100-149)||(24730054-24730103)
chr1 (100-133)||(27794620-27794653)
chr1 (104-148)||(2273503-2273546)
chr1 (97-161)||(7112489-7112552)
chr1 (120-152)||(8985815-8985847)
chr1 (93-161)||(16698860-16698927)
chr1 (101-149)||(16699115-16699163)
chr1 (97-149)||(21853411-21853462)
chr1 (100-160)||(27547323-27547383)
chr1 (101-161)||(35979584-35979642)
chr1 (101-149)||(47221949-47221996)
[»] scaffold0210 (2 HSPs)
scaffold0210 (100-161)||(4705-4766)
scaffold0210 (102-160)||(5895-5953)
[»] scaffold0176 (1 HSPs)
scaffold0176 (100-161)||(286-347)
[»] scaffold0804 (1 HSPs)
scaffold0804 (101-161)||(2732-2792)
[»] scaffold0725 (2 HSPs)
scaffold0725 (101-161)||(3913-3972)
scaffold0725 (101-161)||(4955-5016)
[»] scaffold0014 (2 HSPs)
scaffold0014 (100-156)||(227367-227423)
scaffold0014 (102-161)||(228585-228645)
[»] scaffold0227 (1 HSPs)
scaffold0227 (103-161)||(23685-23743)
[»] scaffold0246 (2 HSPs)
scaffold0246 (100-161)||(15870-15930)
scaffold0246 (100-160)||(17455-17514)
[»] scaffold0250 (2 HSPs)
scaffold0250 (101-161)||(10079-10138)
scaffold0250 (84-161)||(11567-11643)
[»] scaffold0031 (1 HSPs)
scaffold0031 (101-161)||(2058-2118)
[»] scaffold0136 (2 HSPs)
scaffold0136 (100-161)||(35597-35657)
scaffold0136 (100-160)||(636-695)
[»] scaffold0769 (2 HSPs)
scaffold0769 (100-135)||(3912-3947)
scaffold0769 (100-161)||(4150-4210)
[»] scaffold1797 (1 HSPs)
scaffold1797 (115-161)||(677-723)
[»] scaffold0079 (1 HSPs)
scaffold0079 (101-149)||(6809-6857)
[»] scaffold0039 (1 HSPs)
scaffold0039 (101-161)||(110408-110468)
[»] scaffold0009 (2 HSPs)
scaffold0009 (98-161)||(150224-150287)
scaffold0009 (101-149)||(149985-150033)
[»] scaffold0129 (1 HSPs)
scaffold0129 (102-160)||(37389-37447)
[»] scaffold0022 (1 HSPs)
scaffold0022 (99-161)||(63028-63090)
[»] scaffold0007 (1 HSPs)
scaffold0007 (101-146)||(16084-16129)
[»] scaffold0632 (1 HSPs)
scaffold0632 (105-149)||(2771-2815)
[»] scaffold0430 (1 HSPs)
scaffold0430 (105-161)||(12487-12543)


Alignment Details
Target: chr3 (Bit Score: 77; Significance: 8e-36; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 9243901 - 9244001
Alignment:
Q  1 cgtcgactgagatgaaattggataatctcatttaattacgtgatgaagttacaactcttagatgtttgatctagatcaacagctgacatcatttttatat 100  Q
    |||| ||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  9243901 cgtctactgaaatgaaattggataatctcatttaattaggtgttgaagttacaactcttaaatgtctgatctagatcaacagctgacatcatttttatat 9244000  T
Q  101 a 101  Q
    |    
T  9244001 a 9244001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 10616832 - 10616772
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  10616832 agggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaa 10616772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 15086221 - 15086281
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  15086221 agggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaa 15086281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 161
Target Start/End: Complemental strand, 37977574 - 37977505
Alignment:
Q  91 atttttatatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  37977574 atttatataaagggttaataggtctttaccccc-tgtaatataggacacttttggttttgccccctgtaaa 37977505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 22256201 - 22256261
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  22256201 agggttaataagtctttacccccctgtaatatatgacacttttggttttgccccctgtaaa 22256261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 38843609 - 38843548
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||||||||    
T  38843609 tagggttgataggtctttacccctttgtaatataggacacttttggttttgccccctgtaaa 38843548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 10615276 - 10615333
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  10615276 ggttaataggtctttacccc-ctgtaatatagggcacttttggttttgccccctgtaaa 10615333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 46610009 - 46610066
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||    
T  46610009 gggttaataggtctttacccc-ctgtaatatagggcacttttggttttgccccctgtaa 46610066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 28206980 - 28207041
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||| |||||||| ||||||||||||| |||||||||||||  ||||||||||    
T  28206980 tagggttaatagggctttaccctcctgtaatatagggcacttttggttttcccccctgtaaa 28207041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 46597567 - 46597507
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||| | ||||||||    
T  46597567 tagggttaataggtctttaccccc-tgtaatatagggcacttttggttttgcctcctgtaaa 46597507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 18142255 - 18142196
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||| |||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  18142255 agggttaataggcctttaccccc-tgtaatataggtcacttttggttttgccccctgtaaa 18142196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 11360405 - 11360346
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||| ||||||||||||| |||||||| |||||||||||||  ||||||||||    
T  11360405 gggttaataggcctttacccccctgcaatataggtcacttttggttttcccccctgtaaa 11360346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 54567800 - 54567742
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||    
T  54567800 gggttaataggtctttaccccc-tgtaatataggtcacttttggttttgccccctataaa 54567742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 4218923 - 4218865
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||| ||||||||||  |||||||||| |||||||||||||| ||||||||||    
T  4218923 ggttaataggcctttaccccctggtaatataggtcacttttggttttgccccctgtaaa 4218865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 22257390 - 22257332
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||||||||||||||||||| |||||| ||||||| |||||| ||| |||||    
T  22257390 gggttaataggtctttacccccctgtattatagggcactttttgttttgccccttgtaa 22257332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 30586159 - 30586221
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||||||| || ||  ||||||  ||||||||||    
T  30586159 atagggttaataggtctttacccccctgtaatataggtcatttccggttttcacccctgtaaa 30586221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 24729690 - 24729629
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||| |||||| |||||||||||||||  ||||||||||||| | ||||||||    
T  24729690 tagggttaataggcctttactcccctgtaatataggttacttttggttttgcctcctgtaaa 24729629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 28208204 - 28208155
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||  |||||||||||||||||||||| |||||||||||||    
T  28208204 tagggttaatagagctttacccccctgtaatatagggcacttttggtttt 28208155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 48044276 - 48044332
Alignment:
Q  104 gttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||||||    
T  48044276 gttaataggtctttaccccc-tgtgatatagggcacttttggttttgccccctgtaaa 48044332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 18140939 - 18140998
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||| ||||||||| |||||||||||| ||||||||||||||  |||||||||    
T  18140939 agggttaataggcctttacccc-ctgtaatataggtcacttttggttttgctccctgtaaa 18140998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 18704952 - 18705012
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||  ||||||||||| |||||||||| |||||||||||||  ||||||||||    
T  18704952 agggttaatagagctttaccccccagtaatatagggcacttttggttttcccccctgtaaa 18705012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 51252343 - 51252283
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||| |||||||||||||||| || || |||||||  ||||||||||    
T  51252343 agggttaataggtctttatccccctgtaatataggtcatttctggttttcccccctgtaaa 51252283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 54566511 - 54566568
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||||||||||  |||||||||  ||||||||||| ||||||||||||||||||||||||    
T  54566511 agggttaatagacctttacccc--tgtaatataggtcacttttggttttgtcccctgtaa 54566568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 149
Target Start/End: Complemental strand, 8355624 - 8355577
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||||||||||||||||||||||||| || || |||||||    
T  8355624 gggttaataggtctttacccccctgtaatataggtcatttctggtttt 8355577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 14824750 - 14824809
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||  |||||| ||||||||||||||| |||||||| ||||| ||||||||||    
T  14824750 gggttaatagtgctttacgcccctgtaatataggtcacttttgattttgccccctgtaaa 14824809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 30586456 - 30586397
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||| |||||||||| || || |||||||  ||||||||||    
T  30586456 gggttaataggtctttaccccccagtaatataggtcatttctggttttcacccctgtaaa 30586397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 31835899 - 31835841
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||||||||| |||||||||||| ||||||||| |||||||||| ||||| |||||||||    
T  31835899 agggttaatatgtctttaccccc-tgtaatatatgacacttttgattttgccccctgtaa 31835841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 27521521 - 27521579
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||| |||||||||||  | ||||||||||  ||||||||||    
T  27521521 ggttaataggtctttacccccgtgtaatataggttatttttggttttcccccctgtaaa 27521579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 46596092 - 46596153
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||  ||||||||| ||||||||||||  ||||||||||||||||| ||||||    
T  46596092 atagggttaatagagctttacccc-ctgtaatatagggtacttttggttttgtcccatgtaaa 46596153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 49872711 - 49872773
Alignment:
Q  100 tagggttaataggtcttta-cccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||| ||||||||||||||||| || || |||||||  ||||||||||    
T  49872711 tagggttaataggtctttaccccccctgtaatataggtcatttctggttttcacccctgtaaa 49872773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 5205414 - 5205353
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||| ||||||||||||||||||||| || ||  ||||||  ||||||||||    
T  5205414 tagggttaataggtttttacccccctgtaatataggtcatttccggttttcccccctgtaaa 5205353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 19111317 - 19111268
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||   ||||||||||||||||||||| |||||||||||||    
T  19111317 tagggttaatagtgttttacccccctgtaatataggtcacttttggtttt 19111268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 23539261 - 23539322
Alignment:
Q  101 agggttaataggtctttacccc-cctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||| ||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  23539261 agggttaataggcctttaccccccctgtaatatacaccacttttggttttgccccctgtaaa 23539322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 135
Target Start/End: Original strand, 27432682 - 27432715
Alignment:
Q  102 gggttaataggtctttacccccctgtaatatagg 135  Q
    ||||||||||||||||||||||||||||||||||    
T  27432682 gggttaataggtctttacccccctgtaatatagg 27432715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 37975959 - 37976028
Alignment:
Q  93 ttttatata-gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||| ||||||||||   |||||||||||||||||||||  ||||||||||||| ||||| ||||    
T  37975959 ttttatataagggttaatagagttttacccccctgtaatatagggtacttttggttttgccccctataaa 37976028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 51386461 - 51386416
Alignment:
Q  115 tttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||||    
T  51386461 tttagccccctgtaatataagacacttttggttttgtcctctgtaa 51386416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 5205115 - 5205175
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||| ||||||||||||||||||||| || ||  ||||||  ||||||||||    
T  5205115 agggttaataggtttttacccccctgtaatataggtcatttccggttttcccccctgtaaa 5205175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 7248864 - 7248923
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||| ||||||||| |||||||||||  || ||||||||||| ||||||||||    
T  7248864 agggttaataggcctttacccc-ctgtaatatagatcatttttggttttgccccctgtaaa 7248923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 27432882 - 27432846
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||||||||||||||| ||||||||||||||    
T  27432882 atagggttaataggtctttacctccctgtaatatagg 27432846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 39846374 - 39846434
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||| |  |||||||||| ||||||||||| || |||||||||| |||||||||||    
T  39846374 agggttaatggtgctttacccccttgtaatataggtcatttttggttttctcccctgtaaa 39846434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 7118087 - 7118146
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||| ||||||||||||||| || ||  ||||||  ||||||||||    
T  7118087 gggttaataggtctttacacccctgtaatataggtcatttccggttttcccccctgtaaa 7118146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 7226064 - 7226127
Alignment:
Q  98 tatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||  |||||||||||||||||||||| || ||| |||||   ||||||||||    
T  7226064 tatagggttaatagtgctttacccccctgtaatataggtcattttcggtttccccccctgtaaa 7226127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 29185038 - 29184980
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||| |||||| ||| ||||||||||| |||||||||||||| | ||||||||    
T  29185038 gggttaataggcctttactccc-tgtaatataggtcacttttggttttgcctcctgtaaa 29184980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 31172299 - 31172357
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||| ||||||| || ||||||||||| || ||||||||||||| ||||||||    
T  31172299 gggttaataggcctttaccacc-tgtaatataggtcatttttggttttgtctcctgtaaa 31172357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 41749386 - 41749444
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||| |||||||||  ||||||||||| |||||||| |||| |||||||||||    
T  41749386 gggttaataggcctttacccct-tgtaatataggtcacttttgattttctcccctgtaaa 41749444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 47115619 - 47115561
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||| ||||||||||| || ||| |||||| ||| |||||||    
T  47115619 gggttaataggtctttaccccc-tgtaatataggtcattttcggttttctcctctgtaaa 47115561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 135
Target Start/End: Original strand, 49880497 - 49880536
Alignment:
Q  96 tatatagggttaataggtctttacccccctgtaatatagg 135  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  49880497 tatatagggttaataggtctttatccccctataatatagg 49880536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 3820771 - 3820710
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||  |||||||| ||||||||||||| || |||| ||||| |||||||||||    
T  3820771 atagggttaatagtgctttaccctcctgtaatataggtcattttttgtttt-tcccctgtaaa 3820710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 135
Target Start/End: Original strand, 4699974 - 4700008
Alignment:
Q  101 agggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||||||||||||| ||||||||||||||    
T  4699974 agggttaataggtctttacctccctgtaatatagg 4700008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 29313789 - 29313846
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||| || ||||||||||| || ||| |||||| |||||||||||    
T  29313789 ggttaataggtctttacctcc-tgtaatataggtcattttcggttttctcccctgtaaa 29313846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 149
Target Start/End: Original strand, 40462525 - 40462567
Alignment:
Q  107 aataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||    
T  40462525 aataggtctttacccccttgtaatataggtcacttctggtttt 40462567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 135
Target Start/End: Complemental strand, 3548413 - 3548380
Alignment:
Q  102 gggttaataggtctttacccccctgtaatatagg 135  Q
    ||||||||||||||||||||| ||||||||||||    
T  3548413 gggttaataggtctttacccctctgtaatatagg 3548380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 15096522 - 15096583
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||| |  |||||||||||||||||||||| || |||| |||||  ||||||||||    
T  15096522 tagggttaatggtgctttacccccctgtaatataggtcattttttgtttttccccctgtaaa 15096583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 25924039 - 25924100
