View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6331_low_30 (Length: 237)

Name: NF6331_low_30
Description: NF6331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6331_low_30
NF6331_low_30
[»] chr4 (76 HSPs)
chr4 (23-235)||(2470074-2470287)
chr4 (42-211)||(45038361-45038531)
chr4 (37-211)||(41083234-41083409)
chr4 (60-209)||(41083038-41083188)
chr4 (69-209)||(7245976-7246117)
chr4 (39-211)||(12498802-12498975)
chr4 (26-186)||(25055888-25056051)
chr4 (39-193)||(53863500-53863656)
chr4 (32-219)||(55617527-55617713)
chr4 (32-219)||(55624831-55625017)
chr4 (76-198)||(40395094-40395217)
chr4 (27-164)||(53863346-53863484)
chr4 (26-210)||(40146935-40147119)
chr4 (42-193)||(2469899-2470049)
chr4 (39-201)||(12498611-12498775)
chr4 (80-211)||(21321993-21322125)
chr4 (37-195)||(7246204-7246363)
chr4 (25-210)||(11884598-11884785)
chr4 (26-132)||(17231990-17232096)
chr4 (43-178)||(9999476-9999610)
chr4 (39-186)||(12592372-12592520)
chr4 (39-135)||(40395281-40395377)
chr4 (27-134)||(26782353-26782459)
chr4 (42-193)||(24684233-24684382)
chr4 (39-193)||(40147144-40147299)
chr4 (69-211)||(46196092-46196235)
chr4 (42-159)||(24369249-24369367)
chr4 (69-136)||(21322042-21322109)
chr4 (69-211)||(45038171-45038311)
chr4 (70-209)||(2788107-2788247)
chr4 (35-135)||(26782471-26782571)
chr4 (95-186)||(45038253-45038345)
chr4 (39-119)||(51950545-51950625)
chr4 (26-178)||(2787901-2788052)
chr4 (112-216)||(25056151-25056256)
chr4 (26-131)||(41519204-41519309)
chr4 (67-136)||(53863589-53863658)
chr4 (39-139)||(11884798-11884897)
chr4 (69-132)||(2788166-2788229)
chr4 (69-131)||(25055884-25055946)
chr4 (74-186)||(45787251-45787361)
chr4 (26-186)||(12592187-12592347)
chr4 (39-124)||(41519334-41519419)
chr4 (75-215)||(45787001-45787142)
chr4 (122-193)||(24369269-24369341)
chr4 (83-135)||(41519439-41519491)
chr4 (76-209)||(9999273-9999407)
chr4 (85-136)||(25056184-25056235)
chr4 (73-159)||(44057279-44057366)
chr4 (72-135)||(45787022-45787085)
chr4 (31-157)||(46196292-46196419)
chr4 (69-135)||(17236773-17236839)
chr4 (69-135)||(40395098-40395164)
chr4 (69-135)||(46196390-46196456)
chr4 (67-136)||(50290181-50290248)
chr4 (85-177)||(7246068-7246161)
chr4 (122-186)||(9999495-9999560)
chr4 (114-186)||(50290395-50290468)
chr4 (74-131)||(50290415-50290472)
chr4 (42-193)||(51950666-51950816)
chr4 (128-215)||(17236752-17236840)
chr4 (122-177)||(53863393-53863449)
chr4 (142-177)||(26782369-26782404)
chr4 (69-136)||(40147234-40147301)
chr4 (122-180)||(40395304-40395363)
chr4 (69-135)||(9999288-9999354)
chr4 (78-132)||(9999569-9999623)
chr4 (89-135)||(24684337-24684383)
chr4 (122-211)||(26782498-26782588)
chr4 (77-131)||(45787311-45787365)
chr4 (74-118)||(12698010-12698052)
chr4 (122-193)||(11884820-11884892)
chr4 (122-193)||(12592395-12592467)
chr4 (148-208)||(14984063-14984123)
chr4 (155-211)||(17389054-17389110)
chr4 (99-135)||(51950468-51950504)
[»] chr5 (77 HSPs)
chr5 (26-211)||(35461418-35461604)
chr5 (27-210)||(16327081-16327265)
chr5 (26-193)||(1996142-1996310)
chr5 (26-193)||(25456276-25456443)
chr5 (39-209)||(10827287-10827459)
chr5 (27-209)||(23662048-23662232)
chr5 (39-209)||(20927829-20928000)
chr5 (76-218)||(35461655-35461798)
chr5 (39-193)||(16327281-16327434)
chr5 (36-193)||(28559235-28559393)
chr5 (60-167)||(5746121-5746229)
chr5 (25-180)||(14604082-14604235)
chr5 (73-204)||(35813515-35813646)
chr5 (74-211)||(32361150-32361288)
chr5 (81-221)||(25456499-25456639)
chr5 (69-203)||(4943173-4943309)
chr5 (39-193)||(17400727-17400884)
chr5 (26-211)||(19550248-19550422)
chr5 (42-186)||(1996338-1996483)
chr5 (26-134)||(7209848-7209956)
chr5 (69-216)||(17400522-17400669)
chr5 (27-231)||(12774319-12774526)
chr5 (76-193)||(35812135-35812253)
chr5 (69-193)||(28559448-28559573)
chr5 (73-220)||(19550073-19550220)
chr5 (26-134)||(36760767-36760875)
chr5 (67-134)||(4943232-4943299)
chr5 (27-231)||(12713055-12713262)
chr5 (69-132)||(23661881-23661944)
chr5 (41-178)||(23661894-23662030)
chr5 (41-178)||(23796540-23796676)
chr5 (69-132)||(23796626-23796689)
chr5 (27-186)||(4943069-4943231)
chr5 (69-139)||(17400819-17400889)
chr5 (93-210)||(20928052-20928170)
chr5 (69-131)||(20928088-20928150)
chr5 (73-135)||(35461712-35461774)
chr5 (26-132)||(36759665-36759771)
chr5 (23-124)||(5746273-5746374)
chr5 (39-179)||(37642976-37643117)
chr5 (39-139)||(33491567-33491667)
chr5 (88-186)||(10074156-10074255)
chr5 (74-159)||(14604283-14604369)
chr5 (69-131)||(35813570-35813632)
chr5 (81-157)||(10827143-10827219)
chr5 (69-159)||(1649343-1649433)
chr5 (69-135)||(1996141-1996207)
chr5 (122-211)||(7209830-7209920)
chr5 (142-184)||(14604292-14604334)
chr5 (69-135)||(40980710-40980776)
chr5 (122-194)||(1996201-1996274)
chr5 (144-209)||(23796356-23796421)
chr5 (27-191)||(37642796-37642961)
chr5 (85-193)||(38680630-38680734)
chr5 (97-193)||(40980711-40980808)
chr5 (76-132)||(25456554-25456609)
chr5 (122-193)||(33491572-33491644)
chr5 (42-130)||(38682790-38682878)
chr5 (74-133)||(23796373-23796432)
chr5 (73-136)||(35812192-35812255)
chr5 (69-135)||(25456275-25456340)
chr5 (73-135)||(28559234-28559296)
chr5 (69-135)||(28559508-28559574)
chr5 (70-131)||(37032971-37033030)
chr5 (80-125)||(14604349-14604394)
chr5 (71-159)||(37032913-37033001)
chr5 (73-195)||(1649406-1649526)
chr5 (76-135)||(6588091-6588148)
chr5 (45-156)||(28022136-28022248)
chr5 (142-193)||(1996379-1996430)
chr5 (76-135)||(38680629-38680688)
chr5 (69-131)||(1996425-1996487)
chr5 (83-125)||(10074211-10074253)
chr5 (122-186)||(13170005-13170065)
chr5 (144-186)||(38682833-38682875)
chr5 (127-191)||(1649341-1649406)
chr5 (39-131)||(20181404-20181496)
[»] chr6 (33 HSPs)
chr6 (26-218)||(21598615-21598808)
chr6 (27-221)||(17136816-17137011)
chr6 (27-211)||(10356432-10356617)
chr6 (39-211)||(21598427-21598600)
chr6 (39-207)||(35225384-35225553)
chr6 (27-211)||(9982841-9983025)
chr6 (69-209)||(10356245-10356386)
chr6 (42-191)||(17342626-17342776)
chr6 (80-213)||(35050804-35050938)
chr6 (23-209)||(363971-364156)
chr6 (27-208)||(24059653-24059832)
chr6 (39-186)||(9982677-9982825)
chr6 (74-209)||(13273052-13273185)
chr6 (95-192)||(35050704-35050802)
chr6 (69-193)||(35050738-35050858)
chr6 (73-185)||(17137030-17137143)
chr6 (29-135)||(2761574-2761680)
chr6 (36-134)||(364175-364274)
chr6 (27-211)||(13273236-13273420)
chr6 (90-178)||(19557872-19557961)
chr6 (39-134)||(35050596-35050691)
chr6 (76-193)||(3895705-3895821)
chr6 (73-135)||(3895762-3895822)
chr6 (39-101)||(2761494-2761556)
chr6 (69-131)||(9982673-9982735)
chr6 (69-135)||(13273067-13273133)
chr6 (27-100)||(17342534-17342607)
chr6 (106-177)||(10356337-10356409)
chr6 (78-126)||(24059884-24059932)
chr6 (69-133)||(35050853-35050917)
chr6 (73-119)||(19557915-19557961)
chr6 (27-135)||(3848547-3848655)
chr6 (142-178)||(24059889-24059925)
[»] chr2 (36 HSPs)
chr2 (26-211)||(25895085-25895271)
chr2 (39-209)||(9500889-9501060)
chr2 (27-193)||(44556525-44556692)
chr2 (26-179)||(3876907-3877061)
chr2 (39-211)||(31630049-31630220)
chr2 (60-211)||(1316018-1316169)
chr2 (26-191)||(5009160-5009331)
chr2 (27-191)||(31630246-31630409)
chr2 (39-186)||(4511396-4511543)
chr2 (69-191)||(29379905-29380028)
chr2 (36-209)||(33847613-33847786)
chr2 (27-132)||(36694484-36694589)
chr2 (27-193)||(30265380-30265546)
chr2 (73-193)||(36217160-36217278)
chr2 (43-207)||(5009360-5009523)
chr2 (23-131)||(11791765-11791873)
chr2 (39-211)||(14166371-14166542)
chr2 (73-208)||(36217219-36217347)
chr2 (39-135)||(25894964-25895060)
chr2 (122-210)||(25894948-25895037)
chr2 (60-135)||(43699442-43699517)
chr2 (26-132)||(12612448-12612553)
chr2 (69-135)||(44556524-44556590)
chr2 (73-177)||(12612619-12612724)
chr2 (39-118)||(36694390-36694468)
chr2 (23-131)||(4188979-4189087)
chr2 (122-205)||(36694519-36694602)
chr2 (69-140)||(31630346-31630417)
chr2 (122-191)||(12612448-12612518)
chr2 (69-134)||(4188622-4188687)
chr2 (127-186)||(4189023-4189083)
chr2 (68-139)||(20245586-20245657)
chr2 (79-121)||(39442453-39442496)
chr2 (128-180)||(3876949-3877002)
chr2 (73-125)||(39442243-39442295)
chr2 (122-193)||(43699444-43699516)
[»] scaffold0018 (3 HSPs)
scaffold0018 (27-193)||(161575-161742)
scaffold0018 (39-211)||(161386-161559)
scaffold0018 (69-136)||(161677-161744)
[»] chr3 (77 HSPs)
chr3 (27-205)||(18019992-18020171)
chr3 (39-191)||(252048-252201)
chr3 (39-209)||(25848271-25848442)
chr3 (23-209)||(47891286-47891473)
chr3 (26-186)||(25848467-25848628)
chr3 (27-212)||(26724181-26724366)
chr3 (23-186)||(28813845-28814008)
chr3 (26-209)||(36900043-36900227)
chr3 (45-211)||(46337484-46337651)
chr3 (69-209)||(25848570-25848712)
chr3 (39-211)||(32186445-32186617)
chr3 (80-207)||(28814021-28814149)
chr3 (68-186)||(30954956-30955075)
chr3 (68-186)||(30970768-30970887)
chr3 (25-211)||(36374785-36374972)
chr3 (26-211)||(40286418-40286602)
chr3 (69-209)||(47069511-47069653)
chr3 (42-186)||(43649991-43650136)
chr3 (43-178)||(40286253-40286389)
chr3 (26-195)||(43650164-43650335)
chr3 (27-221)||(47573667-47573862)
chr3 (39-137)||(14964887-14964984)
chr3 (24-152)||(32186640-32186769)
chr3 (69-180)||(13903016-13903128)
chr3 (27-135)||(47069699-47069807)
chr3 (110-191)||(3169715-3169797)
chr3 (69-135)||(28814070-28814136)
chr3 (60-138)||(36667283-36667361)
chr3 (73-157)||(5442491-5442576)
chr3 (27-138)||(14624103-14624213)
chr3 (42-180)||(47891122-47891261)
chr3 (76-193)||(50332652-50332770)
chr3 (73-209)||(7607702-7607837)
chr3 (42-135)||(26724069-26724162)
chr3 (129-209)||(39541441-39541522)
chr3 (93-177)||(45131641-45131726)
chr3 (23-218)||(27768283-27768477)
chr3 (67-135)||(39541439-39541507)
chr3 (60-135)||(26976499-26976574)
chr3 (76-131)||(36667141-36667196)
chr3 (78-178)||(42865922-42866021)
chr3 (69-130)||(30955018-30955078)
chr3 (69-130)||(30970830-30970890)
chr3 (127-198)||(26724065-26724137)
chr3 (122-193)||(36667285-36667357)
chr3 (69-132)||(13903076-13903139)
chr3 (73-139)||(47573911-47573977)
chr3 (133-186)||(47573911-47573965)
chr3 (73-127)||(47891116-47891170)
chr3 (69-135)||(50332705-50332771)
chr3 (106-186)||(36667369-36667450)
chr3 (27-159)||(40209710-40209841)
chr3 (122-193)||(252106-252178)
chr3 (69-125)||(40286247-40286303)
chr3 (60-209)||(14624250-14624399)
chr3 (144-227)||(26976342-26976425)
chr3 (60-135)||(45131438-45131513)
chr3 (27-193)||(45131439-45131600)
chr3 (73-135)||(53763568-53763630)
chr3 (122-194)||(13903009-13903082)
chr3 (122-178)||(14964904-14964961)
chr3 (26-135)||(26976375-26976484)
chr3 (67-132)||(39714630-39714694)
chr3 (42-209)||(40209860-40210024)
chr3 (126-193)||(5442515-5442583)
chr3 (122-193)||(25848503-25848575)
chr3 (122-193)||(47069734-47069806)
chr3 (27-111)||(50332516-50332600)
chr3 (26-101)||(54343349-54343423)
chr3 (122-207)||(26976501-26976587)
chr3 (69-131)||(36667392-36667454)
chr3 (43-159)||(39714545-39714663)
chr3 (27-125)||(42866061-42866159)
chr3 (122-193)||(40286298-40286370)
chr3 (146-194)||(43650043-43650091)
chr3 (122-169)||(50332517-50332565)
chr3 (23-131)||(51833373-51833481)
[»] chr8 (44 HSPs)
chr8 (27-209)||(41151389-41151572)
chr8 (27-211)||(24909574-24909759)
chr8 (69-193)||(27052408-27052533)
chr8 (60-186)||(41151609-41151737)
chr8 (39-193)||(24827357-24827512)
chr8 (69-193)||(6220395-6220520)
chr8 (42-209)||(20209445-20209613)
chr8 (42-209)||(20229153-20229321)
chr8 (76-191)||(27052613-27052729)
chr8 (26-221)||(36053016-36053211)
chr8 (67-193)||(6220183-6220310)
chr8 (26-195)||(9399995-9400166)
chr8 (67-131)||(41151677-41151741)
chr8 (75-219)||(9399790-9399935)
chr8 (39-191)||(27855559-27855712)
chr8 (39-178)||(27127892-27128029)
chr8 (30-193)||(27128048-27128212)
chr8 (78-221)||(16912973-16913117)
chr8 (106-186)||(27052475-27052556)
chr8 (26-159)||(14550035-14550166)
chr8 (60-163)||(14550212-14550318)
chr8 (60-123)||(29427958-29428021)
chr8 (27-176)||(24083206-24083351)
chr8 (69-184)||(15563854-15563969)
chr8 (69-140)||(6220455-6220526)
chr8 (69-135)||(9399815-9399881)
chr8 (73-131)||(15563848-15563905)
chr8 (69-135)||(24827356-24827422)
chr8 (69-132)||(15564053-15564116)
chr8 (69-135)||(6220182-6220248)
chr8 (69-135)||(27128148-27128213)
chr8 (64-134)||(20209268-20209334)
chr8 (64-134)||(20228976-20229042)
chr8 (146-193)||(27052624-27052671)
chr8 (69-132)||(27052666-27052729)
chr8 (122-180)||(29427960-29428019)
chr8 (76-131)||(38414597-38414652)
chr8 (69-135)||(14549957-14550023)
chr8 (26-116)||(20209338-20209428)
chr8 (26-116)||(20229046-20229136)
chr8 (26-100)||(24793055-24793129)
chr8 (73-135)||(27052407-27052469)
chr8 (142-186)||(14549965-14550009)
chr8 (142-186)||(28618863-28618907)
[»] chr7 (55 HSPs)
chr7 (27-211)||(29710490-29710675)
chr7 (37-217)||(42312735-42312916)
chr7 (26-193)||(30869569-30869737)
chr7 (39-193)||(27576513-27576668)
chr7 (26-211)||(27280596-27280782)
chr7 (39-193)||(11975622-11975778)
chr7 (73-219)||(29710294-29710441)
chr7 (26-209)||(6694515-6694698)
chr7 (65-209)||(42312999-42313145)
chr7 (42-209)||(44293957-44294125)
chr7 (75-193)||(6222080-6222198)
chr7 (70-209)||(27280822-27280962)
chr7 (26-186)||(4048209-4048370)
chr7 (39-186)||(11975455-11975602)
chr7 (74-178)||(3198228-3198331)
chr7 (45-135)||(6694718-6694808)
chr7 (69-135)||(31453054-31453120)
chr7 (39-211)||(40951614-40951785)
chr7 (73-136)||(27576607-27576670)
chr7 (69-135)||(29710319-29710385)
chr7 (69-134)||(30662155-30662220)
chr7 (74-193)||(30869409-30869529)
chr7 (74-209)||(41666128-41666264)
chr7 (39-135)||(41666326-41666422)
chr7 (42-142)||(43258296-43258396)
chr7 (69-180)||(46713224-46713335)
chr7 (127-209)||(6694740-6694822)
chr7 (73-132)||(46713213-46713272)
chr7 (42-159)||(4048398-4048516)
chr7 (35-131)||(40951822-40951918)
chr7 (73-136)||(6222078-6222141)
chr7 (27-110)||(29019332-29019415)
chr7 (73-131)||(22750319-22750377)
chr7 (69-135)||(27280881-27280947)
chr7 (73-195)||(30662153-30662276)
chr7 (69-131)||(4048205-4048267)
chr7 (60-134)||(6069264-6069338)
chr7 (69-131)||(11975451-11975512)
chr7 (69-135)||(11975713-11975779)
chr7 (144-193)||(40081191-40081240)
chr7 (142-211)||(40951870-40951939)
chr7 (64-134)||(44293780-44293846)
chr7 (142-218)||(3198461-3198537)
chr7 (76-159)||(22750350-22750434)
chr7 (127-193)||(11975507-11975574)
chr7 (69-139)||(26185972-26186041)
chr7 (120-193)||(31453045-31453119)
chr7 (26-116)||(44293850-44293940)
chr7 (23-136)||(26978282-26978395)
chr7 (69-134)||(30869409-30869474)
chr7 (143-191)||(3198273-3198321)
chr7 (71-135)||(3198449-3198513)
chr7 (122-185)||(4048418-4048482)
chr7 (122-173)||(29019328-29019380)
chr7 (67-135)||(40081190-40081258)
[»] chr1 (35 HSPs)
chr1 (26-209)||(33650382-33650567)
chr1 (42-167)||(52913165-52913292)
chr1 (69-209)||(7489880-7490024)
chr1 (69-207)||(52913017-52913158)
chr1 (39-211)||(33650582-33650756)
chr1 (73-193)||(40892516-40892636)
chr1 (27-209)||(26879571-26879754)
chr1 (79-211)||(50727593-50727726)
chr1 (39-139)||(18608633-18608733)
chr1 (79-193)||(7489959-7490074)
chr1 (27-186)||(18608749-18608909)
chr1 (67-131)||(52913034-52913098)
chr1 (72-139)||(2633538-2633605)
chr1 (42-131)||(1173075-1173162)
chr1 (26-139)||(2633325-2633438)
chr1 (39-136)||(34173316-34173412)
chr1 (67-191)||(18204923-18205045)
chr1 (69-135)||(40892571-40892637)
chr1 (26-136)||(52913320-52913430)
chr1 (122-193)||(34173318-34173390)
chr1 (67-134)||(50727642-50727709)
chr1 (106-186)||(1173262-1173343)
chr1 (42-138)||(2633201-2633297)
chr1 (142-194)||(7490018-7490070)
chr1 (79-186)||(38698861-38698964)
chr1 (132-193)||(2633538-2633600)
chr1 (46-191)||(18980993-18981138)
chr1 (122-193)||(18608638-18608710)
chr1 (69-136)||(30611887-30611954)
chr1 (69-113)||(52913160-52913204)
chr1 (106-141)||(18608581-18608616)
chr1 (76-121)||(2633444-2633489)
chr1 (73-133)||(6314295-6314353)
chr1 (122-193)||(52913199-52913272)
chr1 (162-210)||(2633610-2633657)
[»] scaffold0279 (2 HSPs)
scaffold0279 (39-193)||(1117-1272)
scaffold0279 (73-136)||(1211-1274)
[»] scaffold0157 (2 HSPs)
scaffold0157 (39-211)||(21502-21675)
scaffold0157 (39-201)||(21702-21866)
[»] scaffold0002 (2 HSPs)
scaffold0002 (39-209)||(12035-12203)
scaffold0002 (81-186)||(12270-12373)
[»] scaffold0578 (2 HSPs)
scaffold0578 (80-191)||(2400-2517)
scaffold0578 (73-132)||(2457-2517)
[»] scaffold0128 (2 HSPs)
scaffold0128 (60-185)||(2595-2720)
scaffold0128 (26-135)||(2440-2549)
[»] scaffold0571 (1 HSPs)
scaffold0571 (105-153)||(9066-9115)
[»] scaffold1191 (1 HSPs)
scaffold1191 (104-211)||(1222-1330)


Alignment Details
Target: chr4 (Bit Score: 174; Significance: 9e-94; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 23 - 235
Target Start/End: Original strand, 2470074 - 2470287
Alignment:
Q  23 aacgtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctc 122  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||| ||| ||| | |||||||||||    
T  2470074 aacgtttggttaacataaggactaaatcggaaaggtatacatactaaaaagacttatgtgtgaccaaaataacttaaaggaccaatatattacaaacctc 2470173  T
Q  123 aaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagcttaaaaaata 221  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2470174 aaatttaaaggacttatatgtgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggacccctggtgtaatttagcttaaaaaata 2470273  T
Q  222 ctattaaacttcac 235  Q
    ||||||||||||||    
T  2470274 ctattaaacttcac 2470287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 42 - 211
Target Start/End: Original strand, 45038361 - 45038531
Alignment:
Q  42 gactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat 141  Q
    ||||||||||||||  | |||| ||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||| |    
T  45038361 gactaaatcgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggacttattt 45038460  T
Q  142 -tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
     |||| ||||||||||||| |||||||||||||||||||| ||||| ||||||||  ||||||||||||||    
T  45038461 gtgacaaaaataacttaaatgaccaatctattacaaacctcaaacttaaaggatcattggtgtaatttagc 45038531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 37 - 211
Target Start/End: Original strand, 41083234 - 41083409
Alignment:
Q  37 ataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggact 136  Q
    |||||||||||||||||||  | |||| ||| ||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||| ||||| |||     
T  41083234 ataaggactaaatcgaaaacgtttacaaacttaaaggacttatgtgtgaccgaaataacttaaaagaccaatctgttacgaacctcaaacttaaatgaca 41083333  T
Q  137 tatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    ||||| |||||||||||||||||||||||||||| |||||||||| ||||| |||||| ||||  |||||||||||    
T  41083334 tatatgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggacccctattgtaatttagc 41083409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 60 - 209
Target Start/End: Complemental strand, 41083188 - 41083038
Alignment:
Q  60 tacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaa 158  Q
    |||| ||| ||||||||||||||||| |||||||||||||| ||| ||| |||||||||| ||||| ||||||||||||||| |||| ||||||||||||    
T  41083188 tacaaacttaaaggacttatgtgtgatcaaaataacttaaaggaccaatatgttacaaacttcaaacttaaaggacttatatgtgacaaaaataacttaa 41083089  T
Q  159 aggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    | || |||| | |||||||||| ||||| |||||| |||| || |||||||    
T  41083088 atgatcaatatgttacaaacctcaaacttaaaggacccctagtataattta 41083038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 69 - 209
Target Start/End: Complemental strand, 7246117 - 7245976
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaat 167  Q
    ||||||||||||||| |||||||||||||||| ||| ||| |||||||||  ||||| ||||||||||||| | ||||||||||||||||||||| |||     
T  7246117 aaaggacttatgtgtaaccaaaataacttaaacgaccaatttgttacaaatatcaaacttaaaggacttatgtctgaccaaaataacttaaaggatcaac 7246018  T
Q  168 ctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    || |||||||| | ||||| |||||| ||| |||||||||||    
T  7246017 ctgttacaaacgtcaaacttaaaggaccccaggtgtaattta 7245976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 211
Target Start/End: Original strand, 12498802 - 12498975
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    |||||||||||||||||  | |||| | | ||| ||||||||||||||| |||||| ||||| || || ||||||||||| |||||| ||||||||||||    
T  12498802 aaggactaaatcgaaaacgtttacaaatttaaaagacttatgtgtgaccgaaataatttaaaggattagtctgttacaaatctcaaacttaaaggactta 12498901  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    | | |||  ||||||||||||| || ||||||||||||||||| ||||| ||||||  || |||||||||||||    
T  12498902 tgtgtgattaaaataacttaaatgatcaatctattacaaacctcaaacttaaaggactccgggtgtaatttagc 12498975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 186
Target Start/End: Complemental strand, 25056051 - 25055888
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaa--cctca 123  Q
    |||||||||||| ||||||||||| |||||  | |||||||| ||||| | |||||||||| ||||||||||||  ||  |||||||||||||  |||||    
T  25056051 gtttggttaacagaaggactaaatggaaaacatttacatacttaaaggtcatatgtgtgacaaaaataacttaatggaacaatctgttacaaaatcctca 25055952  T
Q  124 aatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    || |||||||| |||| | | |||||||||||||||||||| |||||||||||||||| |||||    
T  25055951 aacttaaaggatttatgtgtcaccaaaataacttaaaggacaaatctattacaaacctcaaact 25055888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 39 - 193
Target Start/End: Original strand, 53863500 - 53863656
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa-tttaaaggactt 137  Q
    ||||||||||| ||||| || |||| ||| ||||||||||||  |||||||||||||||||| ||| ||| |||||||| ||||||| || |||||||||    
T  53863500 aaggactaaattgaaaacttttacaaacttaaaggacttatgcatgaccaaaataacttaaaggaccaatttgttacaaccctcaaacttaaaaggactt 53863599  T
Q  138 atat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    || | |||| ||||||||||||| |||||||||||||||||| | ||||| ||||||    
T  53863600 atgtgtgactaaaataacttaaacgaccaatctattacaaacttgaaacttaaagga 53863656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 32 - 219
Target Start/End: Original strand, 55617527 - 55617713
Alignment:
Q  32 ttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    |||||| ||||||||||| |||||  | |||| ||| |||  ||||||||||||| ||||||||||||||||| ||| |||| ||||||||||| |||||    
T  55617527 ttaacaaaaggactaaattgaaaacatttacaaacttaaac-acttatgtgtgactaaaataacttaaaagacaaatatgttgcaaacctcaaacttaaa 55617625  T
Q  132 ggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagcttaaaaaa 219  Q
    || ||||  | | ||||||||||||||||| || |||||||||||||||| ||| | |||||||||||| ||||||||| | |||||||    
T  55617626 gg-cttacgtgttaccaaaataacttaaagaactaatctattacaaacctcaaatttaaaggatccctgatgtaatttaacctaaaaaa 55617713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 32 - 219
Target Start/End: Original strand, 55624831 - 55625017
Alignment:
Q  32 ttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    |||||| ||||||||||| |||||  | |||| ||| |||  ||||||||||||| ||||||||||||||||| ||| |||| ||||||||||| |||||    
T  55624831 ttaacaaaaggactaaattgaaaacatttacaaacttaaac-acttatgtgtgactaaaataacttaaaagacaaatatgttgcaaacctcaaacttaaa 55624929  T
Q  132 ggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagcttaaaaaa 219  Q
    || ||||  | | ||||||||||||||||| || |||||||||||||||| ||| | |||||||||||| ||||||||| | |||||||    
T  55624930 gg-cttacgtgttaccaaaataacttaaagaactaatctattacaaacctcaaatttaaaggatccctgatgtaatttaacctaaaaaa 55625017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 76 - 198
Target Start/End: Complemental strand, 40395217 - 40395094
Alignment:
Q  76 ttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattac 174  Q
    |||||||||||||||||||||||||  |||||| |||||||||||||||| ||||||||||||||| |||| |||||||| |||||||||||||| | ||    
T  40395217 ttatgtgtgaccaaaataacttaaagaactaatatgttacaaacctcaaacttaaaggacttatatgtgacaaaaataacctaaaggaccaatctgtaac 40395118  T
Q  175 aaaccttaaactgaaaggatccct 198  Q
    ||| || ||||| |||||| ||||    
T  40395117 aaatctcaaacttaaaggacccct 40395094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 27 - 164
Target Start/End: Complemental strand, 53863484 - 53863346
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    |||||||||||||| |||||||| ||||  || |||| ||| |||||||||||||||||| ||||||||||||| ||| ||||||||||||| ||| ||     
T  53863484 tttggttaacataaagactaaattgaaatcttttacaaacttaaaggacttatgtgtgactaaaataacttaaaggaccaatctgttacaaatctcgaac 53863385  T
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggacc 164  Q
    ||||| ||||||| | ||| |||||||||||||||||||    
T  53863384 ttaaatgacttatgtgtgatcaaaataacttaaaggacc 53863346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 210
Target Start/End: Complemental strand, 40147119 - 40146935
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||||||||||| ||||  |||||  | ||||  || |||||||| |||||||||||||||||| |||  ||  ||||| ||||||||||||||    
T  40147119 gtttggttaacataaggaataaactgaaaacatttacaaccttaaaggactcatgtgtgaccaaaataacctaag-gatcaatctattacaaacctcaaa 40147021  T
Q  126 tttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttag 210  Q
     || |||||||||| | |||||||||||||||||| ||| ||||||| |||||||| ||||| ||| |||||||| ||||| ||||    
T  40147020 cttcaaggacttatgtgtgaccaaaataacttaaatgacaaatctatcacaaacctcaaacttaaaagatccctgatgtaaattag 40146935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 193
Target Start/End: Complemental strand, 2470049 - 2469899
Alignment:
Q  42 gactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat 141  Q
    ||||||||||||||| | |||| ||| |||| |||||| |||||||||| ||| ||||| ||| ||| | ||||||| |||||| ||||||||||||  |    
T  2470049 gactaaatcgaaaaggtttacaaacttaaag-acttatatgtgaccaaa-taatttaaaggaccaatatattacaaagctcaaacttaaaggacttaggt 2469952  T
Q  142 -tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
     ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||    
T  2469951 gtgaccaaaataacttaaagaaccaatctattacaaacctcaaacttaaagga 2469899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 201
Target Start/End: Complemental strand, 12498775 - 12498611
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    ||||||||||| ||||  || |||| ||| |||||| ||||||||||||||||||||||||||||  ||| | || ||||||| ||| ||||| ||||||    
T  12498775 aaggactaaattgaaattttttacaaacttaaaggatttatgtgtgaccaaaataacttaaaagatcaatatattgcaaaccttaaacttaaaagactta 12498676  T
Q  139 tat-tgaccaaaataactt-aaaggaccaatctattacaaaccttaaactgaaaggatccctggt 201  Q
    | | |||| |||||||||| |||||||||||||||||||||||| ||| | || ||| |||||||    
T  12498675 tgtgtgacaaaaataacttaaaaggaccaatctattacaaacctcaaatttaatggacccctggt 12498611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 80 - 211
Target Start/End: Original strand, 21321993 - 21322125
Alignment:
Q  80 gtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaac 178  Q
    |||| |||||||||| ||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||||||||| ||  ||| | ||||||||    
T  21321993 gtgtaaccaaaataagttaaaggaccaatcttttacaaacctcaaacttaaaggacttatatgtgaccaaaataacttaaaagaaaaatgtgttacaaac 21322092  T
Q  179 cttaaactgaaaggatccctggtgtaatttagc 211  Q
    || ||||| ||||||  | ||||||||||||||    
T  21322093 ctcaaacttaaaggactcatggtgtaatttagc 21322125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 195
Target Start/End: Original strand, 7246204 - 7246363
Alignment:
Q  37 ataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggact 136  Q
    ||||||||||||| ||||| || |||| ||| |||| ||||||||||||  |||||||  ||||  || ||||| || |||| |||||| ||||||||||    
T  7246204 ataaggactaaattgaaaacttttacaaacttaaagtacttatgtgtgataaaaataaactaaagaaccaatctattccaaatctcaaacttaaaggact 7246303  T
Q  137 tatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatc 195  Q
    ||| | |||||||||||||||||| ||||||| | |||||||||| ||||| ||||||||    
T  7246304 tatgtatgaccaaaataacttaaaagaccaatatgttacaaacctcaaacttaaaggatc 7246363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 210
Target Start/End: Complemental strand, 11884785 - 11884598
Alignment:
Q  25 cgtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaa 124  Q
    ||||||||||| | |||||||||||||||||  | |||| ||| |||| |||||  |||||| ||||||| || || ||| |||||||||||||||||||    
