View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6333_low_8 (Length: 255)

Name: NF6333_low_8
Description: NF6333
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6333_low_8
NF6333_low_8
[»] chr4 (41 HSPs)
chr4 (79-228)||(20163968-20164117)
chr4 (79-228)||(17052515-17052665)
chr4 (79-228)||(20158517-20158666)
chr4 (79-228)||(20161193-20161342)
chr4 (79-225)||(13813905-13814052)
chr4 (79-228)||(13818474-13818624)
chr4 (79-228)||(22634996-22635146)
chr4 (79-228)||(12422808-12422952)
chr4 (79-228)||(30145643-30145792)
chr4 (86-228)||(24048538-24048680)
chr4 (79-228)||(18211464-18211613)
chr4 (79-228)||(28384711-28384860)
chr4 (79-228)||(15533079-15533228)
chr4 (79-228)||(36036812-36036961)
chr4 (79-228)||(49549153-49549302)
chr4 (85-228)||(13818390-13818534)
chr4 (79-161)||(631800-631883)
chr4 (140-228)||(24048454-24048542)
chr4 (79-128)||(10711779-10711828)
chr4 (79-128)||(10925549-10925598)
chr4 (168-228)||(4562843-4562903)
chr4 (168-228)||(5758525-5758585)
chr4 (168-228)||(9555018-9555078)
chr4 (168-228)||(14759061-14759121)
chr4 (168-228)||(14955829-14955889)
chr4 (168-228)||(23997035-23997095)
chr4 (168-228)||(33740785-33740845)
chr4 (168-221)||(25688391-25688444)
chr4 (79-128)||(27532706-27532755)
chr4 (168-228)||(12486220-12486280)
chr4 (168-228)||(15223495-15223555)
chr4 (83-161)||(14047266-14047344)
chr4 (182-228)||(17807017-17807063)
chr4 (77-155)||(5758514-5758593)
chr4 (168-226)||(38106896-38106953)
chr4 (79-155)||(9555012-9555089)
chr4 (79-155)||(14759050-14759127)
chr4 (79-155)||(14955818-14955895)
chr4 (79-155)||(25688385-25688462)
chr4 (79-155)||(33740779-33740856)
chr4 (121-161)||(38106819-38106860)
[»] scaffold0003 (1 HSPs)
scaffold0003 (79-228)||(70615-70764)
[»] chr6 (46 HSPs)
chr6 (79-228)||(27416597-27416746)
chr6 (79-228)||(27555400-27555549)
chr6 (83-228)||(22075460-22075605)
chr6 (79-228)||(23955229-23955378)
chr6 (79-228)||(4475655-4475804)
chr6 (79-228)||(27222692-27222841)
chr6 (79-228)||(12941081-12941230)
chr6 (121-229)||(23537882-23537991)
chr6 (79-228)||(28290964-28291113)
chr6 (81-200)||(23537764-23537885)
chr6 (79-161)||(2076229-2076312)
chr6 (168-228)||(14470830-14470890)
chr6 (168-228)||(8242361-8242421)
chr6 (168-228)||(11565350-11565410)
chr6 (168-228)||(11717010-11717070)
chr6 (168-228)||(12620403-12620463)
chr6 (168-228)||(23393590-23393650)
chr6 (168-228)||(23413498-23413558)
chr6 (168-228)||(31479532-31479592)
chr6 (168-221)||(22947616-22947669)
chr6 (168-221)||(22951572-22951625)
chr6 (167-228)||(23400625-23400686)
chr6 (168-221)||(23870060-23870113)
chr6 (168-221)||(23874016-23874069)
chr6 (168-228)||(16758664-16758724)
chr6 (168-228)||(22861704-22861764)
chr6 (168-228)||(23988252-23988312)
chr6 (140-229)||(25737812-25737902)
chr6 (140-229)||(34297841-34297931)
chr6 (79-128)||(18918656-18918705)
chr6 (79-128)||(18953559-18953608)
chr6 (188-228)||(19869156-19869196)
chr6 (174-229)||(1254114-1254169)
chr6 (178-228)||(16622796-16622846)
chr6 (79-160)||(14470824-14470906)
chr6 (79-155)||(8242355-8242432)
chr6 (79-155)||(11565344-11565421)
chr6 (79-155)||(11716999-11717076)
chr6 (79-155)||(12620392-12620469)
chr6 (79-155)||(22947610-22947687)
chr6 (79-155)||(22951566-22951643)
chr6 (79-155)||(23393584-23393661)
chr6 (79-155)||(23413492-23413569)
chr6 (79-155)||(23870054-23870131)
chr6 (79-155)||(23874010-23874087)
chr6 (168-228)||(2076235-2076295)
[»] chr3 (65 HSPs)
chr3 (79-228)||(11301735-11301884)
chr3 (79-228)||(12337116-12337266)
chr3 (79-228)||(12853433-12853583)
chr3 (79-228)||(8928937-8929087)
chr3 (79-219)||(17348806-17348947)
chr3 (79-228)||(10835011-10835160)
chr3 (83-228)||(13435682-13435827)
chr3 (79-228)||(23372613-23372762)
chr3 (79-228)||(51299393-51299542)
chr3 (79-228)||(40994-41143)
chr3 (79-228)||(3801830-3801979)
chr3 (79-228)||(54519457-54519606)
chr3 (79-228)||(18899310-18899462)
chr3 (79-228)||(9532118-9532267)
chr3 (140-228)||(16795424-16795512)
chr3 (79-228)||(14764865-14765014)
chr3 (79-224)||(29546012-29546157)
chr3 (79-190)||(38312964-38313075)
chr3 (79-228)||(20249919-20250063)
chr3 (79-161)||(15463821-15463904)
chr3 (79-161)||(23173241-23173323)
chr3 (167-228)||(15616125-15616186)
chr3 (167-228)||(19774146-19774207)
chr3 (168-228)||(5219796-5219856)
chr3 (168-228)||(7108187-7108247)
chr3 (168-228)||(7112122-7112182)
chr3 (168-228)||(11068562-11068622)
chr3 (168-228)||(11167163-11167223)
chr3 (168-228)||(11853655-11853715)
chr3 (168-228)||(15963446-15963506)
chr3 (168-228)||(15967370-15967430)
chr3 (168-228)||(15971294-15971354)
chr3 (168-228)||(22320078-22320138)
chr3 (168-228)||(22335133-22335193)
chr3 (168-228)||(28948410-28948470)
chr3 (168-228)||(55021325-55021385)
chr3 (79-128)||(4590236-4590285)
chr3 (79-128)||(17318585-17318634)
chr3 (168-228)||(4108859-4108919)
chr3 (168-228)||(4112708-4112768)
chr3 (168-228)||(30064333-30064393)
chr3 (168-227)||(14664374-14664433)
chr3 (168-227)||(14667538-14667597)
chr3 (140-229)||(11912347-11912437)
chr3 (79-128)||(8491808-8491856)
chr3 (79-128)||(14068138-14068187)
chr3 (171-228)||(18933426-18933483)
chr3 (168-228)||(14497897-14497956)
chr3 (168-228)||(16751971-16752031)
chr3 (140-229)||(16840272-16840362)
chr3 (140-213)||(51608606-51608680)
chr3 (168-225)||(15564800-15564857)
chr3 (77-155)||(28948402-28948481)
chr3 (170-227)||(15555586-15555646)
chr3 (79-155)||(7108181-7108258)
chr3 (79-155)||(7112116-7112193)
chr3 (79-155)||(11068556-11068633)
chr3 (79-155)||(11167152-11167229)
chr3 (79-155)||(15963440-15963517)
chr3 (79-155)||(15967364-15967441)
chr3 (79-155)||(15971288-15971365)
chr3 (79-155)||(22320072-22320149)
chr3 (79-155)||(22335127-22335204)
chr3 (79-155)||(55021319-55021396)
chr3 (168-228)||(15463827-15463887)
[»] chr5 (31 HSPs)
chr5 (79-228)||(22108518-22108668)
chr5 (79-228)||(22120661-22120811)
chr5 (79-228)||(38146488-38146637)
chr5 (79-228)||(33474001-33474150)
chr5 (79-228)||(23113472-23113621)
chr5 (79-228)||(22335342-22335491)
chr5 (79-228)||(22338872-22339021)
chr5 (79-228)||(41878721-41878871)
chr5 (79-228)||(19510322-19510471)
chr5 (79-228)||(28372151-28372300)
chr5 (79-228)||(37600078-37600226)
chr5 (79-175)||(42959488-42959584)
chr5 (168-228)||(11219504-11219564)
chr5 (168-228)||(11224090-11224150)
chr5 (168-228)||(11227912-11227972)
chr5 (168-228)||(15238187-15238247)
chr5 (168-228)||(20294463-20294523)
chr5 (168-228)||(24768632-24768692)
chr5 (168-228)||(11226106-11226166)
chr5 (168-228)||(11229902-11229962)
chr5 (172-228)||(18354750-18354806)
chr5 (168-228)||(19474242-19474302)
chr5 (168-228)||(20912322-20912382)
chr5 (81-178)||(9774889-9774984)
chr5 (177-228)||(40727468-40727519)
chr5 (168-228)||(10751766-10751826)
chr5 (79-161)||(22749105-22749187)
chr5 (140-229)||(36459468-36459558)
chr5 (85-178)||(22108484-22108578)
chr5 (79-155)||(11219498-11219575)
chr5 (79-155)||(20294457-20294534)
[»] scaffold0299 (1 HSPs)
scaffold0299 (76-228)||(5682-5835)
[»] scaffold1852 (1 HSPs)
scaffold1852 (80-228)||(890-1038)
[»] chr7 (61 HSPs)
chr7 (79-228)||(13891489-13891639)
chr7 (79-224)||(10607394-10607540)
chr7 (79-228)||(7520285-7520436)
chr7 (79-223)||(13891872-13892017)
chr7 (79-228)||(39268383-39268533)
chr7 (79-225)||(16582280-16582427)
chr7 (83-228)||(834115-834260)
chr7 (83-228)||(1199295-1199440)
chr7 (79-228)||(9752661-9752811)
chr7 (83-228)||(838203-838348)
chr7 (83-228)||(1203383-1203528)
chr7 (79-228)||(16110045-16110194)
chr7 (79-228)||(11660142-11660291)
chr7 (79-228)||(18871157-18871306)
chr7 (79-228)||(41283505-41283654)
chr7 (79-228)||(14420647-14420796)
chr7 (79-228)||(15166110-15166259)
chr7 (79-228)||(16004864-16005013)
chr7 (81-224)||(146362-146505)
chr7 (79-228)||(18606195-18606347)
chr7 (79-228)||(10897966-10898115)
chr7 (85-228)||(9752577-9752721)
chr7 (79-155)||(18301302-18301379)
chr7 (79-161)||(13919465-13919548)
chr7 (79-161)||(1860074-1860157)
chr7 (79-161)||(25928424-25928507)
chr7 (168-228)||(15083174-15083234)
chr7 (168-228)||(39721144-39721204)
chr7 (168-228)||(31674-31734)
chr7 (168-228)||(72441-72501)
chr7 (168-228)||(76550-76610)
chr7 (168-228)||(12706192-12706252)
chr7 (168-228)||(12713489-12713549)
chr7 (168-228)||(12717236-12717296)
chr7 (168-228)||(12722147-12722207)
chr7 (168-228)||(16908579-16908639)
chr7 (168-228)||(18277943-18278003)
chr7 (168-228)||(18281907-18281967)
chr7 (168-228)||(45171570-45171630)
chr7 (168-228)||(2531401-2531461)
chr7 (168-228)||(18424184-18424244)
chr7 (81-178)||(23666487-23666582)
chr7 (171-228)||(26291108-26291165)
chr7 (168-228)||(2833551-2833611)
chr7 (174-229)||(15213003-15213058)
chr7 (168-228)||(1860091-1860151)
chr7 (79-161)||(39721138-39721221)
chr7 (79-155)||(31668-31745)
chr7 (79-155)||(72430-72507)
chr7 (79-155)||(76539-76616)
chr7 (79-155)||(12706181-12706258)
chr7 (79-155)||(12713483-12713560)
chr7 (79-155)||(12717230-12717307)
chr7 (79-155)||(12722141-12722218)
chr7 (79-155)||(15083168-15083245)
chr7 (79-155)||(16908568-16908645)
chr7 (79-155)||(18277937-18278014)
chr7 (79-155)||(18281901-18281978)
chr7 (79-155)||(45171559-45171636)
chr7 (79-178)||(2531367-2531467)
chr7 (168-228)||(13919482-13919542)
[»] chr8 (30 HSPs)
chr8 (79-228)||(23427685-23427835)
chr8 (79-228)||(44385903-44386047)
chr8 (79-228)||(8415046-8415195)
chr8 (79-228)||(11774156-11774305)
chr8 (79-228)||(363128-363277)
chr8 (79-228)||(8729679-8729828)
chr8 (83-228)||(27942755-27942900)
chr8 (79-161)||(23913208-23913291)
chr8 (168-228)||(14399162-14399222)
chr8 (168-228)||(18864174-18864234)
chr8 (168-228)||(21409849-21409909)
chr8 (168-228)||(21804341-21804401)
chr8 (168-228)||(21829530-21829590)
chr8 (168-228)||(21974253-21974313)
chr8 (168-228)||(21978363-21978423)
chr8 (168-228)||(22110550-22110610)
chr8 (168-228)||(43250151-43250211)
chr8 (168-228)||(30941634-30941694)
chr8 (140-229)||(42560950-42561040)
chr8 (79-128)||(21386114-21386162)
chr8 (79-161)||(14399145-14399228)
chr8 (79-161)||(21409843-21409926)
chr8 (79-161)||(21804335-21804418)
chr8 (77-155)||(21974242-21974321)
chr8 (77-155)||(21978352-21978431)
chr8 (79-155)||(18864163-18864240)
chr8 (79-155)||(21829519-21829596)
chr8 (79-155)||(22110544-22110621)
chr8 (79-155)||(43250145-43250222)
chr8 (168-228)||(23913214-23913274)
[»] scaffold0023 (1 HSPs)
scaffold0023 (79-228)||(11637-11786)
[»] scaffold0002 (1 HSPs)
scaffold0002 (79-228)||(115414-115563)
[»] scaffold0124 (2 HSPs)
scaffold0124 (79-228)||(25637-25787)
scaffold0124 (81-228)||(37602-37749)
[»] chr1 (21 HSPs)
chr1 (85-228)||(22132168-22132312)
chr1 (79-228)||(29533747-29533896)
chr1 (79-228)||(32648927-32649076)
chr1 (79-228)||(16370785-16370934)
chr1 (79-228)||(20439222-20439371)
chr1 (168-228)||(1009211-1009271)
chr1 (168-228)||(1926865-1926925)
chr1 (168-228)||(16376885-16376945)
chr1 (168-228)||(20925879-20925939)
chr1 (168-228)||(33795982-33796042)
chr1 (168-228)||(39245238-39245298)
chr1 (168-228)||(39248793-39248853)
chr1 (168-228)||(52634217-52634277)
chr1 (79-161)||(41801331-41801413)
chr1 (171-228)||(20230209-20230266)
chr1 (168-228)||(41389734-41389794)
chr1 (79-128)||(21406208-21406256)
chr1 (79-155)||(1009205-1009282)
chr1 (79-155)||(1926854-1926931)
chr1 (79-155)||(16376874-16376951)
chr1 (79-155)||(20925868-20925945)
[»] scaffold0327 (1 HSPs)
scaffold0327 (79-228)||(18682-18832)
[»] scaffold0142 (1 HSPs)
scaffold0142 (79-228)||(8809-8959)
[»] scaffold1873 (1 HSPs)
scaffold1873 (79-228)||(550-700)
[»] scaffold0080 (2 HSPs)
scaffold0080 (79-228)||(33797-33946)
scaffold0080 (79-183)||(28371-28475)
[»] scaffold0012 (1 HSPs)
scaffold0012 (79-228)||(224212-224361)
[»] scaffold0544 (2 HSPs)
scaffold0544 (79-228)||(2-151)
scaffold0544 (79-228)||(3586-3735)
[»] scaffold0026 (1 HSPs)
scaffold0026 (79-228)||(109461-109610)
[»] chr2 (30 HSPs)
chr2 (79-228)||(21074577-21074726)
chr2 (79-228)||(37378896-37379045)
chr2 (81-227)||(9240536-9240682)
chr2 (79-228)||(19663627-19663776)
chr2 (79-228)||(20260117-20260266)
chr2 (79-228)||(10686316-10686465)
chr2 (79-228)||(6481644-6481793)
chr2 (79-228)||(6485111-6485260)
chr2 (168-228)||(10103366-10103426)
chr2 (168-228)||(12902676-12902736)
chr2 (168-228)||(24630117-24630177)
chr2 (168-228)||(30346727-30346787)
chr2 (168-228)||(31343866-31343926)
chr2 (168-228)||(41532512-41532572)
chr2 (168-228)||(24645100-24645160)
chr2 (168-228)||(24647043-24647103)
chr2 (168-228)||(24647876-24647936)
chr2 (168-228)||(27600320-27600380)
chr2 (177-228)||(27381063-27381114)
chr2 (177-228)||(27385033-27385084)
chr2 (95-161)||(9783953-9784020)
chr2 (79-140)||(6262295-6262355)
chr2 (79-155)||(10103355-10103432)
chr2 (79-155)||(12902665-12902742)
chr2 (79-155)||(24630106-24630183)
chr2 (79-155)||(24645094-24645171)
chr2 (79-155)||(24647037-24647114)
chr2 (79-155)||(24647870-24647947)