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||| |  |||||||||||||||||||||| || |||| |||||  ||||||||||    
T  25924039 tagggttaatggtgctttacccccctgtaatataggtcattttttgttttcccccctgtaaa 25924100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 31173643 - 31173589
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccct 156  Q
    |||| ||||||||||||||||||  ||||||||||  |||||||||||||| |||||    
T  31173643 taggattaataggtctttacccc--tgtaatatagatcacttttggttttgccccct 31173589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 45291437 - 45291478
Alignment:
Q  120 ccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||| |||||||||||||| ||| ||||||    
T  45291437 ccccctgtaatataggtcacttttggttttgccccttgtaaa 45291478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 11359456 - 11359503
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||| |||||||||| || |||||||| |||||||||||||    
T  11359456 agggttaataggcctttaccccc-tgcaatataggtcacttttggtttt 11359503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 18945798 - 18945858
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||| |  |||||||| ||||||||||||| || ||||||||||  ||||||||||    
T  18945798 agggttaatggtactttacccacctgtaatataggtcatttttggttttaccccctgtaaa 18945858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 26770297 - 26770249
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||  |||||||||||||||||||||| || ||| ||||||    
T  26770297 agggttaatagtgctttacccccctgtaatataggtcattttcggtttt 26770249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 26927509 - 26927557
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||||||||||||| || |||||||||  | ||||||||||    
T  26927509 agggttaataggtctttacccctctataatataggttatttttggtttt 26927557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 34062377 - 34062337
Alignment:
Q  121 cccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||| |||||||||||||  ||||||||||    
T  34062377 cccctgtaatataggtcacttttggtttttccccctgtaaa 34062337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 49263028 - 49263087
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||| |||||| ||||||||  |||||||| |||| ||| |||||||    
T  49263028 agggttaataggtcttta-ccccctataatatagatcacttttgattttctccactgtaaa 49263087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 51460821 - 51460774
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||||||||| ||||||||||||||| || |||| |||||    
T  51460821 agggttaataggtctttac-cccctgtaatataggtcattttttgtttt 51460774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 6e-24; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 24234328 - 24234388
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24234328 agggttaataggtctttacccccctgtaatataggacacttttggttttgccccctgtaaa 24234388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 22058336 - 22058277
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  22058336 gggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaa 22058277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 24235689 - 24235629
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  24235689 agggttaataggtctttacccctctgtaatatagggcacttttggttttgccccctgtaaa 24235629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 12322861 - 12322802
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||    
T  12322861 agggttaataggtctttacccccctgtaatatagggcacttttgattttgccccctgtaa 12322802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 33483696 - 33483755
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||    
T  33483696 gggttaataggtctttaccaccctgtaatataggacacttttggttttgccctctgtaaa 33483755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 54807 - 54864
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||    
T  54807 gggttaataggtcttt--cctcctgtaatataggacacttttggttttgtcccctgtaaa 54864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 56171 - 56112
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  56171 tagggttaataggtctttaccccc-tgtaatatagggcacttttgattttgtcccctgtaa 56112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 24914440 - 24914496
Alignment:
Q  104 gttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||    
T  24914440 gttaataggtcattacccccctgtaatataggacacttttgattttgccccctgtaa 24914496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 12239959 - 12239900
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||| |||||| | ||||||||||||| |||||||||||    
T  12239959 gggttaataggtctttacccccctgcaatatatgtcacttttggttttctcccctgtaaa 12239900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 14328703 - 14328645
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  14328703 gggttaataggtctttaccccc-tgtaatataggtcacttttggttttgccccctgtaaa 14328645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 14421713 - 14421655
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  14421713 gggttaataggtctttaccccc-tgtaatataggtcacttttggttttgccccctgtaaa 14421655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 22056482 - 22056541
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||| | |||||||||||||| |||||||||||||| ||||||||||    
T  22056482 gggttaataggtctttaactccctgtaatatagggcacttttggttttgccccctgtaaa 22056541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 33485139 - 33485074
Alignment:
Q  96 tatatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||| ||  ||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  33485139 tatatagggttaacagagctttacccccctgtaatatagggtacttttggttttgccccctgtaaa 33485074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 12321561 - 12321620
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||||| | |||||||    
T  12321561 agggttaataggtctttatccccctgtaatatagggtacttttggttttgcctcctgtaa 12321620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 3063541 - 3063493
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttg 150  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  3063541 agggttaataggtctttaccccc-tgtaatataggtcacttttggttttg 3063493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 3062194 - 3062249
Alignment:
Q  106 taataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||| || |||||||    
T  3062194 taataggcctttacccctctgtaatataggtcacttttggttttgcccactgtaaa 3062249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 23270266 - 23270208
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||| ||||| ||||||||| |||||||| |||||||| |||||||    
T  23270266 gggttaataggtctttac-cccctttaatataggtcacttttgattttgtcctctgtaaa 23270208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 14327370 - 14327427
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||| ||||||||| |||||||||| | |||||||||||||| ||||||||||    
T  14327370 ggttaataggcctttacccc-ctgtaatatacgtcacttttggttttgccccctgtaaa 14327427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 14420380 - 14420437
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||| ||||||||| |||||||||| | |||||||||||||| ||||||||||    
T  14420380 ggttaataggcctttacccc-ctgtaatatacgtcacttttggttttgccccctgtaaa 14420437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 31852049 - 31852003
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||||||||||||||||||||||| || ||| ||||||    
T  31852049 ggttaataggtctttacccccctgtaatataggtcattttcggtttt 31852003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 8237633 - 8237697
Alignment:
Q  96 tatatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||   |||||||||||||||||||||| || ||| |||||| |||||||||||    
T  8237633 tatatagggttaataatgctttacccccctgtaatataggtcattttcggtttt-tcccctgtaaa 8237697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 18982913 - 18982958
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggt 146  Q
    |||||||||||| ||||||||||||| |||||||| ||||||||||    
T  18982913 agggttaataggcctttacccccctgcaatataggtcacttttggt 18982958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 158
Target Start/End: Complemental strand, 18984063 - 18984006
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgt 158  Q
    |||||||||||| |||||||| |||| |||||||| |||||||||||||  |||||||    
T  18984063 agggttaataggcctttaccctcctgcaatataggtcacttttggttttcccccctgt 18984006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 32614600 - 32614551
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttg 150  Q
    |||||||||||| |||||| ||||||||||||| | ||||||||||||||    
T  32614600 agggttaataggcctttacacccctgtaatatatgtcacttttggttttg 32614551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 34762180 - 34762240
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||| ||||||||||||||| || ||||||||||| ||||||||||||||  |||||||||    
T  34762180 tagggctaataggtctttacctcc-tgtaatatagggcacttttggttttgctccctgtaaa 34762240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 21544511 - 21544447
Alignment:
Q  97 atatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||  |||||||||||||||||||||| || ||  ||||||  ||||||||||    
T  21544511 atatagggttaatagtgctttacccccctgtaatataggtcatttccggttttcccccctgtaaa 21544447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 3120396 - 3120346
Alignment:
Q  97 atatagggttaataggtctttacccccctgtaatataggacacttttggttt 148  Q
    |||||||||||||||| ||||| ||||||| |||||||| ||||||||||||    
T  3120396 atatagggttaataggccttta-ccccctgcaatataggtcacttttggttt 3120346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 13498024 - 13497981
Alignment:
Q  93 ttttatatagggttaataggtctttacc-cccctgtaatatagg 135  Q
    |||| ||||||||||||||||||||||| |||||||||||||||    
T  13498024 ttttttatagggttaataggtctttaccccccctgtaatatagg 13497981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 21939121 - 21939180
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||   ||||||||||| |||||||||  |||||||||||||||||| |||||    
T  21939121 agggttaataatgctttaccccccggtaatatagaccacttttggttttgtcccttgtaa 21939180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 149
Target Start/End: Complemental strand, 25400835 - 25400788
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||||||||||||| ||||||||||| || ||| ||||||    
T  25400835 gggttaataggtctttacccccttgtaatataggtcattttcggtttt 25400788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 26644749 - 26644690
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||| ||||  ||||||||||| ||||||||||||  |||||||||||    
T  26644749 atagggttaataggtcttttcccct-tgtaatataggtcacttttggttt--tcccctgtaaa 26644690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 26750715 - 26750656
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||| ||||  ||||||||||| ||||||||||||  |||||||||||    
T  26750715 atagggttaataggtcttttcccct-tgtaatataggtcacttttggttt--tcccctgtaaa 26750656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 32614168 - 32614226
Alignment:
Q  98 tatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctg 157  Q
    ||||||||||||||| |||||||| | ||||||||||| |||||| | ||||||||||||    
T  32614168 tatagggttaataggcctttaccctc-tgtaatataggccactttcgattttgtcccctg 32614226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 161
Target Start/End: Complemental strand, 21227003 - 21226957
Alignment:
Q  115 tttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||| || ||||||||||  ||||||||||    
T  21227003 tttacccccctgtaatataggtcatttttggttttcccccctgtaaa 21226957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 135
Target Start/End: Complemental strand, 33751981 - 33751947
Alignment:
Q  101 agggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||||||||||||||| ||||||||||||    
T  33751981 agggttaataggtctttacccctctgtaatatagg 33751947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 20754632 - 20754572
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||| || |||||||||| ||||||||||| || ||||  ||||||||||||||||    
T  20754632 tagggttaattggcctttaccccc-tgtaatataggtcattttttattttgtcccctgtaaa 20754572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 22365832 - 22365880
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||| ||||||||||||  |||||||| |||||||||||||    
T  22365832 tagggttaataggcctttacccccct-caatataggtcacttttggtttt 22365880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 24602707 - 24602642
Alignment:
Q  96 tatatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||| |||||||| |  |||||||||| ||||||||||| || ||||||||||  ||||||||||    
T  24602707 tatattgggttaatggtgctttacccccatgtaatataggtcatttttggttttcccccctgtaaa 24602642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 1438671 - 1438619
Alignment:
Q  98 tatagggttaataggtctttacccccctgtaatataggacacttttggttttg 150  Q
    |||| ||||||||||| |||||||| |||||||||| | ||||||| ||||||    
T  1438671 tatatggttaataggtttttacccctctgtaatataagtcactttttgttttg 1438619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 7922317 - 7922373
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||| |||| ||||||||||| || |||||||||  |||||||||||    
T  7922317 gggttaataggtctttatcccc-tgtaatataggtcatttttggttt--tcccctgtaaa 7922373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 10366399 - 10366459
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||||||||| |  |||||||||||||||||||||| || |||| |||||  |||||||||    
T  10366399 tagggttaatggtgctttacccccctgtaatataggtcattttttgttttcccccctgtaa 10366459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 21604414 - 21604354
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||||||||| |  |||||||||||||||||||||| || |||| |||||  |||||||||    
T  21604414 tagggttaatggtgctttacccccctgtaatataggtcattttttgttttcccccctgtaa 21604354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 22366276 - 22366229
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||||||||| |||||| |||||||| |||||||| ||||    
T  22366276 agggttaataggtctttac-cccctgcaatataggtcacttttgatttt 22366229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 29942501 - 29942454
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||||||||| ||||||||||||||| || || |||||||    
T  29942501 agggttaataggtctttac-cccctgtaatataggtcatttctggtttt 29942454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 31851757 - 31851816
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||| |||| ||||||||||| || ||| ||||||  ||||||||||    
T  31851757 agggttaataggtctttatcccc-tgtaatataggtcattttcggttttcccccctgtaaa 31851816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 6e-24; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 15060162 - 15060222
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15060162 agggttaataggtctttacccccctgtaatataggacacttttggttttgccccctgtaaa 15060222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 15616558 - 15616498
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15616558 agggttaataggtctttacccccctgtaatataggacacttttggttttgccccctgtaaa 15616498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 11957708 - 11957647
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  11957708 tagggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaa 11957647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 41064142 - 41064203
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  41064142 tagggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaa 41064203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 9750438 - 9750506
Alignment:
Q  93 ttttatatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||| ||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||    
T  9750438 ttttttatagggttaataggcctttacccccttgtaatataggtcacttttggttttgtcccctgtaaa 9750506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 11956138 - 11956198
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  11956138 agggttaataggtctttacccccctgtaatatagggcacttttggttttggcccctgtaaa 11956198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 41065715 - 41065655
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  41065715 agggttaataggtctttacccccctgtaatatagggcacttttggttttggcccctgtaaa 41065655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 21776964 - 21776905
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  21776964 gggttaataggtctttacccctctgtaatatagggcacttttggttttgccccctgtaaa 21776905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 15061883 - 15061822