T  11884785 cgtttggttaatagaaggactaaatcgaaaatgtttacaaacttaaagaacttagttgtgactaaaataaattgaaggaccaatctgttacaaacctcaa 11884686  T
Q  125 atttaaaggacttatat-tgaccaaaataactt-aaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttag 210  Q
    | ||||||||||||| | |||| |||||||||| ||||||  ||| | |||||||||| ||| | |||||| ||  ||||||||||||    
T  11884685 acttaaaggacttatgtgtgacaaaaataacttaaaaggattaatttgttacaaacctcaaatttaaaggaccctcggtgtaatttag 11884598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 17232096 - 17231990
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||||| ||| ||||||| |||||  | |||| ||| ||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  17232096 gtttggttaacagaagaactaaattgaaaacgtttacaaacttaaaagacttatgtgtgatcaaaataacttaaaagacttatctgttacaaacctcaaa 17231997  T
Q  126 tttaaag 132  Q
     ||||||    
T  17231996 cttaaag 17231990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 178
Target Start/End: Original strand, 9999476 - 9999610
Alignment:
Q  43 actaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat- 141  Q
    ||||||| ||||| || |||| | | ||| ||||||| |||||| ||||||||||||| ||| |||||||||||||||||||| |||||  ||| || |     
T  9999476 actaaattgaaaacttttacaaagttaaatgacttatatgtgacaaaaataacttaaatgaccaatctgttacaaacctcaaacttaaa--actaatgtg 9999573  T
Q  142 tgaccaaaataacttaaaggaccaatctattacaaac 178  Q
    |||||||||||||||||| ||||||||||||||||||    
T  9999574 tgaccaaaataacttaaatgaccaatctattacaaac 9999610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 39 - 186
Target Start/End: Original strand, 12592372 - 12592520
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    ||||||||||||||||| || |||| ||| ||| ||||||||| ||||||| |||||||||||||  ||||| |||||||| ||||| |||||||||| |    
T  12592372 aaggactaaatcgaaaacttttacaaacttaaaagacttatgtatgaccaatataacttaaaagatcaatctattacaaacttcaaacttaaaggactaa 12592471  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    ||| |||| ||||||| |||||  | |||| ||||| |||||| |||||    
T  12592472 tatgtgactaaaataaattaaaaaatcaatttattataaacctcaaact 12592520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 40395281 - 40395377
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||||||||||||||  | |||| | | ||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||| |||||    
T  40395281 aaggactaaatcgaaaacgtttacaaatttaaaggacttatgtgtgacagaaataacttaaaggactaatctgttacaaacctcaaatttagaggac 40395377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 26782459 - 26782353
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||||||||||||||||| ||||| || |||| ||| ||| |||||| ||||||||||||||||||||| ||| |||||||||||||  |||||     
T  26782459 tttggttaacataaggactaaattgaaaatttttacaaacttaaaagactta-gtgtgaccaaaataacttaaaggaccaatctgttacaaatatcaaac 26782361  T
Q  127 ttaaagga 134  Q
    ||||||||    
T  26782360 ttaaagga 26782353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 193
Target Start/End: Original strand, 24684233 - 24684382
Alignment:
Q  42 gactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat 141  Q
    ||||||||||||||  | || | ||| ||||||||||||||||||  ||||||||||||  || |||||||||||||||||||| |||||| |||||  |    
T  24684233 gactaaatcgaaaacgtttataaacttaaaggacttatgtgtgactgaaataacttaaa--accaatctgttacaaacctcaaacttaaagaacttacgt 24684330  T
Q  142 tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
      |   |||||||||||| ||||||||||||| |||||| ||||| ||||||    
T  24684331 gtaatcaaataacttaaaagaccaatctattataaacctcaaacttaaagga 24684382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 193
Target Start/End: Original strand, 40147144 - 40147299
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    |||||||||||||||||  | |||| | | ||||||||||| |||||  ||||||||||||| |   ||| |||||||||||||||| |||||| |||||    
T  40147144 aaggactaaatcgaaaatgtttacaaatttaaaggacttatatgtgagaaaaataacttaaagggtcaatttgttacaaacctcaaacttaaagaactta 40147243  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    | | |||||||||  ||||||| ||||||| ||||| |||||| ||||| ||||||    
T  40147244 tgtgtgaccaaaacgacttaaatgaccaatttattataaacctcaaacttaaagga 40147299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 211
Target Start/End: Complemental strand, 46196235 - 46196092
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaat 167  Q
    ||||||||||| || |  | ||||| |||||| ||| ||| |||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||  ||    
T  46196235 aaaggacttatttgagctccaaatatcttaaaggaccaatttgttacaaacgtcaaacttaaaggacttatttgtgaccaaaataacttaaaggacatat 46196136  T
Q  168 ctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    ||||||||||| | ||||| ||| |||||   ||||||||||||    
T  46196135 ctattacaaacgtgaaacttaaaagatccgatgtgtaatttagc 46196092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 42 - 159
Target Start/End: Original strand, 24369249 - 24369367
Alignment:
Q  42 gactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat 141  Q
    ||||||||||||||  | |||| ||| |||||||||| ||||||| ||||||||||||| ||| ||||| |||||||||||||| |||||||| |||  |    
T  24369249 gactaaatcgaaaacatttacaaacttaaaggacttaggtgtgactaaaataacttaaaggacaaatctattacaaacctcaaacttaaaggaattaggt 24369348  T
Q  142 -tgaccaaaataacttaaa 159  Q
     ||||||||||||| ||||    
T  24369349 gtgaccaaaataacataaa 24369367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 21322042 - 21322109
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggact 136  Q
    ||||||||||| |||||||||||||||||||||||  ||| |||||||||||||||| ||||||||||    
T  21322042 aaaggacttatatgtgaccaaaataacttaaaagaaaaatgtgttacaaacctcaaacttaaaggact 21322109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 211
Target Start/End: Complemental strand, 45038311 - 45038171
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttata-ttgaccaaaataacttaaaggaccaat 167  Q
    ||||||||||||||||||| |||||||||||  ||| ||||||||| |||||| ||| ||   | |||||||  |||||||||||||||||| || ||||    
T  45038311 aaaggacttatgtgtgaccgaaataacttaacggaccaatctgttataaaccttaaactt---gaacttatacgtgaccaaaataacttaaaagatcaat 45038215  T
Q  168 ctattacaaaccttaaactgaaaggatccctgg-tgtaatttagc 211  Q
     |||||||||||| ||||| ||| || |||||| |||||||||||    
T  45038214 atattacaaacctcaaacttaaa-gaaccctggatgtaatttagc 45038171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 70 - 209
Target Start/End: Original strand, 2788107 - 2788247
Alignment:
Q  70 aaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatc 168  Q
    |||||||||| | |||||||||| ||||||| ||  ||| | |||||||||| ||| |||||||| |||| | ||||||||||||||||||  | ||||     
T  2788107 aaggacttatctctgaccaaaatgacttaaaggatcaattttttacaaaccttaaacttaaaggatttatgtgtgaccaaaataacttaaaatatcaatt 2788206  T
Q  169 tattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    | |||||||||| ||||| |||| || | ||||||||||||    
T  2788207 tgttacaaacctcaaacttaaagaattcttggtgtaattta 2788247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 26782471 - 26782571
Alignment:
Q  35 acataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaagga 134  Q
    ||||||||||||||| ||||| || |||| ||| ||| ||||||| |||||| |||||||||||||| |  ||| | |||||||||||||| ||||||||    
T  26782471 acataaggactaaattgaaaacttttacaaacttaaaagacttatatgtgacaaaaataacttaaaaaatcaatatattacaaacctcaaacttaaagga 26782570  T
Q  135 c 135  Q
    |    
T  26782571 c 26782571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 186
Target Start/End: Complemental strand, 45038345 - 45038253
Alignment:
Q  95 cttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    |||||| ||| ||||||||| ||| |||||| ||||||||||||| | ||||| ||||||||||| |||||||||| ||| ||||||||||||    
T  45038345 cttaaaggaccaatctgttataaatctcaaacttaaaggacttatgtgtgaccgaaataacttaacggaccaatctgttataaaccttaaact 45038253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 119
Target Start/End: Complemental strand, 51950625 - 51950545
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaac 119  Q
    ||||||||||| |||||  | |||| ||| |||||||||||||||||||||||||||||||||||  |||||| |||||||    
T  51950625 aaggactaaattgaaaacatttacaaacttaaaggacttatgtgtgaccaaaataacttaaaagatcaatctgctacaaac 51950545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 178
Target Start/End: Complemental strand, 2788052 - 2787901
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||||| || |||||| | |||||  | |||| ||| ||| ||||||||||||||||||||||||||||  || ||| |||||||||||| |||    
T  2788052 gtttggttaacagaaagactaatt-gaaaacatttacaaacttaaatgacttatgtgtgaccaaaataacttaaa--acaaatatgttacaaaccttaaa 2787956  T
Q  126 tttaaaggacttatat-tgaccaaaataactta-aaggaccaatctattacaaac 178  Q
     ||||| ||||||| |   |||||||||||||| || |||| |||||||||||||    
T  2787955 cttaaatgacttatgtgcaaccaaaataacttataaagaccgatctattacaaac 2787901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 216
Target Start/End: Original strand, 25056151 - 25056256
Alignment:
Q  112 ttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttag 210  Q
    |||||||||||||| ||||| ||||| | | | |||||||||||||||| ||||||| | |||||||||| ||||| ||| ||  |||||||||||||||    
T  25056151 ttacaaacctcaaacttaaatgacttttgtctcaccaaaataacttaaaagaccaatttgttacaaacctcaaacttaaaagactcctggtgtaatttag 25056250  T
Q  211 cttaaa 216  Q
    | ||||    
T  25056251 cctaaa 25056256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 41519309 - 41519204
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    ||||||||||||||| ||| |||| |||||  | |||| ||| ||||||||||| | |||| ||||||||||| | ||| ||||| ||| ||||||||||    
T  41519309 gtttggttaacataaagaccaaattgaaaacgtttacaaacttaaaggacttatttttgactaaaataacttagatgacaaatctattagaaacctcaaa 41519210  T
Q  126 tttaaa 131  Q
    ||||||    
T  41519209 tttaaa 41519204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 53863589 - 53863658
Alignment:
Q  67 taaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggact 136  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||| |||||||| | ||| ||||||||||    
T  53863589 taaaaggacttatgtgtgactaaaataacttaaacgaccaatctattacaaacttgaaacttaaaggact 53863658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 11884798 - 11884897
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    ||||||||||||||||  || |||| ||| |||| |||||| |||||||||| ||| ||||| ||| |||||||||||||| | ||| ||||||||||||    
T  11884798 aaggactaaatcgaaacatt-tacaaacttaaagaacttatttgtgaccaaattaatttaaaggaccaatctgttacaaacttaaaacttaaaggactta 11884896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 2788166 - 2788229
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaag 132  Q
    |||||| |||||||||||||||||||||||||| |  ||| |||||||||||||||| ||||||    
T  2788166 aaaggatttatgtgtgaccaaaataacttaaaatatcaatttgttacaaacctcaaacttaaag 2788229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 25055946 - 25055884
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    |||||| |||||||| |||||||||||||||| ||| ||||| |||||||||||||| |||||    
T  25055946 aaaggatttatgtgtcaccaaaataacttaaaggacaaatctattacaaacctcaaacttaaa 25055884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 186
Target Start/End: Original strand, 45787251 - 45787361
Alignment:
Q  74 acttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctatt 172  Q
    |||||||||||| ||||||||||||||| |||||| | ||||||||||  || |||||| || ||| | ||||||||||||||||||  | |||| ||||    
T  45787251 acttatgtgtgatcaaaataacttaaaaaactaatttattacaaacct--aacttaaagaac-tatgtgtgaccaaaataacttaaaaaatcaatttatt 45787347  T
Q  173 acaaaccttaaact 186  Q
    |||||||| |||||    
T  45787348 acaaacctcaaact 45787361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 186
Target Start/End: Complemental strand, 12592347 - 12592187
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||| ||| || |||||||| |||||  | |||| ||| | | || ||||||||||||||||||||||||| ||  |||||||||||||  |||||    
T  12592347 gtttggttgacagaatgactaaattgaaaacgtttacaaacttacaagatttatgtgtgaccaaaataacttaaatgatcaatctgttacaaatttcaaa 12592248  T
Q  126 tttaaaggacttat-attgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
       |||  ||||||  || ||||||||||||||||  |||||||| |||||||||| |||||    
T  12592247 cacaaataacttatgtttaaccaaaataacttaaa-aaccaatctgttacaaacctcaaact 12592187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 41519334 - 41519419
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaa 124  Q
    ||||| |||||| ||||  | |||| ||| ||| |||||||||||||| ||||| ||||||| ||||||||||||| |||||||||    
T  41519334 aaggattaaatcaaaaatgtttacaaacttaaaagacttatgtgtgactaaaatgacttaaatgactaatctgttaaaaacctcaa 41519419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 215
Target Start/End: Complemental strand, 45787142 - 45787001
Alignment:
Q  75 cttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctatta 173  Q
    ||||||||| |||||||||| ||||| ||  ||||||||||||||||||||  ||| |||||| | | | |||||||||||||||| | | | | | |||    
T  45787142 cttatgtgtaaccaaaataagttaaatgatcaatctgttacaaacctcaaacgtaagggacttctgtgtaaccaaaataacttaaaagcctagtatgtta 45787043  T
Q  174 caaaccttaaactgaaaggatccctggtgtaatttagcttaa 215  Q
    |||| || ||||| |||||| | ||||| ||||||| |||||    
T  45787042 caaagctcaaacttaaaggacctctggtttaatttaacttaa 45787001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 24369269 - 24369341
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    |||| ||||||||||||  | |||| ||||||||||||||||| |||||||||||||||| ||||| ||||||    
T  24369269 caaacttaaaggacttaggtgtgactaaaataacttaaaggacaaatctattacaaacctcaaacttaaagga 24369341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 41519439 - 41519491
Alignment:
Q  83 tgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||| ||||||||||||||||||||| ||||| |||||||||| |||||||||    
T  41519439 tgacaaaaataacttaaaagactaatttgttagaaacctcaaacttaaaggac 41519491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 209
Target Start/End: Complemental strand, 9999407 - 9999273
Alignment:
Q  76 ttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa-tttaaaggacttatat-tgaccaaaataacttaaaggaccaatctatta 173  Q
    |||||||||||||| ||||||||||| || ||| ||||| |||| ||||| |||||||||||||| | ||| || || ||| |||||||  ||||| |||    
T  9999407 ttatgtgtgaccaatataacttaaaa-accaatatgttagaaacatcaaactttaaaggacttatgtgtgatcagaacaacctaaaggataaatctgtta 9999309  T
Q  174 caaaccttaaactgaaaggatccctggtgtaattta 209  Q
    ||||||| | ||| |||||| | ||| |||||||||    
T  9999308 caaacctcagacttaaaggaccgctgatgtaattta 9999273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 25056184 - 25056235
Alignment:
Q  85 accaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggact 136  Q
    |||||||||||||||||||| ||| |||||||||||||||| ||||| ||||    
T  25056184 accaaaataacttaaaagaccaatttgttacaaacctcaaacttaaaagact 25056235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 44057279 - 44057366
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaa 159  Q
    ||||||||| |||| ||||||||||||| ||| ||| | ||||||| |||||| ||||| ||||||| | | ||||||||||||||||    
T  44057279 gacttatgtatgactaaaataacttaaatgaccaatttattacaaatctcaaacttaaatgacttatgtgtaaccaaaataacttaaa 44057366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 135
Target Start/End: Complemental strand, 45787085 - 45787022
Alignment:
Q  72 ggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||| ||||| |||||||||||||||||| ||| | ||||||||| |||||| |||||||||    
T  45787085 ggacttctgtgtaaccaaaataacttaaaagcctagtatgttacaaagctcaaacttaaaggac 45787022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 46196292 - 46196419
Alignment:
Q  31 gttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaa 130  Q
    ||||||| ||||||||||| |||||  | | || ||| |||  |||||| || | | ||||||||||||  | | |||||||||||||||||||| ||||    
T  46196292 gttaacagaaggactaaattgaaaatgtttgcaaacttaaaatacttatttgcgcctaaaataacttaatggtccaatctgttacaaacctcaaacttaa 46196391  T
Q  131 aggacttatat-tgaccaaaataactta 157  Q
    ||||||||| | |||| |||||||||||    
T  46196392 aggacttatgtatgacaaaaataactta 46196419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 17236839 - 17236773
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||||||||||||||||||||||||||||| |||| || | |||||||  | ||| |||||||||    
T  17236839 aaaggacttatgtgtgaccaaaataacttaaatgacttatttattacaaattttaaacttaaaggac 17236773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 40395164 - 40395098
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    ||||||||||| |||||| |||||||| |||| ||| ||||||| ||||| |||||| |||||||||    
T  40395164 aaaggacttatatgtgacaaaaataacctaaaggaccaatctgtaacaaatctcaaacttaaaggac 40395098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 46196390 - 46196456
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    ||||||||||||| |||| ||||||||||| | |||| |||||||| |||| ||||| |||||||||    
T  46196390 aaaggacttatgtatgacaaaaataacttacatgacttatctgttataaacgtcaaacttaaaggac 46196456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 50290248 - 50290181
Alignment:
Q  67 taaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggact 136  Q
    |||||| | |||||||||||||||||||||||||  || ||| ||| |||||||||||| ||||||||||    
T  50290248 taaaagtatttatgtgtgaccaaaataacttaaa--accaatttgtaacaaacctcaaacttaaaggact 50290181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 7246161 - 7246068
Alignment:
Q  85 accaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaa 177  Q
    |||||||| ||||||| ||  |||||||||||||  | ||| ||||||||||||| | | |||||||||||||||| ||||||| | |||||||    
T  7246161 accaaaattacttaaaggatcaatctgttacaaatataaaacttaaaggacttatgtgtaaccaaaataacttaaacgaccaatttgttacaaa 7246068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 9999495 - 9999560
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    |||| ||||| ||||||||| |||| ||||||||||||| ||||||||| |||||||||| |||||    
T  9999495 caaagttaaatgacttatatgtgacaaaaataacttaaatgaccaatctgttacaaacctcaaact 9999560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 186
Target Start/End: Original strand, 50290395 - 50290468
Alignment:
Q  114 acaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    |||||||||||| |||||  |||||| | |||||||||||||||||| || |||| |||||||||||| |||||    
T  50290395 acaaacctcaaacttaaaaaacttatgtgtgaccaaaataacttaaatgatcaatttattacaaacctcaaact 50290468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 50290415 - 50290472
Alignment:
Q  74 acttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    ||||||||||||||||||||||||||| ||  ||| | |||||||||||||| |||||    
T  50290415 acttatgtgtgaccaaaataacttaaatgatcaatttattacaaacctcaaacttaaa 50290472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 193
Target Start/End: Original strand, 51950666 - 51950816
Alignment:
Q  42 gactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat 141  Q
    |||||||| |||||  | |||| ||| ||||||||||||| | |||||| |||||||||  || ||| | ||  ||||||| || ||||||||||||  |    
T  51950666 gactaaattgaaaatgtttacaaacttaaaggacttatgtataaccaaattaacttaaagaaccaatttattgtaaacctcgaacttaaaggacttaagt 51950765  T
Q  142 -tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
     | |||||||||| |  ||||||||||||||||||||| | ||||| ||||||    
T  51950766 gtaaccaaaataatt--aaggaccaatctattacaaacttcaaacttaaagga 51950816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 17236840 - 17236752
Alignment:
Q  128 taaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagcttaa 215  Q
    |||||||||||| | |||||||||||||||||| |||  || |||||||||  ||||||| |||||| ||| | ||||||||| |||||    
T  17236840 taaaggacttatgtgtgaccaaaataacttaaatgacttatttattacaaattttaaacttaaaggaccccagatgtaatttaacttaa 17236752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 53863449 - 53863393
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaa 177  Q
    |||| ||||||||||||| | |||| ||||||||||||||||||||||| |||||||    
T  53863449 caaacttaaaggacttatgtgtgactaaaataacttaaaggaccaatctgttacaaa 53863393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 177
Target Start/End: Complemental strand, 26782404 - 26782369
Alignment:
Q  142 tgaccaaaataacttaaaggaccaatctattacaaa 177  Q
    |||||||||||||||||||||||||||| |||||||    
T  26782404 tgaccaaaataacttaaaggaccaatctgttacaaa 26782369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 40147234 - 40147301
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggact 136  Q
    |||| ||||||||||||||||||  ||||||| ||| ||| | ||| |||||||||| ||||||||||    
T  40147234 aaagaacttatgtgtgaccaaaacgacttaaatgaccaatttattataaacctcaaacttaaaggact 40147301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 40395304 - 40395363
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaacct 180  Q
    |||||||||||||||||| | ||||  |||||||||||||||| ||||| ||||||||||    
T  40395304 caaatttaaaggacttatgtgtgacagaaataacttaaaggactaatctgttacaaacct 40395363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 9999354 - 9999288
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    ||||||||||||||||| || || ||| |||| ||  |||||||||||||||||| | |||||||||    
T  9999354 aaaggacttatgtgtgatcagaacaacctaaaggataaatctgttacaaacctcagacttaaaggac 9999288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 9999569 - 9999623
Alignment:
Q  78 atgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaag 132  Q
    ||||||||||||||||||||||| ||| ||||| |||||||| || || ||||||    
T  9999569 atgtgtgaccaaaataacttaaatgaccaatctattacaaacttctaacttaaag 9999623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 24684337 - 24684383
Alignment:
Q  89 aaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||||||||||||| ||||| ||| |||||||||| |||||||||    
T  24684337 aaataacttaaaagaccaatctattataaacctcaaacttaaaggac 24684383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 26782498 - 26782588
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    |||| ||||| ||||||||| |||| |||||||||||||  | |||| |||||||||||| ||||| |||||| |||   |||||||||||    
T  26782498 caaacttaaaagacttatatgtgacaaaaataacttaaaaaatcaatatattacaaacctcaaacttaaaggaccccaaatgtaatttagc 26782588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 45787311 - 45787365
Alignment:
Q  77 tatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    ||||||||||||||||||||||||| |  ||| | |||||||||||||| |||||    
T  45787311 tatgtgtgaccaaaataacttaaaaaatcaatttattacaaacctcaaacttaaa 45787365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 12698010 - 12698052
Alignment:
Q  74 acttatgtgtgaccaaaataacttaaaagactaatctgttacaaa 118  Q
    |||||||||||||||||||||||||||  | ||||||||||||||    
T  12698010 acttatgtgtgaccaaaataacttaaa--attaatctgttacaaa 12698052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 11884820 - 11884892
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    |||| |||||| |||||| | |||||||| ||| ||||||||||||||| |||||||| | ||||| ||||||    
T  11884820 caaacttaaagaacttatttgtgaccaaattaatttaaaggaccaatctgttacaaacttaaaacttaaagga 11884892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 12592395 - 12592467
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    |||| ||||| ||||||| | ||||||| |||||||||| || ||||||||||||||| | ||||| ||||||    
T  12592395 caaacttaaaagacttatgtatgaccaatataacttaaaagatcaatctattacaaacttcaaacttaaagga 12592467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 14984063 - 14984123
Alignment:
Q  148 aaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattt 208  Q
    |||||||||||||||||||| | |||||||| | ||||| |||||| | ||| ||||||||    
T  14984063 aaataacttaaaggaccaatatgttacaaacatcaaacttaaaggacctctgatgtaattt 14984123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 17389110 - 17389054
Alignment:
Q  155 ttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    ||||| ||||||||| |||||||| | ||| | ||||||||||| ||||||||||||    
T  17389110 ttaaaagaccaatctgttacaaacataaaatttaaaggatccctagtgtaatttagc 17389054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 51950504 - 51950468
Alignment:
Q  99 aaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  51950504 aaagacttatctgttacaaacctcaaacttaaaggac 51950468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 2e-51; HSPs: 77)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 35461604 - 35461418
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||| ||||||||||||||||||| || |||| ||| ||||||||||| ||||| |||||||| ||||| ||| |||||||||||||| |||||    
T  35461604 gtttggttaatataaggactaaatcgaaaacttttacaaacttaaaggacttatttgtgatcaaaataatttaaaggaccaatctgttacaaacttcaaa 35461505  T
Q  126 tttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
     ||| ||||||||| | |||||||||||||||||||||||||| |||||||||||| ||||| |||||| || ||||||||||||||    
T  35461504 cttacaggacttatgtgtgaccaaaataacttaaaggaccaatatattacaaacctcaaacttaaaggacccgtggtgtaatttagc 35461418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 27 - 210
Target Start/End: Complemental strand, 16327265 - 16327081
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||||||||||||||||| |||||  | |||| ||| ||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||     
T  16327265 tttggttaacataaggactaaattgaaaacgtttacaaacttaaaggacttatgtgttaccaaaataacttaaacgaccaatctgttacaaacctcaaac 16327166  T
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttag 210  Q
    ||||||||||||| |  ||| ||||||||||||| || |||||||||||||||||  |||| |||||| | ||||||||||||||    
T  16327165 ttaaaggacttatgtgcgactaaaataacttaaacgatcaatctattacaaacctctaacttaaaggacctctggtgtaatttag 16327081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 193
Target Start/End: Complemental strand, 1996310 - 1996142
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    ||||||||| || || |||||||| |||||  | |||| ||| | |||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  1996310 gtttggttatcaaaaagactaaattgaaaacgtttacaaacttataggacttatgtgtgaccaaaataacttaaaggactaatctattacaaaccccaaa 1996211  T
Q  126 tttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
     |||||||| |||||| ||||||||||||||||||  | |||||| ||||||| || ||||| ||||||    
T  1996210 cttaaaggatttatatgtgaccaaaataacttaaaatatcaatctgttacaaatctcaaacttaaagga 1996142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 193
Target Start/End: Complemental strand, 25456443 - 25456276
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    ||||| |||| | |||||||||||||||||  | |||  ||| ||| ||||||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  25456443 gtttgcttaatagaaggactaaatcgaaaacatttaccaacttaaaagacttatttgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaa 25456344  T
Q  126 tttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
     ||||||||||||| | ||| ||||||||||| |||||||||| | |||||||||| ||||| ||||||    
T  25456343 cttaaaggacttatgtgtgatcaaaataactt-aaggaccaatatgttacaaacctaaaacttaaagga 25456276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 39 - 209
Target Start/End: Original strand, 10827287 - 10827459
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa-tttaaaggactt 137  Q
    |||||||||||||||||  | |||| ||| ||||||||| | |||||||||||||| ||||| ||  ||||||||||||| |||||| || |||||||||    
T  10827287 aaggactaaatcgaaaacgtttacaaacttaaaggacttgtttgtgaccaaaataatttaaaggatcaatctgttacaaaactcaaacttaaaaggactt 10827386  T
Q  138 at-attgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    || | ||||||||| |||||||||||||||| |||||||||||| ||||| ||| || | ||| |||||||||    
T  10827387 atgagtgaccaaaacaacttaaaggaccaatttattacaaacctcaaacttaaatgacctctgatgtaattta 10827459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 27 - 209
Target Start/End: Original strand, 23662048 - 23662232
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaaga-ctaatctgttacaaacctcaaa 125  Q
    ||||||||||| ||||||||||| ||||| || |||| |||  ||||| ||||||  ||| |||||||||||||||| | ||| ||||||||| ||||||    
T  23662048 tttggttaacaaaaggactaaattgaaaacttttacaaacttgaaggagttatgtacgacaaaaataacttaaaagaaccaatttgttacaaatctcaaa 23662147  T
Q  126 tttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
     |||||| |||||| | | |||||||||||||||||||||||| |||||||||||| ||||| |||||   || |||||||||||    
T  23662148 cttaaagaacttatgtgtaaccaaaataacttaaaggaccaatttattacaaacctcaaacttaaagggctccaggtgtaattta 23662232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 20928000 - 20927829