chr2 (79-155)||(30346716-30346793)
chr2 (80-155)||(41532501-41532577)
[»] scaffold0337 (1 HSPs)
scaffold0337 (79-228)||(10891-11041)
[»] scaffold1427 (1 HSPs)
scaffold1427 (79-228)||(60-209)
[»] scaffold0842 (1 HSPs)
scaffold0842 (79-228)||(5102-5251)
[»] scaffold0013 (1 HSPs)
scaffold0013 (79-161)||(74384-74467)
[»] scaffold0293 (1 HSPs)
scaffold0293 (79-155)||(21390-21467)
[»] scaffold0575 (2 HSPs)
scaffold0575 (79-161)||(7013-7096)
scaffold0575 (168-228)||(7030-7090)
[»] scaffold0410 (1 HSPs)
scaffold0410 (171-228)||(14796-14853)
[»] scaffold0525 (2 HSPs)
scaffold0525 (168-228)||(5600-5660)
scaffold0525 (77-161)||(5583-5668)
[»] scaffold0349 (2 HSPs)
scaffold0349 (168-228)||(11000-11060)
scaffold0349 (79-155)||(10994-11071)
[»] scaffold0166 (1 HSPs)
scaffold0166 (168-228)||(11129-11189)
[»] scaffold0141 (2 HSPs)
scaffold0141 (168-228)||(15644-15704)
scaffold0141 (79-155)||(15633-15710)
[»] scaffold0061 (2 HSPs)
scaffold0061 (168-228)||(68625-68685)
scaffold0061 (79-155)||(68614-68691)
[»] scaffold0028 (2 HSPs)
scaffold0028 (168-228)||(60395-60455)
scaffold0028 (79-155)||(60384-60461)
[»] scaffold0139 (1 HSPs)
scaffold0139 (79-128)||(24013-24062)
[»] scaffold0157 (1 HSPs)
scaffold0157 (168-228)||(34197-34257)
[»] scaffold0599 (1 HSPs)
scaffold0599 (140-229)||(4041-4131)
[»] scaffold0109 (1 HSPs)
scaffold0109 (79-128)||(37273-37322)
[»] scaffold0001 (2 HSPs)
scaffold0001 (79-140)||(153828-153888)
scaffold0001 (140-229)||(163636-163726)
[»] scaffold0372 (1 HSPs)
scaffold0372 (168-228)||(6390-6449)
[»] scaffold0380 (1 HSPs)
scaffold0380 (79-128)||(3928-3977)
[»] scaffold0029 (1 HSPs)
scaffold0029 (79-128)||(62915-62963)
[»] scaffold0486 (1 HSPs)
scaffold0486 (172-228)||(8530-8586)
[»] scaffold0200 (1 HSPs)
scaffold0200 (79-130)||(10712-10761)


Alignment Details
Target: chr4 (Bit Score: 150; Significance: 2e-79; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 20164117 - 20163968
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcataatagaagacaacttagcaactatacgtaacatcatcaa 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20164117 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcataatagaagacaacttagcaactatacgtaacatcatcaa 20164018  T
Q  179 ttcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20164017 ttcataataatacttattcatcaaacatctcattatcaattcatgaataa 20163968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 17052665 - 17052515
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  17052665 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcatgaatagaagacaacttaacaactatacgtaacatcatca 17052566  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17052565 attcataataataattattcatcaaacatctcattatcaattcatgaataa 17052515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 20158666 - 20158517
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcataatagaagacaacttagcaactatacgtaacatcatcaa 178  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  20158666 cataacaacatcattaatttgtaaaaacatttctccaccaagcatctcattagcaactcataatagaagacaagttagcaactataagtaacatcatcaa 20158567  T
Q  179 ttcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20158566 ttcataataatacttattcatcaaacatctcattatcaattcatgaataa 20158517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 20161342 - 20161193
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcataatagaagacaacttagcaactatacgtaacatcatcaa 178  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  20161342 cataacaacatcattaattcgtaataacatttttccaccaagcatctcattagcaactcgttatagaagacaacttagcaactatacgtaacatcatcaa 20161243  T
Q  179 ttcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20161242 ttcataataatacttattcatcaaacatctcattatcaattcttgaataa 20161193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 79 - 225
Target Start/End: Complemental strand, 13814052 - 13813905
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  13814052 cataacaacatcattaattcgtaataacatttctccaccaaacatctcattagcaactcatgaatagaagacaacttatcaactatacgtaacatcatca 13813953  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaa 225  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  13813952 attcataataataattattcatcaaacatctcattataaattcatgaa 13813905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 13818624 - 13818474
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  13818624 cataacaacatcattaattcgtaataacatttctccaccaaacatctcattagcaactcatgaatagaagacaacttatcaactatacgtaacatcatca 13818525  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||    
T  13818524 attcataataataattattcatcaaacatctcattataaattcatggataa 13818474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 22635146 - 22634996
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||| ||||||||||| |||||||||||||||||||||    
T  22635146 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattatcaattcatgaataaaagacaacttatcaactatacgtaacatcatca 22635047  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  22635046 attcataataataattattcatcaaacatctcattataaattcatgaataa 22634996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 12422808 - 12422952
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12422808 cataacaacatcattaattcgtaataacatttctccatcaagcatctcattagcaactcatgaatagaagacaacttagcaactatacgtaacatcatca 12422907  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
          ||||||| |||||||||||||||||||||||||||||||||||||    
T  12422908 ------aataataattattcatcaaacatctcattatcaattcatgaataa 12422952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 30145643 - 30145792
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||    
T  30145643 cataacaacatcattaattcgtattaacatt-ctccaccaagcatctcattaacaactcatgaatagaagacaacttatcaactatacgtaacatcatca 30145741  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  30145742 attcataataataattattcatcaaacatttcattagcaattcatgaataa 30145792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 86 - 228
Target Start/End: Complemental strand, 24048680 - 24048538
Alignment:
Q  86 acatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatcaattcata 184  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24048680 acatcattaattcgtattaacatt-ctccaccaagcatctcattaacaactcatgaatagaagacaacttagcaactatacgtaacatcatcatttcata 24048582  T
Q  185 ataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||| ||||||||||||||| |||||| ||||||||||||||    
T  24048581 ataataattattcatcaaacatttcattaacaattcatgaataa 24048538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 18211464 - 18211613
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| || |||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  18211464 cataacaacatcattaattcgtattaacatt-ctccaccaagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 18211562  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  18211563 tttcataataataattattcatcaaacattccattagcaattcatgaataa 18211613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 28384711 - 28384860
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||| ||||||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  28384711 cataacagcatcattaattcgtattaacatt-ctccaccaagcacctcattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 28384809  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||| ||||||||  ||||| ||||||||||||||    
T  28384810 tttcataataataattattcctcaaacattccattagcaattcatgaataa 28384860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 15533079 - 15533228
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||| || |||| |||||||| |||||  |||||||||||||||||||||||||||||||    
T  15533079 cataacaacatcattaattcgtattaacatt-ctccactaagcaccttattaacaactcatgaataggggacaacttagcaactatacgtaacatcatca 15533177  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  15533178 tttcataataataattattcatcaaacattccattagcaattcatgaataa 15533228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 36036812 - 36036961
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| || |||| |||||||| |||||| ||||||||||||||||| |||||||||||||    
T  36036812 cataacaacatcattaattcgtattaacatt-ctccaccaagcaccttattaacaactcatgaatagaggacaacttagcaactatccgtaacatcatca 36036910  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||| ||||||  ||||| ||||||||||||||    
T  36036911 tttcataataataattattcatgaaacattccattagcaattcatgaataa 36036961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 49549302 - 49549153
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||| || |||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  49549302 cataacaacatcattaatttgtattaacatt-ctccaccaagcaccttattaacaactcatgaatagatgacaacttagcaactatacgtaacatcatca 49549204  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     | |||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  49549203 ttccataataataattattcatcaaacattccattagcaattcatgaataa 49549153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 13818534 - 13818390
Alignment:
Q  85 aacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcata-atagaagacaacttagcaactatacgtaacatcatcaattcat 183  Q
    |||||||| ||||| |||||| | || | || ||| ||||||||||  || ||||  ||| ||||||||||| |||||||||||||||||||||||||||    
T  13818534 aacatcatcaattcataataataattattcatcaaacatctcattataaattcatggataaaagacaacttatcaactatacgtaacatcatcaattcat 13818435  T
Q  184 aataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  13818434 aataataattattcatcaaacatctcattataaattcatgaataa 13818390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 631883 - 631800
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaact 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||    
T  631883 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcatgaatagaatacaacttatcaact 631800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 140 - 228
Target Start/End: Complemental strand, 24048542 - 24048454
Alignment:
Q  140 aatagaagacaacttagcaactatacgtaacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||| |||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  24048542 aataaaagacaacttagcaactatatgtaacatcatcatttcataataataattattcatcaaacatttcattagcaattcatgaataa 24048454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 10711779 - 10711828
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcat 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10711779 cataacaacatcattaattcgtaataacatttctccaccaagcatctcat 10711828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 10925549 - 10925598
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcat 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10925549 cataacaacatcattaattcgtaataacatttctccaccaagcatctcat 10925598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 4562903 - 4562843
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  4562903 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 4562843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 5758585 - 5758525
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  5758585 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 5758525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 9555018 - 9555078
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  9555018 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 9555078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 14759121 - 14759061
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  14759121 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 14759061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 14955889 - 14955829
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  14955889 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 14955829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 23997095 - 23997035
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  23997095 aacatcattaattcataataatgattattcatcaaacatctcattatcaattcatgaataa 23997035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 33740785 - 33740845
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  33740785 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 33740845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 25688391 - 25688444
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattca 221  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  25688391 aacatcattaattcataataataattattcatcaaacatctcattatcaattca 25688444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 27532706 - 27532755
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcat 128  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27532706 cataacaacatcattaatttgtaataacatttctccaccaagcatctcat 27532755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 12486220 - 12486280
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| |||||||||||||||||||| |||||||||| |||||    
T  12486220 aacatcattaattcataataataattattcatcaaacatctcatcatcaattcattaataa 12486280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 15223495 - 15223555