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  15061883 atagggttaataggtctttaccccc-tgtaatatagggcacttttggttttgccccctgtaaa 15061822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 15615101 - 15615161
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||    
T  15615101 tagggttaataggtctttacccc-ctgtaatatagggcacttttggttttgtccccggtaaa 15615161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 19599969 - 19600024
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccct 156  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||| |||||    
T  19599969 agggttaataggcctttacccccctgtaatataggtcacttttggttttgccccct 19600024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 35599312 - 35599371
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||  |||||||||||||||||||||| |||||||||||||| ||||||||||    
T  35599312 gggttaatagacctttacccccctgtaatataggtcacttttggttttgccccctgtaaa 35599371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 35600595 - 35600537
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||| ||| ||||||    
T  35600595 ggttaataggcctttacccccctgtaatataggtcacttttggttttgccccttgtaaa 35600537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 19601325 - 19601276
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttg 150  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  19601325 agggttaataggcctttacccccctgtaatataggtcacttttggttttg 19601276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 29321367 - 29321306
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||| || | ||||||||||| || ||||||||||||||||||||||    
T  29321367 tagggttaataggtctttatcctcatgtaatataggtcatttttggttttgtcccctgtaaa 29321306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 711233 - 711284
Alignment:
Q  98 tatagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||||||||||||||||||||||||||||| || || |||||||    
T  711233 tatagggttaataggtctttacccccctgtaatataggtcatttatggtttt 711284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 149
Target Start/End: Complemental strand, 6055234 - 6055187
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||    
T  6055234 gggttaataggattttacccccctgtaatataggacacttttggtttt 6055187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 28819537 - 28819594
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||| ||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  28819537 ggttaataggcctttacccc-ctgtaatataggtcacttttggttttgccccctgtaaa 28819594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 9751734 - 9751675
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||  ||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  9751734 agggttaataggcttttaccccc-tgtaatataggtcacttttggttttgccccctgtaaa 9751675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 30798637 - 30798578
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||||||||||||||||||||||||| ||||||||| |||| ||| ||||| |||||||||    
T  30798637 tagggttaataggtctttacccccct-taatatagggcactattgattttgccccctgtaa 30798578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 11890155 - 11890099
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||| |||||||||  ||||||||||| |||||||||||||| |||||||||    
T  11890155 gggttaataggcctttacccc--tgtaatataggtcacttttggttttgccccctgtaa 11890099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 30796579 - 30796637
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||||| ||| ||||||    
T  30796579 gggttaataggtctttaccccc-tataatatagggcacttttggttttgccccttgtaaa 30796637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 135
Target Start/End: Complemental strand, 711517 - 711483
Alignment:
Q  101 agggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||||||||||||||||||||||||||||    
T  711517 agggttaataggtctttacccccctgtaatatagg 711483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 9227141 - 9227083
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||| ||||||||||||||| || || |||||||  ||||||||||    
T  9227141 ggttaataggtctttacacccctgtaatataggtcatttctggttttcccccctgtaaa 9227083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 10011619 - 10011676
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||| ||||| ||||    
T  10011619 ggttaataggtctttatcccg-tgtaatataggacacttttggttttgccccctctaaa 10011676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 13948638 - 13948581
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||| ||||||| || ||||||||||| |||||||||||||| ||||||||||    
T  13948638 ggttaataggcctttacctcc-tgtaatatagggcacttttggttttgccccctgtaaa 13948581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 33053109 - 33053071
Alignment:
Q  97 atatagggttaataggtctttacccccctgtaatatagg 135  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  33053109 atattgggttaataggtctttacccccctgtaatatagg 33053071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 33658871 - 33658929
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||| || ||  ||||||  ||||||||||    
T  33658871 ggttaataggtctttacccccctgtaatataggtcatttccggttttcccccctgtaaa 33658929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 135
Target Start/End: Original strand, 39153415 - 39153449
Alignment:
Q  101 agggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||||||||||||||||||||||||||||    
T  39153415 agggttaataggtctttacccccctgtaatatagg 39153449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 9673189 - 9673128
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||| |  |||||||||||||||||||||| || ||||||||||  ||||||||||    
T  9673189 tagggttaatcgtgctttacccccctgtaatataggtcatttttggttttcccccctgtaaa 9673128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 22642384 - 22642347
Alignment:
Q  98 tatagggttaataggtctttacccccctgtaatatagg 135  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  22642384 tatagggttaataggtctttacccctctgtaatatagg 22642347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 28820615 - 28820554
Alignment:
Q  101 agggttaatagg-tctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||| ||||  ||||||||||||||||| |||||||| ||||| ||||||||||    
T  28820615 agggttaataggctcttaccccccctgtaatataggtcacttttgattttgccccctgtaaa 28820554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 135
Target Start/End: Complemental strand, 39419009 - 39418976
Alignment:
Q  102 gggttaataggtctttacccccctgtaatatagg 135  Q
    ||||||||||||||||||||||||||||||||||    
T  39419009 gggttaataggtctttacccccctgtaatatagg 39418976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 5699754 - 5699802
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||  |||||||||||| |||||||| |||||||||||||    
T  5699754 agggttaataggcttttacccccctgcaatataggtcacttttggtttt 5699802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 15395534 - 15395589
Alignment:
Q  92 tttttatatagggttaataggtctttacccccctgtaatataggacacttttggttt 148  Q
    ||||||| |||||||||||||| |||| |||||||||| ||||| ||||||||||||    
T  15395534 tttttatttagggttaataggttttta-ccccctgtaaaataggtcacttttggttt 15395589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 18229748 - 18229796
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||||||||| ||||||||||||||| || ||| ||||||    
T  18229748 agggttaataggtctttacacccctgtaatataggtcattttcggtttt 18229796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 195
Target Start/End: Complemental strand, 10012863 - 10012770
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa-annnnnnnnnagatttcgtccttgtaaaatgaaga 195  Q
    ||||||||||||||||| || | |||||||||||  ||||||||||||||||||| ||| |         |||||||||||||||||||||||||    
T  10012863 gggttaataggtctttatcctc-tgtaatatagggtacttttggttttgtcccctataatatttttttttagatttcgtccttgtaaaatgaaga 10012770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 160
Target Start/End: Original strand, 13947734 - 13947773
Alignment:
Q  121 cccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  13947734 cccctgtaatataagacgcttttggttttgtcccctgtaa 13947773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 21149156 - 21149100
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||  ||||||||||| || |||||||||| | |||||||||    
T  21149156 ggttaataggtctttacccc--tgtaatataggtcatttttggttttcttccctgtaaa 21149100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 149
Target Start/End: Complemental strand, 16504999 - 16504957
Alignment:
Q  107 aataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||||||||||||||||||| || ||| ||||||    
T  16504999 aataggtctttacccccctgtaatataggtcattttcggtttt 16504957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 889066 - 889114
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||||||||| |||| ||||||||||| ||| |||||||||    
T  889066 tagggttaataggtcttta-ccccttgtaatataggccacatttggtttt 889114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 2870643 - 2870707
Alignment:
Q  96 tatatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||| |||||||||||||||||| || ||||||||||||  || ||| |||||| |||||||||||    
T  2870643 tataaagggttaataggtctttaacctcctgtaatatagatcattttcggtttt-tcccctgtaaa 2870707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 10976808 - 10976772
Alignment:
Q  98 tatagggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||||||||||||||| |||||||||||||||    
T  10976808 tatagggttaataggtctttac-cccctgtaatatagg 10976772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 11438337 - 11438397
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||  ||||||||| ||||||||||||  |||||||||||||  |||||||||    
T  11438337 tagggttaatagagctttacccc-ctgtaatatagggtacttttggttttgctccctgtaaa 11438397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 29754046 - 29754107
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||| ||||||||||||| ||||||||| || ||  ||||||  ||||||||||    
T  29754046 tagggttaatagatctttacccccctataatataggtcatttccggttttcccccctgtaaa 29754107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 23932521 - 23932466
Alignment:
Q  93 ttttatatagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||| || ||||||||||||||| |||| || |||||||| |||||||||||||    
T  23932521 ttttataaagtgttaataggtctttatcccc-tgcaatataggtcacttttggtttt 23932466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 26034844 - 26034903
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||| ||| ||| |||||||| || ||||||||||  ||||||||||    
T  26034844 agggttaataggtcttta-ccctctgcaatataggtcatttttggtttttccccctgtaaa 26034903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 33659166 - 33659130
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatatagg 135  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  33659166 atagggttaataggtatttacccccttgtaatatagg 33659130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 38482317 - 38482364
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||||||||| |||||||||||||||| || || |||||||    
T  38482317 agggttaataggtcttta-ccccctgtaatataggtcaattctggtttt 38482364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 1902926 - 1902989
Alignment:
Q  98 tatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  1902926 tatagggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaa 1902989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 22466982 - 22467040
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22466982 ggttaataggtctttacccccctgtaatataggtcacttttggttttgtcccctgtaaa 22467040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 23834580 - 23834639
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  23834580 agggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaa 23834639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 1904468 - 1904410
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgt 158  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  1904468 tagggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgt 1904410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 22468284 - 22468223
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||    
T  22468284 tagggttaataggcctttacccccctgtaatataggtcacttttggttttgccccctgtaaa 22468223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 22474505 - 22474444
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||    
T  22474505 tagggttaataggcctttacccccctgtaatataggtcacttttggttttgccccctgtaaa 22474444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 7577835 - 7577775
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  7577835 agggttaataggtctttacccccctgtaatatagggcacttttggttttaccccctgtaaa 7577775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 7576325 - 7576384
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||    
T  7576325 gggttaataggtctttatccccctgtaatatagggcacttttggttttgccccctgtaaa 7576384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 18249629 - 18249690
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||||||| ||||||||    
T  18249629 tagggttaataggtctttacccccttgtaatatatggcacttttggttttgtctcctgtaaa 18249690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 38875991 - 38876047
Alignment:
Q  105 ttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  38875991 ttaatagggctttacccccctgtaatataggacacttttggtttttccccctgtaaa 38876047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 18250948 - 18250889
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||| | |||||||    
T  18250948 agggttaataggtctttacccccctgtaatatagggcatttttggttttgcctcctgtaa 18250889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 44366867 - 44366926
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||| | |||||||||||||| |||||||||||||| ||||||||||    
T  44366867 gggttaataggtctttaactccctgtaatatagggcacttttggttttgccccctgtaaa 44366926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 38937568 - 38937507
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||    
T  38937568 atagggttaataggtctttaccccc-tgtaatatagggcacttttggttttgccccctataaa 38937507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 16670500 - 16670556
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||    
T  16670500 ggttaataggtctttacccc-ctgtaatatagggcacttttggttttgccccctgtaa 16670556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 23835830 - 23835771
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||    
T  23835830 agggttaataggtctttaccccc-tgtaatatagggcacttttagttttgccccctgtaaa 23835771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 28462552 - 28462492
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||||||||  |||||||||    
T  28462552 agggttaataggcctttatccccctgtaatataggtcacttttggttttgcaccctgtaaa 28462492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 38935945 - 38936002
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||| || |||||||    
T  38935945 gggttaataggtctttacccc--tgtaatataggacacttttggttttgcccactgtaaa 38936002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 38815150 - 38815091
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||| ||||||||||||| | |||||||||||||| || |||||||    
T  38815150 gggttaataggtctttactcccctgtaatataaggcacttttggttttgccctctgtaaa 38815091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 18701852 - 18701811
Alignment:
Q  94 tttatatagggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  18701852 tttatatagggttaataggtctttacccccttgtaatatagg 18701811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 19684220 - 19684261
Alignment:
Q  120 ccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  19684220 ccccctgtaatatatgacacttttggttttgtcccctgtaaa 19684261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 25227821 - 25227882
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||| ||||||||||||| || || |||||||  ||||||||||    
T  25227821 tagggttaataggtctttaccctcctgtaatataggtcatttctggttttcccccctgtaaa 25227882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 85438 - 85497
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||| ||||||||||| || ||| |||||| |||||||||||    
T  85438 agggttaataggtctttacccccttgtaatataggtcattttcggtttt-tcccctgtaaa 85497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 15747750 - 15747809
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||  ||||||||| |||||||||||| ||||||||||||||| |||||||||    