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    |||||||||||||||||  | |||| ||| ||| ||||||  |||||||||||||||||||| ||| ||| | |||||||||||||||||||||||||||    
T  20928000 aaggactaaatcgaaaatgtttacaaacttaaaagacttacttgtgaccaaaataacttaaatgaccaatttattacaaacctcaaatttaaaggactta 20927901  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    | | | || ||||||||||||| || |||||||||||||| || ||||| ||| || || || |||||||||    
T  20927900 tgtgtaactaaaataacttaaatgatcaatctattacaaatctcaaacttaaaagacccatgatgtaattta 20927829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 76 - 218
Target Start/End: Original strand, 35461655 - 35461798
Alignment:
Q  76 ttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattac 174  Q
    |||| |||||| ||||||||||||| ||  ||||||||||||| |||||| ||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  35461655 ttatttgtgacaaaaataacttaaatgatcaatctgttacaaatctcaaaattaaatgacttatgtgtgaccaaaataacttaaaggaccaatctattac 35461754  T
Q  175 aaaccttaaactgaaaggatccctggtgtaatttagcttaaaaa 218  Q
    |||||| ||||| ||||||  |||| || |||||| | ||||||    
T  35461755 aaacctcaaacttaaaggacacctgatgcaatttaccctaaaaa 35461798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 39 - 193
Target Start/End: Original strand, 16327281 - 16327434
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    ||||||||||| |||||  | |||| ||| |||| |||||| |||||||||||||||||||| ||  |||||||||||||||||||| ||||||||||||    
T  16327281 aaggactaaattgaaaacgtttacaaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacttaaaggactta 16327380  T
Q  139 tattgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    |  || | ||||||||||||| ||  |||||||||||||||| ||||| ||||||    
T  16327381 t-gtgtctaaaataacttaaatgattaatctattacaaacctcaaacttaaagga 16327434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 28559393 - 28559235
Alignment:
Q  36 cataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||||| ||||| |||||  | |||| ||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| | ||  |||    
T  28559393 cataaggattaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaactgaattgac 28559294  T
Q  136 ttat-attgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    ||||   | || ||||||||||||||||||||||| |||||||| | ||||| ||||||    
T  28559293 ttatgcgtaacaaaaataacttaaaggaccaatctgttacaaacgtcaaacttaaagga 28559235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 167
Target Start/End: Complemental strand, 5746229 - 5746121
Alignment:
Q  60 tacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaa 158  Q
    |||| ||| ||||||||||||| | |||||||||||||||| ||| ||||||||| ||||||||||||||||| |||||| | |||||||||||||||||    
T  5746229 tacaaacttaaaggacttatgttttaccaaaataacttaaatgaccaatctgttataaacctcaaatttaaagaacttatgtgtgaccaaaataacttaa 5746130  T
Q  159 aggaccaat 167  Q
    | |||||||    
T  5746129 atgaccaat 5746121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 180
Target Start/End: Complemental strand, 14604235 - 14604082
Alignment:
Q  25 cgtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaa-gactaatctgttacaaacctca 123  Q
    ||||||||||||| ||||||||||| || ||  | |||| | | ||||||||||| ||||||||||||||| ||||| ||  ||||||||||||||||||    
T  14604235 cgtttggttaacagaaggactaaattgataaaatttacaaatttaaaggacttatatgtgaccaaaataacataaaatgatcaatctgttacaaacctca 14604136  T
Q  124 aatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaacct 180  Q
    || ||||||||||||| | |||||||||||||||    || |||||||||||||||||    
T  14604135 aacttaaaggacttatgtgtgaccaaaataactt----gatcaatctattacaaacct 14604082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 204
Target Start/End: Original strand, 35813515 - 35813646
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctat 171  Q
    ||||||||| ||| ||||||||||||||| || |||||||||||||||||| | ||||||||||||| | | ||||||||||||||||  || ||||| |    
T  35813515 gacttatgtatgagcaaaataacttaaaa-acaaatctgttacaaacctcacacttaaaggacttatgtgtaaccaaaataacttaaataactaatctgt 35813613  T
Q  172 tacaaaccttaaactgaaaggatccctggtgta 204  Q
    ||||||||||||||| ||| |||||||| ||||    
T  35813614 tacaaaccttaaacttaaatgatccctgatgta 35813646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 211
Target Start/End: Complemental strand, 32361288 - 32361150
Alignment:
Q  74 acttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctatt 172  Q
    |||||||| |||||||||||||||||  ||||||| |||||||||| ||||| |||||  |||||| | |||||||||||||||||| || |||||||||    
T  32361288 acttatgtatgaccaaaataacttaagggactaatttgttacaaacttcaaacttaaataacttatgtgtgaccaaaataacttaaatgatcaatctatt 32361189  T
Q  173 acaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    |||||| | ||| | ||||||   |||||||||||||||    
T  32361188 acaaacttcaaatttaaaggacttctggtgtaatttagc 32361150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 25456499 - 25456639
Alignment:
Q  81 tgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaacc 179  Q
    |||||||||||||||||||| ||| ||||| |||||||||||||| |||||| | |||| | |||| ||||||||||||| ||||||||| |||||||||    
T  25456499 tgtgaccaaaataacttaaaggaccaatctattacaaacctcaaacttaaagtatttatgtgtgactaaaataacttaaa-gaccaatctgttacaaacc 25456597  T
Q  180 ttaaactgaaaggatccctggtgtaatttagcttaaaaaata 221  Q
    | ||||| |||| | || ||| ||||||||||  ||||||||    
T  25456598 tcaaacttaaagaacccatggagtaatttagccaaaaaaata 25456639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 4943173 - 4943309
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaagga-cttatat-tgaccaaaataacttaaaggaccaa 166  Q
    ||||||||||||||||| |||||||| |||||  || ||| ||||||||| |||||| ||||| || ||||| | |||||||||||||||||| ||||||    
T  4943173 aaaggacttatgtgtgatcaaaataatttaaagtaccaatatgttacaaatctcaaacttaaaagaacttatgtgtgaccaaaataacttaaatgaccaa 4943272  T
Q  167 tctattacaaaccttaaactgaaaggatccctggtgt 203  Q
    ||||| |||||||| ||| | ||||||||| ||||||    
T  4943273 tctatcacaaacctcaaatttaaaggatccatggtgt 4943309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 193
Target Start/End: Original strand, 17400727 - 17400884
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtg--tgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggact 136  Q
    ||||||||||| |||||  | |||| | | ||||||||||||||  ||||||||| |||||| | ||| ||||||||||||| |||||| ||||||||||    
T  17400727 aaggactaaattgaaaacgtttacaaatttaaaggacttatgtgtgtgaccaaaacaacttacaggaccaatctgttacaaaactcaaacttaaaggact 17400826  T
Q  137 tatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    ||| | ||| |||||||||||||| ||||||| | ||||||| || ||||| ||||||    
T  17400827 tatgtgtgatcaaaataacttaaatgaccaatatgttacaaatctcaaacttaaagga 17400884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 19550248 - 19550422
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||||| ||||||||||| |||||||| |||  ||| ||| || ||| ||| |||||| |||||||||||||  |||||||||||||| |||||    
T  19550248 gtttggttaacagaaggactaaattgaaaagtt-tactaacttaaatgagttacgtgggaccaagataacttaaaagatcaatctgttacaaacatcaaa 19550346  T
Q  126 tttaaaggacttatattgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
     || ||||||||          ||||||||||||||| |||||| |||||||||| ||||| |||||| || ||||||| ||||||    
T  19550347 cttgaaggactt----------aaataacttaaaggaacaatctgttacaaacctcaaacttaaaggacccatggtgtattttagc 19550422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 1996338 - 1996483
Alignment:
Q  42 gactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat 141  Q
    ||||||||||||||    |||| ||| ||| | |||||| ||||||||||||| ||||| ||  ||||| |||||||||||||| ||||||||||||| |    
T  1996338 gactaaatcgaaaatccttacaaacttaaatggcttatgagtgaccaaaataatttaaaggaacaatctcttacaaacctcaaacttaaaggacttatct 1996437  T
Q  142 -tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
      |||||||||| | |||| |||||||||||||||||||| |||||    
T  1996438 gagaccaaaatatcataaatgaccaatctattacaaacctcaaact 1996483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 134
Target Start/End: Complemental strand, 7209956 - 7209848
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||||||||| ||||||| |||||  | |||| ||| |||||||||||||||||||||||||||||||| |||  || | ||||||||||||||    
T  7209956 gtttggttaacataagaactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaatgacgtatttattacaaacctcaaa 7209857  T
Q  126 tttaaagga 134  Q
      |||||||    
T  7209856 cataaagga 7209848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 216
Target Start/End: Complemental strand, 17400669 - 17400522
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaat 167  Q
    |||||||||||||| || ||||| |||||||| ||| ||| |||||||||  ||||| ||||| ||||||| | |||| |||||||||||||| ||||||    
T  17400669 aaaggacttatgtgagatcaaaagaacttaaaggaccaatttgttacaaatttcaaacttaaaagacttatgtgtgac-aaaataacttaaagaaccaat 17400571  T
Q  168 ctattacaaaccttaaactgaaaggatccctggtgtaatttagcttaaa 216  Q
     ||||||| |||| ||||| | ||||||| | |||||||||||| ||||    
T  17400570 ttattacacacctcaaacttagaggatccttagtgtaatttagcctaaa 17400522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 231
Target Start/End: Original strand, 12774319 - 12774526
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatact-aaaaggactt-atgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaa 124  Q
    ||||||||||| || |||||||| |||||  | |||| ||| |||||||||| ||| ||||||||||||||||||||||  ||| ||||| ||| |||||    
T  12774319 tttggttaacagaatgactaaattgaaaacgtttacaaacttaaaaggactttatgcgtgaccaaaataacttaaaagatcaatatgttagaaatctcaa 12774418  T
Q  125 atttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagcttaaaaaatact 223  Q
    | ||||||||||||| | |||| ||||||||||||| ||| || |||||| ||| || ||| | |||| | || || | ||||||| ||||||  ||||     
T  12774419 acttaaaggacttatgtgtgacaaaaataacttaaatgactaacctattataaagctcaaatttaaagaacccttgatataatttaacttaaatgatacc 12774518  T
Q  224 attaaact 231  Q
    ||||||||    
T  12774519 attaaact 12774526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 76 - 193
Target Start/End: Original strand, 35812135 - 35812253
Alignment:
Q  76 ttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattac 174  Q
    ||||||||||||||||||||||  | ||  |||| |||||||| |||||| ||||| |||||||   |||||||||||| ||||||||||||||||||||    
T  35812135 ttatgtgtgaccaaaataacttcgaggatcaatcagttacaaatctcaaacttaaatgacttatgcgtgaccaaaataatttaaaggaccaatctattac 35812234  T
Q  175 aaaccttaaactgaaagga 193  Q
    |||| ||||| | ||||||    
T  35812235 aaactttaaatttaaagga 35812253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 28559448 - 28559573
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaat 167  Q
    |||||||||||||||||| ||||||| ||||| ||| ||||||||| |||||||||| ||||||||||| | | |||||||||||   |||||||| |||    
T  28559448 aaaggacttatgtgtgactaaaataatttaaaggaccaatctgttataaacctcaaacttaaaggacttgtgtgtgaccaaaatactataaaggactaat 28559547  T
Q  168 ctattacaaaccttaaactgaaagga 193  Q
     | |||||||| | ||||| ||||||    
T  28559548 ttgttacaaacatcaaacttaaagga 28559573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 220
Target Start/End: Complemental strand, 19550220 - 19550073
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctat 171  Q
    ||||||||||| |||||||||||||||| ||  ||  ||||| ||| |||||| ||||| ||||||| | | ||||||||||||||||| | ||||||||    
T  19550220 gacttatgtgtaaccaaaataacttaaatgatcaaaatgttaaaaatctcaaacttaaaagacttatgtgtcaccaaaataacttaaagaatcaatctat 19550121  T
Q  172 tacaaaccttaaactgaaaggatccctggtgtaatttagcttaaaaaat 220  Q
    ||||||||| ||||| ||| || |||||  |||||||| | ||||||||    
T  19550120 tacaaacctcaaacttaaa-gacccctgcggtaatttaacctaaaaaat 19550073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 134
Target Start/End: Original strand, 36760767 - 36760875
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||| | ||||||||||| |||||  | |||| ||||||| ||||||||||||||| ||||||||||||  |   |||||||||||||||||||    
T  36760767 gtttggttaatagaaggactaaattgaaaatgtttacaaactaaaaagacttatgtgtgaccgaaataacttaaattatctatctgttacaaacctcaaa 36760866  T
Q  126 tttaaagga 134  Q
     ||||||||    
T  36760867 cttaaagga 36760875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 4943232 - 4943299
Alignment:
Q  67 taaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaagga 134  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||| | |||||||||||||||||||||    
T  4943232 taaaagaacttatgtgtgaccaaaataacttaaatgaccaatctatcacaaacctcaaatttaaagga 4943299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 231
Target Start/End: Original strand, 12713055 - 12713262
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatact-aaaaggactt-atgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaa 124  Q
    ||||||||||| || |||||||| |||||  | |||| ||| |||| ||||| ||| ||||||||||||||||||||||  ||| ||||| ||| |||||    
T  12713055 tttggttaacagaatgactaaattgaaaacgtttacaaacttaaaaagactttatgcgtgaccaaaataacttaaaagatcaatatgttagaaatctcaa 12713154  T
Q  125 atttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagcttaaaaaatact 223  Q
    | ||||||||||||| | |||| ||||||||||||| ||| || |||||| ||| || ||| | |||| | || || | ||||||| ||||||  ||||     
T  12713155 acttaaaggacttatgtgtgacaaaaataacttaaatgactaacctattataaagctcaaatttaaagaacccttgatataatttaacttaaatgatacc 12713254  T
Q  224 attaaact 231  Q
    ||||||||    
T  12713255 attaaact 12713262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 23661944 - 23661881
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaag 132  Q
    ||||||||||||||| |||||||||||||||||||  |||||||||||||| ||||||||||||    
T  23661944 aaaggacttatgtgtaaccaaaataacttaaaagatcaatctgttacaaacgtcaaatttaaag 23661881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 41 - 178
Target Start/End: Complemental strand, 23662030 - 23661894
Alignment:
Q  41 ggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttata 140  Q
    |||||||||  |||| || |||| ||| ||| ||||||||||||||||||||||||||||  |  ||||||| |||||  ||||| |||||||||||||     
T  23662030 ggactaaatttaaaacttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa--atcaatctgtcacaaatatcaaacttaaaggacttatg 23661933  T
Q  141 t-tgaccaaaataacttaaaggaccaatctattacaaac 178  Q
    | | |||||||||||||||| || |||||| ||||||||    
T  23661932 tgtaaccaaaataacttaaaagatcaatctgttacaaac 23661894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 41 - 178
Target Start/End: Original strand, 23796540 - 23796676
Alignment:
Q  41 ggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttata 140  Q
    |||||||||  |||| || |||| ||| ||| ||||||||||||||||||||||||||||  |  ||||||| |||||  ||||| |||||||||||||     
T  23796540 ggactaaatttaaaacttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa--atcaatctgtcacaaatatcaaacttaaaggacttatg 23796637  T
Q  141 t-tgaccaaaataacttaaaggaccaatctattacaaac 178  Q
    | | |||||||||||||||| || |||||| ||||||||    
T  23796638 tgtaaccaaaataacttaaaagatcaatctgttacaaac 23796676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 23796626 - 23796689
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaag 132  Q
    ||||||||||||||| |||||||||||||||||||  |||||||||||||| ||||||||||||    
T  23796626 aaaggacttatgtgtaaccaaaataacttaaaagatcaatctgttacaaacgtcaaatttaaag 23796689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 186
Target Start/End: Original strand, 4943069 - 4943231
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatact-aaaaggacttatgtgtgaccaaaataacttaaaa-gactaatctgttacaaacctcaa 124  Q
    ||||||||| | || |||||||| |||||  | |||| ||| ||||| |||||||||||||||||||||||||||| ||  ||||||||| |||  ||||    
T  4943069 tttggttaatagaatgactaaattgaaaatgtttacaaacttaaaagaacttatgtgtgaccaaaataacttaaaaggatcaatctgttataaatttcaa 4943168  T
Q  125 atttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    | ||||||||||||| | ||| |||||||| |||||| |||||| | ||||||| || |||||    
T  4943169 acttaaaggacttatgtgtgatcaaaataatttaaagtaccaatatgttacaaatctcaaact 4943231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 17400819 - 17400889
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttat 139  Q
    ||||||||||||||||| |||||||||||||| ||| ||| ||||||||| |||||| |||||||||||||    
T  17400819 aaaggacttatgtgtgatcaaaataacttaaatgaccaatatgttacaaatctcaaacttaaaggacttat 17400889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 20928052 - 20928170
Alignment:
Q  93 aacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaag 191  Q
    |||||||| ||| ||| ||||| ||| |||||| ||||||||||||| | |||||||||||||||||||||| ||||| ||| |||||| ||| | |||     
T  20928052 aacttaaatgaccaatttgttagaaaactcaaacttaaaggacttatgtgtgaccaaaataacttaaaggacaaatctgttataaacctcaaagttaaaa 20928151  T
Q  192 gatccctggtgtaatttag 210  Q
    || || |||||||||||||    
T  20928152 gacccatggtgtaatttag 20928170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 20928088 - 20928150
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||| |||||    
T  20928088 aaaggacttatgtgtgaccaaaataacttaaaggacaaatctgttataaacctcaaagttaaa 20928150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 35461712 - 35461774
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||||||    
T  35461712 gacttatgtgtgaccaaaataacttaaaggaccaatctattacaaacctcaaacttaaaggac 35461774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 36759771 - 36759665
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    ||||||||||||||| |||||||| |||||  | |||| ||| |||||||||||  ||||||||||||| |||||  ||| ||||||||||||| |||||    
T  36759771 gtttggttaacataatgactaaattgaaaacatttacaaacttaaaggacttataagtgaccaaaataatttaaagaacttatctgttacaaacatcaaa 36759672  T
Q  126 tttaaag 132  Q
     ||||||    
T  36759671 cttaaag 36759665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 5746273 - 5746374
Alignment:
Q  23 aacgtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctc 122  Q
    ||||||||||||||| || ||||||||  ||||  | |||| ||| ||| ||||||||| |||||||||||| |||||||| |||| |||||||||||||    
T  5746273 aacgtttggttaacagaaagactaaattaaaaacgtttacaaacttaaatgacttatgtatgaccaaaataatttaaaagattaatttgttacaaacctc 5746372  T
Q  123 aa 124  Q
    ||    
T  5746373 aa 5746374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 179
Target Start/End: Original strand, 37642976 - 37643117
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    ||||||||| ||||||   | |||| ||| ||||||||||| |||||||||||||| ||||| |   |||| ||||||||| ||||  ||||||||||||    
T  37642976 aaggactaattcgaaaccgtttacaaacttaaaggacttatttgtgaccaaaataatttaaagggtcaatccgttacaaacatcaatgttaaaggactta 37643075  T
Q  139 t-attgaccaaaataacttaaaggaccaatctattacaaacc 179  Q
    | | ||| |||||||||||||| ||||||| ||||| |||||    
T  37643076 tgagtgatcaaaataacttaaatgaccaatatattataaacc 37643117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 33491667 - 33491567
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    ||||||||||| ||||| || |||| | | ||||||||||| ||||| |||||||||||||| |||||||   |||||||||| ||| ||||||||||||    
T  33491667 aaggactaaattgaaaatttttacaaagttaaaggacttatctgtgatcaaaataacttaaaggactaattgattacaaaccttaaacttaaaggactta 33491568  T
Q  139 t 139  Q
    |    
T  33491567 t 33491567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 10074156 - 10074255
Alignment:
Q  88 aaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    ||||| ||||||| || |||||||||||||||||||||   |||| |||||||  |||||||||||||||||| || |||||| |||||||||| |||||    
T  10074156 aaaattacttaaatgattaatctgttacaaacctcaaacggaaagtacttatacatgaccaaaataacttaaatgaacaatctgttacaaacctcaaact 10074255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 14604283 - 14604369
Alignment:
Q  74 acttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaa 159  Q
    ||||||||||||||||||||||||||| ||| ||||| |||||||| | |||||||||| | |||  | ||||||||||||||||||    
T  14604283 acttatgtgtgaccaaaataacttaaaggaccaatctattacaaactttaaatttaaagaatttaggtgtgaccaaaataacttaaa 14604369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 35813570 - 35813632
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||||||||||| ||| |||||    
T  35813570 aaaggacttatgtgtaaccaaaataacttaaataactaatctgttacaaaccttaaacttaaa 35813632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 157
Target Start/End: Complemental strand, 10827219 - 10827143
Alignment:
Q  81 tgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataactta 157  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||| ||||| ||||||| | ||||||||||||||||    
T  10827219 tgtgaccaaaataacttaaa-gaccaatctgttacaaaactcaaacttaaaagacttatgtgtgaccaaaataactta 10827143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 1649343 - 1649433
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaa 159  Q
    |||||||||||| |||| |||||||||||||  ||  |||||||||||||||||||| ||||| ||||||| | ||||||||||| ||||||    
T  1649343 aaaggacttatgagtgatcaaaataacttaatggatcaatctgttacaaacctcaaacttaaa-gacttatgtctgaccaaaatagcttaaa 1649433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 1996207 - 1996141
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||| |||| ||||||||||||||||||||| |  ||||||||||||| |||||| |||||||||    
T  1996207 aaaggatttatatgtgaccaaaataacttaaaatatcaatctgttacaaatctcaaacttaaaggac 1996141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 7209920 - 7209830
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    |||| ||||||||||||| | |||||||||||||||||| |||  || |||||||||||| ||||  |||||||||| | |||||||||||    
T  7209920 caaacttaaaggacttatgtgtgaccaaaataacttaaatgacgtatttattacaaacctcaaacataaaggatccccgatgtaatttagc 7209830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 14604292 - 14604334
Alignment:
Q  142 tgaccaaaataacttaaaggaccaatctattacaaaccttaaa 184  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  14604292 tgaccaaaataacttaaaggaccaatctattacaaactttaaa 14604334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 40980776 - 40980710
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||| |||||||||||| |||||||||||||| ||  ||||| |||||||||||||| |||||||||    
T  40980776 aaagtacttatgtgtgatcaaaataacttaaatgatcaatctattacaaacctcaaacttaaaggac 40980710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 194
Target Start/End: Complemental strand, 1996274 - 1996201
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggat 194  Q
    |||| ||| ||||||||| | |||||||||||||||||||||| |||||||||||||||  ||||| |||||||    
T  1996274 caaacttataggacttatgtgtgaccaaaataacttaaaggactaatctattacaaaccccaaacttaaaggat 1996201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 23796421 - 23796356
Alignment:
Q  144 accaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    |||||||||||||||||||||||| |||||||||||| ||||| |||||   || |||||||||||    
T  23796421 accaaaataacttaaaggaccaatttattacaaacctcaaacttaaagggctccaggtgtaattta 23796356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 191
Target Start/End: Complemental strand, 37642961 - 37642796
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||| | || ||||||||||||||  | |||| ||| |||||| |||| || ||||||||||||||||| ||  ||  |||||||||| | |||     
T  37642961 tttggttaatagaatgactaaatcgaaaacgtttacaaacttaaaggatttatttgagaccaaaataacttaaatgagcaacatgttacaaacttaaaac 37642862  T
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaag 191  Q
    ||||| ||||||| | |   ||||||||| |||||||||||| || ||||||| | ||||| ||||    
T  37642861 ttaaacgacttatgtgttgtcaaaataacctaaaggaccaatatactacaaacataaaacttaaag 37642796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 193
Target Start/End: Complemental strand, 38680734 - 38680630
Alignment:
Q  85 accaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaa 183  Q
    |||||||||||||||| ||     |||||||||||| |||| ||||| || |||| | ||||||||||||||||||||  ||||||||||||||| | ||    
T  38680734 accaaaataacttaaatga-----ctgttacaaaccgcaaaattaaaagatttatgtgtgaccaaaataacttaaagggtcaatctattacaaacttcaa 38680640  T
Q  184 actgaaagga 193  Q
    ||| ||||||    
T  38680639 acttaaagga 38680630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 193
Target Start/End: Complemental strand, 40980808 - 40980711
Alignment:
Q  97 taaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    |||||||| ||| | |||||||  ||||| |||||| |||||| | ||| |||||||||||||| || ||||||||||||||||| ||||| ||||||    
T  40980808 taaaagaccaatttattacaaatttcaaacttaaagtacttatgtgtgatcaaaataacttaaatgatcaatctattacaaacctcaaacttaaagga 40980711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 25456554 - 25456609
Alignment:
Q  76 ttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaag 132  Q
    ||||||||||| |||||||||| |||||| |||||||||||||||||||| ||||||    
T  25456554 ttatgtgtgactaaaataactt-aaagaccaatctgttacaaacctcaaacttaaag 25456609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 33491644 - 33491572
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    |||| ||||||||||||| | ||| |||||||||||||||||| |||  ||||||||||||||||| ||||||    
T  33491644 caaagttaaaggacttatctgtgatcaaaataacttaaaggactaattgattacaaaccttaaacttaaagga 33491572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 130
Target Start/End: Original strand, 38682790 - 38682878
Alignment:
Q  42 gactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaa 130  Q
    ||||||||||||||  | |||| ||| ||| ||||||||||| ||||||||||||| || ||  ||||| |||||||||||||| ||||    
T  38682790 gactaaatcgaaaatgtttacaaacttaaaagacttatgtgtaaccaaaataactttaaggatcaatctattacaaacctcaaacttaa 38682878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 23796432 - 23796373
Alignment:
Q  74 acttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaagg 133  Q
    |||||||||| |||||||||||||||| ||| ||| | |||||||||||||| |||||||    
T  23796432 acttatgtgtaaccaaaataacttaaaggaccaatttattacaaacctcaaacttaaagg 23796373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 136
Target Start/End: Original strand, 35812192 - 35812255
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggact 136  Q
    |||||||| ||||||||||||| ||||| ||| ||||| |||||||| | ||||||||||||||    
T  35812192 gacttatgcgtgaccaaaataatttaaaggaccaatctattacaaactttaaatttaaaggact 35812255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 25456340 - 25456275
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    ||||||||||||||||| |||||||||||||  ||| ||| |||||||||||| ||| |||||||||    
T  25456340 aaaggacttatgtgtgatcaaaataacttaag-gaccaatatgttacaaacctaaaacttaaaggac 25456275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 28559296 - 28559234
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||||| || || ||||||||||||| ||| |||||||||||||| ||||| |||||||||    
T  28559296 gacttatgcgtaacaaaaataacttaaaggaccaatctgttacaaacgtcaaacttaaaggac 28559234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 28559508 - 28559574
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    ||||||||| |||||||||||||||   |||| ||||||| |||||||||| ||||| |||||||||    
T  28559508 aaaggacttgtgtgtgaccaaaatactataaaggactaatttgttacaaacatcaaacttaaaggac 28559574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 37032971 - 37033030
Alignment:
Q  70 aaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    |||||||||||||||||||||||||||||||  |||||||||| | ||| |||||| |||||    
T  37032971 aaggacttatgtgtgaccaaaataacttaaa--actaatctgtcataaatctcaaacttaaa 37033030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 14604349 - 14604394
Alignment:
Q  80 gtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||||||||||||||||| ||||||||||| || ||||||    
T  14604349 gtgtgaccaaaataacttaaaagattaatctgttacgaatctcaaa 14604394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 37032913 - 37033001
Alignment:
Q  71 aggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaa 159  Q
    ||||||||| ||||||| ||||||||||||| || ||| ||||| |||  ||||| || |||||||||| | ||||||||||||||||||    
T  37032913 aggacttatttgtgacccaaataacttaaaa-accaatatgttataaatatcaaacttgaaggacttatgtgtgaccaaaataacttaaa 37033001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 195
Target Start/End: Original strand, 1649406 - 1649526
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctat 171  Q
    ||||||||| ||||||||||| ||||||| || ||| ||||| |||||||||  || || ||||| | | ||| ||||||||||||||  | |||| | |    
T  1649406 gacttatgtctgaccaaaatagcttaaaa-accaatatgttataaacctcaagctttaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgt 1649502  T
Q  172 tacaaaccttaaactgaaaggatc 195  Q