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||||| |||||||||||    
T  15223495 aacatcattaattcataataataattattcatcaaccatctcattatcatttcatgaataa 15223555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 14047266 - 14047344
Alignment:
Q  83 acaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaact 161  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||||||| |||||||| |||| || |||||||| |||||    
T  14047266 acaacatcattaattcgtattaatatt-ctccaccaagcatctcattaacaactcatgaataaaatacaacttatcaact 14047344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 17807017 - 17807063
Alignment:
Q  182 ataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||    
T  17807017 ataataataattattcatcaaacatctcattatcaattcattaataa 17807063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 5758593 - 5758514
Alignment:
Q  77 agcataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  5758593 agcataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 5758514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 38106896 - 38106953
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaat 226  Q
    |||||||| |||||||||||||| || |||||||||||| |||||| ||| ||||||||    
T  38106896 aacatcattaattcataataataattcttcatcaaacat-tcattagcaactcatgaat 38106953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 9555012 - 9555089
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  9555012 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 9555089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 14759127 - 14759050
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  14759127 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 14759050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 14955895 - 14955818
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  14955895 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 14955818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 25688385 - 25688462
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  25688385 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcactaataaaagacaactta 25688462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 33740779 - 33740856
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  33740779 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 33740856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 38106819 - 38106860
Alignment:
Q  121 catctcattagcaactcat-aatagaagacaacttagcaact 161  Q
    ||||||||||||||||||| |||||||||||||||| |||||    
T  38106819 catctcattagcaactcataaatagaagacaacttaacaact 38106860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 70615 - 70764
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcataatagaagacaacttagcaactatacgtaacatcatcaa 178  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  70615 cataacgacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcataatagaagacaacttagcaattatacgtaacatcatcaa 70714  T
Q  179 ttcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  70715 ttcataataatacttattcatcaaacatctcattatcaattcatgaataa 70764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 1e-74; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 27416746 - 27416597
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcataatagaagacaacttagcaactatacgtaacatcatcaa 178  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27416746 cataacgacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcataatagaagacaacttagcaattatacgtaacatcatcaa 27416647  T
Q  179 ttcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27416646 ttcataataatacttattcatcaaacatctcattatcaattcatgaataa 27416597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 27555400 - 27555549
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcataatagaagacaacttagcaactatacgtaacatcatcaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27555400 cataacaacatcattaattcgtaataacatttctccaccaagtatcacattagcaactcataatagaagacaacttaacaactatacgtaacatcatcaa 27555499  T
Q  179 ttcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27555500 ttcataataatacttattcatcaaacatctcattatcaattcatgaataa 27555549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 22075605 - 22075460
Alignment:
Q  83 acaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcataatagaagacaacttagcaactatacgtaacatcatcaattca 182  Q
    |||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22075605 acaacatcattaattcgtaataacatttcttccccaagcttctcattagcaactcataatagaagacaacttagcaactatacgtaacatcatcaattca 22075506  T
Q  183 taataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  22075505 taataatacttattcatcaaacatctcattatcaattcatgaataa 22075460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 23955229 - 23955378
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||| ||||||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  23955229 cataacagcatcattaattcgtattaacatt-ctccaccaagcacctcattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 23955327  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  23955328 tttcataataataattattcatcaaacattccattaacaattcatgaataa 23955378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 4475655 - 4475804
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||||||||||||||||  || ||||||| |||||||||||| || |||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  4475655 cataacaacatcattaattgatattaacatt-ctccaccaagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 4475753  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  4475754 tttcataataataattattcatcaaacattccattagcaattcatgaataa 4475804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 27222692 - 27222841
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| |||| || |||||||||||| || |||| |||||||| |||| | |||||||||||||||||||||||||||||||    
T  27222692 cataacaacatcattaattcgtattaacctt-ctccaccaagcaccttattaacaactcatgaatataggacaacttagcaactatacgtaacatcatca 27222790  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| ||||||||| |||||  ||||| ||||||||||||||    
T  27222791 tttcataataatagttattcatcgaacattccattagcaattcatgaataa 27222841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 12941081 - 12941230
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||||||||||||||||| |  ||||||| ||||||| |||| || |||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  12941081 cataacaacatcattaattcatgttaacatt-ctccacctagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 12941179  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||| | ||||||||||||||    
T  12941180 tttcataataataattattcatcaaacattccatcagcaattcatgaataa 12941230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 23537882 - 23537991
Alignment:
Q  121 catctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatcaattcataataatacttattcatcaaacatctcattatcaatt 219  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||   ||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  23537882 catctcattagcaattcatgaataaaagacaacttagcaactataataaacatcatcaattcataataataattattcatcaaacatctcattaacaatt 23537981  T
Q  220 catgaataag 229  Q
    || |||||||    
T  23537982 cacgaataag 23537991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 28291113 - 28290964
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||| |||| |  ||||||| ||||||| |||| || |||| ||||| || |||||| |||||||||||||||||||||||||||||||    
T  28291113 cataacaacatcatttattcatgttaacatt-ctccacctagcaccttattaacaacttatgaatagaggacaacttagcaactatacgtaacatcatca 28291015  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||   |||| ||||| ||||||||    
T  28291014 tttcataataataattattcatcaaacattcaattagcaatttatgaataa 28290964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 81 - 200
Target Start/End: Original strand, 23537764 - 23537885
Alignment:
Q  81 taacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgt-aacatcatcaa 178  Q
    ||||||||||||||||||||||||| | ||||||||||||||| |||||||||| |||| ||| |||||||||||||||||||| ||| ||| ||||||     
T  23537764 taacaacatcattaattcgtaataaaaattctccaccaagcatttcattagcaaatcatgaattgaagacaacttagcaactattcgtaaacgtcatcag 23537863  T
Q  179 ttcataataatacttattcatc 200  Q
    ||||||||||||  ||||||||    
T  23537864 ttcataataataaatattcatc 23537885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 2076229 - 2076312
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaact 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||| || |||||||| |||||    
T  2076229 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattatcaattcatgaataaaaaacaacttatcaact 2076312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 14470830 - 14470890
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14470830 aacatcattaattcataataataattattcatcaaacatctcattatcaattcatgaataa 14470890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 8242361 - 8242421
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  8242361 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 8242421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 11565350 - 11565410
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  11565350 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 11565410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 11717070 - 11717010
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  11717070 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 11717010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 12620463 - 12620403
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  12620463 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 12620403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 23393590 - 23393650
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23393590 aacatctttaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataa 23393650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 23413498 - 23413558
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23413498 aacatctttaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataa 23413558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 31479592 - 31479532
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  31479592 aacatcattaattcataataataattattcatcaaacatctcattatcatttcatgaataa 31479532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 22947616 - 22947669
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattca 221  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  22947616 aacatcattaattcataataataattattcatcaaacatctcattatcaattca 22947669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 22951572 - 22951625
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattca 221  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  22951572 aacatcattaattcataataataattattcatcaaacatctcattatcaattca 22951625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 23400625 - 23400686
Alignment:
Q  167 taacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||| | || ||||||||| |||||||||||||||||||||||||||||||||||||    
T  23400625 taacatcattactttataataataattattcatcaaacatctcattatcaattcatgaataa 23400686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 23870060 - 23870113
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattca 221  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  23870060 aacatcattaattcataataataattattcatcaaacatctcattatcaattca 23870113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 23874016 - 23874069
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattca 221  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  23874016 aacatcattaattcataataataattattcatcaaacatctcattatcaattca 23874069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 16758664 - 16758724
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||| ||||||||||| |||||    
T  16758664 aacatcattaattcataataataattattcatcaaacatctcactatcaattcattaataa 16758724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 22861704 - 22861764
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||||||||||| |||||    
T  22861704 aacatcattaattcataatcataattattcatcaaacatctcattatcaattcattaataa 22861764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 23988252 - 23988312
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| |||||    
T  23988252 aacatcattaattcataataataattattcatcaaacatttcattatcaattcattaataa 23988312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 25737812 - 25737902
Alignment:
Q  140 aatagaagacaacttagcaactatacgt-aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataag 229  Q
    |||||||||||||||| ||||||||| | ||||| |||||||||||| | || ||||||| ||| |||||||||| |||| ||||||||||    
T  25737812 aatagaagacaacttaacaactatacatcaacattatcaattcataacagtaattattcagcaagcatctcattagcaatacatgaataag 25737902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 34297931 - 34297841
Alignment:
Q  140 aatagaagacaacttagcaactatacgt-aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataag 229  Q