T  15747750 agggttaatagacctttacccc-ctgtaatataggtcacttttggttttgttccctgtaaa 15747809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 21903922 - 21903982
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||| || |||||| ||||||||||||||| |||||||||||||  ||||||||||    
T  21903922 agggttaatggggctttacacccctgtaatatagggcacttttggttttcccccctgtaaa 21903982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 44241096 - 44241155
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||| |||||| ||| ||||||||||| || ||||||||||||||||||||||    
T  44241096 agggttaataggactttactccc-tgtaatataggtcatttttggttttgtcccctgtaaa 44241155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 135
Target Start/End: Complemental strand, 34636002 - 34635967
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatatagg 135  Q
    ||||||||||||||||||||||||||||||||||||    
T  34636002 tagggttaataggtctttacccccctgtaatatagg 34635967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 33868470 - 33868516
Alignment:
Q  97 atatagggttaataggtctttacccccctgtaatataggacactttt 143  Q
    |||||||||||||||||||||| || ||||||||||||| |||||||    
T  33868470 atatagggttaataggtctttatcctcctgtaatataggtcactttt 33868516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 30371383 - 30371443
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||| ||| ||||||||||| || ||||||||||  ||||||||||    
T  30371383 tagggttaataggtctttactccc-tgtaatataggtcatttttggttttcccccctgtaaa 30371443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 15481488 - 15481536
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||||    
T  15481488 agggttaataggcctttatccccctgcaatataggtcacttttggtttt 15481536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 133
Target Start/End: Original strand, 18555575 - 18555607
Alignment:
Q  101 agggttaataggtctttacccccctgtaatata 133  Q
    |||||||||||||||||||||||||||||||||    
T  18555575 agggttaataggtctttacccccctgtaatata 18555607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 31108345 - 31108405
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||| |  |||||||||||||||||||||| || ||||||||||  ||||||||||    
T  31108345 agggttaatggtgctttacccccctgtaatataggtcatttttggttttcccccctgtaaa 31108405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 43015240 - 43015200
Alignment:
Q  121 cccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  43015240 cccctgtaatataggtcatttttggttttgtcccctgtaaa 43015200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 19686237 - 19686183
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccct 156  Q
    |||||||||||  |||||||||| ||||||||||| |||||||||||||| |||||    
T  19686237 agggttaatagtgctttaccccc-tgtaatatagggcacttttggttttgccccct 19686183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 22116151 - 22116201
Alignment:
Q  98 tatagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||||||||||| |||||||||||||||| || ||| ||||||    
T  22116151 tatagggttaataggtcttta-ccccctgtaatataggtcattttcggtttt 22116201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 149
Target Start/End: Original strand, 28149433 - 28149480
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||||||||||| |||||||||||| || || |||||||    
T  28149433 gggttaataggtctttacccctctgtaatataggtcatttctggtttt 28149480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 35337181 - 35337135
Alignment:
Q  114 ctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||| || |||||||||| |||||||||||    
T  35337181 ctttacccccctgtaatataggtcatttttggtttt-tcccctgtaaa 35337135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 38877082 - 38877032
Alignment:
Q  98 tatagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||||| |||||||||| ||||||||| | |||||||||||||    
T  38877082 tatagggttaatagggctttaccccc-tgtaatataaggcacttttggtttt 38877032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 44242412 - 44242354
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||| ||||||| || ||||||||||  |||||||||||||| ||||||||||    
T  44242412 gggttaataggcctttacctcc-tgtaatatagatcacttttggttttgccccctgtaaa 44242354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 5970810 - 5970763
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgt 151  Q
    |||||||||||||||||||||  |||||||||||  ||||||||||||||    
T  5970810 gggttaataggtctttacccc--tgtaatatagggtacttttggttttgt 5970763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 12693869 - 12693811
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||| |||| |||||| || |||| ||||| || ||||||||    
T  12693869 ggttaataggtctttacccccttgtagtataggtcattttttgttttttctcctgtaaa 12693811  T

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Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 19493508 - 19493459
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||||||||||| ||||||||||||||| || ||| ||||||    
T  19493508 atagggttaataggtctttac-cccctgtaatataggtcattttcggtttt 19493459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 37147842 - 37147796
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||||||||||| |||||||||||| || || |||||||    
T  37147842 ggttaataggtctttaccccactgtaatataggtcatttctggtttt 37147796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 38210865 - 38210922
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||| ||||||||||||  | || ||||||| |||||||||||    
T  38210865 ggttaataggtctttacccc-ctgtaatataggtaatttctggttttctcccctgtaaa 38210922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 15809430 - 15809374
Alignment:
Q  104 gttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||| |||| || |||||||| |||||||||||||  ||||||||||    
T  15809430 gttaataggtctttatcccc-tgcaatataggtcacttttggttttcacccctgtaaa 15809374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 28461066 - 28461125
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||| | |||||||||| ||||||||||| | |||||||||||| ||||||||||    
T  28461066 tagggttaataagcctttaccccc-tgtaatataggtc-cttttggttttggcccctgtaaa 28461125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 31551907 - 31551956
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||  |||||||||| ||||||||||  |||||||||||||    
T  31551907 tagggttaatagagctttacccccttgtaatatagagcacttttggtttt 31551956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 34635704 - 34635764
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||| |||||||||||||||| || ||  ||||||  ||||||||||    
T  34635704 tagggttaataggtcttta-ccccctgtaatataggtcatttccggttttcccccctgtaaa 34635764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 34831489 - 34831550
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||   |||| |||||||||||||| | || ||||||||||| ||||||||||    
T  34831489 tagggttaatagtgttttatccccctgtaatatatgtcatttttggttttgccccctgtaaa 34831550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 39341283 - 39341324
Alignment:
Q  120 ccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||| || |||||||||| |||||||||||    
T  39341283 ccccctgtaatataggtcatttttggttttctcccctgtaaa 39341324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 41305879 - 41305937
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||||||||||||||||||  ||||||||||||||| | ||||||||| || || ||||||    
T  41305879 tagggttaataggtcttta--cccctgtaatatagggcgcttttggttctgccctctgtaa 41305937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 1499168 - 1499112
Alignment:
Q  105 ttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||| ||||||||||||||||| |||||||| || ||| ||||||  ||||||||||    
T  1499168 ttaaaaggtctttacccccctgaaatataggtcattttcggttttcccccctgtaaa 1499112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 4024874 - 4024930
Alignment:
Q  105 ttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||| ||||||||| ||| |||||||| || |||| ||||| |||||||||||    
T  4024874 ttaataggcctttacccctctgcaatataggtcattttttgttttctcccctgtaaa 4024930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 8238006 - 8238046
Alignment:
Q  120 ccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||| |||||||||| ||||||||||||||| |||||||||    
T  8238006 ccccatgtaatatagaacacttttggttttgccccctgtaa 8238046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 15808728 - 15808772
Alignment:
Q  105 ttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||||| ||||||  |||||||| |||||||||||||    
T  15808728 ttaataggtctttatccccctacaatataggtcacttttggtttt 15808772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 17328091 - 17328150
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||| |||||||||||||||| || ||  ||||||  ||||||||||    
T  17328091 agggttaataggtcttta-ccccctgtaatataggtcatttccggttttcccccctgtaaa 17328150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 22829400 - 22829364
Alignment:
Q  97 atatagggttaataggtctttacccccctgtaatata 133  Q
    |||||||||||||||||||||| || |||||||||||    
T  22829400 atatagggttaataggtctttatcctcctgtaatata 22829364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 28141691 - 28141734
Alignment:
Q  105 ttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||| |||||||||| |||||||||||| |||||||||||||    
T  28141691 ttaatagatctttacccc-ctgtaatataggtcacttttggtttt 28141734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 39150243 - 39150282
Alignment:
Q  120 ccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  39150243 ccccctgtaatataggactcttttggttttg-cccctgtaa 39150282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 45161420 - 45161380
Alignment:
Q  121 cccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||| |||||||||||||| | ||||||||    
T  45161420 cccctgtaatatagggcacttttggttttgcctcctgtaaa 45161380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 133
Target Start/End: Complemental strand, 45323951 - 45323919
Alignment:
Q  101 agggttaataggtctttacccccctgtaatata 133  Q
    |||||||||||| ||||||||||||||||||||    
T  45323951 agggttaataggcctttacccccctgtaatata 45323919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 34739885 - 34739947
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  34739885 atagggttaataggtctttacccccctgtaatatagggcacttttggttttggcccctgtaaa 34739947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 55500465 - 55500405
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  55500465 tagggttaataggtctttacccccctgtaatataggacatttttggttttgccccctgtaa 55500405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 34741453 - 34741392
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  34741453 taggcttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaa 34741392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 29249768 - 29249708
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  29249768 agggttaataggtctttacccccctgtaatatagggaacttttggttttgccccctgtaaa 29249708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 12566996 - 12566937
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  12566996 gggttaataggtctttacccccttgtaatatagggcacttttggttttgccccctgtaaa 12566937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 20963757 - 20963698
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||    
T  20963757 gggttaataggtctttacccccctgtaatatagggcacttttggctttgccccctgtaaa 20963698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 21994328 - 21994384
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  21994328 ggttaataggtctttacccc-ctgtaatataggacacttttgattttgtcccctgtaa 21994384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 54554376 - 54554440
Alignment:
Q  95 ttatatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||| |||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||    
T  54554376 ttataaagggttaataggtctttacccc-ctgtaatatagggcacttttggttttgccccctgtaa 54554440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 17696032 - 17695972
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||||  |||||||||||||||||||| |||||||||||||||| |||||||||    
T  17696032 tagggttaatagtcctttacccccctgtaatataagacacttttggttttgccccctgtaa 17695972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 50881480 - 50881421
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  50881480 agggttaataggtctttaccccc-tgtaatataggccacttttggttttgccccctgtaaa 50881421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 15695239 - 15695178
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||||||||||||||||||||||||||||| ||||   |||||||||||||| |||||||||    
T  15695239 atagggttaataggtctttacccccctgtattatacaccacttttggttttgccccctgtaa 15695178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 29248241 - 29248288
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29248241 agggttaataggtctttacccc-ctgtaatataggacacttttggtttt 29248288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 43860971 - 43860912
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||| || ||||||||||| |||||||||||||||| ||||||||    
T  43860971 agggttaataggtctttacctcc-tgtaatatagggcacttttggttttgtctcctgtaaa 43860912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 9410340 - 9410281
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||   |||||||| |||||||||||| |||||||||||||||||||||||||    
T  9410340 gggttaatagtgttttacccctctgtaatatagggcacttttggttttgtcccctgtaaa 9410281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 21798330 - 21798389
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgta 159  Q
    |||||||||||||||||||||||||||||||||||| || || |||||||  ||||||||    
T  21798330 tagggttaataggtctttacccccctgtaatataggtcatttctggttttaccccctgta 21798389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 34027251 - 34027193
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||| |||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  34027251 gggttaataggcctttaccccc-tgtaatataggtcacttttggttttgccccctgtaaa 34027193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 13334823 - 13334881
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||| || || |||||||  ||||||||||    
T  13334823 ggttaataggtctttacccccctgtaatataggtcatttctggttttcccccctgtaaa 13334881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 54354248 - 54354190
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||| ||||||||||||| |||||||| |||||||||||||  |||||||||    
T  54354248 gggttaataggcctttacccccctgcaatataggtcacttttggttttcccccctgtaa 54354190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 11563576 - 11563516
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||||| ||||||||||| || || ||||||| |||||||||||    
T  11563576 tagggttaataggtctttaccccc-tgtaatataggtcatttctggttttttcccctgtaaa 11563516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 13910911 - 13910850
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||    
T  13910911 tagggttaatggtgctttacccccctgtaatataggtcatttttggttttctcccctgtaaa 13910850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 17289740 - 17289801
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||| ||||||| |||||||| || ||||||||||  ||||||||||    
T  17289740 tagggttaataggtctttatccccctgaaatataggtcatttttggttttcccccctgtaaa 17289801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 34025912 - 34025972
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||  |||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  34025912 tagggttaatagacctttacccccttgtaatataggtcacttttggttttg-cccctgtaaa 34025972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 18454191 - 18454251
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||||| || ||  ||||||  ||||||||||    
T  18454191 agggttaataggtctttacccccctgtaatataggtcatttccggttttcacccctgtaaa 18454251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 20962193 - 20962252
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||| |||||||||| |||||||||| | |||||||||||||| ||||||||||    
T  20962193 agggttaatagatctttacccc-ctgtaatatatggcacttttggttttgccccctgtaaa 20962252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 24215799 - 24215740
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||| ||||||||||| || || ||||||| |||||||||||    
T  24215799 agggttaataggtctttaccccc-tgtaatataggtcatttctggttttctcccctgtaaa 24215740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 51752686 - 51752741
Alignment:
Q  105 ttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||| |||||||||| |||||||||| ||||| ||||||||||    