    ||||||||||||||| ||||||||    
T  1649503 tacaaaccttaaacttaaaggatc 1649526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 6588091 - 6588148
Alignment:
Q  76 ttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    ||||||| ||||||||||||||||||    ||| ||||||||||||||||||||||||||    
T  6588091 ttatgtgcgaccaaaataacttaaaatc--aatatgttacaaacctcaaatttaaaggac 6588148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 156
Target Start/End: Original strand, 28022136 - 28022248
Alignment:
Q  45 taaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tg 143  Q
    |||||||||||  | |||| | | ||||| |||||| ||||||||||||||||||| ||  ||| | ||| |||||||||| |||||| |||||| | ||    
T  28022136 taaatcgaaaatgtttacaaatttaaagggcttatgcgtgaccaaaataacttaaatgatcaatttattataaacctcaaacttaaagaacttatgtgtg 28022235  T
Q  144 accaaaataactt 156  Q
    ||||| |||||||    
T  28022236 accaagataactt 28022248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 1996379 - 1996430
Alignment:
Q  142 tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    |||||||||||| |||||||| |||||| |||||||||| ||||| ||||||    
T  1996379 tgaccaaaataatttaaaggaacaatctcttacaaacctcaaacttaaagga 1996430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 38680688 - 38680629
Alignment:
Q  76 ttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    ||||||||||||||||||||||||| |   ||||| |||||||| ||||| |||||||||    
T  38680688 ttatgtgtgaccaaaataacttaaagggtcaatctattacaaacttcaaacttaaaggac 38680629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 1996425 - 1996487
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    ||||||||||| || |||||||||| | |||| ||| ||||| |||||||||||||| |||||    
T  1996425 aaaggacttatctgagaccaaaatatcataaatgaccaatctattacaaacctcaaacttaaa 1996487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 125
Target Start/End: Original strand, 10074211 - 10074253
Alignment:
Q  83 tgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||||||||||| ||  ||||||||||||||||||||    
T  10074211 tgaccaaaataacttaaatgaacaatctgttacaaacctcaaa 10074253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 13170065 - 13170005
Alignment:
Q  122 caaatttaaaggacttatattgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    ||||||||||||| ||||   ||||||||||||||||| ||||||| |||||||||||| |||||    
T  13170065 caaatttaaaggatttat---gaccaaaataacttaaa-gaccaatttattacaaacctcaaact 13170005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 38682833 - 38682875
Alignment:
Q  144 accaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||    
T  38682833 accaaaataactttaaggatcaatctattacaaacctcaaact 38682875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 1649341 - 1649406
Alignment:
Q  127 ttaaaggacttat-attgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaag 191  Q
    ||||||||||||| | ||| ||||||||||||| ||| |||||| |||||||||| ||||| ||||    
T  1649341 ttaaaggacttatgagtgatcaaaataacttaatggatcaatctgttacaaacctcaaacttaaag 1649406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 131
Target Start/End: Complemental strand, 20181496 - 20181404
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    |||||| |||| |||||  | |||| ||| ||| ||||||| | ||||||||||||| |||| ||  ||||| |||||| |||||||||||||    
T  20181496 aaggacaaaattgaaaacatttacaaacttaaatgacttatatttgaccaaaataacataaatgatcaatctattacaaccctcaaatttaaa 20181404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 9e-51; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 26 - 218
Target Start/End: Original strand, 21598615 - 21598808
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||||||||||||||||| |||||  | |||| ||| |||||||||||||||||||||||||||||||| ||| ||| ||||||||||| ||||    
T  21598615 gtttggttaacataaggactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatatgttacaaaccacaaa 21598714  T
Q  126 tttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagcttaaaaa 218  Q
     ||||||||||||| |  || |||||||||||||||||||||||| |||||||||| ||||| |||||| ||||| ||||||||| | ||||||    
T  21598715 cttaaaggacttatgtgagaacaaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggacccctgatgtaatttaccctaaaaa 21598808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 27 - 221
Target Start/End: Complemental strand, 17137011 - 17136816
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||||| ||||||||||| |||||  | |||| ||| ||| ||||||||||||||||||||||||||||  | |||||||||||||||||||||     
T  17137011 tttggttaacaaaaggactaaattgaaaacgtttacaaacttaaaagacttatgtgtgaccaaaataacttaaagaattaatctgttacaaacctcaaac 17136912  T
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagcttaaaaaata 221  Q
    ||||| ||||||| |  ||||||||||||||||||||| |||||||||||||||| ||| | |||||| | ||||||||||||||| ||| |||||    
T  17136911 ttaaatgacttatgtgagaccaaaataacttaaaggactaatctattacaaacctcaaatttaaaggacctctggtgtaatttagcctaataaata 17136816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 27 - 211
Target Start/End: Original strand, 10356432 - 10356617
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||||||||||| ||||| |||||||| |||| ||| |||||||||||||||| | ||||||||||||||||| ||||||||||||| ||||||     
T  10356432 tttggttaacataaggattaaattgaaaagttttacaaacttaaaggacttatgtgtggcaaaaataacttaaaagaccaatctgttacaaatctcaaac 10356531  T
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    ||||||||||||| | | ||||||||||| |||||||||||||| |||||||| | ||||| |||||| | | | |||||||||||    
T  10356532 ttaaaggacttatgtgttaccaaaataacctaaaggaccaatctgttacaaacgtcaaacttaaaggacctcagatgtaatttagc 10356617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 39 - 211
Target Start/End: Complemental strand, 21598600 - 21598427
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    |||||||||||||||||  | || | ||| |||||||||||||| || |||||||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  21598600 aaggactaaatcgaaaacgtttataaacttaaaggacttatgtgggatcaaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggactta 21598501  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctg-gtgtaatttagc 211  Q
    | |   |||||||||||||||||||||||||| ||| |||||| ||||| |||||| ||||| ||||||||||||    
T  21598500 tgtgcaaccaaaataacttaaaggaccaatctgttataaacctcaaacttaaagga-ccctgagtgtaatttagc 21598427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 207
Target Start/End: Complemental strand, 35225553 - 35225384
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    |||| ||||||||||||  | |||| ||| |||| |||||||||||| || ||||||||||| ||| |||||||||||||||| ||| |||||||| |||    
T  35225553 aaggcctaaatcgaaaacgtttacaaacttaaagaacttatgtgtgatcagaataacttaaaggaccaatctgttacaaaccttaaacttaaaggattta 35225454  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatt 207  Q
    | | |||||||||||||||||||||||||| | |||||||||| ||||| |||||| |||| ||||||||    
T  35225453 tgtatgaccaaaataacttaaaggaccaatttgttacaaacctcaaacttaaaggacccctagtgtaatt 35225384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 211
Target Start/End: Original strand, 9982841 - 9983025
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||||| ||||||||||| |||||||| |||| ||| |||||||||||||| ||| |||| |||||||| ||| ||| ||||||||||   |||     
T  9982841 tttggttaacagaaggactaaattgaaaagtt-tacaaacttaaaggacttatgtgagacaaaaagaacttaaaggaccaatatgttacaaactctaaac 9982939  T
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    ||||||||||||| | ||||||||||||||||||||| |||| | |||||| ||| ||||| |||||| || |  |||||||||||    
T  9982940 ttaaaggacttatgtgtgaccaaaataacttaaaggatcaatttgttacaatcctcaaacttaaaggacccttaatgtaatttagc 9983025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 69 - 209
Target Start/End: Complemental strand, 10356386 - 10356245
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaat 167  Q
    |||||||||| |||||||||||||||||||||  || |||||||||||||  ||||| ||||||||||||| | |||||||||||| ||||||||| |||    
T  10356386 aaaggacttaagtgtgaccaaaataacttaaagaaccaatctgttacaaatatcaaacttaaaggacttatgtgtgaccaaaataatttaaaggactaat 10356287  T
Q  168 ctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
     | |||||||||| ||||| |||||| |||| ||||||||||    
T  10356286 ttgttacaaacctcaaacttaaaggacccctagtgtaattta 10356245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 191
Target Start/End: Original strand, 17342626 - 17342776
Alignment:
Q  42 gactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat 141  Q
    |||||||| |||||  | |||| ||| ||||||||||||||||||| |||||||||||| ||| ||  |||||||||||||||| ||||| ||||||| |    
T  17342626 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccgaaataacttaaaggaccaacatgttacaaacctcaaacttaaaagacttatgt 17342725  T
Q  142 -tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaag 191  Q
     | |||||||||||||||||||||||  | |||||||||| ||||| ||||    
T  17342726 attaccaaaataacttaaaggaccaacatgttacaaacctcaaacttaaag 17342776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 80 - 213
Target Start/End: Original strand, 35050804 - 35050938
Alignment:
Q  80 gtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaac 178  Q
    |||| ||| |||||||||||| ||| |||||||||||||| | ||| |||||||||||||   ||||| ||||||||||||||| |||| ||||||||||    
T  35050804 gtgttacctaaataacttaaaggaccaatctgttacaaactttaaacttaaaggacttatgcgtgacctaaataacttaaaggatcaatttattacaaac 35050903  T
Q  179 cttaaactgaaaggatccctggtgtaatttagctt 213  Q
    || ||||| ||||| |||| | |||||||||||||    
T  35050904 ctcaaacttaaaggttcccggatgtaatttagctt 35050938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 209
Target Start/End: Complemental strand, 364156 - 363971
Alignment:
Q  23 aacgtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctc 122  Q
    ||||||||||||| | || || ||| | |||||  | |||| ||| |||| |||||| ||||||||||| |||||||||  | ||||||||||||||||     
T  364156 aacgtttggttaatagaatgattaagttgaaaatgtttacaaacttaaagaacttatttgtgaccaaaacaacttaaaaatc-aatctgttacaaacctt 364058  T
Q  123 aaatttaaaggacttatattga-ccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    ||| ||||||||||| | || | ||||||||| |||||| | || |||||||||||| | ||||| ||||||||||||||||||||||    
T  364057 aaacttaaaggacttctgtttaaccaaaataatttaaagaatca-tctattacaaacttaaaacttaaaggatccctggtgtaattta 363971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 27 - 208
Target Start/End: Complemental strand, 24059832 - 24059653
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||| | |||||||| ||  ||||  | |||| ||| |||||||||||||||||||||||||| ||||| ||  ||||||||| ||||||||||     
T  24059832 tttggttaatagaaggactagattaaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataatttaaatgatcaatctgttataaacctcaaac 24059733  T
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattt 208  Q
    ||||||||||||| |  | ||||| |||||||||  | |||| | |||||||||| ||||| |||||| ||||||||||||||    
T  24059732 ttaaaggacttatgtggggccaaagtaacttaaa--atcaatatgttacaaacctcaaacttaaagga-ccctggtgtaattt 24059653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 186
Target Start/End: Complemental strand, 9982825 - 9982677
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    ||||||||||| |||||  | |||| ||| ||| |||||||||| ||||||||||||| ||| ||  ||||||||||||| |||||| ||||||||||||    
T  9982825 aaggactaaattgaaaacgtttacaaacttaaaagacttatgtgcgaccaaaataactcaaaggatcaatctgttacaaaactcaaacttaaaggactta 9982726  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    | | ||| |||||||| ||||||||  ||| | |||||||||| |||||    
T  9982725 tgtgtgatcaaaataatttaaaggatgaatatgttacaaacctcaaact 9982677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 209
Target Start/End: Complemental strand, 13273185 - 13273052
Alignment:
Q  74 acttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctatt 172  Q
    ||||||||| ||||||||||||| |||  |   |||||||| |||||||||| |||||| |||||| | |||||||||||| | ||| ||||||||||||    
T  13273185 acttatgtgggaccaaaataactaaaatca---atctgttataaacctcaaacttaaagaacttatgtatgaccaaaataattcaaaagaccaatctatt 13273089  T
Q  173 acaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    |||||| | ||||| |||||| | |||||||||||||    
T  13273088 acaaacatcaaacttaaaggacctctggtgtaattta 13273052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 35050704 - 35050802
Alignment:
Q  95 cttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagg 192  Q
    |||||| ||| ||||||||||||| |||||| |||||| |||||| | ||| | |||||||||||||||||||||| |||||||||||||||| |||||    
T  35050704 cttaaaggaccaatctgttacaaatctcaaacttaaagaacttatgtgtgatcgaaataacttaaaggaccaatctgttacaaaccttaaacttaaagg 35050802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 35050738 - 35050858
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatattgaccaaaataacttaaaggaccaatc 168  Q
    |||| |||||||||||| | |||||||||||| ||| |||||||||||||||| ||| |||||||  |     | ||| |||||||||||||||||||||    
T  35050738 aaagaacttatgtgtgatcgaaataacttaaaggaccaatctgttacaaaccttaaacttaaaggcgt----gttacctaaataacttaaaggaccaatc 35050833  T
Q  169 tattacaaaccttaaactgaaagga 193  Q
    | |||||||| ||||||| ||||||    
T  35050834 tgttacaaactttaaacttaaagga 35050858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 185
Target Start/End: Original strand, 17137030 - 17137143
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttat-attgaccaaaataacttaaaggaccaatctat 171  Q
    |||| ||||||||| | ||||||||||| ||| ||||| |||||||| ||| | |||||| |||||| | |||||||||||| ||||| ||||||||||     
T  17137030 gactaatgtgtgactagaataacttaaatgaccaatctattacaaacttcacacttaaagaacttatgagtgaccaaaataatttaaatgaccaatctaa 17137129  T
Q  172 tacaaaccttaaac 185  Q
    |||||||| |||||    
T  17137130 tacaaaccgtaaac 17137143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 2761574 - 2761680
Alignment:
Q  29 tggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaattt 128  Q
    ||||||||| ||||||||||| |||||  | |||| ||| |||||| |||||||||| ||||||||| |||||||| ||| | ||| |||  ||||||||    
T  2761574 tggttaacagaaggactaaattgaaaacgtttacaaacttaaaggatttatgtgtgatcaaaataacctaaaagaccaatttattataaatttcaaattt 2761673  T
Q  129 aaaggac 135  Q
    |||||||    
T  2761674 aaaggac 2761680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 364175 - 364274
Alignment:
Q  36 cataaggactaaatcgaaaag--ttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaagg 133  Q
    ||||||||||||||||||||   || |||| ||| ||| ||||||||||||||||||||||||| |||||  ||||| |||||||  |||||||||||||    
T  364175 cataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataactt-aaagatcaatctattacaaatatcaaatttaaagg 364273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 211
Target Start/End: Original strand, 13273236 - 13273420
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    |||||||| |||||  ||||||| |||||  |  ||| ||| |||| ||||||||||||| ||||||||||||| ||| ||||||||||||| || |||     
T  13273236 tttggttagcataaaaactaaattgaaaaagttcacaaacttaaagaacttatgtgtgacaaaaataacttaaatgaccaatctgttacaaa-ctaaaac 13273334  T
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    |||||||| |||| | |||| ||||||| | ||||||| | ||| |||||| ||| ||||| ||| || | | |||| ||||||||    
T  13273335 ttaaaggatttatgtgtgacaaaaataattaaaaggactattctgttacaatcctcaaacttaaaagacctccggtgaaatttagc 13273420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 19557872 - 19557961
Alignment:
Q  90 aataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaac 178  Q
    ||||||||||| |||  |||||||| |||||||||| ||||| ||||||| | |||||||||||  ||||||||||||||| ||||||||    
T  19557872 aataacttaaaggaccgatctgttataaacctcaaacttaaaagacttatgtgtgaccaaaatattttaaaggaccaatctgttacaaac 19557961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 35050691 - 35050596
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaagga 134  Q
    |||||||||||||||||  | || | ||| ||| || ||||||||||| ||||||||||||| ||||||||| |||| ||| ||||| ||||||||    
T  35050691 aaggactaaatcgaaaacgtttataaacttaaaagatttatgtgtgacaaaaataacttaaaggactaatctcttacgaacttcaaacttaaagga 35050596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 193
Target Start/End: Original strand, 3895705 - 3895821
Alignment:
Q  76 ttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattac 174  Q
    ||||||||||  ||||||||||||| ||||||| |||||||||  | | ||||||| ||||||| | |||||  |||||||||||  |  ||||||||||    
T  3895705 ttatgtgtgattaaaataacttaaatgactaatttgttacaaattttatatttaaaagacttatgtgtgacc--aataacttaaaaaattaatctattac 3895802  T
Q  175 aaaccttaaactgaaagga 193  Q
    |||||| ||||| ||||||    
T  3895803 aaacctcaaacttaaagga 3895821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 3895762 - 3895822
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||||||||||||||  |||||||||| | |||||| |||||||||||||| |||||||||    
T  3895762 gacttatgtgtgaccaa--taacttaaaaaattaatctattacaaacctcaaacttaaaggac 3895822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 2761556 - 2761494
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaa 101  Q
    ||||||||||| |||||  | |||| ||| ||||||||||||||||| |||||||||||||||    
T  2761556 aaggactaaattgaaaacgtttacaaacttaaaggacttatgtgtgatcaaaataacttaaaa 2761494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 9982735 - 9982673
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    ||||||||||||||||| |||||||| ||||| ||  ||| |||||||||||||||| |||||    
T  9982735 aaaggacttatgtgtgatcaaaataatttaaaggatgaatatgttacaaacctcaaacttaaa 9982673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 13273133 - 13273067
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||| |||||||| |||||||||||| | ||||||| ||||| |||||||| ||||| |||||||||    
T  13273133 aaagaacttatgtatgaccaaaataattcaaaagaccaatctattacaaacatcaaacttaaaggac 13273067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 17342607 - 17342534
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaa 100  Q
    ||||||||||  ||||||||||| |||||    |||| ||| ||||||||||||||||||| ||||||||||||    
T  17342607 tttggttaacggaaggactaaattgaaaacacttacaaacttaaaggacttatgtgtgaccgaaataacttaaa 17342534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 177
Target Start/End: Complemental strand, 10356409 - 10356337
Alignment:
Q  106 aatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaa 177  Q
    ||||| |||||||  ||||| ||||||||||||  | ||||||||||||||||||| |||||||| |||||||    
T  10356409 aatctattacaaatatcaaacttaaaggacttaagtgtgaccaaaataacttaaagaaccaatctgttacaaa 10356337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 24059884 - 24059932
Alignment:
Q  78 atgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||||||||||||||||| ||| |||||| ||||||| ||||||    
T  24059884 atgtgtgaccaaaataacttaaaggaccaatctgatacaaacttcaaat 24059932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 35050853 - 35050917
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaagg 133  Q
    |||||||||||| |||||| |||||||||||| ||  ||| | |||||||||||||| |||||||    
T  35050853 aaaggacttatgcgtgacctaaataacttaaaggatcaatttattacaaacctcaaacttaaagg 35050917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 19557915 - 19557961
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaac 119  Q
    |||||||||||||||||||||  ||||| ||| ||||||||||||||    
T  19557915 gacttatgtgtgaccaaaatattttaaaggaccaatctgttacaaac 19557961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 135
Target Start/End: Complemental strand, 3848655 - 3848547
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||||| ||||||||||| ||||   | |||| ||| |||||  |||| ||| | |||| ||||||||| |||  || | ||||||||||||||     
T  3848655 tttggttaacaaaaggactaaattgaaaccgtttacaaacttaaaggtattatatgtaagcaaactaacttaaatgacctattttttacaaacctcaaac 3848556  T
Q  127 ttaaaggac 135  Q
    |||||||||    
T  3848555 ttaaaggac 3848547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 24059889 - 24059925
Alignment:
Q  142 tgaccaaaataacttaaaggaccaatctattacaaac 178  Q
    ||||||||||||||||||||||||||||  |||||||    
T  24059889 tgaccaaaataacttaaaggaccaatctgatacaaac 24059925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 3e-44; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 25895085 - 25895271
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||||| ||||||||||| |||||  | |||| ||| |||||||||||||||||| ||||||||||||| |   |||||||||||||||| |||    
T  25895085 gtttggttaacaaaaggactaaattgaaaacgtttacaaactgaaaggacttatgtgtgactaaaataacttaaaggttcaatctgttacaaaccttaaa 25895184  T
Q  126 tttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
     ||||||||||| | | |||||||||||||||||||||||||||| |||||||||| ||||| ||||||  ||| ||||||||||||    
T  25895185 cttaaaggacttttgtgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggactcctagtgtaatttagc 25895271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 9501060 - 9500889
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    |||||||||||||||||  | |||| ||| |||||||||||||||||| |||||||||||||  |   ||||||||||||||||||| |||| |||||||    
T  9501060 aaggactaaatcgaaaacgtttacaaacttaaaggacttatgtgtgactaaaataacttaaagaagcgatctgttacaaacctcaaacttaagggactta 9500961  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
      | |||||||||||||||||||||||||||| ||||| |||| ||||| |||||| |||||||||||||||    
T  9500960 agtgtgaccaaaataacttaaaggaccaatctgttacagacctaaaacttaaaggacccctggtgtaattta 9500889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 193
Target Start/End: Complemental strand, 44556692 - 44556525
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||| | ||| ||||||| |||||  |||  | ||| ||||||||||||||||| |||||||| ||||| ||  ||| | ||||||||||||||     
T  44556692 tttggttaatagaagaactaaattgaaaacgtatgtaaacttaaaggacttatgtgtgatcaaaataagttaaaggatcaatttattacaaacctcaaac 44556593  T
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    ||||||||||||| | |||| |||| |||||||| |||||||||||||||||||||||||| ||||||    
T  44556592 ttaaaggacttatgtgtgacaaaaaaaacttaaatgaccaatctattacaaaccttaaacttaaagga 44556525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 26 - 179
Target Start/End: Original strand, 3876907 - 3877061
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||| | ||||||||||| | |||| | |||||||  |||||||||||||||||||||||||||||||||||  ||| | ||||||||||||||    
T  3876907 gtttggttaatagaaggactaaattggaaaggtttacatacgtaaaggacttatgtgtgaccaaaataacttaaaagatcaatttattacaaacctcaaa 3877006  T
Q  126 tttaaaggacttat-attgaccaaaataacttaaaggaccaatctattacaaacc 179  Q
    ||||||| ||||||  |||| |||||||| ||||| ||  ||||| |||||||||    
T  3877007 tttaaagaacttatgtttgaacaaaataatttaaatgattaatctgttacaaacc 3877061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 39 - 211
Target Start/End: Complemental strand, 31630220 - 31630049
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    |||||||||||||||||  | |||| ||| ||| |||||||||||||||||||||||||||| ||  |||||||||||||||||||| ||||| ||||||    
T  31630220 aaggactaaatcgaaaacgtttacaaacttaaaagacttatgtgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacttaaa-gactta 31630122  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
      | |||||||||||| ||| |  || |||||||||||||||| ||||| |||||| ||| | |||||||||||    
T  31630121 ggtgtgaccaaaataatttata-aacaaatctattacaaacctcaaacttaaaggaccccagatgtaatttagc 31630049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 211
Target Start/End: Complemental strand, 1316169 - 1316018
Alignment:
Q  60 tacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaa 158  Q
    |||| ||| |||||||||||||| || ||||||||||||||  ||  || ||||||||||||||||  |||||||||||| | |||||||||||||||||    
T  1316169 tacaaacttaaaggacttatgtgcgatcaaaataacttaaagaacatatatgttacaaacctcaaacataaaggacttatgtgtgaccaaaataacttaa 1316070  T
Q  159 aggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    | || | ||||||||||||||| ||| | ||||||| ||||||||||||||||    
T  1316069 acgatctatctattacaaacctcaaatttaaaggat-cctggtgtaatttagc 1316018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 5009331 - 5009160
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagac----taatctgttacaaacct 121  Q
    |||||||||| | ||||||||||| |||||  | |||| ||  ||| ||||||||||||| |||||||||||||| |||    ||||||||||||||||     
T  5009331 gtttggttaagagaaggactaaattgaaaacatttacaaacataaaagacttatgtgtgatcaaaataacttaaatgacaaattaatctgttacaaacca 5009232  T
Q  122 caaatttaaaggacttatat-tgaccaaaataactt-aaaggaccaatctattacaaaccttaaactgaaag 191  Q
    |||| ||||| ||||||| | ||| ||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  5009231 caaacttaaatgacttatgtgtgaacaaaataacttaaaaggaccaatctattacaaacctcaaacttaaag 5009160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 27 - 191
Target Start/End: Original strand, 31630246 - 31630409
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||||| || |||||||| |||||  | |||| ||| |||| |||||||||||||||||||||||||||| || ||||| |||| ||||||||||    
T  31630246 tttggttaacaaaatgactaaattgaaaacatttacaaacttaaag-acttatgtgtgaccaaaataacttaaaa-accaatctattactaacctcaaat 31630343  T
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaag 191  Q
    ||||||||||| | | |||||||||||||||||| || ||||||  || |||||| ||||| ||||    
T  31630344 ttaaaggacttttgtgtgaccaaaataacttaaatgatcaatcttctataaacctcaaacttaaag 31630409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 186
Target Start/End: Complemental strand, 4511543 - 4511396
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    ||||| |||||||||||  | |||| ||| ||| ||||||||||| ||||||||||| |||| ||| ||| |||||||||||||||||||||| |||||     
T  4511543 aaggattaaatcgaaaatgtttacaaacttaaatgacttatgtgtaaccaaaataacataaacgaccaat-tgttacaaacctcaaatttaaatgacttg 4511445  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    | | | ||||| |||||||||| |||||||||||||||||||| |||||    
T  4511444 tgtgtaaccaatataacttaaatgaccaatctattacaaacctcaaact 4511396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 29379905 - 29380028
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaat 167  Q
    |||| ||||||||||||||||||||| ||||| ||||||| |||||||||| ||||| |||||||| |||| |  | ||||||||||||||| |||||||    
T  29379905 aaagaacttatgtgtgaccaaaataatttaaaggactaatatgttacaaacgtcaaacttaaaggaattatgtgaggccaaaataacttaaatgaccaat 29380004  T
Q  168 ctattacaaaccttaaactgaaag 191  Q
     |||||||||||| ||||| ||||    
T  29380005 ttattacaaacctcaaacttaaag 29380028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 209
Target Start/End: Original strand, 33847613 - 33847786
Alignment:
Q  36 cataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||||||||||| |||||  | || | ||| ||||||||||| || ||||||||||| ||||| ||| |||||||||||    |||||||||||||||    
T  33847613 cataaggactaaattgaaaatgtttaaaaacttaaaggacttatatgcgaccaaaataatttaaaggaccaatctgttacactt-tcaaatttaaaggac 33847711  T
Q  136 ttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    |||| | ||||||||||||||||||||| |||| | |||||||| | ||||| |||||| | || ||||||||||    
T  33847712 ttatgtgtgaccaaaataacttaaaggaacaatatgttacaaacatcaaacttaaaggacctctagtgtaattta 33847786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 36694484 - 36694589
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||||| || |||||||| ||||  || |||| ||| |||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||     
T  36694484 tttggttaacagaaagactaaattgaaattttttacaaacttaaaggacttatgtgtgaccaaaataatttaaaggaccaatctgttacaaacctcaaaa 36694583  T
Q  127 ttaaag 132  Q
    ||||||    
T  36694584 ttaaag 36694589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 193
Target Start/End: Complemental strand, 30265546 - 30265380
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    |||| |||||| || |||||||| |||||  | |||| ||| |||| ||||||||||||| |||| |||||||| ||||||||| ||| ||||| |||||    
T  30265546 tttgtttaacagaatgactaaattgaaaacgtttacaaacttaaagcacttatgtgtgacaaaaagaacttaaatgactaatctattagaaaccccaaat 30265447  T
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    | |||| ||| ||   |||||||||||| |||| |||||||| |||||||||||| ||||| ||||||    
T  30265446 t-aaagaactgatgcgtgaccaaaataatttaatggaccaatttattacaaacctcaaacttaaagga 30265380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 36217160 - 36217278
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctat 171  Q
    |||||||||||||||||||||| ||||| ||  |||||||||||||||||||| ||||| ||||||| | ||||||||||||||||||  | |||| | |    
T  36217160 gacttatgtgtgaccaaaataatttaaa-gatcaatctgttacaaacctcaaacttaaaagacttatgtgtgaccaaaataacttaaa--atcaatttgt 36217256  T