    |||||||||||||||||| ||||| | | ||| | |||||||||||| |||| ||||||||||| |||||||||| |||| ||||||||||    
T  34297931 aatagaagacaacttagccactatgcatcaacgttatcaattcataacaataattattcatcaaccatctcattagcaatacatgaataag 34297841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 18918705 - 18918656
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcat 128  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  18918705 cataataacatcattaatttgtaataacatttctccaccaagcatctcat 18918656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 18953608 - 18953559
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcat 128  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  18953608 cataacaacatcgttaatttgtaataacatttctccaccaagcatctcat 18953559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 19869156 - 19869196
Alignment:
Q  188 atacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19869156 atacttattcatcaaacatctcattatcaattcatgaataa 19869196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 1254114 - 1254169
Alignment:
Q  174 atcaattcataataatacttattcatcaaacatctcattatcaattcatgaataag 229  Q
    |||||||||||| |||| ||||||||||| |||||||||| |||| ||||||||||    
T  1254114 atcaattcataacaataattattcatcaaccatctcattaacaatacatgaataag 1254169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 16622796 - 16622846
Alignment:
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||| ||| | ||||||||||||||||||||||| |||||||||||    
T  16622796 attcataatgataatcattcatcaaacatctcattatcatttcatgaataa 16622846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 14470824 - 14470906
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaac 160  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| |||| |||| ||||||||||| ||||    
T  14470824 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaac 14470906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 8242355 - 8242432
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  8242355 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 8242432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 11565344 - 11565421
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  11565344 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 11565421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 11717076 - 11716999
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  11717076 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 11716999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 12620469 - 12620392
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  12620469 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 12620392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 22947610 - 22947687
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  22947610 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcactaataaaagacaactta 22947687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 22951566 - 22951643
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  22951566 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcactaataaaagacaactta 22951643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 23393584 - 23393661
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaactta 155  Q
    |||||||||||| |||||||||||||| | || | || ||| |||||||||| ||| |||| |||| |||||||||||    
T  23393584 cataacaacatctttaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataaaagacaactta 23393661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 23413492 - 23413569
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaactta 155  Q
    |||||||||||| |||||||||||||| | || | || ||| |||||||||| ||| |||| |||| |||||||||||    
T  23413492 cataacaacatctttaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataaaagacaactta 23413569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 23870054 - 23870131
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  23870054 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcactaataaaagacaactta 23870131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 23874010 - 23874087
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  23874010 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcactaataaaagacaactta 23874087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 2076235 - 2076295
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| ||||| |||||| | || | || ||| |||||||||||||||||||||||||    
T  2076235 aacatcattaattcgtaataacatttctccaccaagcatctcattatcaattcatgaataa 2076295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 1e-74; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 11301884 - 11301735
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcataatagaagacaacttagcaactatacgtaacatcatcaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11301884 cataacaacatcattaattcgtaataacatttctccaccaagcatcacaatagcaactcataatagaagacaacttagcaactatacgtaacatcatcaa 11301785  T
Q  179 ttcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11301784 ttcataataatacttattcatcaaacatctcattatcaattcatgaataa 11301735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 12337116 - 12337266
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcataatagaagacaacttagcaactatacgtaacatcatcaa 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12337116 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcataatagaagacaacttagcaactctacgtaacatcatcaa 12337215  T
Q  179 ttcataataatacttattcatcaaacatctc-attatcaattcatgaataa 228  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12337216 ttcataataatacttattcatcaaacatctcaattatcaattcatgaataa 12337266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 12853583 - 12853433
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  12853583 cataacaacatcattaattcgtaataacatttctccaccaaacatctcattagcaactcatgaatagaagacaacttaacaactatacgtaacatcatca 12853484  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12853483 attcataataataattattcatcaaacatctcattatcaattcatgaataa 12853433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 8929087 - 8928937
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  8929087 cataagaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcatgaatagaagacaacttagcaactatatgtaacatcatca 8928988  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||| |||||||||||||||||||||| || | |||||||||    
T  8928987 attcataataataattattcatcaaacatctcattagcagtccatgaataa 8928937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 79 - 219
Target Start/End: Complemental strand, 17348947 - 17348806
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17348947 cataacaacatcattaattcgtaataacatttctccaccaaatatctcattagcaactcatgaatagaagacaacttagcaactatacgtaacatcatca 17348848  T
Q  178 attcataataatacttattcatcaaacatctcattatcaatt 219  Q
     |||||||||||| ||||||||||||||||||||||||||||    
T  17348847 tttcataataataattattcatcaaacatctcattatcaatt 17348806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 10835160 - 10835011
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcataa-tagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  10835160 cataacaacatcattaattcgtattaacatta-tccaccaagcatctcattaacaactcataaatagaagacaacttagcaactatacgtaacatcatca 10835062  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| ||||||||||||||| ||||||  |||||||||||||    
T  10835061 tttcataataataattattcatcaaacatttcattagaaattcatgaataa 10835011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 13435682 - 13435827
Alignment:
Q  83 acaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatcaattc 181  Q
    ||||||||||| ||| ||| ||||||| |||||||||||||||||||| |||||||| ||| |||||||||||| |||||||||||||||||||||||||    
T  13435682 acaacatcattgatttgtattaacatt-ctccaccaagcatctcattaacaactcatgaattgaagacaacttaacaactatacgtaacatcatcaattc 13435780  T
Q  182 ataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  13435781 ataataataattattcatcaaacatttcattagcaattcatgaataa 13435827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 23372762 - 23372613
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| || |||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  23372762 cataacaacatcattaattcgtattaacatt-ctccaccaagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 23372664  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  23372663 tttcataataataattattcatcaaacattccattagcaattcatgaataa 23372613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 51299393 - 51299542
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| || |||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  51299393 cataacaacatcattaattcgtattaacatt-ctccaccaagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 51299491  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  51299492 tttcataataataattattcatcaaacattccattagcaattcatgaataa 51299542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 40994 - 41143
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||| ||||||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  40994 cataacagcatcattaattcgtattaacatt-ctccaccaagcacctcattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 41092  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||| ||||||||  ||||| ||||||||||||||    
T  41093 tttcataataataattattcctcaaacattccattagcaattcatgaataa 41143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 3801830 - 3801979
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| || |||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  3801830 cataacaacatcattaattcgtattaacatt-ctccaccaagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 3801928  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     | |||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  3801929 ttccataataataattattcatcaaacattccattagcaattcatgaataa 3801979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 54519457 - 54519606
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| || |||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  54519457 cataacaacatcattaattcgtattaacatt-ctccaccaagcaccttattaacaactcatgaatagatgacaacttagcaactatacgtaacatcatca 54519555  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     | |||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  54519556 ttccataataataattattcatcaaacattccattagcaattcatgaataa 54519606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 18899310 - 18899462
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| ||||||| |||||||| |||||| ||||||| |||||||||||||||||||||||    
T  18899310 cataacaacatcattaattcgtattaatatt-ctccaccaagcacctcattaacaactcatgaatagaggacaactcagcaactatacgtaacatcatca 18899408  T
Q  178 attcataataatacttattcatcaaacatctcattat---caattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||||   ||||||||||||||    
T  18899409 tttcataataataattattcatcaaacattccattattagcaattcatgaataa 18899462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 9532118 - 9532267
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||||||||||||||||| |  ||||||| ||||||| |||| || |||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  9532118 cataacaacatcattaattcatgttaacatt-ctccacctagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 9532216  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  9532217 tttcataataataattattcatcaaacattccattaacaattcatgaataa 9532267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 140 - 228
Target Start/End: Original strand, 16795424 - 16795512
Alignment:
Q  140 aatagaagacaacttagcaactatacgtaacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  16795424 aatagaagacaacttagcaactatacgtaacatcatcaattcataataataattattcatcaaacgtctcattatcaattcatgaataa 16795512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 14765014 - 14764865
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||||||||||||||||| |  ||||||| ||||||| |||| || |||| |||||||| |||||| |||||||||||||||||| ||||||||||||    
T  14765014 cataacaacatcattaattcatgttaacatt-ctccacctagcaccttattaacaactcatgaatagaggacaacttagcaactatatgtaacatcatca 14764916  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  14764915 tttcataataataattattcatcaaacattccattagcaattcatgaataa 14764865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 224
Target Start/End: Complemental strand, 29546157 - 29546012
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| ||||||||| || ||||||| |||||||| ||||||  |||||||| ||||||||| |||||||||||    
T  29546157 cataacaacatcattaattcgtattaacatt-ctccaccaaacacctcattaacaactcatgaatagagtacaacttaacaactatacataacatcatca 29546059  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatga 224  Q
     |||||||||||| ||||||||||||| |  ||||| ||||||||||    
T  29546058 tttcataataataattattcatcaaaccttccattagcaattcatga 29546012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 79 - 190
Target Start/End: Complemental strand, 38313075 - 38312964