T  51752686 ttaataggtctttacccc-ctgtaatatatgacacttttgattttgccccctgtaaa 51752741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 135
Target Start/End: Original strand, 5401759 - 5401794
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatatagg 135  Q
    ||||||||||||||||||||||||||||||||||||    
T  5401759 tagggttaataggtctttacccccctgtaatatagg 5401794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 135
Target Start/End: Complemental strand, 18454489 - 18454454
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatatagg 135  Q
    ||||||||||||||||||||||||||||||||||||    
T  18454489 tagggttaataggtctttacccccctgtaatatagg 18454454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 54555408 - 54555350
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||| |||||||||||| ||||||||| | |||||||||||||| ||||||||||    
T  54555408 gggttaataagtctttaccccc-tgtaatatatggcacttttggttttgccccctgtaaa 54555350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 135
Target Start/End: Complemental strand, 18320754 - 18320720
Alignment:
Q  101 agggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||||||||||||||||||||||||||||    
T  18320754 agggttaataggtctttacccccctgtaatatagg 18320720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 144
Target Start/End: Original strand, 45900528 - 45900570
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttg 144  Q
    |||||||||||||||||||||||||||||||||| || |||||    
T  45900528 gggttaataggtctttacccccctgtaatataggtcatttttg 45900570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 21246474 - 21246523
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||||||||||| ||||||||||||||| || ||| ||||||    
T  21246474 tagggttaataggtctttacacccctgtaatataggtcattttcggtttt 21246523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 11862085 - 11862026
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||||| ||||||||   |||||||||| ||||||||||||||| |||||||||    
T  11862085 tagggttaataggcctttaccctt-tgtaatatagaacacttttggttttgccccctgtaa 11862026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 20612961 - 20613024
Alignment:
Q  97 atatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||| |||||||| |||||||||| || |||||||| |||||||||||||  ||||||||||    
T  20612961 atataggattaataggcctttaccccc-tgcaatataggtcacttttggttttcccccctgtaaa 20613024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 51162076 - 51162136
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||| ||||| |||||| ||||||||| |||||||| ||||| ||||| ||||    
T  51162076 agggttaataggcctttatccccctataatataggtcacttttgattttgccccctctaaa 51162136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 51164075 - 51164020
Alignment:
Q  104 gttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||| |||||||||| | ||||||||| |||||||||||||| |||||||||    
T  51164075 gttaataggcctttaccccc-tataatataggtcacttttggttttgccccctgtaa 51164020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 54053560 - 54053628
Alignment:
Q  93 ttttatatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||| |||||||||| | ||||| ||| ||||||||||||  ||||||| ||||| ||||||||||    
T  54053560 ttttataaagggttaataagcctttaaccctctgtaatataggttacttttgattttgccccctgtaaa 54053628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 55499249 - 55499309
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||| ||||||||||| || |||||| | |||||||||| ||||| ||||||||||    
T  55499249 agggttaatcggtctttaccctccggtaatacatgacacttttgattttgccccctgtaaa 55499309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 145253 - 145210
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttg 144  Q
    |||||||||||||||||| |||||||||||||| | ||||||||    
T  145253 agggttaataggtctttatccccctgtaatataagtcacttttg 145210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 550673 - 550731
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||| |||||||||||||||| || |||| |||||| ||| ||||||    
T  550673 gggttaataggtcttta-ccccctgtaatataggtcatttttagttttgccccttgtaaa 550731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 149
Target Start/End: Complemental strand, 19876028 - 19875981
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||||||| |||||||||||||||| || ||| ||||||    
T  19876028 gggttaataggtctttaaccccctgtaatataggtcattttcggtttt 19875981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 149
Target Start/End: Complemental strand, 21780413 - 21780366
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||||||||| |||||||||||||| || || |||||||    
T  21780413 gggttaataggtctttacctccctgtaatataggtcatttctggtttt 21780366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 49629634 - 49629687
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccct 156  Q
    |||||||||||  |||||||||| ||||| ||||||||||||||||||||||||||    
T  49629634 agggttaatagacctttaccccc-tgtaa-ataggacacttttggttttgtcccct 49629687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 50138488 - 50138546
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||| |||||||||||||||| || ||| ||||||  ||||||||||    
T  50138488 gggttaataggtcttta-ccccctgtaatataggtcattttcggtttttccccctgtaaa 50138546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 50879906 - 50879956
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatataggacacttttggttttg 150  Q
    |||||||||||||||||||||  || ||||||||||| ||||||||||||||    
T  50879906 atagggttaataggtctttacttcc-tgtaatataggccacttttggttttg 50879956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 7272266 - 7272324
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||||||||||||||||||||| |||||||||||  | ||| ||||||  |||||||||    
T  7272266 gggttaataggtctttacccccttgtaatataggttattttcggttttcccccctgtaa 7272324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 49552008 - 49552054
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||| ||||||||||||  |||||||| |||||||||||||    
T  49552008 ggttaataggcctttacccccctcaaatataggtcacttttggtttt 49552054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 51754258 - 51754201
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgta 159  Q
    |||||||||||  |||||||||| |||||||||||  ||||||||||||||| ||||||    
T  51754258 agggttaatagagctttaccccc-tgtaatatagggtacttttggttttgtcacctgta 51754201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 53231768 - 53231831
Alignment:
Q  96 tatatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||| ||||||| ||||||||||  ||||||||||| || |||||||||| ||| |||||||    
T  53231768 tatataggattaatagatctttacccc--tgtaatataggtcatttttggttttttcctctgtaaa 53231831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 135
Target Start/End: Complemental strand, 5402055 - 5402022
Alignment:
Q  102 gggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||||||||||||||| |||||||||||    
T  5402055 gggttaataggtctttacccccttgtaatatagg 5402022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 12352514 - 12352470
Alignment:
Q  104 gttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||| |||||||||| ||||||||||| |||||||||||||    
T  12352514 gttaataggcctttaccccc-tgtaatataggtcacttttggtttt 12352470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 135
Target Start/End: Original strand, 19875744 - 19875777
Alignment:
Q  102 gggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||| |||||||||||||||||||||||    
T  19875744 gggttaatagctctttacccccctgtaatatagg 19875777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 41331767 - 41331815
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||||||||| |||| || |||||||| |||||||||||||    
T  41331767 tagggttaataggtctttatcccc-tgcaatataggtcacttttggtttt 41331815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 9136443 - 9136403
Alignment:
Q  121 cccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  9136443 cccctgtaatatagatcacttttggttttgccccctgtaaa 9136403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 21780121 - 21780168
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||||||||| |||||||||||||||| || ||| ||||||    
T  21780121 agggttaataggtcttta-ccccctgtaatataggtcattttcggtttt 21780168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 38656113 - 38656054
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||| ||||| ||||||||| || |||| ||||| ||| |||||||    
T  38656113 agggttaataggtctttac-cccctataatataggtcattttttgttttttccactgtaaa 38656054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 40479575 - 40479516
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||||||| ||| || | |||||||||||  |||||||||||||||| ||||||    
T  40479575 tagggttaataggtcattatcctc-tgtaatatagggtacttttggttttgtcctctgtaa 40479516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 8080 - 8140
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8080 tagggttaataggtctttacccccctgtaatataggacacttttggttttg-cccctgtaaa 8140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 15662 - 15722
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15662 tagggttaataggtctttacccccctgtaatataggacacttttggttttg-cccctgtaaa 15722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 25614 - 25674
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25614 tagggttaataggtctttacccccctgtaatataggacacttttggttttg-cccctgtaaa 25674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 66103 - 66042
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  66103 tagggttaataggtctttacccccctgtaatatatgacacttttggttttgccccctgtaaa 66042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 64503 - 64561
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  64503 gggttaataggtctttacccccctgtaatatagggtacttttggttttgccccctgtaa 64561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 39810146 - 39810085
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  39810146 tagggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaa 39810085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 27163115 - 27163175
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  27163115 agggttaataggtctttacccccctgtaatatagggcacttttggttttggcccctgtaaa 27163175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 42348961 - 42349019
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  42348961 gggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaa 42349019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 31985009 - 31985065
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccct 156  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||    
T  31985009 tagggttaataggtctttacctccctgtaatataggtcacttttggttttgccccct 31985065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 42350236 - 42350176
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||||| ||||||||||    
T  42350236 agggttaataggtctttacccccctgtaatatagagcatttttggttttgccccctgtaaa 42350176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 1601314 - 1601253
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| ||||| ||||||||||    
T  1601314 atagggttaataggcctttacccccctctaatataggacacttttgattttg-cccctgtaaa 1601253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 27164714 - 27164657
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  27164714 ggttaataggtctttaccccc-tgtaatatagggcacttttggttttgccccctgtaaa 27164657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 39513861 - 39513925
Alignment:
Q  96 tatatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||  |||||||| |||||||||||| |||||||||||||| ||||||||||    
T  39513861 tatatagggttaataggcatttacccc-ctgtaatataggtcacttttggttttgccccctgtaaa 39513925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 31986287 - 31986227
Alignment:
Q  102 gggttaataggtctttacccccc-tgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||    
T  31986287 gggttaataggtctttaccccccgtgtaatataggtcacttttagttttgccccctgtaaa 31986227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 39808649 - 39808706
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||    
T  39808649 gggttaataggtctttacccc--tgtaatatagggcacttttggttttgccccctgtaaa 39808706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 2270348 - 2270290
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||    
T  2270348 gggttaataggtctttaccccc-tgtattataggtcacttttggttttgccccctgtaaa 2270290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 6819195 - 6819254
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||| ||||||||||||| |||||||| |||||||||||||  ||||||||||    
T  6819195 gggttaataggcctttacccccctgcaatataggtcacttttggttttcccccctgtaaa 6819254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 1601671 - 1601732
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||  ||||||||| |||||||||||| |||||||||||||| ||||| ||||    
T  1601671 tagggttaatagacctttacccctctgtaatatagggcacttttggttttgccccctataaa 1601732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 28575171 - 28575122
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  28575171 tagggttaataggactttaccaccctgtaatatagggcacttttggtttt 28575122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 2269042 - 2269090
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttg 150  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  2269042 gggttaataggtctttacctccttgtaatataggtcacttttggttttg 2269090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 27543410 - 27543458
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||||||||||||||||||||||||| || ||| ||||||    
T  27543410 agggttaataggtctttacccccctgtaatataggtcattttcggtttt 27543458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 40702068 - 40702009
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||| |||||||||| ||||||||||| ||||||| |||||| ||||||||||    
T  40702068 agggttaataggcctttaccccc-tgtaatataggtcacttttcgttttgccccctgtaaa 40702009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 1600077 - 1600135
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||| |||||||||| | |||||||||||||| ||||| ||||    
T  1600077 gggttaataggtctttacccc-ctgtaatataagccacttttggttttgccccctataaa 1600135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 161
Target Start/End: Complemental strand, 9768349 - 9768303
Alignment:
Q  115 tttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||| |||||||||||||||| |||||||| ||||||||||||||||    
T  9768349 tttagccccctgtaatataggtcacttttgattttgtcccctgtaaa 9768303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 34901503 - 34901560
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||  |||||||| |||||||||||| |||||||||||||| ||||||||||    
T  34901503 ggttaataggcttttacccc-ctgtaatataggtcacttttggttttgccccctgtaaa 34901560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 6820140 - 6820087
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtccc 154  Q
    |||||||||||| ||||||||||||| |||||||| ||||||| ||||| ||||    
T  6820140 agggttaataggcctttacccccctgcaatataggtcacttttagttttctccc 6820087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 134
Target Start/End: Complemental strand, 24971236 - 24971203
Alignment:
Q  101 agggttaataggtctttacccccctgtaatatag 134  Q
    ||||||||||||||||||||||||||||||||||    
T  24971236 agggttaataggtctttacccccctgtaatatag 24971203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 5703055 - 5703099
Alignment:
Q  105 ttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||| |||||||||||||||||||||| ||||||| |||||    
T  5703055 ttaatagggctttacccccctgtaatatagggcacttttagtttt 5703099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 11424395 - 11424335
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||| |  |||||||||||||||||||||| || ||||||||||  ||||||||||    
T  11424395 agggttaatggtgctttacccccctgtaatataggtcatttttggttttcccccctgtaaa 11424335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 133
Target Start/End: Original strand, 24970962 - 24970994
Alignment:
Q  101 agggttaataggtctttacccccctgtaatata 133  Q
    |||||||||||||||||||||||||||||||||    
T  24970962 agggttaataggtctttacccccctgtaatata 24970994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 31343359 - 31343411
Alignment:
Q  97 atatagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||| |  |||||||||||||||||||||| || ||||||||||    
T  31343359 atatagggttaatggtgctttacccccctgtaatataggtcatttttggtttt 31343411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 133