Q  172 tacaaaccttaaactgaaagga 193  Q
    ||||||||| ||||| ||||||    
T  36217257 tacaaacctcaaacttaaagga 36217278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 43 - 207
Target Start/End: Original strand, 5009360 - 5009523
Alignment:
Q  43 actaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat- 141  Q
    ||||||| |||||  | |||| ||| |||||| ||||||||||| ||||||||||||| ||  ||| |||||||||||||||| |||||| |||||| |     
T  5009360 actaaattgaaaacgtttacaaacttaaagga-ttatgtgtgacaaaaataacttaaaggatcaatatgttacaaacctcaaacttaaagtacttatgtg 5009458  T
Q  142 tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatt 207  Q
    ||| ||||| |||||||| ||||||| | |||||||||| ||||| |||||| || || |||||||    
T  5009459 tga-caaaaaaacttaaaagaccaatatgttacaaacctcaaacttaaaggacccatgatgtaatt 5009523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 11791765 - 11791873
Alignment:
Q  23 aacgtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctc 122  Q
    ||||||||||||||| || |||||||| |||||  | |||| ||| | |||||||||||||||||||||||||||||| |||  |||| |||||||| ||    
T  11791765 aacgtttggttaacaaaatgactaaattgaaaacgtttacaaacttataggacttatgtgtgaccaaaataacttaaatgacatatctattacaaacttc 11791864  T
Q  123 aaatttaaa 131  Q
    ||| |||||    
T  11791865 aaacttaaa 11791873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 211
Target Start/End: Original strand, 14166371 - 14166542
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    ||||||||||| |||||  | || | ||| |||||  |||||||||| ||| |||||||||||  | ||| |||||| ||||||||| |||||| |||||    
T  14166371 aaggactaaattgaaaacgtttaaaaacttaaagggtttatgtgtgaacaagataacttaaaaatc-aatttgttacgaacctcaaagttaaag-actta 14166468  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    | | |||| |||||||||||||||||| ||||||||||||| | ||||| ||| ||  |||| |||||||||||    
T  14166469 tgtgtgacaaaaataacttaaaggacctatctattacaaacatcaaacttaaatgacacctgatgtaatttagc 14166542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 36217219 - 36217347
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctat 171  Q
    ||||||||||||||||||||||||||||  |  ||| |||||||||||||||| ||||||||||||||| | || ||||||||||    ||||||| |||    
T  36217219 gacttatgtgtgaccaaaataacttaaa--atcaatttgttacaaacctcaaacttaaaggacttatatataacaaaaataactt----gaccaatttat 36217312  T
Q  172 tacaaaccttaaactgaaaggatccctggtgtaattt 208  Q
    |||||| || ||||| |||  | ||||||||||||||    
T  36217313 tacaaaactcaaacttaaa--aaccctggtgtaattt 36217347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 25895060 - 25894964
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||||||||| ||||  | |||| ||| ||||||||||| || ||||||||||||||||| ||| ||| ||||||||| |||||| |||||||||    
T  25895060 aaggactaaatcaaaaatgtttacaaacttaaaggacttatatgcgaccaaaataacttaaaggaccaatttgttacaaatctcaaacttaaaggac 25894964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 210
Target Start/End: Complemental strand, 25895037 - 25894948
Alignment:
Q  122 caaatttaaaggacttatatt-gaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttag 210  Q
    |||| |||||||||||||||  ||||||||||||||||||||||||| | ||||||| || ||||| |||||| ||| ||| ||||||||    
T  25895037 caaacttaaaggacttatatgcgaccaaaataacttaaaggaccaatttgttacaaatctcaaacttaaaggacccccggtataatttag 25894948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 43699442 - 43699517
Alignment:
Q  60 tacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||| ||| ||| |||||||||||||||||||||| ||||| ||  ||| |||||||||||||||| |||||||||    
T  43699442 tacaaacttaaaagacttatgtgtgaccaaaataaattaaaggatcaatatgttacaaacctcaaacttaaaggac 43699517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 12612553 - 12612448
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||||| ||| | ||||| |||||  | |||| ||| ||| ||||||||||||| |||||||| ||||||||| ||||| |||||||||| |||    
T  12612553 gtttggttaacagaag-agtaaattgaaaacatttacaaacttaaatgacttatgtgtgatcaaaataatttaaaagaccaatctattacaaaccttaaa 12612455  T
Q  126 tttaaag 132  Q
     ||||||    
T  12612454 cttaaag 12612448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 44556590 - 44556524
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||||||||||||||| |||| |||||||| ||| ||||| |||||||||| ||| |||||||||    
T  44556590 aaaggacttatgtgtgacaaaaaaaacttaaatgaccaatctattacaaaccttaaacttaaaggac 44556524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 177
Target Start/End: Original strand, 12612619 - 12612724
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctat 171  Q
    ||||||||| ||| |||||||| ||||| || |||| |||||||||||| ||| |||||| |||||  | ||| |||||||| ||||| || ||||||||    
T  12612619 gacttatgtatgagcaaaataatttaaatgattaatatgttacaaacctaaaacttaaagaacttaggtatgatcaaaataatttaaaagatcaatctat 12612718  T
Q  172 tacaaa 177  Q
    ||||||    
T  12612719 tacaaa 12612724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 36694468 - 36694390
Alignment:
Q  39 aaggactaaatcgaaaagttatacatact-aaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaa 118  Q
    ||||||||||| |||||  | |||| ||| |||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  36694468 aaggactaaattgaaaatatttacaaacttaaaaggacttatatgtgaccaaaataacttaaa--actaatctgttacaaa 36694390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 4188979 - 4189087
Alignment:
Q  23 aacgtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctc 122  Q
    ||||||||||||||| || |||||||| |||||  | || | ||| || |||||||| ||||| |||||||||||||| |||  || | |||||||||||    
T  4188979 aacgtttggttaacaaaatgactaaattgaaaacgtttataaacttaatggacttatatgtgatcaaaataacttaaaggacctatatattacaaacctc 4189078  T
Q  123 aaatttaaa 131  Q
    ||| |||||    
T  4189079 aaacttaaa 4189087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 205
Target Start/End: Original strand, 36694519 - 36694602
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaa 205  Q
    |||| ||||||||||||| | |||||||||||| ||||||||||||||| |||||||||| ||| | ||| || |||||||||||    
T  36694519 caaacttaaaggacttatgtgtgaccaaaataatttaaaggaccaatctgttacaaacctcaaaattaaa-gacccctggtgtaa 36694602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 31630346 - 31630417
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttata 140  Q
    ||||||||| |||||||||||||||||||||| ||  |||||  || |||||||||| |||||| |||||||    
T  31630346 aaaggacttttgtgtgaccaaaataacttaaatgatcaatcttctataaacctcaaacttaaagaacttata 31630417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 12612518 - 12612448
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaag 191  Q
    |||| ||||| ||||||| | ||| |||||||| ||||| |||||||||||||||||||||||||| ||||    
T  12612518 caaacttaaatgacttatgtgtgatcaaaataatttaaaagaccaatctattacaaaccttaaacttaaag 12612448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 4188687 - 4188622
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaagga 134  Q
    ||||||||| |||||||||||||||||||||  || | || |||||||||| ||||| ||||||||    
T  4188687 aaaggacttgtgtgtgaccaaaataacttaatggagttatttgttacaaacttcaaagttaaagga 4188622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 4189023 - 4189083
Alignment:
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    |||| |||||||||| ||| ||||||||||||||||||| || |||||||||||| |||||    
T  4189023 ttaatggacttatatgtgatcaaaataacttaaaggacctatatattacaaacctcaaact 4189083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 20245586 - 20245657
Alignment:
Q  68 aaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttat 139  Q
    ||||||||||||  ||||| ||| ||| ||||| || |||| ||||| ||||||||||||||||| ||||||    
T  20245586 aaaaggacttatacgtgactaaagtaatttaaacgattaatatgttataaacctcaaatttaaagaacttat 20245657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 121
Target Start/End: Original strand, 39442453 - 39442496
Alignment:
Q  79 tgtgtgaccaaaataacttaaaa-gactaatctgttacaaacct 121  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  39442453 tgtgtgaccaaaataacttaaaaggattaatctgttacaaacct 39442496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 3876949 - 3877002
Alignment:
Q  128 taaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaacct 180  Q
    |||||||||||| | |||||||||||||||||| || |||| ||||||||||||    
T  3876949 taaaggacttatgtgtgaccaaaataacttaaaagatcaatttattacaaacct 3877002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 39442295 - 39442243
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||||||| ||||||| |||||  ||||||||||||| || ||||||    
T  39442295 gacttatgtgtgacaaaaataatttaaagtactaatctgttacgaatctcaaa 39442243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 43699444 - 43699516
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    |||| ||||| ||||||| | |||||||||||| |||||||| |||| | |||||||||| ||||| ||||||    
T  43699444 caaacttaaaagacttatgtgtgaccaaaataaattaaaggatcaatatgttacaaacctcaaacttaaagga 43699516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 88; Significance: 2e-42; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 161575 - 161742
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||| ||||| || |||||||| ||||| || |||| ||| ||||||||||||||||||||||||||| |||| ||| |||||||||||||  ||||||    
T  161575 tttggctaacagaatgactaaattgaaaacttttacaaacttaaaggacttatgtgtgaccaaaataacctaaaggaccaatctgttacaaatatcaaat 161674  T
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    ||||||||||||| | ||||||||||||||||||||| ||||||||||||||| | ||||| ||||||    
T  161675 ttaaaggacttatgtgtgaccaaaataacttaaaggatcaatctattacaaacatcaaacttaaagga 161742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 211
Target Start/End: Complemental strand, 161559 - 161386
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    |||||||| || ||||  || |||| ||| |||||||||||||||||| ||||||| ||||| ||| ||||||||||||| |||||| ||||||||||||    
T  161559 aaggactacattgaaattttgtacaaacttaaaggacttatgtgtgacaaaaataagttaaaggaccaatctgttacaaatctcaaacttaaaggactta 161460  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    | | |||||||||||| ||||||||||||||| |||||||||| ||||| |||||| |||  || |||||||||    
T  161459 tgtgtgaccaaaataagttaaaggaccaatctgttacaaacctcaaacttaaaggaccccatgtataatttagc 161386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 161677 - 161744
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggact 136  Q
    |||||||||||||||||||||||||||||||| ||  ||||| |||||||| ||||| ||||||||||    
T  161677 aaaggacttatgtgtgaccaaaataacttaaaggatcaatctattacaaacatcaaacttaaaggact 161744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 2e-42; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 27 - 205
Target Start/End: Original strand, 18019992 - 18020171
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||||||||||||||||| |||||| | | || ||| ||| ||||||||||| |||||||||||||||| ||| ||||||||| |||||| |||     
T  18019992 tttggttaacataaggactaaattgaaaaggtttgcaaacttaaaagacttatgtgtaaccaaaataacttaaacgaccaatctgttataaaccttaaac 18020091  T
Q  127 ttaaaggacttat-attgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaa 205  Q
    |||||||||||||  |||||||||||||||||||  | ||||||||||||||||| ||||| |||||| |||| ||||||    
T  18020092 ttaaaggacttatgtttgaccaaaataacttaaataatcaatctattacaaacctcaaacttaaaggacccctagtgtaa 18020171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 39 - 191
Target Start/End: Complemental strand, 252201 - 252048
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    |||||| ||||||||||  | |||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  252201 aaggaccaaatcgaaaacgtttacaaacttaaaggacttatttgtgaccaaaataacttaaaagactgatctgttacaaaccttaaacttaaaggactta 252102  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaag 191  Q
      | |||||||||||||||||| ||||||||||||| |||||| ||||| ||||    
T  252101 cgtgtgaccaaaataacttaaatgaccaatctattataaacctcaaacttaaag 252048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 25848442 - 25848271
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    ||||||||||||| |||  | |||| ||| ||| || || |||||||||||||||||||||  ||||||||| |||||||||||||| |||||||||||     
T  25848442 aaggactaaatcgcaaacgtttacaaacttaaaagatttttgtgtgaccaaaataacttaacggactaatctattacaaacctcaaacttaaaggacttg 25848343  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    | | ||||||||||||||||||||| |||| ||||||||| || ||||| |||||||| |||||||||||||    
T  25848342 tgtgtgaccaaaataacttaaaggatcaatttattacaaatctcaaacttaaaggatctctggtgtaattta 25848271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 209
Target Start/End: Original strand, 47891286 - 47891473
Alignment:
Q  23 aacgtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctc 122  Q
    ||||||||||||||||||||||||||| |||||  | |||| ||| ||| |||||||||||||||||||||||||||| ||| ||| |||| ||||||||    
T  47891286 aacgtttggttaacataaggactaaattgaaaacgtttacaaacttaaaagacttatgtgtgaccaaaataacttaaaggaccaatatgttgcaaacctc 47891385  T
Q  123 aaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    ||| | ||||||||||| | ||| ||||||||||||||||| |||| | |||||||  | ||||| |||||| || || |||||||||    
T  47891386 aaactcaaaggacttatgtgtgatcaaaataacttaaaggatcaatttgttacaaatttcaaacttaaaggacccttgatgtaattta 47891473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 186
Target Start/End: Original strand, 25848467 - 25848628
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||||| ||||||||||| |||||  | |||| ||| ||||||| |||||||||||||||||||||||| ||| ||| |||||||||||| |||    
T  25848467 gtttggttaacagaaggactaaattgaaaacatttacaaacttaaaggacatatgtgtgaccaaaataacttaaaggaccaatgtgttacaaacctaaaa 25848566  T
Q  126 tttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    |||||||||||||| | |||  ||||||||||||| || |||| |||||||||||| |||||    
T  25848567 tttaaaggacttatgtgtgattaaaataacttaaaagatcaatttattacaaacctcaaact 25848628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 212
Target Start/End: Original strand, 26724181 - 26724366
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatac-taaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    ||||||||||| ||||||||||| |||||  | || | || |||||| |||| ||| ||||||||||||||||||  |||||||||||| | ||||||||    
T  26724181 tttggttaacaaaaggactaaattgaaaacgtttataaacttaaaagaacttgtgtatgaccaaaataacttaaa--actaatctgttagagacctcaaa 26724278  T
Q  126 tttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagct 212  Q
    |||||||||||||| | |||| |||||||||||||| | ||||||||||||||||| ||||| |||||| |  |||| ||||||||||    
T  26724279 tttaaaggacttatgtgtgacgaaaataacttaaagaatcaatctattacaaacctcaaacttaaaggacctatggtataatttagct 26724366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 28814008 - 28813845
Alignment:
Q  23 aacgtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctc 122  Q
    ||||||||||||||||||  ||||||| |||||  | |||| |||  ||||||||||||||||||||||||||||||| ||  ||| | ||||||| |||    
T  28814008 aacgtttggttaacataaatactaaattgaaaacgtttacaaacttgaaggacttatgtgtgaccaaaataacttaaatgatcaatttattacaaatctc 28813909  T
Q  123 aaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    ||| |||||| |||||||| ||||| |||||||||||| || ||||||||||||||||| |||||    
T  28813908 aaacttaaagaacttatatgtgacctaaataacttaaa-gatcaatctattacaaacctcaaact 28813845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 36900043 - 36900227
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||||| || |||||||| |||||  | |||| ||| |||||| ||||||| ||  ||||||||||||| ||  ||||| |||||||||| |||    
T  36900043 gtttggttaacagaatgactaaattgaaaatgtttacaaacttaaaggatttatgtgagattaaaataacttaaacgatcaatctcttacaaaccttaaa 36900142  T
Q  126 tttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
     ||||||||| ||| | | |||||||||||||||||||||||||||||| ||| || ||||| |||| |||| || |||||||||    
T  36900143 cttaaaggacctatgtgtaaccaaaataacttaaaggaccaatctattataaatctcaaacttaaagaatccttgatgtaattta 36900227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 45 - 211
Target Start/End: Complemental strand, 46337651 - 46337484
Alignment:
Q  45 taaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tg 143  Q
    ||||||||||| || |||| ||| |||||| |||| ||||||||||||||||||||  | |||| |||||||||| ||||| ||||||||||||| | ||    
T  46337651 taaatcgaaaatttttacaaacttaaaggatttatctgtgaccaaaataacttaaagaattaatatgttacaaacttcaaacttaaaggacttatgtgtg 46337552  T
Q  144 accaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    |||||||||| |||||| | |||| | |||||||||| ||||| ||| || || ||||||||| ||||    
T  46337551 accaaaataatttaaagaatcaatatgttacaaacctcaaacttaaatgacccgtggtgtaatatagc 46337484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 209
Target Start/End: Original strand, 25848570 - 25848712
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataactt-aaaggaccaa 166  Q
    |||||||||||||||||  ||||||||||||||||  ||| | |||||||||||||| || |||||||||| | | ||||||||||||| ||||||||||    
T  25848570 aaaggacttatgtgtgattaaaataacttaaaagatcaatttattacaaacctcaaactttaaggacttatgtgttaccaaaataacttaaaaggaccaa 25848669  T
Q  167 tctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    | ||||| |||||| ||||| |||||| || ||||||||||||    
T  25848670 tttattataaacctcaaacttaaaggacccatggtgtaattta 25848712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 39 - 211
Target Start/End: Complemental strand, 32186617 - 32186445
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    |||||||||||||||||  | || | ||| ||||||||||||||| || ||||||||||||| ||   ||| |||| |||||||||| ||||| ||||||    
T  32186617 aaggactaaatcgaaaacgtttaaaaacttaaaggacttatgtgttacaaaaataacttaaatgatcgatcagttataaacctcaaacttaaaagactta 32186518  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
      | ||||||||||| |||||||||||||| |||||||||||| ||||| |||||| ||||| ||| |||||||    
T  32186517 ggtgtgaccaaaatagcttaaaggaccaatatattacaaacctcaaacttaaagga-ccctgatgttatttagc 32186445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 80 - 207
Target Start/End: Original strand, 28814021 - 28814149
Alignment:
Q  80 gtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaac 178  Q
    ||||||||||| ||||||||| ||| ||||| |||||||||||||| |||||| |||||| | ||| |||||||||||||| ||| ||||||||||||||    
T  28814021 gtgtgaccaaattaacttaaatgaccaatctattacaaacctcaaacttaaagaacttatgtctgatcaaaataacttaaaagactaatctattacaaac 28814120  T
Q  179 cttaaactgaaaggatccctggtgtaatt 207  Q
    || ||| | |||||| ||||| |||||||    
T  28814121 ctcaaatttaaaggacccctgatgtaatt 28814149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 30954956 - 30955075
Alignment:
Q  68 aaaaggacttatgtgtgaccaaaataacttaaaa-gactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggacca 165  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||  |||||||||||| | ||||||||||||||||||  || |    
T  30954956 aaaaggacttatgtgtgaccaaaataacttaaaaggaccaatctcttacaaatctcaaacataaaggacttatgtgtgaccaaaataacttaaa-cacta 30955054  T
Q  166 atctattacaaaccttaaact 186  Q
    ||||||||||||||| |||||    
T  30955055 atctattacaaacctcaaact 30955075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 30970768 - 30970887
Alignment:
Q  68 aaaaggacttatgtgtgaccaaaataacttaaaa-gactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggacca 165  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||  |||||||||||| | ||||||||||||||||||  || |    
T  30970768 aaaaggacttatgtgtgaccaaaataacttaaaaggaccaatctcttacaaatctcaaacataaaggacttatgtgtgaccaaaataacttaaa-cacta 30970866  T
Q  166 atctattacaaaccttaaact 186  Q
    ||||||||||||||| |||||    
T  30970867 atctattacaaacctcaaact 30970887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 36374972 - 36374785
Alignment:
Q  25 cgtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaa 124  Q
    ||||||||||| | || |||||||||||||| || |||| | | |||||| |||| |||||||||||| | ||||| ||||||| |||| ||||||||||    
T  36374972 cgtttggttaataaaatgactaaatcgaaaacttttacaaatttaaaggatttatttgtgaccaaaattatttaaaggactaatttgttgcaaacctcaa 36374873  T
Q  125 atttaaaggacttat-attgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    | |||||||||| ||   |||||||||||| ||||| ||| ||| ||| |||||||| ||||| |||| |||| || | |||||||||    
T  36374872 acttaaaggactaatgcatgaccaaaataatttaaatgactaatttataacaaacctcaaacttaaagaatccatgatataatttagc 36374785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 40286418 - 40286602
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||| | ||| ||||||| |||||  | |||| ||| |||| |||||||||  || ||||||||| ||||||| ||||||||||||||||||||    
T  40286418 gtttggttaatagaagaactaaattgaaaatgtttacaaacttaaagaacttatgtg--actaaaataactcaaaagaccaatctgttacaaacctcaaa 40286515  T
Q  126 tttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
     ||||||||||||| |  ||  |||||||||||||||| ||| |  |||||||||| ||| | |||||| ||||||| |||||||||    
T  40286516 cttaaaggacttatgtgcgataaaaataacttaaaggatcaaacggttacaaacctcaaatttaaaggacccctggtataatttagc 40286602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 209
Target Start/End: Complemental strand, 47069653 - 47069511
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaat 167  Q
    |||||||||||||||||||||||||||| |||  || ||| ||||||||| |||||| |||||| |||||| | ||| ||||||||||||||||||||||    
T  47069653 aaaggacttatgtgtgaccaaaataactaaaagaaccaatttgttacaaaactcaaacttaaagaacttatgtgtgatcaaaataacttaaaggaccaat 47069554  T
Q  168 ctattacaaaccttaaactgaaaggatcc-ctggtgtaattta 209  Q
     | |||||||||| ||| | |||||| ||  ||||||||||||    
T  47069553 atgttacaaacctcaaatttaaaggacccaatggtgtaattta 47069511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 43650136 - 43649991
Alignment:
Q  42 gactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat 141  Q
    ||||||||||||||  | |||| ||| ||| || |||||||||| |||||||||||||| ||| ||||| |||||| ||||||| |||||||| |||| |    
T  43650136 gactaaatcgaaaatgtttacaaacttaaaagatttatgtgtgatcaaaataacttaaatgaccaatctcttacaatcctcaaacttaaaggatttatgt 43650037  T
Q  142 -tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
     |||| ||||||||||||| ||||||| ||||||||| || |||||    
T  43650036 gtgacgaaaataacttaaaagaccaatttattacaaatctcaaact 43649991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 43 - 178
Target Start/End: Complemental strand, 40286389 - 40286253
Alignment:
Q  43 actaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat- 141  Q
    |||||||||||||  | |||| ||| ||||||||| |||||||||||||||||||||| ||  ||| ||||| |||||||||| ||||||||||||| |     
T  40286389 actaaatcgaaaatatttacaaacttaaaggacttctgtgtgaccaaaataacttaaaggaacaatatgttataaacctcaaacttaaaggacttatgtg 40286290  T
Q  142 tgaccaaaataacttaaaggaccaatctattacaaac 178  Q
    ||| ||||||||||| |||||| ||| | ||||||||    
T  40286289 tgatcaaaataacttgaaggactaatttgttacaaac 40286253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 195
Target Start/End: Original strand, 43650164 - 43650335
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacata-ctaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaa 124  Q
    |||| ||||||| ||||||||| | |||||| | |||| | || ||||||||||||||| |||||||||||||||| |||| |||| ||||| | |||||    
T  43650164 gttttgttaacagaaggactaagttgaaaagatttacaaatcttaaaggacttatgtgttaccaaaataacttaaaggactcatctattacatatctcaa 43650263  T
Q  125 atttaaaggacttatatt-gaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatc 195  Q
    | |||||| | |||| ||  |||| |||||||||||||| |||| |||||||||| | ||||| ||||||||    
T  43650264 acttaaagtatttatgttcaaccagaataacttaaaggatcaatttattacaaacttcaaacttaaaggatc 43650335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 27 - 221
Target Start/End: Complemental strand, 47573862 - 47573667
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||| | ||||||||||| ||||  || |||| ||| ||| |||||||| | | ||||||||| ||||| ||  ||| ||||||||||||||||     
T  47573862 tttggttaatagaaggactaaattgaaattttttacaaacttaaatgacttatgagcggccaaaataatttaaaggatcaatatgttacaaacctcaaac 47573763  T
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagcttaaaaaata 221  Q
    ||||| ||||||| | |||  ||||||| ||||||||| ||| | |||||||||| ||||| |||||| || || ||||||||||| || ||||||    
T  47573762 ttaaaagacttatgtgtgataaaaataatttaaaggactaatatgttacaaacctcaaacttaaaggacccatgatgtaatttagcctataaaata 47573667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 137
Target Start/End: Complemental strand, 14964984 - 14964887
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactt 137  Q
    ||||||||||| |||||  | |||| ||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| |||||||||||    
T  14964984 aaggactaaattgaaaacctttacaaacttaaaggacttatgtgtgaccaaaataacttaaatgaccaatctgttacaaa-ctcaaacttaaaggactt 14964887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 152
Target Start/End: Original strand, 32186640 - 32186769
Alignment:
Q  24 acgtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctca 123  Q
    |||||||||||||| || |||||||| |||||  | |||| ||| |||| | |||||||| ||||||||||||||||| |  ||| ||||||||||||||    
T  32186640 acgtttggttaacaaaaagactaaattgaaaacgtttacaaacttaaagaatttatgtgtaaccaaaataacttaaaacatcaatatgttacaaacctca 32186739  T
Q  124 aatttaaaggacttatat-tgaccaaaata 152  Q
    || ||||||||||||| | |||||||||||    
T  32186740 aacttaaaggacttatgtgtgaccaaaata 32186769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 180
Target Start/End: Original strand, 13903016 - 13903128
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaat 167  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||||||||| | |||||||| |||| |   |||||||||||||||||||  |||    
T  13903016 aaaggacttatatgtaaccaaaataacttaaaagactaatatgttacaaacctcagacttaaaggatttatgtgcaaccaaaataacttaaaggattaat 13903115  T
Q  168 ctattacaaacct 180  Q
     | ||||||||||    
T  13903116 atgttacaaacct 13903128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 135
Target Start/End: Original strand, 47069699 - 47069807
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    |||||||||||||| |||||||| |||||  | |||| ||| ||||||||||| |||||| ||| | ||||||| ||| ||||||||||||||||||||     
T  47069699 tttggttaacataatgactaaattgaaaacgtttacaaacttaaaggacttatatgtgacgaaattcacttaaatgaccaatctgttacaaacctcaaac 47069798  T
Q  127 ttaaaggac 135  Q
    |||||||||    
T  47069799 ttaaaggac 47069807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 191
Target Start/End: Complemental strand, 3169797 - 3169715
Alignment:
Q  110 tgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaag 191  Q
    |||||||||||||||| ||||| || |||||| |||| |||||||||||||| ||||||||||||||||||||||||| ||||    
T  3169797 tgttacaaacctcaaacttaaaagatttatatgtgactaaaataacttaaagaaccaatctattacaaaccttaaacttaaag 3169715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 28814070 - 28814136
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||| |||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28814070 aaagaacttatgtctgatcaaaataacttaaaagactaatctattacaaacctcaaatttaaaggac 28814136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 36667283 - 36667361
Alignment:
Q  60 tacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    |||| ||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||||| ||| ||||||||||||    
T  36667283 tacaaacttaaaagacttatgtgtgaccaaaataacttaaaggacaaatctgttacaaaccttaaacttaaaggactta 36667361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 5442576 - 5442491
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataactta 157  Q
    ||||||| |||||||||||||||||||| ||| ||||  |||||||||||||| |||||||| |||||| ||||||||||||||||    
T  5442576 gacttatctgtgaccaaaataacttaaaggacgaatcatttacaaacctcaaacttaaaggagttatatgtgaccaaaataactta 5442491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 138
Target Start/End: Complemental strand, 14624213 - 14624103
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||| | ||||||||||| |||||  | |||| ||| ||| ||||||||||||||||||| |||||||| |  |||||||||| ||||||||||     
T  14624213 tttggttaatagaaggactaaattgaaaatatttacagacttaaatgacttatgtgtgaccaaaa-aacttaaatgtttaatctgttataaacctcaaac 14624115  T
Q  127 ttaaaggactta 138  Q
    ||||||||||||    
T  14624114 ttaaaggactta 14624103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 47891261 - 47891122
Alignment:
Q  42 gactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat 141  Q
    ||||||||||||||  | |||| ||| ||| |||| || || ||||||||||||||||| ||  |||||| ||||||||||||| ||||| ||||||  |    
