View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6332_low_15 (Length: 261)
Name: NF6332_low_15
Description: NF6332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6332_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 24968668 - 24968710
Alignment:
| Q |
203 |
caagttacacaagtataagtagtacctcgttttacatgtgaag |
245 |
Q |
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| T |
24968668 |
caagttacacaagcataagtagtacctcgttttacatgtgaag |
24968710 |
T |
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Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 109
Target Start/End: Original strand, 24968539 - 24968578
Alignment:
| Q |
70 |
gagaacaaaccccattcacaaaactcaaaaactgtagcac |
109 |
Q |
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| T |
24968539 |
gagaataaaccccattcacaaaactcaaaaactgtagcac |
24968578 |
T |
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