Target Start/End: Original strand, 25277472 - 25277503
Alignment:
Q  102 gggttaataggtctttacccccctgtaatata 133  Q
    ||||||||||||||||||||||||||||||||    
T  25277472 gggttaataggtctttacccccctgtaatata 25277503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 133
Target Start/End: Original strand, 41565270 - 41565301
Alignment:
Q  102 gggttaataggtctttacccccctgtaatata 133  Q
    ||||||||||||||||||||||||||||||||    
T  41565270 gggttaataggtctttacccccctgtaatata 41565301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 20076445 - 20076383
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||| |  ||||| |||||||||||||||| || ||||||||||  ||||||||||    
T  20076445 atagggttaatggtactttatccccctgtaatataggtcatttttggttttcccccctgtaaa 20076383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 40701347 - 40701404
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||| ||||||||||| |||||||||||||| |||||| | ||||| ||||||||||    
T  40701347 ggttaacaggtctttaccgccctgtaatataggtcactttcgtttttg-cccctgtaaa 40701404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 135
Target Start/End: Original strand, 3912256 - 3912289
Alignment:
Q  102 gggttaataggtctttacccccctgtaatatagg 135  Q
    ||||||| ||||||||||||||||||||||||||    
T  3912256 gggttaacaggtctttacccccctgtaatatagg 3912289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 4105337 - 4105279
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||  ||||||||||||||| || |||| ||||| ||| |||||||    
T  4105337 agggttaataggtcttta--cccctgtaatataggtcattttttgttttctcctctgtaaa 4105279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 5160559 - 5160498
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||| |  |||||||||||||||||||||| || |||| |||||  ||||||||||    
T  5160559 tagggttaatggtgctttacccccctgtaatataggtcattttttgttttcccccctgtaaa 5160498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 11106009 - 11105949
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||| |  |||||||||||||||||||||| || |||| ||||| |||||||||||    
T  11106009 tagggttaatggtgctttacccccctgtaatataggtcattttttgtttt-tcccctgtaaa 11105949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 14329667 - 14329611
Alignment:
Q  92 tttttatatagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||| || ||||||||||||||||||| ||||||||||||||| || ||| ||||||    
T  14329667 tttttttacagggttaataggtctttac-cccctgtaatataggtcattttcggtttt 14329611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 34985381 - 34985333
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||||||||||| ||||||||||||||| || || |||||||    
T  34985381 tagggttaataggtctttac-cccctgtaatataggtcatttctggtttt 34985333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 39515181 - 39515121
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||| |||||| ||| ||||||||||| ||||||||||||   ||||||||||    
T  39515181 tagggttaataggcctttactccc-tgtaatataggtcacttttggtttgaccccctgtaaa 39515121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 135
Target Start/End: Original strand, 43978565 - 43978598
Alignment:
Q  102 gggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||||||||||||||| |||||||||||    
T  43978565 gggttaataggtctttacccccgtgtaatatagg 43978598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 7988791 - 7988839
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||| |||||||| |||||||||| |||| |||| |||||    
T  7988791 agggttaataggtatttacccctctgtaatatatgacattttttgtttt 7988839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 10710509 - 10710541
Alignment:
Q  103 ggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||||||||||||| ||||||||||||    
T  10710509 ggttaataggtctttacccctctgtaatatagg 10710541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 16093608 - 16093665
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||| ||| ||||||||||| || |||| ||||  |||||||||||    
T  16093608 gggttaataggtctttacacccttgtaatataggtcattttttgttt--tcccctgtaaa 16093665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 133
Target Start/End: Original strand, 16933798 - 16933830
Alignment:
Q  101 agggttaataggtctttacccccctgtaatata 133  Q
    ||||||||||||||||||||||| |||||||||    
T  16933798 agggttaataggtctttacccccgtgtaatata 16933830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 130
Target Start/End: Original strand, 20164620 - 20164652
Alignment:
Q  98 tatagggttaataggtctttacccccctgtaat 130  Q
    ||||||||||||| |||||||||||||||||||    
T  20164620 tatagggttaatatgtctttacccccctgtaat 20164652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 28574544 - 28574588
Alignment:
Q  105 ttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||  |||||||||| ||||||||| |||||||||||||||    
T  28574544 ttaatagagctttacccccttgtaatatatgacacttttggtttt 28574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 29309564 - 29309623
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||| |||||||||||||||| || ||  ||||||  ||||||||||    
T  29309564 agggttaataggtcttta-ccccctgtaatataggtcatttccggttttcccccctgtaaa 29309623  T

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Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 34902793 - 34902737
Alignment:
Q  104 gttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||||||||  ||||| |||||||||||||||  ||||||||||||  |||||||||    
T  34902793 gttaataggcatttacacccctgtaatataggttacttttggttttcccccctgtaa 34902737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 37403517 - 37403461
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgt 158  Q
    |||||||||||  |||||| ||||| |||||||| |||||||||||||  |||||||    
T  37403517 gggttaataggcatttacctccctgcaatataggtcacttttggttttcccccctgt 37403461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 37611540 - 37611480
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||| |  |||||||||||||||||||||| || |||| |||||  ||||||||||    
T  37611540 agggttaatggtgctttacccccctgtaatataggtcattttttgttttcccccctgtaaa 37611480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 38500284 - 38500316
Alignment:
Q  103 ggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||||||||||||||||| ||||||||    
T  38500284 ggttaataggtctttacccccctgcaatatagg 38500316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 130
Target Start/End: Original strand, 38982106 - 38982138
Alignment:
Q  98 tatagggttaataggtctttacccccctgtaat 130  Q
    ||||||||||||| |||||||||||||||||||    
T  38982106 tatagggttaatatgtctttacccccctgtaat 38982138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 130
Target Start/End: Original strand, 39013203 - 39013235
Alignment:
Q  98 tatagggttaataggtctttacccccctgtaat 130  Q
    ||||||||||||| |||||||||||||||||||    
T  39013203 tatagggttaatatgtctttacccccctgtaat 39013235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 39452390 - 39452350
Alignment:
Q  121 cccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||| | ||||||||||||| |||||||||||    
T  39452390 cccctgtaatataagtcacttttggttttttcccctgtaaa 39452350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 41565569 - 41565533
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||||||||| |||||||| |||||||||||    
T  41565569 atagggttaataggtccttacccccgtgtaatatagg 41565533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 17763334 - 17763395
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  17763334 tagggttaataggtctttacccctctgtaatataggacacttttggttttgccccctgtaaa 17763395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 34158057 - 34158117
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||    
T  34158057 agggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgnaaa 34158117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 1589387 - 1589444
Alignment:
Q  104 gttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||    
T  1589387 gttaataggcctttacccccctgtaatataggtcacttttggttttgccccctgtaaa 1589444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 5219095 - 5219035
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||||    
T  5219095 agggttaataggcctttacccccctgtaatataggtcacttttgattttgccccctgtaaa 5219035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 11056728 - 11056788
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| ||| ||||||    
T  11056728 agggttaataggtctttacccccctgtaatataaggcacttttggttttgccccttgtaaa 11056788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 17764757 - 17764698
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||| || |||||||||||| |||||||||||||| ||||||||||    
T  17764757 gggttaataggtctttactccactgtaatatagggcacttttggttttgccccctgtaaa 17764698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 48168844 - 48168908
Alignment:
Q  96 tatatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||| ||||||||||||||||||||| | ||||||||||| |||||||||||||| ||||||||||    
T  48168844 tataaagggttaataggtctttaccctc-tgtaatatagggcacttttggttttgccccctgtaaa 48168908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 9553399 - 9553458
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||| | ||||||||    
T  9553399 agggttaataggtctttacccc-ctgtaatatagggcacttttggttttgcctcctgtaaa 9553458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 9554318 - 9554258
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||  ||||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  9554318 agggttaataaatctttaccctcctgtaatatagggcacttttggttttgccccctgtaaa 9554258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 23161099 - 23161158
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||||| |||||||||||    
T  23161099 agggttaataggtctttaccctcctgtaatataggttacttttggtttt-tcccctgtaaa 23161158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 24434906 - 24434966
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||||||||||||| || ||||||| |||||| || |||||||    
T  24434906 agggttaataggtctttacccccctgtaatatcgggcacttttcgttttgccctctgtaaa 24434966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 24758050 - 24757990
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||||  |||| ||||||||| ||||| ||||    
T  24758050 agggttaataggtctttacccccctgtaatatagatcactattggttttgccccctataaa 24757990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 12814593 - 12814652
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||||||||||| ||||||||||||||| || || ||||||| ||||||||||    
T  12814593 agggttaataggtctttactcccctgtaatataggtcatttgtggttttctcccctgtaa 12814652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 45865709 - 45865650
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||| || ||||||||||||||||||| |||||||||||||  ||||||||||    
T  45865709 gggttaataggcctctacccccctgtaatataggtcacttttggttttaccccctgtaaa 45865650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 141
Target Start/End: Complemental strand, 1676457 - 1676411
Alignment:
Q  95 ttatatagggttaataggtctttacccccctgtaatataggacactt 141  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  1676457 ttatatagggttaataggtttttacccccctgtaatataggtcactt 1676411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 1594182 - 1594134
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttg 150  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  1594182 agggttaataggtctttaccccc-tgtaatataggtcacttttggttttg 1594134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 13286925 - 13286864
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||||| ||||||||||| || || |||||||  ||||||||||    
T  13286925 tagggttaataggtctttacccccttgtaatataggtcatttctggttttcccccctgtaaa 13286864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 15037465 - 15037417
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttt 148  Q
    |||||||||||||||||||||||||||||||||||| || || ||||||    
T  15037465 tagggttaataggtctttacccccctgtaatataggtcatttctggttt 15037417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 16902396 - 16902337
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||  ||||||||||||||| || |||||||||| |||||||||||    
T  16902396 atagggttaataggtcttta--cccctgtaatataggtcatttttggtttt-tcccctgtaaa 16902337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 19410509 - 19410568
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||| |||||||||||  | || ||||||| |||||||||||    
T  19410509 gggttaataggtctttacccccttgtaatataggttatttctggttttttcccctgtaaa 19410568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 38193251 - 38193193
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||| ||||||||||| || || ||||||| |||||||||||    
T  38193251 gggttaataggtctttaccccc-tgtaatataggtcatttctggttttctcccctgtaaa 38193193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 135
Target Start/End: Original strand, 38192961 - 38192995
Alignment:
Q  101 agggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||||||||||||||||||||||||||||    
T  38192961 agggttaataggtctttacccccctgtaatatagg 38192995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 1492758 - 1492818
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||||  |||||||||| ||||||||||| || ||||||||||  |||||||||    
T  1492758 tagggttaatagtgctttacccccttgtaatataggtcatttttggttttcccccctgtaa 1492818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 12180895 - 12180859
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||||||||||||| ||||||||||||||||    
T  12180895 atagggttaataggtctttatccccctgtaatatagg 12180859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 13773021 - 13772973
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||  |||||||||| ||||||||||||||||||| |||||    
T  13773021 agggttaatagagctttacccccttgtaatataggacacttttagtttt 13772973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 133
Target Start/End: Original strand, 13797415 - 13797447
Alignment:
Q  101 agggttaataggtctttacccccctgtaatata 133  Q
    |||||||||||||||||||||||||||||||||    
T  13797415 agggttaataggtctttacccccctgtaatata 13797447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 19272507 - 19272460
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||||||||| ||||||||||||||| || ||||||||||    
T  19272507 agggttaataggtctttac-cccctgtaatataggtcatttttggtttt 19272460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 20041196 - 20041160
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatatagg 135  Q
    ||||||||||||||| |||||||||||||||||||||    
T  20041196 atagggttaataggtttttacccccctgtaatatagg 20041160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 45164174 - 45164118
Alignment:
Q  105 ttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||| |||||||||||| || || |||||||  ||||||||||    
T  45164174 ttaataggtctttaccccactgtaatataggtcatttctggttttcacccctgtaaa 45164118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 47160493 - 47160553
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||| |||||||| ||||||||||||||||  |||||| ||||||| |||| ||||    
T  47160493 agggttaatgggtctttagccccctgtaatataggttacttttagttttgttccctataaa 47160553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 10660006 - 10659959
Alignment:
Q  114 ctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||| || ||||||||||  ||||||||||    
T  10660006 ctttacccccctgtaatataggtcatttttggttttcccccctgtaaa 10659959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 13279474 - 13279416
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||| ||||||||||| || ||| ||||||  ||||||||||    
T  13279474 gggttaataggtctttaccccc-tgtaatataggtcattttcggtttttccccctgtaaa 13279416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 135
Target Start/End: Complemental strand, 14079056 - 14079021
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||||||||||||||||| |||||||||||    
T  14079056 tagggttaataggtctttacccccatgtaatatagg 14079021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 135
Target Start/End: Complemental strand, 14389084 - 14389049
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||||||||||||||||| |||||||||||    
T  14389084 tagggttaataggtctttacccccatgtaatatagg 14389049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 135
Target Start/End: Original strand, 44413881 - 44413916
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||||||||||||||| |||||||||||||    
T  44413881 tagggttaataggtctttaccctcctgtaatatagg 44413916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 48104510 - 48104566