T  47891261 gactaaatcgaaaacatttacaaacttaaaagactaatatgcgaccaaaataacttaaaggatcaatctggtacaaacctcaaacttaaatgacttaggt 47891162  T
Q  142 -tgaccaaaataacttaaaggaccaatctattacaaacct 180  Q
     |||||||||||| ||||| || |||||| ||||||||||    
T  47891161 gtgaccaaaataatttaaaagatcaatctgttacaaacct 47891122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 76 - 193
Target Start/End: Original strand, 50332652 - 50332770
Alignment:
Q  76 ttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattac 174  Q
    ||||||||| | ||||||||||| | || |||| ||| |||||||||||| ||||||||||||| | | |||||||||||||||| || |||| ||||||    
T  50332652 ttatgtgtggcaaaaataacttagaggattaatttgtaacaaacctcaaacttaaaggacttatgtgtaaccaaaataacttaaaagatcaatttattac 50332751  T
Q  175 aaaccttaaactgaaagga 193  Q
    |||| | ||||| ||||||    
T  50332752 aaacatcaaacttaaagga 50332770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 7607702 - 7607837
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctat 171  Q
    |||||||| |||||||||||||||||||| |  ||| |||||||||| ||||| ||||| |||||||||  ||| |||||||||||||  ||||| ||||    
T  7607702 gacttatgcgtgaccaaaataacttaaaa-atcaatatgttacaaacatcaaacttaaatgacttatataagacgaaaataacttaaaaaaccaa-ctat 7607799  T
Q  172 tacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    || |||| | ||||| |||||| || ||||||||||||    
T  7607800 tataaacttcaaacttaaaggacccttggtgtaattta 7607837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 135
Target Start/End: Complemental strand, 26724162 - 26724069
Alignment:
Q  42 gactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||||| ||||| || || | ||| ||||||||||| |||||||||||||||||||| ||||||||| ||||||| || ||| |||||||||    
T  26724162 gactaaattgaaaacttttataaacttaaaggacttatatgtgaccaaaataacttaaatgactaatcttttacaaatcttaaacttaaaggac 26724069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 39541441 - 39541522
Alignment:
Q  129 aaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    ||||||||||||| ||||||||||||||||||||| |||||  |||||||||| ||||| |||||| ||||| |||||||||    
T  39541441 aaaggacttatatgtgaccaaaataacttaaaggatcaatccgttacaaacctcaaacttaaaggacccctgatgtaattta 39541522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 45131641 - 45131726
Alignment:
Q  93 aacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaa 177  Q
    |||||||| ||||||| ||| |||||||||||| ||||| ||||||||| |||| ||||||||||||||||| ||| |||||||||    
T  45131641 aacttaaaggactaatgtgtgacaaacctcaaacttaaaagacttatatatgacaaaaataacttaaaggactaatatattacaaa 45131726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 218
Target Start/End: Complemental strand, 27768477 - 27768283
Alignment:
Q  23 aacgtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctc 122  Q
    ||||||||||||||| |  ||||||||  ||||  | |||| ||| |||||| |||||||||| ||||||||| |||| || |||||| |||||||| ||    
T  27768477 aacgtttggttaacagattgactaaatttaaaacgtttacaaacttaaaggatttatgtgtgatcaaaataacataaatgattaatcttttacaaacatc 27768378  T
Q  123 aaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagcttaaaaa 218  Q
    | | ||||| || |||| | | | |||||||||||||| || ||| ||||||||||| | ||||| ||| ||| ||||||||| |||||| ||||||    
T  27768377 atacttaaaagatttatgtgtaatcaaaataacttaaatgatcaacctattacaaacttcaaacttaaa-gat-cctggtgtagtttagcctaaaaa 27768283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 39541439 - 39541507
Alignment:
Q  67 taaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    ||||||||||||| |||||||||||||||||||| ||  |||| ||||||||||||||| |||||||||    
T  39541439 taaaaggacttatatgtgaccaaaataacttaaaggatcaatccgttacaaacctcaaacttaaaggac 39541507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 26976499 - 26976574
Alignment:
Q  60 tacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||| ||| ||| |||||||||||||||||||||||||||| |||| || ||||||||| |||||| |||||||||    
T  26976499 tacaaacttaaatgacttatgtgtgaccaaaataacttaaaggacttatatgttacaaagctcaaacttaaaggac 26976574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 36667196 - 36667141
Alignment:
Q  76 ttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||| |||||    
T  36667196 ttatgtgtgaccaaaataacttaagagactaatctcttacaaacctcaaacttaaa 36667141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 178
Target Start/End: Complemental strand, 42866021 - 42865922
Alignment:
Q  78 atgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaa 176  Q
    |||||||||||||||||| |||| || ||||||||||||||  |||||| ||||  |||||||| |||||||||||| |||||  |||||| ||||||||    
T  42866021 atgtgtgaccaaaataacataaatgattaatctgttacaaatatcaaatataaaaaacttatatgtgaccaaaataatttaaa--accaatttattacaa 42865924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 30955018 - 30955078
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaa 130  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||||||||| ||||    
T  30955018 aaaggacttatgtgtgaccaaaataacttaaac-actaatctattacaaacctcaaacttaa 30955078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 30970830 - 30970890
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaa 130  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||||||||| ||||    
T  30970830 aaaggacttatgtgtgaccaaaataacttaaac-actaatctattacaaacctcaaacttaa 30970890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 198
Target Start/End: Complemental strand, 26724137 - 26724065
Alignment:
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccct 198  Q
    ||||||||||||||| |||||||||||||||||| ||| ||||| ||||||| |||||||| |||||| ||||    
T  26724137 ttaaaggacttatatgtgaccaaaataacttaaatgactaatcttttacaaatcttaaacttaaaggacccct 26724065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 36667285 - 36667357
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    |||| ||||| ||||||| | |||||||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  36667285 caaacttaaaagacttatgtgtgaccaaaataacttaaaggacaaatctgttacaaaccttaaacttaaagga 36667357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 13903076 - 13903139
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaag 132  Q
    |||||| |||||||  |||||||||||||||| || |||| |||||||||||||||||||||||    
T  13903076 aaaggatttatgtgcaaccaaaataacttaaaggattaatatgttacaaacctcaaatttaaag 13903139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 139
Target Start/End: Original strand, 47573911 - 47573977
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttat 139  Q
    ||||||| |||||||||||||||||||| ||  ||||| |||||||||||||| ||||| |||||||    
T  47573911 gacttatatgtgaccaaaataacttaaaggatcaatctattacaaacctcaaacttaaaagacttat 47573977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 47573911 - 47573965
Alignment:
Q  133 gacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||    
T  47573911 gacttatatgtgaccaaaataacttaaaggatcaatctattacaaacctcaaact 47573965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 127
Target Start/End: Complemental strand, 47891170 - 47891116
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatt 127  Q
    |||||| ||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  47891170 gacttaggtgtgaccaaaataatttaaaagatcaatctgttacaaacctcaaatt 47891116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 50332705 - 50332771
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    ||||||||||||||| |||||||||||||||||||  ||| | |||||||| ||||| |||||||||    
T  50332705 aaaggacttatgtgtaaccaaaataacttaaaagatcaatttattacaaacatcaaacttaaaggac 50332771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 36667369 - 36667450
Alignment:
Q  106 aatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    |||| ||||||||||||||| |||||| |||||  | || ||||||||||| ||| |||||||||||||||||||| |||||    
T  36667369 aatcagttacaaacctcaaacttaaagaacttaggtgtgtccaaaataactaaaatgaccaatctattacaaacctcaaact 36667450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 159
Target Start/End: Complemental strand, 40209841 - 40209710
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||||| ||  ||||||| |||||  | |||| ||| |||| |||||||||||| ||||| |||||||||||  ||||| ||| |||||||||||    
T  40209841 tttggttaacagaataactaaattgaaaacgtttacaaacttaaag-acttatgtgtgaacaaaacaacttaaaagatcaatctattagaaacctcaaat 40209743  T
Q  127 ttaaaggacttatat-tgaccaaaataacttaaa 159  Q
    |||||  |||||| | ||| ||||||||||||||    
T  40209742 ttaaa-tacttatgtgtgatcaaaataacttaaa 40209710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 252178 - 252106
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    |||| ||||||||||||| | |||||||||||||||||| |||  |||| |||||||||||||||| ||||||    
T  252178 caaacttaaaggacttatttgtgaccaaaataacttaaaagactgatctgttacaaaccttaaacttaaagga 252106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 40286303 - 40286247
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    ||||||||||||||||| ||||||||||| || ||||||| |||||||||| |||||    
T  40286303 aaaggacttatgtgtgatcaaaataacttgaaggactaatttgttacaaacatcaaa 40286247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 209
Target Start/End: Original strand, 14624250 - 14624399
Alignment:
Q  60 tacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaa 158  Q
    |||| ||| ||| |||||||||||||||| ||||||||||||  ||||||| |||||||| | ||| ||||| ||||||| | ||| |||||||| ||||    
T  14624250 tacaaacttaaaagacttatgtgtgaccagaataacttaaaa-tctaatctattacaaacattaaacttaaa-gacttatgtatgatcaaaataatttaa 14624347  T
Q  159 aggaccaatctatt-acaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    || |||||||| || | |||||| ||||| ||| ||| |||  |||||||||    
T  14624348 agaaccaatctgttaaaaaacctcaaacttaaatgattcctaatgtaattta 14624399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 227
Target Start/End: Complemental strand, 26976425 - 26976342
Alignment:
Q  144 accaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagcttaaaaaatactatta 227  Q
    |||||||||||||| |||||| |||| |||||||||| ||||| |||||| | || || ||||||||| | || ||||||||||    
T  26976425 accaaaataacttagaggacctatctgttacaaacctcaaacttaaaggacctctagtataatttagccttaataatactatta 26976342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 45131513 - 45131438
Alignment:
Q  60 tacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||| ||| ||| ||||||| ||| || ||||||||||||| ||  |||||||||||||||||||| |||||||||    
T  45131513 tacaaacttaaaagacttatatgttacaaaaataacttaaatgatcaatctgttacaaacctcaaacttaaaggac 45131438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 193
Target Start/End: Complemental strand, 45131600 - 45131439
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatact-aaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    ||||||||||| || |||||| | |||||  | |||| ||| ||||||||||||||||||| |||||||| |||| ||| ||   |||||||||          
T  45131600 tttggttaacagaatgactaagttgaaaacatttacaaacttaaaaggacttatgtgtgacaaaaataacataaaggaccaactagttacaaac------ 45131507  T
Q  126 tttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
     ||||| ||||||||| | || ||||||||||||| || |||||| |||||||||| ||||| ||||||    
T  45131506 -ttaaaagacttatatgttacaaaaataacttaaatgatcaatctgttacaaacctcaaacttaaagga 45131439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 53763568 - 53763630
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||||||| |||||||| |||||||||   |||||| |||||||||||||| |||||||||    
T  53763568 gacttatgtgcgaccaaaacaacttaaaatgttaatctcttacaaacctcaaacttaaaggac 53763630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 13903009 - 13903082
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggat 194  Q
    |||||||||||||||||||| | |||||||||||||||| ||| ||| | |||||||||| | ||| |||||||    
T  13903009 caaatttaaaggacttatatgtaaccaaaataacttaaaagactaatatgttacaaacctcagacttaaaggat 13903082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 14964961 - 14964904
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaac 178  Q
    |||| ||||||||||||| | |||||||||||||||||| ||||||||| ||||||||    
T  14964961 caaacttaaaggacttatgtgtgaccaaaataacttaaatgaccaatctgttacaaac 14964904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 26976484 - 26976375
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||| | |||| |||||| |||||    |||| ||| ||| || || ||||| |||||||||||||| | |||  |||||||||||||||||||    
T  26976484 gtttggttaatagaaggtctaaattgaaaacgattacaaacttaaaagatttttgtgtaaccaaaataacttagaggacctatctgttacaaacctcaaa 26976385  T
Q  126 tttaaaggac 135  Q
     |||||||||    
T  26976384 cttaaaggac 26976375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 39714630 - 39714694
Alignment:
Q  67 taaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaag 132  Q
    |||||||| |||||||||||||||||||||| ||| |  ||||||||| |||||||||| ||||||    
T  39714630 taaaaggatttatgtgtgaccaaaataactt-aaacatcaatctgttaaaaacctcaaacttaaag 39714694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 209
Target Start/End: Original strand, 40209860 - 40210024
Alignment:
Q  42 gactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat 141  Q
    |||||||| ||||| || | || ||| ||| ||||||||||||||||||||| ||||||  || ||||||||  | |||||||| ||||| || |||| |    
T  40209860 gactaaattgaaaacttttgcaaacttaaacgacttatgtgtgaccaaaatatcttaaa--accaatctgttcgagacctcaaacttaaa-gaattatgt 40209956  T
Q  142 -tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
     |||||||||||| ||||| || |||| | ||| ||| || ||||| ||||||||  ||||||||||||    
T  40209957 gtgaccaaaataaattaaa-gatcaatatgttagaaatctcaaacttaaaggatctttggtgtaattta 40210024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 193
Target Start/End: Complemental strand, 5442583 - 5442515
Alignment:
Q  126 tttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    |||||| ||||||| | |||||||||||||||||||||| ||||  |||||||||| ||||| ||||||    
T  5442583 tttaaaagacttatctgtgaccaaaataacttaaaggacgaatcatttacaaacctcaaacttaaagga 5442515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 25848503 - 25848575
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    |||| ||||||||| ||| | |||||||||||||||||||||||||| | |||||||||| ||| | ||||||    
T  25848503 caaacttaaaggacatatgtgtgaccaaaataacttaaaggaccaatgtgttacaaacctaaaatttaaagga 25848575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 47069734 - 47069806
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    |||| ||||||||||||||| |||| ||| | ||||||| ||||||||| |||||||||| ||||| ||||||    
T  47069734 caaacttaaaggacttatatgtgacgaaattcacttaaatgaccaatctgttacaaacctcaaacttaaagga 47069806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 50332600 - 50332516
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctg 111  Q
    |||||||| |||||| ||||||| |||||  | |||| ||| ||| ||||||| ||||| |||||||||||||| ||| ||||||    
T  50332600 tttggttagcataagcactaaattgaaaacgtttacaaacttaaatgacttatatgtgatcaaaataacttaaaggaccaatctg 50332516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 54343423 - 54343349
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaa 101  Q
    |||||||||||||||||||  ||| |||||  | |||| ||| ||||| ||||| |||||||||||||||||||||    
T  54343423 gtttggttaacataaggaccgaattgaaaacgtttacaaacttaaagg-cttatatgtgaccaaaataacttaaaa 54343349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 26976501 - 26976587
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatt 207  Q
    |||| ||||| ||||||| | ||||||||||||||||||||||  || | ||||||| || ||||| |||||| ||||| |||||||    
T  26976501 caaacttaaatgacttatgtgtgaccaaaataacttaaaggacttatatgttacaaagctcaaacttaaaggacccctgatgtaatt 26976587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 36667392 - 36667454
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    |||| ||||| ||||| ||||||||||| ||| ||| ||||| |||||||||||||| |||||    
T  36667392 aaagaacttaggtgtgtccaaaataactaaaatgaccaatctattacaaacctcaaacttaaa 36667454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 159
Target Start/End: Original strand, 39714545 - 39714663
Alignment:
Q  43 actaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa-tttaaaggacttatat 141  Q
    ||||||| |||||  | |||| ||| ||| ||||||||||| | |||||||| ||||| ||  ||| | |||||||||||||| || |||||| |||| |    
T  39714545 actaaattgaaaacgtttacaaactcaaatgacttatgtgtaatcaaaataatttaaatgatcaatttattacaaacctcaaacttaaaaggatttatgt 39714644  T
Q  142 -tgaccaaaataacttaaa 159  Q
     ||||||||||||||||||    
T  39714645 gtgaccaaaataacttaaa 39714663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 42866061 - 42866159
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    ||||||||| | ||| |||||||  |||| || |||| |||  |||||||||||||||||||||||  |||||| ||| ||| | |||||||| |||||    
T  42866061 tttggttaataaaagtactaaattaaaaacttttacaaacttgaaggacttatgtgtgaccaaaatttcttaaatgaccaatatattacaaacttcaaa 42866159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 40286370 - 40286298
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    |||| ||||||||||| | | ||||||||||||||||||||| |||| | ||| |||||| ||||| ||||||    
T  40286370 caaacttaaaggacttctgtgtgaccaaaataacttaaaggaacaatatgttataaacctcaaacttaaagga 40286298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 43650091 - 43650043
Alignment:
Q  146 caaaataacttaaaggaccaatctattacaaaccttaaactgaaaggat 194  Q
    |||||||||||||| ||||||||| |||||| ||| ||||| |||||||    
T  43650091 caaaataacttaaatgaccaatctcttacaatcctcaaacttaaaggat 43650043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 50332565 - 50332517
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatct 169  Q
    |||| ||||| ||||||||| ||| ||||||||||||||||||||||||    
T  50332565 caaacttaaatgacttatatgtgatcaaaataacttaaaggaccaatct 50332517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 51833373 - 51833481
Alignment:
Q  23 aacgtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctc 122  Q
    ||||||||||||||| ||| ||||||| || ||  | ||||  || ||| ||||||||| |||||||||||||| | | ||  ||||| |||||||| ||    
T  51833373 aacgtttggttaacagaagaactaaattgataacatttacaatcttaaatgacttatgtatgaccaaaataactaacatgatcaatctattacaaacttc 51833472  T
Q  123 aaatttaaa 131  Q
    ||| |||||    
T  51833473 aaacttaaa 51833481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 27 - 209
Target Start/End: Complemental strand, 41151572 - 41151389
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||||| ||||||||||| |||||  | |||| ||  |||||||||||||||||||||||||||||||| ||| |||||||||| || ||||||     
T  41151572 tttggttaacagaaggactaaattgaaaacatttacaaacataaaggacttatgtgtgaccaaaataacttaaaggaccaatctgttactaaactcaaac 41151473  T
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    ||||||||||||| | ||| |||||||||||||||||||||| | ||||||| || ||||| |||||| |  ||||||||||||    
T  41151472 ttaaaggacttatgtgtgatcaaaataacttaaaggaccaatatgttacaaaactcaaacttaaaggacctatggtgtaattta 41151389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 211
Target Start/End: Original strand, 24909574 - 24909759
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||||| ||||||||||| |||   || |||| ||| |||||||||||| ||||||||||||| ||||| ||| |||||| |||||||||||||     
T  24909574 tttggttaacagaaggactaaattgaatttttttacaaacttaaaggacttatgcgtgaccaaaataatttaaaggaccaatctgctacaaacctcaaac 24909673  T
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    ||||||||||||| | ||| |||||||||||||||||||||| | ||||||| || ||||| |||||| |||  ||||| ||||||    
T  24909674 ttaaaggacttatgtgtgatcaaaataacttaaaggaccaatttgttacaaatctcaaacttaaaggaccccgagtgtagtttagc 24909759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 27052533 - 27052408
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaat 167  Q
    ||||||||||||||||||| |||||||||||| ||| ||| |||||||||||| ||| ||||| ||||||||| |||| |||||||||||| ||||||||    
T  27052533 aaaggacttatgtgtgaccgaaataacttaaaggaccaatgtgttacaaaccttaaacttaaatgacttatatgtgactaaaataacttaagggaccaat 27052434  T
Q  168 ctattacaaaccttaaactgaaagga 193  Q
    ||||||||||| | ||||| ||||||    
T  27052433 ctattacaaacatcaaacttaaagga 27052408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 41151609 - 41151737
Alignment:
Q  60 tacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctc-aaatttaaaggacttatat-tgaccaaaataactta 157  Q
    |||| ||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||| | || || ||||||||||| | ||||||||||||||||    
T  41151609 tacaaacttaaaggacttatgtgtgaccaaaagaacttaaaggaccaatctgttacaaaccacgaacttaaaaggacttatgtgtgaccaaaataactta 41151708  T
Q  158 aaggaccaatctattacaaaccttaaact 186  Q
    |||||| ||||| |||||||||| |||||    
T  41151709 aaggactaatctgttacaaacctcaaact 41151737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 39 - 193
Target Start/End: Complemental strand, 24827512 - 24827357
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    |||||||||||||||||  | |||| | | ||| |||||||||||||| ||||||||||||| ||| ||||| |||||||| ||||| ||||||||||||    
T  24827512 aaggactaaatcgaaaacgtttacaaatttaaaagacttatgtgtgactaaaataacttaaatgacaaatctattacaaacatcaaacttaaaggactta 24827413  T
Q  139 -tattgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
     |  ||| ||| |||||||||| ||||||||| |||||||||| ||||| ||||||    
T  24827412 gttgtgatcaatataacttaaatgaccaatctgttacaaacctcaaacttaaagga 24827357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 6220395 - 6220520
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaat 167  Q
    |||||||||||||||||||| |||||||||||  || ||||||||||||| |||||| |||||| |||||| | |||| |||||||||||||| ||||||    
T  6220395 aaaggacttatgtgtgaccacaataacttaaagtaccaatctgttacaaatctcaaacttaaagaacttatgtgtgacaaaaataacttaaagaaccaat 6220494  T
Q  168 ctattacaaaccttaaactgaaagga 193  Q
     | |||||||||| ||||| ||||||    
T  6220495 ttgttacaaacctcaaacttaaagga 6220520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 209
Target Start/End: Original strand, 20209445 - 20209613
Alignment:
Q  42 gactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat 141  Q
    ||||| ||||||||  | |||| ||| |||| |||||| |||||||||||||||||||| ||  ||||||||||||||||||||  |||| ||||||| |    
T  20209445 gactatatcgaaaatgtttacaaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacgtaaaagacttatgt 20209544  T
Q  142 -tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
     |||||||||||| ||||||||| ||| | |||||||||| ||| | ||||||  | ||||||||||||    
T  20209545 gtgaccaaaataatttaaaggactaatatgttacaaacctcaaatttaaaggacacgtggtgtaattta 20209613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 209
Target Start/End: Original strand, 20229153 - 20229321
Alignment:
Q  42 gactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat 141  Q
    ||||| ||||||||  | |||| ||| |||| |||||| |||||||||||||||||||| ||  ||||||||||||||||||||  |||| ||||||| |    
T  20229153 gactatatcgaaaatgtttacaaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacgtaaaagacttatgt 20229252  T
Q  142 -tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
     |||||||||||| ||||||||| ||| | |||||||||| ||| | ||||||  | ||||||||||||    
T  20229253 gtgaccaaaataatttaaaggactaatatgttacaaacctcaaatttaaaggacacgtggtgtaattta 20229321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 27052613 - 27052729
Alignment:
Q  76 ttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattac 174  Q
    |||||||||| |||||||||||||| ||| ||||||||| |||||||||| ||||||||||||| |  ||| |||||||||||||| | |||||||||||    
T  27052613 ttatgtgtgatcaaaataacttaaaggaccaatctgttataaacctcaaacttaaaggacttatgtgcgacaaaaataacttaaagaatcaatctattac 27052712  T
Q  175 aaaccttaaactgaaag 191  Q
    |||||| ||||| ||||    
T  27052713 aaacctcaaacttaaag 27052729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 36053016 - 36053211
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||||| || ||||| || ||||| || |||| ||| |||| ||||||||||||| ||||||||||||| ||  ||| | ||||||||||||||    
T  36053016 gtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgactaaaataacttaaaggatcaatattttacaaacctcaaa 36053115  T
Q  126 tttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagcttaaaaaata 221  Q
    |||||| ||||||||| |||| |||||||||||||  || ||| |||||||||| | ||||| ||||  ||   ||||||| ||||| |||||||||    
T  36053116 tttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagattcttcggtgtaagttagcctaaaaaata 36053211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 193
Target Start/End: Complemental strand, 6220310 - 6220183
Alignment:
Q  67 taaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggacca 165  Q
    ||||| |||||||||||||| ||||| ||||||| ||| |||| ||||||||||||||| ||||||||||||| | | || |||||||||||||||||||    
T  6220310 taaaaagacttatgtgtgacaaaaattacttaaatgaccaatcagttacaaacctcaaacttaaaggacttatctgttacaaaaataacttaaaggacca 6220211  T
Q  166 atctattacaaaccttaaactgaaagga 193  Q
    || | || ||||||| ||||| ||||||    
T  6220210 atttgtttcaaacctcaaacttaaagga 6220183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 195
Target Start/End: Original strand, 9399995 - 9400166
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatact-aaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaa 124  Q
    |||||||||||  || |||||||| |||||| | |||| ||| ||||||||||||||||||||||||||||||||| ||| ||  || ||||||||||||    
T  9399995 gtttggttaacggaatgactaaattgaaaaggtttacaaacttaaaaggacttatgtgtgaccaaaataacttaaaggaccaacatgctacaaacctcaa 9400094  T
Q  125 atttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatc 195  Q
    | | |||| | |||| | |||||||||||||||||| || |||| | |||||||||| ||||| ||| ||||    
T  9400095 actcaaagaatttatgtgtgaccaaaataacttaaacgatcaatatgttacaaacctcaaacttaaaagatc 9400166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 41151677 - 41151741
Alignment:
Q  67 taaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  41151677 taaaaggacttatgtgtgaccaaaataacttaaaggactaatctgttacaaacctcaaacttaaa 41151741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 219
Target Start/End: Complemental strand, 9399935 - 9399790
Alignment:
Q  75 cttatgtgtgaccaaaataacttaaaagactaa-tctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctatt 172  Q
    |||||||||||||||||||||||||| || | | ||| |||||||||| ||| ||||||||||||  | |||||||| |||||||||| |||||| | ||    
T  9399935 cttatgtgtgaccaaaataacttaaa-gagtcactctattacaaaccttaaacttaaaggacttacgtgtgaccaaagtaacttaaagaaccaatatgtt 9399837  T
Q  173 acaaaccttaaactgaaaggatccctggtgtaatttagcttaaaaaa 219  Q
    |||||||| ||||| |||||| |||| ||||||| || |||||||||    
T  9399836 acaaacctcaaacttaaaggacccctagtgtaatgtaccttaaaaaa 9399790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 191
Target Start/End: Complemental strand, 27855712 - 27855559
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    |||||||||||||||||  | || | ||| ||| || |||| ||| ||||||| |||||||  ||| |||||| |||||||||| || ||||| || |||    
T  27855712 aaggactaaatcgaaaacatttaaaaacttaaatgatttatatgtaaccaaaacaacttaagggaccaatctgctacaaacctcgaacttaaatgattta 27855613  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaag 191  Q
    | | ||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  27855612 tgtgtgttcaaaataacttaaaggaccaatctattacaaaccttaaacttaaag 27855559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 39 - 178
Target Start/End: Complemental strand, 27128029 - 27127892
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    ||||||||||| |||||  | |||| ||| ||||||||||||||||||||||||||||||||  |  ||||||||||||| |||||| |||||  |||||    
T  27128029 aaggactaaattgaaaacatttacaaacttaaaggacttatgtgtgaccaaaataacttaaagaatcaatctgttacaaa-ctcaaacttaaa--actta 27127933  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaac 178  Q
    | | ||| ||||||||||||||  |||||||| ||||||||    
T  27127932 tgtgtgatcaaaataacttaaataaccaatctgttacaaac 27127892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 30 - 193
Target Start/End: Original strand, 27128048 - 27128212
Alignment:
Q  30 ggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataactt-aaaagactaatctgttacaaacctcaaattt 128  Q
    |||||||| || |||||||| |||||  | |||| ||| |||  |||||||||||||||||||||||| ||||||  ||| ||||| |||||| ||| ||    
T  27128048 ggttaacagaatgactaaattgaaaacgtttacagactgaaaaaacttatgtgtgaccaaaataacttaaaaagatcaatttgttagaaaccttaaactt 27128147  T
Q  129 aaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    ||||||||| | | ||| ||||||||| ||||  ||||||||||||||||||| ||||| ||||||    
T  27128148 aaaggacttgtgtgtgatcaaaataacctaaa-aaccaatctattacaaacctcaaacttaaagga 27128212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 16913117 - 16912973