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| || |||| |||||||| |||| | |||||||||||||||||||||||||||||||    
T  38313075 cataacaacatcattaattcgtattaacatt-ctccaccaagcaccttattaacaactcatgaatataggacaacttagcaactatacgtaacatcatca 38312977  T
Q  178 attcataataata 190  Q
     ||||||||||||    
T  38312976 tttcataataata 38312964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 20250063 - 20249919
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| || |||| |||||||| |||| | ||||||||||||||||     ||||||||||    
T  20250063 cataacaacatcattaattcgtattaacatt-ctccaccaagcaccttattaacaactcatgaatataggacaacttagcaacta-----aacatcatca 20249970  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| ||||||||| || ||  ||||| ||||||||||||||    
T  20249969 tttcataataatagttattcatcgaatattccattagcaattcatgaataa 20249919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 15463821 - 15463904
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaact 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||| ||||||||||| |||||    
T  15463821 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattatcaattcatgaataaaagacaacttatcaact 15463904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 23173241 - 23173323
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaact 161  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  23173241 cataacaacatcattaattcgtattaaca-ttctccaccaagcatctcattaacaactcatgaatagaagacaacttatcaact 23173323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 15616125 - 15616186
Alignment:
Q  167 taacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  15616125 taacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 15616186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 19774146 - 19774207
Alignment:
Q  167 taacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  19774146 taacatcattaattcataataataattattcatcaaacatctcattatcatttcatgaataa 19774207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 5219796 - 5219856
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  5219796 aacatcattaattcataataataattattcatcaaacgtctcattatcaattcatgaataa 5219856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 7108187 - 7108247
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  7108187 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 7108247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 7112122 - 7112182
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  7112122 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 7112182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 11068562 - 11068622
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  11068562 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 11068622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 11167223 - 11167163
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  11167223 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 11167163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 11853655 - 11853715
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11853655 aacatctttaattcataataatacttattcatcaaacatctcattatcaattcgtgaataa 11853715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 15963446 - 15963506
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15963446 aacatctttaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataa 15963506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 15967370 - 15967430
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15967370 aacatctttaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataa 15967430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 15971294 - 15971354
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15971294 aacatctttaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataa 15971354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 22320078 - 22320138
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  22320078 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 22320138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 22335133 - 22335193
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  22335133 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 22335193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 28948410 - 28948470
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  28948410 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 28948470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 55021325 - 55021385
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  55021325 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 55021385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 4590285 - 4590236
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcat 128  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4590285 cataacaacatcattaatttgtaataacatttctccaccaagcatctcat 4590236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 17318634 - 17318585
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcat 128  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17318634 cataacaacatcattaatttgtaataacatttctccaccaagcatctcat 17318585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 4108919 - 4108859
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| |||||||||||| |||||||||||||||||| |||||    
T  4108919 aacatcattaattcataataataattattcatcaaatatctcattatcaattcattaataa 4108859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 4112768 - 4112708
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| |||||||||||| |||||||||||||||||| |||||    
T  4112768 aacatcattaattcataataataattattcatcaaatatctcattatcaattcattaataa 4112708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 30064333 - 30064393
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||    
T  30064333 aacatcattaattcataataataattattcgtcaaacatctcattattaattcatgaataa 30064393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 14664374 - 14664433
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaata 227  Q
    |||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||||    
T  14664374 aacatcattaattcataaatataattattcatcaaacatctcattatcaattcatgaata 14664433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 14667538 - 14667597
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaata 227  Q
    |||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||||    
T  14667538 aacatcattaattcataaatataattattcatcaaacatctcattatcaattcatgaata 14667597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 11912347 - 11912437
Alignment:
Q  140 aatagaagacaacttagcaactatacgt-aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataag 229  Q
    |||||||||||||||||| ||||| | | ||| | |||||||||||| |||| ||||||||||| |||||||||| |||| ||||||||||    
T  11912347 aatagaagacaacttagccactatgcatcaacgttatcaattcataacaataattattcatcaaccatctcattagcaatacatgaataag 11912437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 8491856 - 8491808
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcat 128  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8491856 cataacaacatc-ttaattcgtaataacatttctccaccaagcatctcat 8491808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 14068187 - 14068138
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcat 128  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  14068187 cataacaacatcattaatttgtaataacatttctccaccaaacatctcat 14068138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 18933483 - 18933426
Alignment:
Q  171 atcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||    
T  18933483 atcattaattcataataataattattcgtcaaacatctcattattaattcatgaataa 18933426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 14497897 - 14497956
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  14497897 aacatcattaattcataataataattattcatc-aacatctcattatcaattcattaataa 14497956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 16752031 - 16751971
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||||| || ||||||||    
T  16752031 aacatcattaattcataataataattattcatcaaccatctcattatcatttgatgaataa 16751971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 16840362 - 16840272
Alignment:
Q  140 aatagaagacaacttagcaactatacgt-aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataag 229  Q
    |||||||||||||||| ||||||||| | ||| | |||||||||||| |||| ||||||| |||  ||||||||| |||| ||||||||||    
T  16840362 aatagaagacaacttaacaactatacatcaacgttatcaattcataacaataattattcagcaagaatctcattagcaatacatgaataag 16840272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 51608680 - 51608606
Alignment:
Q  140 aatagaagacaacttagcaactatacgt-aacatcatcaattcataataatacttattcatcaaacatctcatta 213  Q
    |||||||||||||||||| ||||| | | ||| | |||||||||||| |||| ||||||||||| ||||||||||    
T  51608680 aatagaagacaacttagccactatgcatcaacgttatcaattcataacaataattattcatcaaccatctcatta 51608606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 15564800 - 15564857
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaa 225  Q
    ||||||||||||||||||||||| || ||||| |||||| |||||| ||| |||||||    
T  15564800 aacatcatcaattcataataataattcttcataaaacatttcattagcaactcatgaa 15564857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 28948402 - 28948481
Alignment:
Q  77 agcataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  28948402 agcataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 28948481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 15555586 - 15555646
Alignment:
Q  170 catcatcaattcat---aataatacttattcatcaaacatctcattatcaattcatgaata 227  Q
    ||||||||||||||   ||||||| || ||||||||||||||||||| ||| |||||||||    
T  15555586 catcatcaattcatcctaataataattcttcatcaaacatctcattagcaactcatgaata 15555646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 7108181 - 7108258
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  7108181 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 7108258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 7112116 - 7112193
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  7112116 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 7112193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 11068556 - 11068633
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  11068556 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 11068633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 11167229 - 11167152
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  11167229 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 11167152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 15963440 - 15963517
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaactta 155  Q
    |||||||||||| |||||||||||||| | || | || ||| |||||||||| ||| |||| |||| |||||||||||    
T  15963440 cataacaacatctttaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataaaagacaactta 15963517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 15967364 - 15967441
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaactta 155  Q
    |||||||||||| |||||||||||||| | || | || ||| |||||||||| ||| |||| |||| |||||||||||    
T  15967364 cataacaacatctttaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataaaagacaactta 15967441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 15971288 - 15971365
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaactta 155  Q
    |||||||||||| |||||||||||||| | || | || ||| |||||||||| ||| |||| |||| |||||||||||    
T  15971288 cataacaacatctttaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataaaagacaactta 15971365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 22320072 - 22320149
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  22320072 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 22320149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 22335127 - 22335204
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  22335127 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 22335204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 55021319 - 55021396
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  55021319 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 55021396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 15463827 - 15463887
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| ||||| |||||| | || | || ||| |||||||||||||||||||||||||    
T  15463827 aacatcattaattcgtaataacatttctccaccaagcatctcattatcaattcatgaataa 15463887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 139; Significance: 8e-73; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 22108668 - 22108518
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22108668 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcatgaatagaagacaacttagcaactatacgtaacatcatca 22108569  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22108568 attcataataataattattcatcaaacatctcattatcaattcatgaataa 22108518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 22120811 - 22120661