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||  ||||||||||| || |||| ||||| |||||||||||    
T  48104510 ggttaataggtctttacccc--tgtaatataggtcattttttgttttctcccctgtaaa 48104566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 135
Target Start/End: Original strand, 24555703 - 24555737
Alignment:
Q  101 agggttaataggtctttacccccctgtaatatagg 135  Q
    ||||||||||||||||||||| |||||||||||||    
T  24555703 agggttaataggtctttaccctcctgtaatatagg 24555737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 24555961 - 24555901
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||| |||| |||||||||||||||| || || ||||||| |||||||||||    
T  24555961 atagggttaataggttttta-ccccctgtaatataggtcatttctggtttt-tcccctgtaaa 24555901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 46459000 - 46459042
Alignment:
Q  119 cccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||| |||||||||||||||| | ||||||||    
T  46459000 cccccctgtaatatatgacacttttggttttgcctcctgtaaa 46459042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 48896481 - 48896526
Alignment:
Q  104 gttaataggtctttacccccctgtaatataggacacttttggttttg 150  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||    
T  48896481 gttaataggtctttacctcc-tgtaatataggtcacttttggttttg 48896526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 1830810 - 1830858
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||| ||||    
T  1830810 tagggttaatagggctttacccc-ctgtaatataggatacttttgatttt 1830858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 14554507 - 14554447
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||| |||||||||| ||||||||||| || |||| |||||  ||||||||||    
T  14554507 tagggttaataggcctttaccccc-tgtaatataggtcattttttgttttcccccctgtaaa 14554447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 24204818 - 24204859
Alignment:
Q  108 ataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||||||||||||||||||| || ||| ||||||    
T  24204818 ataggtctttacccccctgtaatataggtcattttcggtttt 24204859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 42509074 - 42509037
Alignment:
Q  124 ctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  42509074 ctgtaatatagggcacttttggttttgccccctgtaaa 42509037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 48945178 - 48945242
Alignment:
Q  96 tatatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||| ||||||||||||| ||||||| | ||||||||||| || ||||||||||| ||| ||||||    
T  48945178 tataaagggttaataggtttttaccctc-tgtaatataggtcatttttggttttgccccttgtaaa 48945242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 1832037 - 1831990
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||| |||||||||| ||||||||||| |||||||| ||||    
T  1832037 agggttaatagggctttaccccc-tgtaatatagggcacttttgatttt 1831990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 4517868 - 4517924
Alignment:
Q  105 ttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||| ||||||||||| || ||  | |||| |||||||||||    
T  4517868 ttaataggtctttacccccttgtaatataggtcatttccgattttttcccctgtaaa 4517924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 4675938 - 4675983
Alignment:
Q  114 ctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||| || |||||||||  |||||||||||    
T  4675938 ctttacccccctgtaatataggtcatttttggttt--tcccctgtaaa 4675983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 5217763 - 5217823
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||| | |||||||||||| ||||||||| ||| |||  ||||| ||||||||||    
T  5217763 agggttaatatgcctttacccccctataatataggtcacatttttttttgccccctgtaaa 5217823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 8174888 - 8174931
Alignment:
Q  106 taataggtctttacccccctgtaatataggacacttttggttttg 150  Q
    ||||||||||||||||| |||||||||||| || |||||||||||    
T  8174888 taataggtctttacccc-ctgtaatatagggcatttttggttttg 8174931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 129
Target Start/End: Complemental strand, 23162236 - 23162208
Alignment:
Q  101 agggttaataggtctttacccccctgtaa 129  Q
    |||||||||||||||||||||||||||||    
T  23162236 agggttaataggtctttacccccctgtaa 23162208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 24204967 - 24205027
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||| |  |||||||||||||||||||||| ||  |||||||||  ||||||||||    
T  24204967 agggttaatggtgctttacccccctgtaatataggtcatatttggttttcccccctgtaaa 24205027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 28157022 - 28157070
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||| |  |||||||||||||||||||||| || ||||||||||    
T  28157022 agggttaatggtgctttacccccctgtaatataggtcatttttggtttt 28157070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 33757409 - 33757456
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||| |||||||||| |||||||||||| |||||||| ||||    
T  33757409 agggttaatagatctttacccc-ctgtaatataggtcacttttgatttt 33757456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 35913345 - 35913310
Alignment:
Q  98 tatagggttaataggtctttacccccctgtaatatag 134  Q
    |||||||||||||||||||||| ||||||||||||||    
T  35913345 tatagggttaataggtctttac-cccctgtaatatag 35913310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 38092035 - 38092083
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttg 150  Q
    ||||||||||| | |||| ||||||||||||||| |||||| |||||||    
T  38092035 gggttaataggccgttactcccctgtaatataggtcactttcggttttg 38092083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 130
Target Start/End: Original strand, 44377458 - 44377490
Alignment:
Q  98 tatagggttaataggtctttacccccctgtaat 130  Q
    ||||||||||||| |||||||||||||||||||    
T  44377458 tatagggttaatatgtctttacccccctgtaat 44377490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 130
Target Start/End: Original strand, 44386325 - 44386357
Alignment:
Q  98 tatagggttaataggtctttacccccctgtaat 130  Q
    ||||||||||||| |||||||||||||||||||    
T  44386325 tatagggttaatatgtctttacccccctgtaat 44386357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 9441566 - 9441626
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  9441566 agggttaataggtctttacccccctgtaatataagacacttttggttttgccccctgtaaa 9441626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 33667696 - 33667631
Alignment:
Q  96 tatatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||| |||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  33667696 tatatagggttaataggcctttacacccctgtaatataggtcacttttggttttgccccctgtaaa 33667631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 14625369 - 14625428
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  14625369 agggttaataggtctttacccc-ctgtaatataggacacttttggttttgccccctgtaaa 14625428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 23322669 - 23322609
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||    
T  23322669 tagggttaataggtctttacccccctgtaatatagagcacttttggttttgccccctgtaa 23322609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 195
Target Start/End: Original strand, 43635833 - 43635927
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaannnnnnnnnagatttcgtccttgtaaaatgaaga 195  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||| ||||         |||||||||||||||||||||||||    
T  43635833 tagggttaataggtctttacccc-ctgtaatatagggcacttttggttttgccccctttaaaaaaaaaattagatttcgtccttgtaaaatgaaga 43635927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 9443049 - 9442988
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||| ||| ||||||    
T  9443049 tagggttaataggtctttacccccctgtaatatagagcacttttggttttgccccttgtaaa 9442988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 14626837 - 14626777
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||||    
T  14626837 agggttaataggtctttactcccctgtaatatagggcacttttggttttgcctcctgtaaa 14626777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 52084884 - 52084824
Alignment:
Q  102 gggttaataggtctttacccccc-tgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||    
T  52084884 gggttaataggtctttaccccccctgtaatatagagcacttttggttttgtcccctgtaaa 52084824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 20132381 - 20132440
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||| ||| ||||||    
T  20132381 gggttaataggcctttacccccctgtaatataggtcacttttggttttggcccttgtaaa 20132440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 31648075 - 31648134
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||||||| |||||||||||    
T  31648075 gggttaataggcctttacccccatgtaatataggtcacttttggttttatcccctgtaaa 31648134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 47146425 - 47146367
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||  |||||||||    
T  47146425 ggttaataggtctttacccccttgtaatataggtcacttttggttttgctccctgtaaa 47146367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 1825296 - 1825352
Alignment:
Q  104 gttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  1825296 gttaataggtctttacccc-ctgtaatataggtcacttttggttttgccccctgtaaa 1825352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 1826494 - 1826433
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||| || ||||||||||||||||||||| |||||||| ||||| ||||||||||    
T  1826494 tagggttaatatgtttttacccccctgtaatataggtcacttttgattttgccccctgtaaa 1826433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 26095812 - 26095872
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||    
T  26095812 tagggttaataggtctttacccc-ctgtaatataggtcacttatggttttgccccctgtaaa 26095872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 25600928 - 25600988
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||||||||  |||||||||    
T  25600928 tagggttaataggtctttacccctctgcaatataggtcacttttggttttcccccctgtaa 25600988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 26097085 - 26097026
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||| | ||||||||    
T  26097085 agggttaataggtctttaccccc-tgtaatataggtcacttttggttttgcctcctgtaaa 26097026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 52083580 - 52083628
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttg 150  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||    
T  52083580 gggttaataggtctttacccccctgtaatatagggcatttttggttttg 52083628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 13916091 - 13916150
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||||||||||| |||||||||| ||||||||| ||||||||||||||| ||| ||||||    
T  13916091 agggttaatagggctttacccccttgtaatatatgacacttttggttttctcctctgtaa 13916150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 23321260 - 23321322
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||| |||||| || ||||||||||||| |||||||||||||| ||| ||||||    
T  23321260 atagggttaatagatctttatcctcctgtaatatagggcacttttggttttgccccatgtaaa 23321322  T

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Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 159
Target Start/End: Complemental strand, 40247435 - 40247381
Alignment:
Q  105 ttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgta 159  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||  ||||||||    
T  40247435 ttaataggtctttacccccatgtaatatagggcacttttggttttcccccctgta 40247381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 32131963 - 32131903
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||| |||||    
T  32131963 atagggttaataggtctttaccccc-tgtaatataggtcactttcggttttgccccttgtaa 32131903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 36343152 - 36343213
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||| ||||||||||||| || |||| |||||  ||||||||||    
T  36343152 tagggttaataggtctttaccctcctgtaatataggtcattttttgttttcccccctgtaaa 36343213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 158
Target Start/End: Complemental strand, 44754661 - 44754604
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgt 158  Q
    |||||||||||| ||||||||||||| |||||||| |||||||||||||  |||||||    
T  44754661 agggttaataggcctttacccccctgcaatataggtcacttttggttttcccccctgt 44754604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 5560876 - 5560920
Alignment:
Q  105 ttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||||||||||||||||||||  |||||||||||||    
T  5560876 ttaataggtctttacccccctgtaatatagagcacttttggtttt 5560920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 8928813 - 8928872
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||||||||||||||| |||||||||| | |||||||| ||||| |||||||||    
T  8928813 tagggttaataggtctttacccc-ctgtaatataaggcacttttgattttgccccctgtaa 8928872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 12277512 - 12277452
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||| |  |||||||||||||||||||||| || |||||||||| |||||||||||    
T  12277512 agggttaatggtgctttacccccctgtaatataggtcatttttggttttctcccctgtaaa 12277452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 16785720 - 16785779
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||||| ||||||||| ||||||| |||| |||||||||||||| |||||||||    
T  16785720 tagggttaataggcctttacccc-ctgtaatgtaggtcacttttggttttgccccctgtaa 16785779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 24730262 - 24730202
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||| |  |||||||||||||||||||||| |||||||||||||  ||||||||||    
T  24730262 agggttaatggtgctttacccccctgtaatataggtcacttttggttttcccccctgtaaa 24730202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 33934636 - 33934696
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||  ||||| ||||||||||||||  |||||||||||||| ||||||||||    
T  33934636 agggttaatagggttttacgcccctgtaatatagatcacttttggttttgccccctgtaaa 33934696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 50105455 - 50105407
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  50105455 agggttaataggtctttaccctcctgtaatataggtcacttttgatttt 50105407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 160
Target Start/End: Complemental strand, 13917309 - 13917270
Alignment:
Q  121 cccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  13917309 cccctgtaatataggacacttttggttttctcccctgtaa 13917270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 14978767 - 14978709
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||||||||||| |||||||||| ||| |||||||||||||||||||||| ||| |||||    
T  14978767 agggttaataggcctttaccccc-tgttatataggacacttttggttttgccccttgtaa 14978709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 51470129 - 51470187
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||| |||||||||| | |||||||||||||| || |||||||    
T  51470129 gggttaataggtctttacccc-ctgtaatataagtcacttttggttttgccctctgtaaa 51470187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 34360307 - 34360269
Alignment:
Q  97 atatagggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  34360307 atatagggttaataggtctttacctccctgtaatatagg 34360269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 13902066 - 13902122
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||||||||||||||||| || ||||||||||| || ||||||||||| |||||||||    
T  13902066 ggttaataggtctttaccacc-tgtaatatagggcagttttggttttgccccctgtaa 13902122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 13903429 - 13903381
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttg 150  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||||||    
T  13903429 agggttaatagatctttaccccc-tgtaatataggtcacttttggttttg 13903381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 15961582 - 15961643
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||| |  |||||||||||||||||||||| ||  ||||||||| |||||||||||    
T  15961582 tagggttaatggtgctttacccccctgtaatataggtcatatttggttttctcccctgtaaa 15961643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 28411207 - 28411147
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||| |||||||||||||||| ||||||||| || || ||||||| |||||||||||    
T  28411207 tagggttaagaggtctttacccccctttaatataggtcatttctggtttt-tcccctgtaaa 28411147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 32130642 - 32130691
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||| ||||||||||  |||||||||| |||||||||||||    
T  32130642 tagggttaataggcctttaccccctagtaatataggtcacttttggtttt 32130691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 44311206 - 44311254