Alignment:
Q  78 atgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaa 176  Q
    |||||||| |||||||||||  | ||| |||||||||| ||||||||| |||||| | |||||| ||| |||||||||||||| ||||| | ||||||||    
T  16913117 atgtgtgatcaaaataacttttatgaccaatctgttacgaacctcaaacttaaagaatttatatgtgatcaaaataacttaaaagaccattttattacaa 16913018  T
Q  177 accttaaactgaaaggatccctggtgtaatttagcttaaaaaata 221  Q
    | || ||||  ||||||  || ||||||||||||| || ||||||    
T  16913017 atctcaaacataaaggactcccggtgtaatttagcctataaaata 16912973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 27052556 - 27052475
Alignment:
Q  106 aatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    ||||| ||||||| |||||| ||||||||||||| | ||||| |||||||||||||||||||| | ||||||||||||||||    
T  27052556 aatctattacaaatctcaaacttaaaggacttatgtgtgaccgaaataacttaaaggaccaatgtgttacaaaccttaaact 27052475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 159
Target Start/End: Complemental strand, 14550166 - 14550035
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||||| ||||| ||||| |||||  | |||| ||| ||||||||||||||| |||||   ||||| |||||  ||| ||||||||||||||||    
T  14550166 gtttggttaacagaaggaataaattgaaaacgtttacaaacttaaaggacttatgtgtaaccaa---aacttcaaagatcaatatgttacaaacctcaaa 14550070  T
Q  126 tttaaaggacttatat-tgaccaaaataacttaaa 159  Q
    | ||||| |||||| | |||||||||| |||||||    
T  14550069 tgtaaagaacttatgtgtgaccaaaattacttaaa 14550035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 163
Target Start/End: Original strand, 14550212 - 14550318
Alignment:
Q  60 tacatactaaaaggacttatgtgtgaccaaaa--taacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataactt 156  Q
    |||| ||| ||| |||||||||||||||||||  ||| |||||  |||||||  |||||||||||||| ||||| ||||||| | |||||||||||||||    
T  14550212 tacaaacttaaatgacttatgtgtgaccaaaaaataatttaaagaactaatccattacaaacctcaaacttaaaagacttatgtatgaccaaaataactt 14550311  T
Q  157 aaaggac 163  Q
    |||||||    
T  14550312 aaaggac 14550318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 29427958 - 29428021
Alignment:
Q  60 tacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctca 123  Q
    |||| ||| ||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  29427958 tacaaacttaaaggacttatgtatgaccaaaataacttaaaagaccaatctgttagaaacctca 29428021  T

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Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 24083206 - 24083351
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||||| |||| |||||| |||||  | |||| ||| ||||||    | ||||| |||||||||||||||  | ||||||||||||||||||||     
T  24083206 tttggttaacagaagggctaaattgaaaatgtttacaaacttaaagga----tatgtgatcaaaataacttaaaaatc-aatctgttacaaacctcaaac 24083300  T
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaa 176  Q
    ||||| | ||||| | ||| ||||||||||||||  |||||||||||||||    
T  24083301 ttaaaagccttatgtgtgatcaaaataacttaaataaccaatctattacaa 24083351  T

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Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 15563969 - 15563854
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaat 167  Q
    ||||||||||||| ||||||||||||||| ||  | |||| |||||||| ||||||| ||||| ||||||| | |||| |||||||||||||  |  |||    
T  15563969 aaaggacttatgtatgaccaaaataactttaagtattaatatgttacaaccctcaaacttaaaagacttatgtgtgactaaaataacttaaa-aattaat 15563871  T
Q  168 ctattacaaaccttaaa 184  Q
    || ||||||||||||||    
T  15563870 ctgttacaaaccttaaa 15563854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 6220455 - 6220526
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttata 140  Q
    |||| ||||||||||||| |||||||||||||  || ||| |||||||||||||||| ||||||||| ||||    
T  6220455 aaagaacttatgtgtgacaaaaataacttaaagaaccaatttgttacaaacctcaaacttaaaggacatata 6220526  T

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Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 9399881 - 9399815
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||||||| ||||||||||| |||||||||  || ||| |||||||||||||||| |||||||||    
T  9399881 aaaggacttacgtgtgaccaaagtaacttaaagaaccaatatgttacaaacctcaaacttaaaggac 9399815  T

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Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 15563905 - 15563848
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    |||||||||||||| |||||||||||||| | ||||||||||||||||| |||||||||    
T  15563905 gacttatgtgtgactaaaataacttaaaa-attaatctgttacaaaccttaaatttaaa 15563848  T

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Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 24827422 - 24827356
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    ||||||||||  ||||| ||| |||||||||| ||| |||||||||||||||||||| |||||||||    
T  24827422 aaaggacttagttgtgatcaatataacttaaatgaccaatctgttacaaacctcaaacttaaaggac 24827356  T

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Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 15564053 - 15564116
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaag 132  Q
    ||||||||||||||| || ||||||||||| ||||  ||||| |||||||| ||||||||||||    
T  15564053 aaaggacttatgtgtaacaaaaataacttagaagatcaatctattacaaacttcaaatttaaag 15564116  T

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Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 6220248 - 6220182
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    ||||||||||| ||| || ||||||||||||| ||| ||| |||| ||||||||||| |||||||||    
T  6220248 aaaggacttatctgttacaaaaataacttaaaggaccaatttgtttcaaacctcaaacttaaaggac 6220182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 27128148 - 27128213
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    ||||||||| ||||||| ||||||||| ||||| || ||||| |||||||||||||| |||||||||    
T  27128148 aaaggacttgtgtgtgatcaaaataacctaaaa-accaatctattacaaacctcaaacttaaaggac 27128213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 20209334 - 20209268
Alignment:
Q  64 tactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaagga 134  Q
    |||| |||| |||||||||||||||||||||||||    |||||| ||||||||||| |||| ||||||||    
T  20209334 tacttaaagaacttatgtgtgaccaaaataactta----actaatttgttacaaaccacaaacttaaagga 20209268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 20229042 - 20228976
Alignment:
Q  64 tactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaagga 134  Q
    |||| |||| |||||||||||||||||||||||||    |||||| ||||||||||| |||| ||||||||    
T  20229042 tacttaaagaacttatgtgtgaccaaaataactta----actaatttgttacaaaccacaaacttaaagga 20228976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 27052624 - 27052671
Alignment:
Q  146 caaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    |||||||||||||||||||||||| ||| |||||| ||||| ||||||    
T  27052624 caaaataacttaaaggaccaatctgttataaacctcaaacttaaagga 27052671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 27052666 - 27052729
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaag 132  Q
    |||||||||||||| ||| |||||||||||||  |  ||||| |||||||||||||| ||||||    
T  27052666 aaaggacttatgtgcgacaaaaataacttaaagaatcaatctattacaaacctcaaacttaaag 27052729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 29427960 - 29428019
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaacct 180  Q
    |||| ||||||||||||| | |||||||||||||||||| ||||||||| ||| ||||||    
T  29427960 caaacttaaaggacttatgtatgaccaaaataacttaaaagaccaatctgttagaaacct 29428019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 38414652 - 38414597
Alignment:
Q  76 ttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    |||||||||| |||||||| ||||| ||  ||| ||||||||||||||||||||||    
T  38414652 ttatgtgtgatcaaaataaattaaatgataaatatgttacaaacctcaaatttaaa 38414597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 14550023 - 14549957
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||| |||||||||||||||||||||| ||||  || ||| | |||||||||||||| ||| |||||    
T  14550023 aaagaacttatgtgtgaccaaaataacataaagaaccaatatattacaaacctcaaacttagaggac 14549957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 20209428 - 20209338
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttaca 116  Q
    ||||||||||   ||||||||||| |||||  | |||| ||| |||| | |||| ||||||||||||||||||||  || |||||||||||    
T  20209428 gtttggttaaagaaaggactaaatagaaaatgtttacaaacttaaagtatttatttgtgaccaaaataacttaaagaaccaatctgttaca 20209338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 20229136 - 20229046
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttaca 116  Q
    ||||||||||   ||||||||||| |||||  | |||| ||| |||| | |||| ||||||||||||||||||||  || |||||||||||    
T  20229136 gtttggttaaagaaaggactaaatagaaaatgtttacaaacttaaagtatttatttgtgaccaaaataacttaaagaaccaatctgttaca 20229046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 24793129 - 24793055
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaa 100  Q
    ||||||||||||||| || ||||| ||||| || |||| | | |||| |||||||||| |||||||||| |||||    
T  24793129 gtttggttaacataatgattaaattgaaaatttttacaaatttaaagtacttatgtgtaaccaaaataatttaaa 24793055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 27052469 - 27052407
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    ||||||| |||||| ||||||||||||  ||| ||||| |||||||| ||||| |||||||||    
T  27052469 gacttatatgtgactaaaataacttaagggaccaatctattacaaacatcaaacttaaaggac 27052407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 14550009 - 14549965
Alignment:
Q  142 tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    ||||||||||||| ||||| |||||| |||||||||||| |||||    
T  14550009 tgaccaaaataacataaagaaccaatatattacaaacctcaaact 14549965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 28618863 - 28618907
Alignment:
Q  142 tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    |||||||||||||||||||||||| | ||||||||| | ||||||    
T  28618863 tgaccaaaataacttaaaggaccattttattacaaatcgtaaact 28618907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 7e-39; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 27 - 211
Target Start/End: Original strand, 29710490 - 29710675
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||||||||||||||||| |||||||| |||| ||| ||| |||||||||||||| ||||||||||||| ||| |||| |||||||| ||||||     
T  29710490 tttggttaacataaggactaaattgaaaagttttacaaacttaaatgacttatgtgtgacgaaaataacttaaaggaccaatccgttacaaatctcaaac 29710589  T
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    ||||| ||||||| | | ||||||||||| |||| ||||||||| |||||||| | ||||| ||||||  ||  ||||||||||||    
T  29710590 ttaaatgacttatgtgttaccaaaataacctaaaagaccaatctgttacaaacgtcaaacttaaaggactccaagtgtaatttagc 29710675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 37 - 217
Target Start/End: Complemental strand, 42312916 - 42312735
Alignment:
Q  37 ataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggact 136  Q
    ||||||||||||| ||||| || |||| | | |||||||||||||||||| |||||||  |||| ||| ||||| ||||||| |||||| ||||||||||    
T  42312916 ataaggactaaattgaaaacttttacaaatttaaaggacttatgtgtgacaaaaataaactaaatgaccaatctattacaaatctcaaacttaaaggact 42312817  T
Q  137 tatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagcttaaaa 217  Q
    ||| | |||||||||||||||||| ||||||| |||||||||||| ||||| |||||| | | ||||||||||||| |||||    
T  42312816 tatgtgtgaccaaaataacttaaatgaccaatatattacaaacctcaaacttaaaggacctcaggtgtaatttagcctaaaa 42312735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 193
Target Start/End: Original strand, 30869569 - 30869737
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||||| || |||||||| |||||  | |||| ||| |||||||||| | ||||  ||||||||||||| ||| ||||||||||||||||||||    
T  30869569 gtttggttaacaaaaagactaaattgaaaatgtttacaaacttaaaggacttacgcgtgataaaaataacttaaaggaccaatctgttacaaacctcaaa 30869668  T
Q  126 tttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
     |||||| |||||| | ||||||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  30869669 cttaaagaacttatgtatgaccaaaataacttaaaggaccaatcaattacaaacctcaaacttaaagga 30869737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 39 - 193
Target Start/End: Original strand, 27576513 - 27576668
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    |||||| |||| ||||| || |||| ||| ||||||||||||||||||||||||||| |||| ||| |||| ||||||||  ||||| ||||| ||||||    
T  27576513 aaggacaaaattgaaaacttttacaaacttaaaggacttatgtgtgaccaaaataacctaaaggaccaatcagttacaaatatcaaacttaaatgactta 27576612  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    | | |||||||||||||||||||||||||||| |||||||| | ||||| ||||||    
T  27576613 tgtgtgaccaaaataacttaaaggaccaatctgttacaaacgtcaaacttaaagga 27576668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 27280782 - 27280596
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||||  || ||||||||||||||  | |||| ||| |||||||||| |||| |||||||||||||||  || |||||| |||| |||||||||    
T  27280782 gtttggttaactgaatgactaaatcgaaaacgtttacaaacttaaaggacttacgtgttaccaaaataacttaagtgattaatctcttacgaacctcaaa 27280683  T
Q  126 tttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
     ||||| ||||||| | || | ||||||||||||||||||||| | | |||||| | ||||| |||||| |||||||||||||||||    
T  27280682 cttaaatgacttatgtgtggctaaaataacttaaaggaccaatttgtaacaaacttcaaacttaaaggacccctggtgtaatttagc 27280596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 39 - 193
Target Start/End: Original strand, 11975622 - 11975778
Alignment:
Q  39 aaggactaaatcgaaaagttatacatact-aaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactt 137  Q
    ||||||||||| |||||  | |||| ||| ||||||||||||||||||| ||||||||||||| ||| |||| ||||||||||||||| |||||||||||    
T  11975622 aaggactaaattgaaaatatttacaaacttaaaaggacttatgtgtgacaaaaataacttaaaggaccaatcagttacaaacctcaaacttaaaggactt 11975721  T
Q  138 atat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    || | | || ||||||||||||||||||||||| || |||| || ||||| ||||||    
T  11975722 atctgttacaaaaataacttaaaggaccaatctgtttcaaatctcaaacttaaagga 11975778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 29710441 - 29710294
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctat 171  Q
    |||||| ||||||||||||||||||||| ||| ||| |||||||||  ||||| ||||||||||||||| |||||||||||||||||||||  ||||| |    
T  29710441 gacttaagtgtgaccaaaataacttaaaggaccaatatgttacaaatatcaaacttaaaggacttatatgtgaccaaaataacttaaaggattaatctgt 29710342  T
Q  172 tacaaaccttaaactgaaaggatccctggtgtaatttagcttaaaaaa 219  Q
    ||||||| | ||||| |||||| ||| | ||||||||| | |||||||    
T  29710341 tacaaacgtcaaacttaaaggaccccagatgtaatttaacctaaaaaa 29710294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 209
Target Start/End: Complemental strand, 6694698 - 6694515
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    ||||||||||||||| |||||||| |||||  | | || ||| ||||||||||||||| || ||||||||||||| ||  ||||| ||||||||| ||||    
T  6694698 gtttggttaacataaagactaaattgaaaacgtttgcaaacttaaaggacttatgtgtaac-aaaataacttaaaggatcaatctattacaaaccacaaa 6694600  T
Q  126 tttaaaggacttatattg-accaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
     ||||||||||||| | | | |||||||||||||| ||||||| |||||||||||| ||||| |||| |  |||| |||||||||    
T  6694599 cttaaaggacttatgtgggaacaaaataacttaaaagaccaatttattacaaacctcaaacttaaagaacgcctgatgtaattta 6694515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 42312999 - 42313145
Alignment:
Q  65 actaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataactt-aaagga 162  Q
    ||||||| |||||||||||||||||||||| ||||| ||| ||| |||||||||  ||||||||||||||||||| | ||||||||||||||| ||||||    
T  42312999 actaaaaagacttatgtgtgaccaaaataatttaaaggaccaatttgttacaaatatcaaatttaaaggacttatgtgtgaccaaaataacttaaaagga 42313098  T
Q  163 ccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
     ||  || |||||||| | ||||| |||||||||| | |||||||||    
T  42313099 tcagcctgttacaaacgtcaaacttaaaggatcccagatgtaattta 42313145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 209
Target Start/End: Original strand, 44293957 - 44294125
Alignment:
Q  42 gactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat 141  Q
    ||||| ||||||||  | |||| ||| |||| |||||| |||||||||||||||||||| ||  ||||||||||||||||||||  |||| ||||||| |    
T  44293957 gactatatcgaaaatgtttacaaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacgtaaaagacttatgt 44294056  T
Q  142 -tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
     |||||||||||| ||||||||| ||| | |||||||||| ||| | ||||||  | ||||||||||||    
T  44294057 gtgaccaaaataatttaaaggactaatatgttacaaacctcaaatttaaaggacacgtggtgtaattta 44294125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 6222198 - 6222080
Alignment:
Q  75 cttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctatta 173  Q
    ||||||||||||||||||||||||||  ||||||||||||||||  | ||| |||||| |||||| | |||| ||||||||||||| ||||||| |||||    
T  6222198 cttatgtgtgaccaaaataacttaaataactaatctgttacaaattttaaacttaaag-acttatgtgtgactaaaataacttaaaagaccaatatatta 6222100  T
Q  174 caaaccttaaactgaaagga 193  Q
    ||||||||||||| ||||||    
T  6222099 caaaccttaaacttaaagga 6222080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 209
Target Start/End: Original strand, 27280822 - 27280962
Alignment:
Q  70 aaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatc 168  Q
    |||||||||||||| |||||||||||||||| ||  ||| |||||  ||||||||| |||||| |||||| | ||||||||||||||||||||  ||| |    
T  27280822 aaggacttatgtgttaccaaaataacttaaaggatcaatttgttatgaacctcaaacttaaagtacttatgtgtgaccaaaataacttaaagggtcaagc 27280921  T
Q  169 tattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    | |||||||||| ||||| |||||| | || ||||||||||    
T  27280922 tgttacaaacctcaaacttaaaggacctctagtgtaattta 27280962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 186
Target Start/End: Complemental strand, 4048370 - 4048209
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||||| || |||||||| |||||  | |||| |||  ||||| |||| ||||||||  |||||||||| ||| ||| |||||||||||||| |    
T  4048370 gtttggttaacaaaatgactaaattgaaaacgtttacaaacttcaaggatttatatgtgaccattataacttaaaggaccaatatgttacaaacctcaga 4048271  T
Q  126 tttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
     |||||| |||||| | ||||||||||||||||||| |  | |||||||||||||| |||||    
T  4048270 cttaaagaacttatgtgtgaccaaaataacttaaagaattagtctattacaaacctcaaact 4048209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 186
Target Start/End: Complemental strand, 11975602 - 11975455
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    ||||||||||| |||||  | || | ||| |||||||||||||||||||| ||||||||||| ||  ||| |||||||||||||||| ||||||||||||    
T  11975602 aaggactaaattgaaaacgtttaaaaacttaaaggacttatgtgtgaccacaataacttaaaggatcaatatgttacaaacctcaaacttaaaggactta 11975503  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    | | || | |||||||||||||  || ||| |||||||||||| |||||    
T  11975502 tgtgtgtcaaaaataacttaaa-aactaatttattacaaacctcaaact 11975455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 3198331 - 3198228
Alignment:
Q  74 acttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctatt 172  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||| |||||| |||||| | |||||   ||||||||||||| |||||| ||    
T  3198331 acttatgtgggaccaaaataacttaaaagaccaatttgttacaaacctcaaacttaaagaacttatgtgtgacc--cataacttaaaggatcaatctgtt 3198234  T
Q  173 acaaac 178  Q
    ||||||    
T  3198233 acaaac 3198228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 6694718 - 6694808
Alignment:
Q  45 taaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||||||||  | || | ||| |||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||| |||||||||    
T  6694718 taaatcgaaaacgtttataaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatatgttacaaacctcaaacttaaaggac 6694808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 31453054 - 31453120
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||||||||| |||||||||    
T  31453054 aaaggacttatgtgtgacaaaaataacttaaataactaatctgttacaaacctcaaacttaaaggac 31453120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 39 - 211
Target Start/End: Complemental strand, 40951785 - 40951614
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    ||||||||||||||||   | |||| ||| ||| |||||||||| ||||||||||||||||| ||| |||||| |||| |||||||| |||||  |||||    
T  40951785 aaggactaaatcgaaagcgtttacaaacttaaatgacttatgtgcgaccaaaataacttaaatgac-aatctggtacatacctcaaacttaaa-aactta 40951688  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    | | ||| |||||||||||||| || ||||||| |||||| || ||||| |||| | || || |||||||||||    
T  40951687 tttgtgagcaaaataacttaaatgatcaatctactacaaatctcaaacttaaagaacccttgatgtaatttagc 40951614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 136
Target Start/End: Original strand, 27576607 - 27576670
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggact 136  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| ||||| ||||||||||    
T  27576607 gacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacgtcaaacttaaaggact 27576670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 29710385 - 29710319
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    ||||||||||| |||||||||||||||||||| || ||||||||||||||| ||||| |||||||||    
T  29710385 aaaggacttatatgtgaccaaaataacttaaaggattaatctgttacaaacgtcaaacttaaaggac 29710319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 30662220 - 30662155
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaagga 134  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||| ||| | ||||||||||||    
T  30662220 aaaggacttatgtgtaatcaaaataacttaaaagactaatctgttacgaactttaaatttaaagga 30662155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 74 - 193
Target Start/End: Complemental strand, 30869529 - 30869409
Alignment:
Q  74 acttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctatt 172  Q
    |||||||| | |||||| ||||||||||||  ||||||| |||||  ||||| ||||||||||| | | | ||||||||||||| | ||||||||| |||    
T  30869529 acttatgttttaccaaagtaacttaaaagatcaatctgtcacaaatatcaaacttaaaggacttgtgtgtaaccaaaataactttagggaccaatcgatt 30869430  T
Q  173 acaaaccttaaactgaaagga 193  Q
    |||||||| ||||| ||||||    
T  30869429 acaaacctcaaacttaaagga 30869409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 74 - 209
Target Start/End: Complemental strand, 41666264 - 41666128
Alignment:
Q  74 acttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctatt 172  Q
    |||||||||| ||||||||| || |||| |  ||| |||||||||||||||| ||||||||||||||| | || ||||||||||||| || |||| | ||    
T  41666264 acttatgtgtaaccaaaatagctaaaaaaatcaatatgttacaaacctcaaacttaaaggacttatatataacaaaaataacttaaatgatcaatttgtt 41666165  T
Q  173 acaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    | |||||| ||||| ||||| | | | ||||||||||    
T  41666164 ataaacctcaaacttaaagggttcatagtgtaattta 41666128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 41666326 - 41666422
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||||||||||||||  | |||  |||  |||||||||||||||| | |||||||||||  ||| |||||||||||||||||||| |||||||||    
T  41666326 aaggactaaatcgaaaatgtttaccaactttaaggacttatgtgtgatcgaaataacttaagggacaaatctgttacaaacctcaaacttaaaggac 41666422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 42 - 142
Target Start/End: Complemental strand, 43258396 - 43258296
Alignment:
Q  42 gactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat 141  Q
    ||||||||||||||  | |||| ||| |||  ||||||||||||| ||||||||||||| ||  ||||| |||||||| |||| ||||||||||||||||    
T  43258396 gactaaatcgaaaatgtttacaaacttaaaacacttatgtgtgacaaaaataacttaaatgatcaatctattacaaacttcaattttaaaggacttatat 43258297  T
Q  142 t 142  Q
    |    
T  43258296 t 43258296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 180
Target Start/End: Complemental strand, 46713335 - 46713224
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaat 167  Q
    ||||||||||||||| |  ||||||| ||||| ||||||| | |||||||| ||||| ||||| ||||||| | ||||||||||||||||||  || |||    
T  46713335 aaaggacttatgtgttattaaaataatttaaatgactaatttattacaaacttcaaacttaaa-gacttatgtatgaccaaaataacttaaataactaat 46713237  T
Q  168 ctattacaaacct 180  Q
    |||||||||||||    
T  46713236 ctattacaaacct 46713224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 209
Target Start/End: Original strand, 6694740 - 6694822
Alignment:
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    ||||||||||||| | |||||||||||||||||||||||||| | |||||||||| ||||| |||||| ||| |||||||||||    
T  6694740 ttaaaggacttatgtgtgaccaaaataacttaaaggaccaatatgttacaaacctcaaacttaaagga-cccgggtgtaattta 6694822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 46713272 - 46713213
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaag 132  Q
    ||||||||| ||||||||||||||||||  |||||||| |||||||||||||||||||||    
T  46713272 gacttatgtatgaccaaaataacttaaataactaatctattacaaacctcaaatttaaag 46713213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 159
Target Start/End: Original strand, 4048398 - 4048516
Alignment:
Q  42 gactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat 141  Q
    ||||||||||||||  | |||| ||| ||||||||||||||| |||||||||||||||| ||  ||||||||||||| || |||  |||| || |||| |    
T  4048398 gactaaatcgaaaatgtttacaaacttaaaggacttatgtgtaaccaaaataacttaaatgatcaatctgttacaaatcttaaacctaaaagatttatgt 4048497  T
Q  142 -tgaccaaaataacttaaa 159  Q
     | ||||||||||||||||    
T  4048498 gtcaccaaaataacttaaa 4048516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 40951822 - 40951918
Alignment:
Q  35 acataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    |||||| |||||||| |||||  | |||| ||| ||| || ||||||||||||||||||||||||| ||  ||||| |||||||||||||| |||||    
T  40951822 acataatgactaaatagaaaatgtttacaaacttaaatgatttatgtgtgaccaaaataacttaaatgatcaatctattacaaacctcaaacttaaa 40951918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 136
Target Start/End: Complemental strand, 6222141 - 6222078
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggact 136  Q
    |||||||||||||| ||||||||||||||||| ||| | |||||||||| ||| ||||||||||    
T  6222141 gacttatgtgtgactaaaataacttaaaagaccaatatattacaaaccttaaacttaaaggact 6222078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 29019415 - 29019332
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatct 110  Q
    |||| |||||| || |||||||| |||||  | |||| ||| |||||||||||||||||||||||||||||||| ||| |||||    
T  29019415 tttgattaacagaatgactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgacaaatct 29019332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 22750377 - 22750319
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    ||||||||||||||||||||||||||||  |||||  |||||||||| |||||||||||    
T  22750377 gacttatgtgtgaccaaaataacttaaacaactaacatgttacaaacttcaaatttaaa 22750319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 27280881 - 27280947
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||| ||||||||||||||||||||||||||| |   || ||||||||||||||||| |||||||||    
T  27280881 aaagtacttatgtgtgaccaaaataacttaaagggtcaagctgttacaaacctcaaacttaaaggac 27280947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 195
Target Start/End: Complemental strand, 30662276 - 30662153
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctat 171  Q
    ||||||||||| |  ||||||| ||||| ||  ||||||||| ||| |||||| ||||||||||||| | | | |||||||||||||| ||| ||||| |    
T  30662276 gacttatgtgtaattaaaataatttaaatgatcaatctgttataaatctcaaacttaaaggacttatgtgtaatcaaaataacttaaaagactaatctgt 30662177  T
Q  172 tacaaaccttaaactgaaaggatc 195  Q
    ||| ||| ||||| | ||||||||    
T  30662176 tacgaactttaaatttaaaggatc 30662153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 4048267 - 4048205
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    |||| |||||||||||||||||||||||||||  | || ||| |||||||||||||| |||||    
T  4048267 aaagaacttatgtgtgaccaaaataacttaaagaattagtctattacaaacctcaaacttaaa 4048205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 134
Target Start/End: Original strand, 6069264 - 6069338
Alignment:
Q  60 tacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaagga 134  Q
    |||| ||| |||| |||||||| ||| |||||||||||||| |||  || |||||||||||||||| ||||||||    