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  22120811 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcatgaatagaaatcaacttagcaactatacgtaacatcatca 22120712  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22120711 tttcataataataattattcatcaaacatctcattatcaattcatgaataa 22120661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 38146637 - 38146488
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| || |||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  38146637 cataacaacatcattaattcgtattaacatt-ctccaccaagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 38146539  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  38146538 tttcataataataattattcatcaaacattccattagcaattcatgaataa 38146488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 33474150 - 33474001
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||| ||||||| |||||||| |||| | |||||||||||||||||||||||||||||||    
T  33474150 cataacagcatcattaattcgtattaacatt-ctccaccaagcacctcattaacaactcatgaataaaggacaacttagcaactatacgtaacatcatca 33474052  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  33474051 tttcataataataattattcatcaaacattccattaacaattcatgaataa 33474001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 23113621 - 23113472
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||| |||||||||||||||| ||||||| |||||||||||| || |||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  23113621 cataactacatcattaattcgtattaacatt-ctccaccaagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 23113523  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     | |||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  23113522 ttccataataataattattcatcaaacattccattagcaattcatgaataa 23113472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 22335342 - 22335491
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||| || |||| |||||||| |||||  ||||||||||||||||||||||||||||| |    
T  22335342 cataacaacatcattaattcgtattaacatt-ctccactaagcaccttattaacaactcatgaataggggacaacttagcaactatacgtaacatcatta 22335440  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  22335441 tttcataataataattattcatcaaacattccattagcaattcatgaataa 22335491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 22338872 - 22339021
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||| || |||| |||||||| |||||  ||||||||||||||||||||||||||||| |    
T  22338872 cataacaacatcattaattcgtattaacatt-ctccactaagcaccttattaacaactcatgaataggggacaacttagcaactatacgtaacatcatta 22338970  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  22338971 tttcataataataattattcatcaaacattccattagcaattcatgaataa 22339021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 41878871 - 41878721
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaa-gcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatc 176  Q
    ||||||||||||||||||||||| ||||||| ||||||||| ||| || |||| |||||||| |||||| ||||||||||||||||||||||||||||||    
T  41878871 cataacaacatcattaattcgtattaacatt-ctccaccaaagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatc 41878773  T
Q  177 aattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    | | |||||||||| |||||||||||||||  ||||| |||||||| |||||    
T  41878772 attccataataataattattcatcaaacattccattagcaattcataaataa 41878721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 19510322 - 19510471
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||||||||||||||||| |  ||||||| ||||||| |||| || |||| |||||||| |||||| |||||||||||||||||| ||||||||||||    
T  19510322 cataacaacatcattaattcatgttaacatt-ctccacctagcaccttattaacaactcatgaatagaggacaacttagcaactatatgtaacatcatca 19510420  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| ||||||||||||| |  ||||| ||||||||||||||    
T  19510421 tttcataataataattattcatcaaacgttccattagcaattcatgaataa 19510471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 28372300 - 28372151
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||| || |||| |||||||| ||||   ||||||||||||||||||||| |||||||||    
T  28372300 cataacaacatcattaatttgtattaacatt-ctccactaagcaccttattaacaactcatgaatatgggacaacttagcaactatacgtgacatcatca 28372202  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  28372201 tttcataataataattattcatcaaacattccattagcaattcatgaataa 28372151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 37600226 - 37600078
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| |||||||  |||||||||||  | |||| |||||||| |||||  | |||||||||||||||||||||||||||||    
T  37600226 cataacaacatcattaattcgtattaacatta-tccaccaagcactttattaacaactcatgaatagggg-caacttagcaactatacgtaacatcatca 37600129  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  37600128 tttcataataataattattcatcaaacattccattagcaattcatgaataa 37600078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 42959488 - 42959584
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcat 175  Q
    ||||||||||||||||||||||| ||||||| ||||||| |||| || |||| |||||||| |||||| |||||||||||||||||||||||||||||    
T  42959488 cataacaacatcattaattcgtattaacatt-ctccacctagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcat 42959584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 11219504 - 11219564
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  11219504 aacatcattaattcgtaatagtacttattcatcaaacatctcattatcaattcatgaataa 11219564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 11224090 - 11224150
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  11224090 aacatcattaattcgtaatagtacttattcatcaaacatctcattatcaattcatgaataa 11224150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 11227912 - 11227972
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  11227912 aacatcattaattcgtaatagtacttattcatcaaacatctcattatcaattcatgaataa 11227972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 15238247 - 15238187
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  15238247 aacatcattaattcataataataattattcatcaaacatctcattatcatttcatgaataa 15238187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 20294463 - 20294523
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  20294463 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 20294523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 24768692 - 24768632
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  24768692 aacatcattaattcataatattaattattcatcaaacatctcattatcaattcatgaataa 24768632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 11226106 - 11226166
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  11226106 aacatcattaattcgtaatagtacttattcatcaaacatctcatgatcaattcatgaataa 11226166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 11229902 - 11229962
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  11229902 aacatcattaattcgtaatagtacttattcatcaaacatctcatgatcaattcatgaataa 11229962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 18354750 - 18354806
Alignment:
Q  172 tcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  18354750 tcattaatttataataataattattcatcaaacatctcattatcaattcatgaataa 18354806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 19474302 - 19474242
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||| | |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  19474302 aacatcgttaattcataataataattattcatcaaacatctcattatcaattcattaataa 19474242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 20912382 - 20912322
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||||||| |||||||||||    
T  20912382 aacatcattaattcataacaataattattcatcaaacatctcattatcatttcatgaataa 20912322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 178
Target Start/End: Original strand, 9774889 - 9774984
Alignment:
Q  81 taacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatcaa 178  Q
    ||||||||||||  |||| || ||||||| ||||||| |||| || |||| |||||||| |||||| ||||||||||||||||||||||||||||||||    
T  9774889 taacaacatcat--attcatattaacatt-ctccacctagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatcaa 9774984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 40727519 - 40727468
Alignment:
Q  177 aattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  40727519 aattcataataataattattcatcaaacatctctttatcaattcatgaataa 40727468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 10751766 - 10751826
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||||| ||| |||||||    
T  10751766 aacatcattaattcataataataattattcatcaaccatctcattatcatttcttgaataa 10751826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 22749105 - 22749187
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaact 161  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| || |||| |||||||| |||| | ||||||||| |||||    
T  22749105 cataacaacatcattaattcgtattaaca-ttctccaccaagcaccttattaacaactcatgaatataggacaacttatcaact 22749187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 36459468 - 36459558
Alignment:
Q  140 aatagaagacaacttagcaactatacgt-aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataag 229  Q
    |||||||||||||||||| ||||| | | ||| | |||||||||||| |||| ||||||||||| |||||||||| |||  ||||||||||    
T  36459468 aatagaagacaacttagccactatgcatcaacgttatcaattcataacaataattattcatcaaccatctcattagcaaaacatgaataag 36459558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 178
Target Start/End: Complemental strand, 22108578 - 22108484
Alignment:
Q  85 aacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatcaa 178  Q
    |||||||| ||||| |||||| | || | || ||| |||||||||| ||| |||| |||| ||||||||||| ||| ||||||||||||||||||    
T  22108578 aacatcatcaattcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaattatacgtaacatcatcaa 22108484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 11219498 - 11219575
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaactta 155  Q
    ||||||||||||||||||||||||||  | || | || ||| |||||||||| ||| |||| |||| |||||||||||    
T  11219498 cataacaacatcattaattcgtaatagtacttattcatcaaacatctcattatcaattcatgaataaaagacaactta 11219575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 20294457 - 20294534
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  20294457 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 20294534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 5682 - 5835
Alignment:
Q  76 cagcataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcataatagaagacaacttagcaactatacgtaacatcat 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5682 cagcataacaacatcattaattcgtaataacatttctccaccaagcatttcattagcaactcataatagaagacaacttagcaactatacgtaacatcat 5781  T
Q  176 caattcataataatacttattcatcaaacatctc-attatcaattcatgaataa 228  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  5782 caattcataataatacttattcatcaaacgtctcaattatcaattcatgaataa 5835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 80 - 228
Target Start/End: Complemental strand, 1038 - 890
Alignment:
Q  80 ataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcataatagaagacaacttagcaactatacgtaacatcatcaat 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  1038 ataacaacatcattaattcgtaataacatttctccaccaagcatcacattagcaaatcataatagaagacaacttagaaactatacgtaacatcatcaat 939  T
Q  180 tcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  938 tcataataatacttattcatcaaacatctcattatcaattcatgaataa 890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 13891489 - 13891639
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13891489 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcatgaatagaagacaacttagcaactatacgtaacatcatca 13891588  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  13891589 attcataataataattattcatcaaacatctcattagcaattcatgaataa 13891639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 79 - 224
Target Start/End: Complemental strand, 10607540 - 10607394
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10607540 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcatgaatagaagacaacttagcaactatacgtaacatcatca 10607441  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatga 224  Q
     |||||||||||| |||||||||||||||||||||||||||||||||    
T  10607440 tttcataataataattattcatcaaacatctcattatcaattcatga 10607394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 7520436 - 7520285
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7520436 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcatgaatagaagacaacttagcaactatacgtaacatcatca 7520337  T
Q  178 attcataataat-acttattcatcaaacatctcattatcaattcatgaataa 228  Q
     ||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  7520336 tttcataataataatttattcatcaaacatctcattatcaattcatgaataa 7520285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 79 - 223
Target Start/End: Original strand, 13891872 - 13892017