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||| ||||    
T  44311206 tagggttaataggcctttacccc-ctgtaatataggacacttttgctttt 44311254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 47145145 - 47145194
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttg 150  Q
    |||||||||||  |||||||||||||||||||||| |||||||| |||||    
T  47145145 agggttaatagacctttacccccctgtaatataggtcacttttgattttg 47145194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 15336378 - 15336432
Alignment:
Q  105 ttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||| |||||||||||| || |||||||||| |||||||||||    
T  15336378 ttaataggtctttacccc-ctgtaatataggtcatttttggtttt-tcccctgtaaa 15336432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 15790531 - 15790483
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||||||| |||||||||||||||||| || || |||||||    
T  15790531 agggttaataggtcttgacccccctgtaatataggtcatttctggtttt 15790483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 15961800 - 15961740
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||| |  |||||||||||||||||||||| || ||||||||||  ||||||||||    
T  15961800 agggttaatggtgctttacccccctgtaatataggtcatttttggttttcccccctgtaaa 15961740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 38741493 - 38741533
Alignment:
Q  121 cccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  38741493 cccctgtaatataagacacttttggttttgccccctgtaaa 38741533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 50721985 - 50721925
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||| |  |||||||||||||||||||||| || ||||||||||  ||||||||||    
T  50721985 agggttaatggtgctttacccccctgtaatataggtcatttttggttttcccccctgtaaa 50721925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 8984849 - 8984912
Alignment:
Q  98 tatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||   |||| |||| ||||||||||| |||||||| ||||| ||||||||||    
T  8984849 tatagggttaatagagttttagccccatgtaatataggccacttttgattttgccccctgtaaa 8984912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 135
Target Start/End: Original strand, 42736612 - 42736647
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatatagg 135  Q
    ||||||||||| ||||||||||||||||||||||||    
T  42736612 tagggttaataagtctttacccccctgtaatatagg 42736647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 135
Target Start/End: Complemental strand, 8620251 - 8620217
Alignment:
Q  101 agggttaataggtctttacccccctgtaatatagg 135  Q
    ||||||||||| |||||||||||||||||||||||    
T  8620251 agggttaatagatctttacccccctgtaatatagg 8620217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 10490294 - 10490236
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||  |||||| ||||||||||||||| || |||||||||| ||| |||||||    
T  10490294 ggttaatagtgctttactcccctgtaatataggtcatttttggttttatcctctgtaaa 10490236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 16786205 - 16786147
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||  |||||||||| ||||||||||| |||||||| ||||  ||||||||||    
T  16786205 ggttaatagagctttacccccatgtaatataggtcacttttgattttaccccctgtaaa 16786147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 24987605 - 24987665
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||| |||||||||||||||| || ||  |||||| |||||||||||    
T  24987605 atagggttaataggtcttta-ccccctgtaatataggtcatttccggtttt-tcccctgtaaa 24987665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 135
Target Start/End: Original strand, 27794357 - 27794391
Alignment:
Q  101 agggttaataggtctttacccccctgtaatatagg 135  Q
    ||||||||||||||||||||||||| |||||||||    
T  27794357 agggttaataggtctttacccccctataatatagg 27794391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 31648642 - 31648585
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||  |||||||||| |||||||||||  | ||||||||||||||||||||||    
T  31648642 ggttaatagacctttaccccc-tgtaatataggttatttttggttttgtcccctgtaaa 31648585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 44200324 - 44200373
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||||||||||| |||| ||||||||||| || ||||||||||    
T  44200324 atagggttaataggtcttta-ccccttgtaatataggccatttttggtttt 44200373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 7780278 - 7780220
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||| | |||||||||  ||||||||||  |||||||||||||| ||||||||||    
T  7780278 agggttaatatgcctttacccc--tgtaatatagatcacttttggttttgccccctgtaaa 7780220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 8930386 - 8930345
Alignment:
Q  120 ccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||| |  ||||||||||||||||||||||||    
T  8930386 ccccctgtaatataaggtacttttggttttgtcccctgtaaa 8930345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 9439463 - 9439427
Alignment:
Q  98 tatagggttaataggtctttacccccctgtaatatagg 135  Q
    |||||||||||||||||||||| |||||||||||||||    
T  9439463 tatagggttaataggtctttac-cccctgtaatatagg 9439427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 22591278 - 22591326
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||| |||||||||  ||||||||||| |||||||||||||    
T  22591278 tagggttaataggcctttacccct-tgtaatataggtcacttttggtttt 22591326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 22604721 - 22604661
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||| |||| ||||||||||| || ||  |||||| |||||||||||    
T  22604721 tagggttaataggtctttaacccc-tgtaatataggtcatttccggttttttcccctgtaaa 22604661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 24730054 - 24730103
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||| |  |||||||||||||||||||||| || ||||||||||    
T  24730054 tagggttaatggtgctttacccccctgtaatataggtcatttttggtttt 24730103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 133
Target Start/End: Complemental strand, 27794653 - 27794620
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatata 133  Q
    ||||||||||||||||||||| ||||||||||||    
T  27794653 tagggttaataggtctttacctccctgtaatata 27794620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 2273503 - 2273546
Alignment:
Q  104 gttaataggtctttacccccctgtaatataggacacttttggttt 148  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||    
T  2273503 gttaataggtctttacccc-ctgtaatatagggcactttttgttt 2273546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 7112489 - 7112552
Alignment:
Q  97 atatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||| ||||||||||||||||| |||||||||||||| | || ||| ||||||  ||||||||||    
T  7112489 atattgggttaataggtcttta-ccccctgtaatatatgtcattttcggtttttccccctgtaaa 7112552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 152
Target Start/End: Complemental strand, 8985847 - 8985815
Alignment:
Q  120 ccccctgtaatataggacacttttggttttgtc 152  Q
    |||||||||||||||||||||||| ||||||||    
T  8985847 ccccctgtaatataggacacttttagttttgtc 8985815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 16698860 - 16698927
Alignment:
Q  93 ttttatatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||| |||||||||||||||||| ||| |||||||||||  || ||  |||||| |||||||||||    
T  16698860 ttttataaagggttaataggtcttta-ccctctgtaatatagatcatttccggttttttcccctgtaaa 16698927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 16699163 - 16699115
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||||||||||||||  |||||||||| || || |||||||    
T  16699163 agggttaataggtctttaccccctggtaatataggtcatttctggtttt 16699115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 21853411 - 21853462
Alignment:
Q  97 atatagggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||| ||||||||||||||| |||||||||||||||| || || |||||||    
T  21853411 atatagcgttaataggtcttta-ccccctgtaatataggtcatttctggtttt 21853462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 27547323 - 27547383
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||| | ||||||  || ||||||||||| || |||||||||||||| ||||||    
T  27547323 tagggttaatatgcctttacatccttgtaatatagggcatttttggttttgtcctctgtaa 27547383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 35979642 - 35979584
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||| ||||| ||||||||| | |||||||| ||||| ||||||||||    
T  35979642 agggttaataggtcttttccccc-tgtaatataagtcacttttgattttg-cccctgtaaa 35979584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 47221996 - 47221949
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||||||||| || |||| |||||||| |||||||||||||    
T  47221996 agggttaataggtcttta-cctcctgcaatataggtcacttttggtttt 47221949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 4705 - 4766
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||    
T  4705 tagggttaataggtctttacccccctgtaatatagggcacttttggttttgcctcctgtaaa 4766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 5953 - 5895
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    |||||||||||||||||| | ||||||||||||| |||||||||||||| ||| |||||    
T  5953 gggttaataggtctttacactcctgtaatatagggcacttttggttttgccccttgtaa 5895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 347 - 286
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  347 tagggttaataggtctttacccccatgtaatatagggcacttttggttttgccccctgtaaa 286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0804 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0804
Description:

Target: scaffold0804; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 2732 - 2792
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||||    
T  2732 agggttaataggtctttactcccctgtaatatagggcacttttggttttgcctcctgtaaa 2792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 3913 - 3972
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  3913 agggttaataggtctttacccc-ctgtaatgtaggacacttttggttttgccccctgtaaa 3972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 5016 - 4955
Alignment:
Q  101 agggttaataggtctttacccccc-tgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||| ||||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  5016 agggttaataagtctttaccccccctgtaatataggtcacttttggttttgccccctgtaaa 4955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 227367 - 227423
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccct 156  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||    
T  227367 tagggttaataggtctttacctccctgtaatataggtcacttttggttttgccccct 227423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 228645 - 228585
Alignment:
Q  102 gggttaataggtctttacccccc-tgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||    
T  228645 gggttaataggtctttaccccccgtgtaatataggtcacttttagttttgccccctgtaaa 228585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 23685 - 23743
Alignment:
Q  103 ggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||    
T  23685 ggttaataggtctttacccccatgtaatataagacacttttgattttgccccctgtaaa 23743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 15870 - 15930
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||| |||||||||||||||||    
T  15870 tagggttaataggtctttatcccc-tgtaatatatgacactttttgttttgtcccctgtaaa 15930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 17514 - 17455
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||||||| ||| || | |||||||||||  |||||||||||||||| ||||||    
T  17514 tagggttaataggtcattatcctc-tgtaatatagggtacttttggttttgtcctctgtaa 17455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 10079 - 10138
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||| |||||||||||| ||||||| |||||| ||||||||||    
T  10079 agggttaataggtctttacccc-ctgtaatatagggcacttttagttttgccccctgtaaa 10138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 11643 - 11567
Alignment:
Q  84 tgacatcatttttatatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||| ||||||| |||||||||||||  ||||||||||||||||||||    ||||||||||||| ||||||||||    
T  11643 tgacataattttta-atagggttaatagagctttacccccctgtaatatatagtacttttggttttgccccctgtaaa 11567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 2118 - 2058
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||||||||||||||||| || || |||||||  ||||||||||    
T  2118 agggttaataggtctttacccccctgtaatataggtcatttctggttttcacccctgtaaa 2058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 35597 - 35657
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||||||| |  |||||||| |||||||||||||| ||||||||||    
T  35597 tagggttaataggtctttaccccc-taaaatataggtcacttttggttttgccccctgtaaa 35657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 695 - 636
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||||||||||| ||| |||||||||||| || || |||||||  |||||||||    
T  695 tagggttaataggtcttta-ccctctgtaatataggtcatttatggttttcccccctgtaa 636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 135
Target Start/End: Original strand, 3912 - 3947
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatatagg 135  Q
    ||||||||||||||||||||||||||||||||||||    
T  3912 tagggttaataggtctttacccccctgtaatatagg 3947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 4210 - 4150
Alignment:
Q  100 tagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||||||||| ||||||||||||||| || ||  ||||||  ||||||||||    
T  4210 tagggttaataggtctttac-cccctgtaatataggtcatttccggttttcccccctgtaaa 4150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1797 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1797
Description:

Target: scaffold1797; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 161
Target Start/End: Complemental strand, 723 - 677
Alignment:
Q  115 tttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||||||||||| || |||||||||| |||||||||||    
T  723 tttacccccctgtaatataggtcatttttggttttctcccctgtaaa 677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 6809 - 6857
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    |||||||||||||||||| |||||||||||||||| || || |||||||    
T  6809 agggttaataggtctttatccccctgtaatataggtcatttatggtttt 6857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 110408 - 110468
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    ||||||||||||  |||| |||||||||||||| | ||||||||||||||  |||||||||    
T  110408 agggttaataggcatttatccccctgtaatatatgtcacttttggttttgctccctgtaaa 110468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 150287 - 150224
Alignment:
Q  98 tatagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||| |  |||||| ||||||||||||||| || ||||||||||  ||||||||||    
T  150287 tatagggttaatggtgctttacacccctgtaatataggtcatttttggttttcccccctgtaaa 150224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 149985 - 150033
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||| |  |||||||||||||||||||||| || ||||||||||    
T  149985 agggttaatggtgctttacccccctgtaatataggtcatttttggtttt 150033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 37447 - 37389
Alignment:
Q  102 gggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaa 160  Q
    ||||||||||   ||||| ||||||| |||||||| ||||||||||||| |||||||||    
T  37447 gggttaatagagttttacacccctgtcatataggatacttttggttttgccccctgtaa 37389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 63028 - 63090
Alignment:
Q  99 atagggttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||||||||  |||||||||||||||||||||| || ||  ||||||  ||||||||||    
T  63028 atagggttaatagtgctttacccccctgtaatataggtcatttccggttttcccccctgtaaa 63090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 16129 - 16084
Alignment:
Q  101 agggttaataggtctttacccccctgtaatataggacacttttggt 146  Q
    ||||||| |||| ||||||||||||| |||||||| ||||||||||    
T  16129 agggttagtaggcctttacccccctgcaatataggtcacttttggt 16084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 2771 - 2815
Alignment:
Q  105 ttaataggtctttacccccctgtaatataggacacttttggtttt 149  Q
    ||||||||||||||| | ||||||||||||| || ||||||||||    
T  2771 ttaataggtctttacactcctgtaatataggtcatttttggtttt 2815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0430 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 12487 - 12543
Alignment:
Q  105 ttaataggtctttacccccctgtaatataggacacttttggttttgtcccctgtaaa 161  Q
    |||||||  |||||||||||||||||||||| || |||| |||||  ||||||||||    
T  12487 ttaatagtgctttacccccctgtaatataggtcattttttgtttttccccctgtaaa 12543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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