T  6069264 tacaaacttaaagaacttatgtttgatcaaaataacttaaatgacatatatgttacaaacctcaaacttaaagga 6069338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 11975512 - 11975451
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    |||||||||||||||| | |||||||||||||| |||||| | |||||||||||||| |||||    
T  11975512 aaaggacttatgtgtgtcaaaaataacttaaaa-actaatttattacaaacctcaaacttaaa 11975451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 11975713 - 11975779
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    ||||||||||| ||| || ||||||||||||| ||| |||||||| |||| |||||| |||||||||    
T  11975713 aaaggacttatctgttacaaaaataacttaaaggaccaatctgtttcaaatctcaaacttaaaggac 11975779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 40081240 - 40081191
Alignment:
Q  144 accaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    |||||||||||||||| || ||||||||||||| ||||||||| ||||||    
T  40081240 accaaaataacttaaatgatcaatctattacaacccttaaacttaaagga 40081191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 40951870 - 40951939
Alignment:
Q  142 tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    |||||||||||||||||| || ||||||||||||||||| ||||| ||| || |  ||| ||||||||||    
T  40951870 tgaccaaaataacttaaatgatcaatctattacaaacctcaaacttaaacgaccgttggcgtaatttagc 40951939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 44293846 - 44293780
Alignment:
Q  64 tactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaagga 134  Q
    |||| |||| |||||||||||||||||||||||||    |||||| ||||||||||| |||| ||||||||    
T  44293846 tacttaaagaacttatgtgtgaccaaaataactta----actaatttgttacaaaccacaaacttaaagga 44293780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 3198461 - 3198537
Alignment:
Q  142 tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagcttaaaaa 218  Q
    ||||||||||||||||||  |||||| ||||| | |||| ||||| |||||| |  |||||||||||||| ||||||    
T  3198461 tgaccaaaataacttaaataaccaatttattatagacctcaaacttaaaggacctttggtgtaatttagcctaaaaa 3198537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 159
Target Start/End: Complemental strand, 22750434 - 22750350
Alignment:
Q  76 ttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaa 159  Q
    |||||| |||| ||||||| ||||| ||  ||| | |||||||||||||| ||||| ||||||| | ||||||||||||||||||    
T  22750434 ttatgtatgacaaaaataatttaaatgatcaatatattacaaacctcaaaattaaatgacttatgtgtgaccaaaataacttaaa 22750350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 11975574 - 11975507
Alignment:
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    ||||||||||||| | |||||| |||||||||||||| |||| | |||||||||| ||||| ||||||    
T  11975574 ttaaaggacttatgtgtgaccacaataacttaaaggatcaatatgttacaaacctcaaacttaaagga 11975507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 26185972 - 26186041
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttat 139  Q
    |||||||||||||||||||||||||| ||||| |||  |  ||||||| |||||||| |||||||| ||||    
T  26185972 aaaggacttatgtgtgaccaaaataatttaaaggaccca-atgttacacacctcaaacttaaaggaattat 26186041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 31453045 - 31453119
Alignment:
Q  120 ctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    |||||| ||||||||||||| | |||| |||||||||||||  || ||||| |||||||||| ||||| ||||||    
T  31453045 ctcaaacttaaaggacttatgtgtgacaaaaataacttaaataactaatctgttacaaacctcaaacttaaagga 31453119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 44293940 - 44293850
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttaca 116  Q
    ||||||||||   ||||||||||| |||||  | |||| ||| |||| | |||| ||||||||||||||||||||  || |||||||||||    
T  44293940 gtttggttaaagaaaggactaaatagaaaatgtttacaaacttaaagtatttatttgtgaccaaaataacttaaagaaccaatctgttaca 44293850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 26978395 - 26978282
Alignment:
Q  23 aacgtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctc 122  Q
    ||||||||||||||  ||||  ||||| |||||  | |||| ||| ||||||||| ||||| |||||||||  |||| ||||  || | ||||||||||     
T  26978395 aacgtttggttaaccgaaggtttaaattgaaaacgtctacaaacttaaaggacttgtgtgttaccaaaatattttaacagacctatttattacaaacctt 26978296  T
Q  123 aaatttaaaggact 136  Q
    ||||||||| ||||    
T  26978295 aaatttaaaagact 26978282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 30869474 - 30869409
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaagga 134  Q
    ||||||||| ||||| ||||||||||||| |  ||| ||||  |||||||||||||| ||||||||    
T  30869474 aaaggacttgtgtgtaaccaaaataactttagggaccaatcgattacaaacctcaaacttaaagga 30869409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 3198321 - 3198273
Alignment:
Q  143 gaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaag 191  Q
    ||||||||||||||||| ||||||| | |||||||||| ||||| ||||    
T  3198321 gaccaaaataacttaaaagaccaatttgttacaaacctcaaacttaaag 3198273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 3198449 - 3198513
Alignment:
Q  71 aggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||||| |||||||||||||||||||||  || ||| | ||| | |||||||| |||||||||    
T  3198449 aggacttaggtgtgaccaaaataacttaaataaccaatttattatagacctcaaacttaaaggac 3198513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 4048418 - 4048482
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaac 185  Q
    |||| ||||||||||||| | | |||||||||||||||| || |||||| ||||||| |||||||    
T  4048418 caaacttaaaggacttatgtgtaaccaaaataacttaaatgatcaatctgttacaaatcttaaac 4048482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 29019380 - 29019328
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctatta 173  Q
    |||| ||||||||||||| | |||||||||||||||||| ||| |||||||||    
T  29019380 caaacttaaaggacttatgtgtgaccaaaataacttaaacgacaaatctatta 29019328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 40081258 - 40081190
Alignment:
Q  67 taaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||| | |||||||| |||||||||||||||| ||  ||||| |||||| ||| ||| |||||||||    
T  40081258 taaaagaatttatgtgtaaccaaaataacttaaatgatcaatctattacaacccttaaacttaaaggac 40081190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 209
Target Start/End: Complemental strand, 33650567 - 33650382
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaag-actaatctgttacaaacctcaa 124  Q
    ||||||||||||||| |||||||| |||| |||   || ||| |||||||||| ||||||||||||||||||||||| || ||| ||||||| ||| |||    
T  33650567 gtttggttaacataaagactaaattgaaacgtttaccaaacttaaaggacttacgtgtgaccaaaataacttaaaaggaccaatatgttacataccacaa 33650468  T
Q  125 atttaaaggacttatattg-accaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    | ||||| ||||||| | | | |||||||||||||||||||||||| ||| |||||| ||||| |||||| |||||||||||||||    
T  33650467 acttaaatgacttatgtgggaacaaaataacttaaaggaccaatctgttataaacctcaaacttaaaggacccctggtgtaattta 33650382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 167
Target Start/End: Complemental strand, 52913292 - 52913165
Alignment:
Q  42 gactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctg-ttacaaacctcaaatttaaaggacttata 140  Q
    ||||||||||||||  | |||| ||| |||||||||||||||||| | ||||||||||| ||| |||||| |||||||||||||| |||||||||||||     
T  52913292 gactaaatcgaaaacgtttacaaacttaaaggacttatgtgtgactagaataacttaaaggaccaatctgtttacaaacctcaaacttaaaggacttatg 52913193  T
Q  141 t-tgaccaaaataacttaaaggaccaat 167  Q
    | ||||||||||||||||||||||||||    
T  52913192 tgtgaccaaaataacttaaaggaccaat 52913165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 69 - 209
Target Start/End: Complemental strand, 7490024 - 7489880
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaat 167  Q
    |||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||| | |||| ||||||| ||||| || ||||    
T  7490024 aaaggatttatgtgtgaccaaaataacttaaatgattaatctgttacaaacctcaaacttaaaggacttatgtgtgactaaaataatttaaatgatcaat 7489925  T
Q  168 ctattacaaaccttaaactgaaa---ggatccctggtgtaattta 209  Q
    || | |||||||| ||||| |||    ||||||||||||||||||    
T  7489924 ctctcacaaacctcaaacttaaatgccgatccctggtgtaattta 7489880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 69 - 207
Target Start/End: Complemental strand, 52913158 - 52913017
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgtt-acaaacctcaaatttaaa-ggacttatat-tgaccaaaataacttaaaggacca 165  Q
    |||||||||||||||||||| ||||||||||| ||| |||||||| |||||||||||| ||||| ||| |||| | |||||||||||||||||||||| |    
T  52913158 aaaggacttatgtgtgaccagaataacttaaatgaccaatctgtttacaaacctcaaacttaaaaggatttatgtgtgaccaaaataacttaaaggacta 52913059  T
Q  166 atctattacaaaccttaaactgaaaggatccctggtgtaatt 207  Q
    |||| |||||||| | ||||| ||| || |||||||||||||    
T  52913058 atctgttacaaacttcaaacttaaaagacccctggtgtaatt 52913017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 211
Target Start/End: Original strand, 33650582 - 33650756
Alignment:
Q  39 aaggactaaatcgaaaagttatacatact-aaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactt 137  Q
    |||||||||||| ||||  | |||| ||| ||||||||||||||| ||||||||||||||||| ||| ||||| ||||||||| |||| |||||||||||    
T  33650582 aaggactaaatcaaaaacgtttacaaacttaaaaggacttatgtgagaccaaaataacttaaaggaccaatctcttacaaaccacaaagttaaaggactt 33650681  T
Q  138 atat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    || |  || |||| |||||||||||| |||||| |||| ||||| ||||| |||||| | | | |||||||||||    
T  33650682 atgtgggaacaaagtaacttaaaggatcaatctgttacgaacctcaaacttaaaggacctcggatgtaatttagc 33650756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 40892516 - 40892636
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctat 171  Q
    ||||||||||||| | |||||||||||| | | |||||||||||||||||||||||||||||||||| | |||||||||||||||||| || |||| | |    
T  40892516 gacttatgtgtgatcgaaataacttaaa-gtccaatctgttacaaacctcaaatttaaaggacttatgtgtgaccaaaataacttaaatgatcaatatgt 40892614  T
Q  172 tacaaaccttaaactgaaagga 193  Q
    ||||||||| ||||| ||||||    
T  40892615 tacaaacctcaaactcaaagga 40892636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 209
Target Start/End: Original strand, 26879571 - 26879754
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    |||||||||||||| |||||||| |||||  | || | | | ||||||| ||| ||||| |||||||||||||| ||  |||||||| ||||| |||||     
T  26879571 tttggttaacataatgactaaattgaaaacgtttaaaaatttaaaggacatatatgtgatcaaaataacttaaaggatcaatctgtttcaaacttcaaac 26879670  T
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    ||||| ||||||| | |||  ||||||||||||| ||||||||| |||||||||| ||||| |||||| | ||||| |||||||    
T  26879671 ttaaaagacttatgtgtgataaaaataacttaaatgaccaatctgttacaaacctcaaacttaaaggacctctggtataattta 26879754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 211
Target Start/End: Original strand, 50727593 - 50727726
Alignment:
Q  79 tgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaattt-aaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaa 176  Q
    |||||||| ||||||||||||||||| |||||||||||||||| |||||| ||||||||||| |  ||| ||||||||||||| ||| ||| | ||| ||    
T  50727593 tgtgtgactaaaataacttaaaagacaaatctgttacaaaccttaaatttaaaaggacttatgtgcgactaaaataacttaaatgacaaatttgttagaa 50727692  T
Q  177 accttaaactgaaaggatccctggtgtaatttagc 211  Q
    |||| ||||| ||||||||||  ||||||||||||    
T  50727693 acctcaaacttaaaggatccc-agtgtaatttagc 50727726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 18608733 - 18608633
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    ||||||||||| |||||  | |||| ||| |||||||||| |||||||||||||||||||||  |  |||||||||||||||||||| ||||||||||||    
T  18608733 aaggactaaattgaaaacatttacaaacttaaaggacttaagtgtgaccaaaataacttaaagaatcaatctgttacaaacctcaaacttaaaggactta 18608634  T
Q  139 t 139  Q
    |    
T  18608633 t 18608633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 79 - 193
Target Start/End: Complemental strand, 7490074 - 7489959
Alignment:
Q  79 tgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaa 177  Q
    |||||||||||||||| ||||| ||  ||||| |||||||||||||| |||||||| |||| | |||||||||||||||||| ||  ||||| |||||||    
T  7490074 tgtgtgaccaaaataatttaaaggatcaatctattacaaacctcaaacttaaaggatttatgtgtgaccaaaataacttaaatgattaatctgttacaaa 7489975  T
Q  178 ccttaaactgaaagga 193  Q
    ||| ||||| ||||||    
T  7489974 cctcaaacttaaagga 7489959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 186
Target Start/End: Original strand, 18608749 - 18608909
Alignment:
Q  27 tttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaat 126  Q
    ||||||||||  ||| ||||||| |||||  | |||| ||| ||||||||||| | ||| ||||||||||||||| |  |||||||||||||| |||||     
T  18608749 tttggttaaccgaagaactaaattgaaaacgtttacaaacttaaaggacttatctatgatcaaaataacttaaaatatcaatctgttacaaacatcaaac 18608848  T
Q  127 ttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
     |||| ||||||| | ||| ||||||| |||||||||| ||| | ||| ||||||||||||    
T  18608849 gtaaacgacttatgtgtgatcaaaatagcttaaaggacaaatttgttataaaccttaaact 18608909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 52913098 - 52913034
Alignment:
Q  67 taaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||    
T  52913098 taaaaggatttatgtgtgaccaaaataacttaaaggactaatctgttacaaacttcaaacttaaa 52913034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 2633538 - 2633605
Alignment:
Q  72 ggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttat 139  Q
    |||||||| |||||||||||||||||||| ||| ||||||| |||||||||||| |||||||||||||    
T  2633538 ggacttatatgtgaccaaaataacttaaatgaccaatctgtcacaaacctcaaacttaaaggacttat 2633605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 1173162 - 1173075
Alignment:
Q  42 gactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaa 131  Q
    ||||||||||||||  | |||| ||| |||| |||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||    
T  1173162 gactaaatcgaaaatgtttacaaacttaaag-acttatgtgtgaccaaaataacttaaaa-actaatctgttataaacctcaaacttaaa 1173075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 139
Target Start/End: Original strand, 2633325 - 2633438
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    ||||||||||||||| ||||||||  ||||  | |||| | | |||||||||||| ||||| |||||||||||||  || ||| ||||||||||||||||    
T  2633325 gtttggttaacataatgactaaattaaaaatgtttacaaatttaaaggacttatgcgtgacaaaaataacttaaagaacaaatatgttacaaacctcaaa 2633424  T
Q  126 tttaaaggacttat 139  Q
     |||||| ||||||    
T  2633425 cttaaagaacttat 2633438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 34173412 - 34173316
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggact 136  Q
    |||||||||||||||||  | |||| | | ||||||||||| ||| |||||||||||||||| ||| |||||||||||||| ||||| ||||||||||    
T  34173412 aaggactaaatcgaaaacgt-tacaaatttaaaggacttatttgtaaccaaaataacttaaaggaccaatctgttacaaacatcaaacttaaaggact 34173316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 18204923 - 18205045
Alignment:
Q  67 taaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggacca 165  Q
    |||||| |||||||||||||||||||||  ||||| |  ||| |||||||||||||||| ||||| ||  ||| | |||| |||||||||||||  | ||    
T  18204923 taaaagaacttatgtgtgaccaaaataatctaaaa-atcaatatgttacaaacctcaaacttaaaagatctatgtatgactaaaataacttaaa--aaca 18205019  T
Q  166 atctattacaaaccttaaactgaaag 191  Q
    |||||||||||| |||||||||||||    
T  18205020 atctattacaaatcttaaactgaaag 18205045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 40892571 - 40892637
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggac 135  Q
    |||||||||||||||||||||||||||||||| ||  ||| |||||||||||||||| | |||||||    
T  40892571 aaaggacttatgtgtgaccaaaataacttaaatgatcaatatgttacaaacctcaaactcaaaggac 40892637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 136
Target Start/End: Original strand, 52913320 - 52913430
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||||| ||||||||||| |||||  | |||| ||| ||||||||||||||||| |||||||||| |||  |||||| | ||||||  || |||    
T  52913320 gtttggttaacagaaggactaaatagaaaacgtttacaaacttaaaggacttatgtgtgatcaaaataactcaaagaactaatttattacaagtctgaaa 52913419  T
Q  126 tttaaaggact 136  Q
     ||||||||||    
T  52913420 cttaaaggact 52913430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 34173390 - 34173318
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    |||||||||||||||||| | | |||||||||||||||||||||||||| |||||||| | ||||| ||||||    
T  34173390 caaatttaaaggacttatttgtaaccaaaataacttaaaggaccaatctgttacaaacatcaaacttaaagga 34173318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 50727642 - 50727709
Alignment:
Q  67 taaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaagga 134  Q
    |||||||||||||||| ||| ||||||||||||| ||| ||| ||||| |||||||||| ||||||||    
T  50727642 taaaaggacttatgtgcgactaaaataacttaaatgacaaatttgttagaaacctcaaacttaaagga 50727709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 1173262 - 1173343
Alignment:
Q  106 aatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaact 186  Q
    ||||| ||||||| ||||||||||||| |||||||| | || ||||||||||||||   ||||||||||||||||| |||||    
T  1173262 aatctattacaaaactcaaatttaaagaacttatatgtaactaaaataacttaaagtttcaatctattacaaacctcaaact 1173343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 138
Target Start/End: Complemental strand, 2633297 - 2633201
Alignment:
Q  42 gactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    ||||||||||||||  | |||| ||| ||| || |||||||| |||||||||||||||| ||  ||||| ||||||| |||||| ||||| ||||||    
T  2633297 gactaaatcgaaaatgtttacaaacttaaatgatttatgtgtaaccaaaataacttaaatgaacaatctattacaaatctcaaacttaaaagactta 2633201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 7490070 - 7490018
Alignment:
Q  142 tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggat 194  Q
    |||||||||||| |||||||| ||||||||||||||||| ||||| |||||||    
T  7490070 tgaccaaaataatttaaaggatcaatctattacaaacctcaaacttaaaggat 7490018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 186
Target Start/End: Complemental strand, 38698964 - 38698861
Alignment:
Q  79 tgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaa 177  Q
    ||||||||||||||||||||    || ||| ||||||||| |||||| |||||  |||||||| | ||||||||||| |||| ||| ||||| |||||||    
T  38698964 tgtgtgaccaaaataactta----accaatttgttacaaatctcaaagttaaacaacttatatgttaccaaaataacgtaaa-gacaaatctgttacaaa 38698870  T
Q  178 ccttaaact 186  Q
    |||||||||    
T  38698869 ccttaaact 38698861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 2633538 - 2633600
Alignment:
Q  132 ggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    |||||||||| |||||||||||||||||| ||||||||| | |||||||| ||||| ||||||    
T  2633538 ggacttatatgtgaccaaaataacttaaatgaccaatctgtcacaaacctcaaacttaaagga 2633600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 191
Target Start/End: Complemental strand, 18981138 - 18980993
Alignment:
Q  46 aaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tga 144  Q
    ||||||||||  | |||| ||| |||||||||||||||||||||||||||||| | ||  ||| | ||| ||| || ||| ||||| ||||||  | |||    
T  18981138 aaatcgaaaatgtttacaaacttaaaggacttatgtgtgaccaaaataacttatatgatcaatttattataaaacttaaacttaaa-gacttaggtgtga 18981040  T
Q  145 ccaaaataacttaaaggaccaatctattacaaaccttaaactgaaag 191  Q
    ||||||||| ||||| |  |||||||||| |||||| ||||| ||||    
T  18981039 ccaaaataatttaaaaggtcaatctattaaaaacctcaaacttaaag 18980993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 18608710 - 18608638
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    |||| ||||||||||||  | ||||||||||||||||||| | |||||| |||||||||| ||||| ||||||    
T  18608710 caaacttaaaggacttaagtgtgaccaaaataacttaaagaatcaatctgttacaaacctcaaacttaaagga 18608638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 30611954 - 30611887
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgtta-caaacctcaaatttaaaggact 136  Q
    |||||| ||||||||||| |||||||||||||| || ||  ||||| ||||||||||||||||||||||    
T  30611954 aaaggatttatgtgtgactaaaataacttaaaa-accaacatgttaccaaacctcaaatttaaaggact 30611887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 52913204 - 52913160
Alignment:
Q  69 aaaggacttatgtgtgaccaaaataacttaaaagactaatctgtt 113  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||||    
T  52913204 aaaggacttatgtgtgaccaaaataacttaaaggaccaatatgtt 52913160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 141
Target Start/End: Complemental strand, 18608616 - 18608581
Alignment:
Q  106 aatctgttacaaacctcaaatttaaaggacttatat 141  Q
    |||||||||||||||||||| |||||||||||||||    
T  18608616 aatctgttacaaacctcaaacttaaaggacttatat 18608581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 2633444 - 2633489
Alignment:
Q  76 ttatgtgtgaccaaaataacttaaaagactaatctgttacaaacct 121  Q
    ||||||||||||||||||||| |||  | |||||||||||||||||    
T  2633444 ttatgtgtgaccaaaataactaaaagaattaatctgttacaaacct 2633489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 6314353 - 6314295
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaagg 133  Q
    |||||||||||||  ||||||| ||||  ||| |||||||||||||||||||| |||||||    
T  6314353 gacttatgtgtgaaaaaaataatttaa--gacaaatctgttacaaacctcaaacttaaagg 6314295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 52913272 - 52913199
Alignment:
Q  122 caaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatct-attacaaaccttaaactgaaagga 193  Q
    |||| ||||||||||||| | |||| | |||||||||||||||||||||  |||||||||| ||||| ||||||    
T  52913272 caaacttaaaggacttatgtgtgactagaataacttaaaggaccaatctgtttacaaacctcaaacttaaagga 52913199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 2633610 - 2633657
Alignment:
Q  162 accaatctattacaaaccttaaactgaaaggatccctggtgtaatttag 210  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||    
T  2633610 accaatttattacaaacctcaaacttaaaggat-cctggtgtaatttag 2633657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 39 - 193
Target Start/End: Original strand, 1117 - 1272
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    |||||| |||| ||||| || |||| ||| ||||||||||||||||||||||||||| |||| ||| |||| ||||||||  ||||| ||||| ||||||    
T  1117 aaggacaaaattgaaaacttttacaaacttaaaggacttatgtgtgaccaaaataacctaaaggaccaatcagttacaaatatcaaacttaaatgactta 1216  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagga 193  Q
    | | |||||||||||||||||||||||||||| |||||||| | ||||| ||||||    
T  1217 tgtgtgaccaaaataacttaaaggaccaatctgttacaaacgtcaaacttaaagga 1272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 136
Target Start/End: Original strand, 1211 - 1274
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggact 136  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| ||||| ||||||||||    
T  1211 gacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacgtcaaacttaaaggact 1274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 211
Target Start/End: Complemental strand, 21675 - 21502
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    |||||||||||||||||  | |||| | | ||| ||||||||||||||| |||||| ||||| || || ||||||||||| |||||| ||||||||||||    
T  21675 aaggactaaatcgaaaacgtttacaaatttaaaagacttatgtgtgaccgaaataatttaaaggattagtctgttacaaatctcaaacttaaaggactta 21576  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaatttagc 211  Q
    | | |||  ||||||||||||| || ||||||||||||||||| ||||| ||||||  || |||||||||||||    
T  21575 tgtgtgattaaaataacttaaatgatcaatctattacaaacctcaaacttaaaggactccgggtgtaatttagc 21502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 201
Target Start/End: Original strand, 21702 - 21866
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    ||||||||||| ||||  || |||| ||| |||||| ||||||||||||||||||||||||||||  ||| | || ||||||| ||| ||||| ||||||    
T  21702 aaggactaaattgaaattttttacaaacttaaaggatttatgtgtgaccaaaataacttaaaagatcaatatattgcaaaccttaaacttaaaagactta 21801  T
Q  139 tat-tgaccaaaataactt-aaaggaccaatctattacaaaccttaaactgaaaggatccctggt 201  Q
    | | |||| |||||||||| |||||||||||||||||||||||| ||| | || ||| |||||||    
T  21802 tgtgtgacaaaaataacttaaaaggaccaatctattacaaacctcaaatttaatggacccctggt 21866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 12203 - 12035
Alignment:
Q  39 aaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggactta 138  Q
    ||||||| |||||||||  | |||| ||| ||||||||| |||||||| |||||||||| || ||| ||| ||||||||| |||||| |||||||   ||    
T  12203 aaggactcaatcgaaaatgtttacaaacttaaaggacttgtgtgtgacaaaaataactt-aaggaccaatttgttacaaatctcaaacttaaagggtata 12105  T
Q  139 tat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtgtaattta 209  Q
    | | ||||||||||||||| ||  |||||| |||||||||||| ||||| |||||| || ||||||||||||    
T  12104 tgtgtgaccaaaataacttgaa--accaatttattacaaacctcaaacttaaaggacccttggtgtaattta 12035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 12270 - 12373
Alignment:
Q  81 tgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaacc 179  Q
    ||||| |||||||| ||||| ||| |||||||||||||||||||| ||||  ||||||||| ||| ||||||||||||||  | ||||||||||||||||    
T  12270 tgtgatcaaaataagttaaa-gaccaatctgttacaaacctcaaacttaattgacttatatgtgatcaaaataacttaaa--atcaatctattacaaacc 12366  T
Q  180 ttaaact 186  Q
    | |||||    
T  12367 tcaaact 12373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 191
Target Start/End: Original strand, 2400 - 2517
Alignment:
Q  80 gtgtgaccaaaataacttaaaagac----taatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaa-ggaccaatctatta 173  Q
    |||||| |||||||||||||| |||    |||||||||||||||| |||| ||||| ||||||| | ||| |||||||||||||| ||||||||||||||    
T  2400 gtgtgatcaaaataacttaaatgacaaattaatctgttacaaaccacaaacttaaatgacttatgtgtgaacaaaataacttaaaaggaccaatctatta 2499  T
Q  174 caaaccttaaactgaaag 191  Q
    ||||||| ||||| ||||    
T  2500 caaacctcaaacttaaag 2517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 2457 - 2517
Alignment:
Q  73 gacttatgtgtgaccaaaataacttaaaa-gactaatctgttacaaacctcaaatttaaag 132  Q
    ||||||||||||| ||||||||||||||| ||| ||||| |||||||||||||| ||||||    
T  2457 gacttatgtgtgaacaaaataacttaaaaggaccaatctattacaaacctcaaacttaaag 2517  T

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Target: scaffold0128 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 185
Target Start/End: Original strand, 2595 - 2720
Alignment:
Q  60 tacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaa 158  Q
    |||| ||| |||| |||||||||| |  ||| |||||||||  || ||||||||| |||||||||| ||||||| ||||||| | ||||||||||| |||    
T  2595 tacaaacttaaagaacttatgtgttataaaagtaacttaaataac-aatctgttataaacctcaaacttaaaggtcttatatgtaaccaaaataacgtaa 2693  T
Q  159 aggaccaatctattacaaaccttaaac 185  Q
    || |||| | | |||||||||| ||||    
T  2694 agaaccattttcttacaaacctcaaac 2720  T

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Target: scaffold0128; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 2549 - 2440
Alignment:
Q  26 gtttggttaacataaggactaaatcgaaaagttatacatactaaaaggacttatgtgtgaccaaaataacttaaaagactaatctgttacaaacctcaaa 125  Q
    |||||||||| | |||||||| || | |||  | |||| ||| |||| ||||||||||||| ||||||| ||||| | ||||||| ||  |||| |||||    
T  2549 gtttggttaatagaaggactagataggaaacgtttacaaacttaaagaacttatgtgtgactaaaataaattaaatgtctaatcttttgtaaacttcaaa 2450  T
Q  126 tttaaaggac 135  Q
     |||||||||    
T  2449 cttaaaggac 2440  T

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Target: scaffold0571 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 9115 - 9066
Alignment:
Q  105 taatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataa 153  Q
    ||||| ||||||||| || |||||||||||||||||| ||||||||||||    
T  9115 taatcggttacaaacatctaatttaaaggacttatatgtgaccaaaataa 9066  T

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Target: scaffold1191 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1191
Description:

Target: scaffold1191; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 211
Target Start/End: Complemental strand, 1330 - 1222
Alignment:
Q  104 ctaatctgttacaaacctcaaatttaaaggacttatat-tgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaaggatccctggtg 202  Q
    |||||| ||||||||| || ||||| ||| |||||||| |||| ||||||||| ||| ||| ||| ||||| |||||| ||||| ||| |  | || |||    
T  1330 ctaatcggttacaaacatctaatttgaagaacttatatgtgactaaaataactaaaaagacgaatatattataaacctcaaacttaaaaggactctagtg 1231  T
Q  203 taatttagc 211  Q
    |||||||||    
T  1230 taatttagc 1222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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