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13891872 cataacaacatcattaattcgtaataacatttctccatcaagcatctcattagcaactcatgaatagaagacaacttagcaactatacgtaacatcatca 13891971  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatg 223  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||    
T  13891972 attcataataataattattcatcaaacatctcattagcaattcatg 13892017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 39268533 - 39268383
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  39268533 cataacaacatcattatttcgtaacaacaattctccaccaagcatctcattagcaactcatgaatagaagacaacttatcaactatacgtaacatcatca 39268434  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  39268433 attcataataataattattcatcaaacatctcattataaattcatgaataa 39268383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 79 - 225
Target Start/End: Original strand, 16582280 - 16582427
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||| |||||||||||    
T  16582280 cataacaacctcattaattcgtaataacatttctccaccaagcatctcattagtatctcatgaatagaagacaacttagcaactatacataacatcatca 16582379  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaa 225  Q
     |||||||||||| ||||||||||||||||||||||||||||||||||    
T  16582380 tttcataataataattattcatcaaacatctcattatcaattcatgaa 16582427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 834260 - 834115
Alignment:
Q  83 acaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatcaattc 181  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  834260 acaacatcattaattcgtattaacatt-ctccaccaagcatctcattaacaactcatgaatagaagacaacttaacaactatacgtaacatcatcaattc 834162  T
Q  182 ataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  834161 ataataataattattcatcaaacatttcattagcaattcatgaataa 834115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 1199440 - 1199295
Alignment:
Q  83 acaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatcaattc 181  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  1199440 acaacatcattaattcgtattaacatt-ctccaccaagcatctcattaacaactcatgaatagaagacaacttaacaactatacgtaacatcatcaattc 1199342  T
Q  182 ataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  1199341 ataataataattattcatcaaacatttcattagcaattcatgaataa 1199295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 9752811 - 9752661
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||| |||| |||| |||||| |||||||||||||||||||||    
T  9752811 cataacaacatcattaattcgtaataatatttctccaccaagcatctcattatcaattcatgaataaaagataacttatcaactatacgtaacatcatca 9752712  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||    
T  9752711 attcataataataattattcatcaaacatctcattataaattcatggataa 9752661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 838348 - 838203
Alignment:
Q  83 acaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatcaattc 181  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  838348 acaacatcattaattcgtattaacatt-ctccaccaagcatctcattaacaactcatgaatagaagacaacttaacaactatacgtaacatcatcaattc 838250  T
Q  182 ataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||| ||||||||||||||| | |||| ||||||||||||||    
T  838249 ataataataattattcatcaaacattttattagcaattcatgaataa 838203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 1203528 - 1203383
Alignment:
Q  83 acaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatcaattc 181  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  1203528 acaacatcattaattcgtattaacatt-ctccaccaagcatctcattaacaactcatgaatagaagacaacttaacaactatacgtaacatcatcaattc 1203430  T
Q  182 ataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||| ||||||||||||||| | |||| ||||||||||||||    
T  1203429 ataataataattattcatcaaacattttattagcaattcatgaataa 1203383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 16110194 - 16110045
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||| ||||||||||||||||| ||||||| ||||||| |||||||||||| |||||||| |||||||||||| ||| |||||||||||||||||||||    
T  16110194 cataataacatcattaattcgtattaacatt-ctccacccagcatctcattaacaactcatgaatagaagacaagttaacaactatacgtaacatcatca 16110096  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  16110095 attcataataataattattcatcaaacatttcattagcaattcatgaataa 16110045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 11660142 - 11660291
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||| ||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||| |    
T  11660142 cataaaaacatcattaatttgtattaacatt-ctccaccaagcatctcattaacaactcatgaatagaagacaacttagcaattatacgtaacatcataa 11660240  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  11660241 tttcataataataattattcatcaaacatttcattagcaattcatgaataa 11660291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 18871157 - 18871306
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| || |||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  18871157 cataacaacatcattaattcgtattaacatt-ctccaccaagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 18871255  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  18871256 tttcataataataattattcatcaaacattccattagcaattcatgaataa 18871306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 41283505 - 41283654
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||| ||||||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  41283505 cataacagcatcattaattcgtattaacatt-ctccaccaagcacctcattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 41283603  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| || ||||||||||||  ||||| ||||||||||||||    
T  41283604 tttcataataataatttttcatcaaacattccattagcaattcatgaataa 41283654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 14420647 - 14420796
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| ||||||||| || || |||| |||||||| |||||| ||||||||||||| |||||||||||||||||    
T  14420647 cataacaacatcattaattcgtattaacatt-ctccaccaaacaccttattaacaactcatgaatagaggacaacttagcaattatacgtaacatcatca 14420745  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  14420746 tttcataataataattattcatcaaacattccattagcaattcatgaataa 14420796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 15166110 - 15166259
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||| || |||| |||||||| |||||| |||||||||||||||||||| ||||||||||    
T  15166110 cataacaacatcattaattcgtattaacatt-ctccactaagcaccttattaacaactcatgaatagaggacaacttagcaactatacgcaacatcatca 15166208  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  15166209 tttcataataataattattcatcaaacattccattagcaattcatgaataa 15166259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 16004864 - 16005013
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| |||| || |||||||||||| || |||| |||||||| |||| | |||||||||||||||||||||||||||||||    
T  16004864 cataacaacatcattaattcgtattaacctt-ctccaccaagcaccttattaacaactcatgaatataggacaacttagcaactatacgtaacatcatca 16004962  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| ||||||||| |||||  ||||| ||||||||||||||    
T  16004963 tttcataataatagttattcatcgaacattccattagcaattcatgaataa 16005013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 81 - 224
Target Start/End: Original strand, 146362 - 146505
Alignment:
Q  81 taacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatcaat 179  Q
    ||||||||||||||||||||| |||| || |||||||||||| || |||| |||||||| |||||| |||| |||||||||||||||||||||||||| |    
T  146362 taacaacatcattaattcgtattaacgtt-ctccaccaagcaccttattaacaactcatgaatagaggacagcttagcaactatacgtaacatcatcatt 146460  T
Q  180 tcataataatacttattcatcaaacatctcattatcaattcatga 224  Q
    ||||||||||| |||||||||||||||  ||||| ||||||||||    
T  146461 tcataataataattattcatcaaacattccattagcaattcatga 146505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 18606195 - 18606347
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| || |||| |||||||| |||||| |||||||||||||||||| ||||||||||||    
T  18606195 cataacaacatcattaattcgtattaacatt-ctccaccaagcaccttattaacaactcatgaatagaggacaacttagcaactatatgtaacatcatca 18606293  T
Q  178 attc---ataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||   ||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  18606294 tttcataataataataattattcatcaaacattccattagcaattcatgaataa 18606347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 10898115 - 10897966
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||||||||||||||||| || || |||| |||||||||||| || |||| |||||||| |||||| ||||||||||||||||| |||||||||||||    
T  10898115 cataacaacatcattaattcctattagcatt-ctccaccaagcaccttattaacaactcatgaatagaggacaacttagcaactatgcgtaacatcatca 10898017  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||| ||||||  ||||| ||||||||||||||    
T  10898016 tttcataataataattattcataaaacattccattagcaattcatgaataa 10897966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 9752721 - 9752577
Alignment:
Q  85 aacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcata-atagaagacaacttagcaactatacgtaacatcatcaattcat 183  Q
    |||||||| ||||| |||||| | || | || ||| ||||||||||  || ||||  ||| ||||||||||| |||||||||||||||||||||||||||    
T  9752721 aacatcatcaattcataataataattattcatcaaacatctcattataaattcatggataaaagacaacttatcaactatacgtaacatcatcaattcat 9752622  T
Q  184 aataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  9752621 aataataattattcatcaaacatctcattataaattcatgaataa 9752577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 18301302 - 18301379
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaactta 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  18301302 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcagctcatgaatagaagacaactta 18301379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 13919548 - 13919465
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaact 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||| ||||||||||| |||||    
T  13919548 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattatcaattcatgaataaaagacaacttatcaact 13919465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 1860157 - 1860074
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaact 161  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||| |||| ||||||||||| |||||    
T  1860157 cataacaacatcattaattcgtaataacatttctccaccaaacatctcattatcaattcatgaataaaagacaacttatcaact 1860074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 25928507 - 25928424
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaact 161  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||| || |||||||| |||||    
T  25928507 cataacaacatcattaattcgtaataacatttctcaaccaagcatctcattagcaattcatgaataaaaaacaacttatcaact 25928424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 15083174 - 15083234
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15083174 aacatcattaattcataataataattattcatcaaacatctcattatcaattcatgaataa 15083234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 39721144 - 39721204
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39721144 aacatcattaattcataataataattattcatcaaacatctcattatcaattcatgaataa 39721204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 31674 - 31734
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  31674 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 31734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 72501 - 72441
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  72501 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 72441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 76610 - 76550
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  76610 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 76550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 12706252 - 12706192
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  12706252 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 12706192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 12713489 - 12713549
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  12713489 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 12713549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 12717236 - 12717296
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  12717236 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 12717296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 12722147 - 12722207
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  12722147 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 12722207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 16908639 - 16908579
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  16908639 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 16908579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 18277943 - 18278003
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  18277943 aacatcattaattcataataataattattcatcaaacatctcattatcaattcatcaataa 18278003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 18281907 - 18281967
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  18281907 aacatcattaattcataataataattattcatcaaacatctcattatcaattcatcaataa 18281967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 45171630 - 45171570
