View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6332_low_14 (Length: 269)
Name: NF6332_low_14
Description: NF6332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6332_low_14 |
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Alignment Details
Target: chr3 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 52476911 - 52477178
Alignment:
| Q |
1 |
cgtttcttagaatcacctttgctgactccttgctcgaaatgaaaacatgggtttccccaaacaacttggtcttgaagcaaaatccatatctgcaatgcat |
100 |
Q |
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| T |
52476911 |
cgtttcttagaatcacctttgctgactccttgctcgaaatgaaaacatgggtttccccaaacaacttggtcttgaagcaatttccatatctgcaatgcat |
52477010 |
T |
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| Q |
101 |
acacaacttagtcctctcttaagagtctcaaattctaagttcctctttgttactgttattttcactataactataaattgtcatcaagaacccgcatgtc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52477011 |
acacaacttagtcctctcttaagagtctcaaattctaagttcctctttgttactgttattttcactataactataaattgtcatcaagaacccgcatgtc |
52477110 |
T |
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| Q |
201 |
ttaaagttttggggtgaagatgttatgtccaattttatttatgtgatagctcaaagactaatatgatg |
268 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
52477111 |
ttaaagttttggggtgaagatgttatgtccaatttcatttatgtgatagctcaaagactaatatgatg |
52477178 |
T |
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