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  45171630 aacatctttaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataa 45171570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 2531461 - 2531401
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| |||||||| ||||||||| ||||||||||||||||||    
T  2531461 aacatcattaattcataataataattattcataaaacatctctttatcaattcatgaataa 2531401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 18424184 - 18424244
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||||| |||||||||||    
T  18424184 aacatcattaattcataataataattattcatcaaccatctcattatcatttcatgaataa 18424244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 178
Target Start/End: Complemental strand, 23666582 - 23666487
Alignment:
Q  81 taacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatcaa 178  Q
    ||||||||||||  |||| || ||||||| ||||||| |||| || |||| |||||||| |||||| ||||||||||||||||||||||||||||||||    
T  23666582 taacaacatcat--attcatattaacatt-ctccacctagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatcaa 23666487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 26291108 - 26291165
Alignment:
Q  171 atcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||    
T  26291108 atcattaattcataataataattattcgtcaaacatctcattattaattcatgaataa 26291165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 2833611 - 2833551
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||  ||||||||||||||| |||||||||||    
T  2833611 aacatcattaattcataataataattattcattgaacatctcattatcatttcatgaataa 2833551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 15213003 - 15213058
Alignment:
Q  174 atcaattcataataatacttattcatcaaacatctcattatcaattcatgaataag 229  Q
    |||||||||||| |||| ||||||||||| |||||||||| |||| ||||||||||    
T  15213003 atcaattcataacaataattattcatcaaccatctcattagcaatacatgaataag 15213058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 1860151 - 1860091
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| ||||| |||||| | || | || |||||||||||||||||||||||||||||    
T  1860151 aacatcattaattcgtaataacatttctccaccaaacatctcattatcaattcatgaataa 1860091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 39721138 - 39721221
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaact 161  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| |||| |||| ||||||||||| |||||    
T  39721138 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaact 39721221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 31668 - 31745
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  31668 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 31745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 72507 - 72430
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  72507 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 72430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 76616 - 76539
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  76616 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 76539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 12706258 - 12706181
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  12706258 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 12706181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 12713483 - 12713560
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  12713483 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 12713560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 12717230 - 12717307
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  12717230 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 12717307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 12722141 - 12722218
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  12722141 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 12722218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 15083168 - 15083245
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| |||| |||| |||||||||||    
T  15083168 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaactta 15083245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 16908645 - 16908568
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  16908645 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 16908568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 18277937 - 18278014
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| |||| |||| |||||||||||    
T  18277937 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcatcaataaaagacaactta 18278014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 18281901 - 18281978
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| |||| |||| |||||||||||    
T  18281901 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcatcaataaaagacaactta 18281978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 45171636 - 45171559
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaactta 155  Q
    |||||||||||| |||||||||||||| | || | || ||| |||||||||| ||| |||| |||| |||||||||||    
T  45171636 cataacaacatctttaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataaaagacaactta 45171559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 178
Target Start/End: Complemental strand, 2531467 - 2531367
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||||||||||||||||| |||||| | || | ||  || |||||| ||| ||| |||| |||| ||||||||||| |||||  || |||||||||||    
T  2531467 cataacaacatcattaattcataataataattattcataaaacatctctttatcaattcatgaataaaagacaacttatcaacttaacataacatcatca 2531368  T
Q  178 a 178  Q
    |    
T  2531367 a 2531367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 13919542 - 13919482
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| ||||| |||||| | || | || ||| |||||||||||||||||||||||||    
T  13919542 aacatcattaattcgtaataacatttctccaccaagcatctcattatcaattcatgaataa 13919482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 5e-68; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 23427685 - 23427835
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23427685 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcatgaatagaagacaacttagcaactatacgtaacatcatca 23427784  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||| ||||||||| ||||||||||||||| |||||||||||||||||||||    
T  23427785 atttataataataattattcatcaaacatttcattatcaattcatgaataa 23427835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 44386047 - 44385903
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  44386047 cataacaacatcattaattcgtaataacatttctcaaccaagcatctcattagcaactcatgaatagaagacaactcagcaactatacgtaacatcatca 44385948  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
          ||||||| |||||||||||||||||||||||||||||||||||||    
T  44385947 ------aataataattattcatcaaacatctcattatcaattcatgaataa 44385903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 8415195 - 8415046
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||| ||||||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  8415195 cataacaacatcattaattggtattaacatt-ctccaccaagcacctcattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 8415097  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  8415096 tttcataataataattattcatcaaacattccattagcaattcatgaataa 8415046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 11774156 - 11774305
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||| ||||||| |||||||| |||||| ||||||||| |||||||||||||||||||||    
T  11774156 cataacagcatcattaattcgtattaacatt-ctccaccaagcacctcattaacaactcatgaatagaggacaacttatcaactatacgtaacatcatca 11774254  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  11774255 tttcataataataattattcatcaaacattccattaacaattcatgaataa 11774305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 363128 - 363277
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||| |||||||||||||||| ||||||| |||||||||||| || |||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  363128 cataactacatcattaattcgtattaacatt-ctccaccaagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 363226  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     | |||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  363227 ttccataataataattattcatcaaacattccattagcaattcatgaataa 363277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 8729828 - 8729679
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| || |||| |||||  | |||||| |||||||||||||||||||||||||||||||    
T  8729828 cataacaacatcattaattcgtattaacatt-ctccaccaagcaccttattaacaactagtgaatagaggacaacttagcaactatacgtaacatcatca 8729730  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  8729729 tttcataataataattattcatcaaacattccattagcaattcatgaataa 8729679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 27942900 - 27942755
Alignment:
Q  83 acaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatcaattc 181  Q
    ||||| |||||| |||||| ||||||| |||||||||||| || |||| |||||||| |||||| ||||||||| |||||||||||||||||||||||||    
T  27942900 acaacttcattatttcgtattaacatt-ctccaccaagcaccttattaacaactcatgaatagaggacaacttaacaactatacgtaacatcatcaattc 27942802  T
Q  182 ataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  27942801 ataataataattattcatcaaacatttcattagcaattcatgaataa 27942755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 23913208 - 23913291
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaact 161  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||| |||| ||||||||||| |||||    
T  23913208 cataacaacatcattaattcgtaataacatttgtccaccaagcatctcattatcaattcatgaataaaagacaacttatcaact 23913291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 14399222 - 14399162
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14399222 aacatcattaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataa 14399162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 18864234 - 18864174
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18864234 aacatctttaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataa 18864174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 21409849 - 21409909
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  21409849 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 21409909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 21804341 - 21804401
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  21804341 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 21804401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 21829590 - 21829530
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  21829590 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 21829530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 21974313 - 21974253
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  21974313 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 21974253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 21978423 - 21978363
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  21978423 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 21978363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 22110550 - 22110610
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  22110550 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 22110610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 43250151 - 43250211
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  43250151 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 43250211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 30941694 - 30941634
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||| | ||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  30941694 aacatctttaattcgtaataatacttattcatcaaacatctcattatcaatttatgaataa 30941634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 42561040 - 42560950
Alignment:
Q  140 aatagaagacaacttagcaactatacgt-aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataag 229  Q
    |||||||||||||||||| ||||| | | ||| | |||||||||||| |||| ||||||||||| |||||||||| |||| ||||||||||    
T  42561040 aatagaagacaacttagccactatgcatcaacgttatcaattcataacaataattattcatcaaccatctcattagcaatgcatgaataag 42560950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 21386114 - 21386162
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcat 128  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  21386114 cataacaacatc-ttaactcgtaataacatttctccaccaagcatctcat 21386162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 14399228 - 14399145
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaact 161  Q
    ||||||||||||||||||||||||||| | || | || ||| |||||||||| ||| |||| |||| ||||||||||| |||||    
T  14399228 cataacaacatcattaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaact 14399145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 21409843 - 21409926
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaacttagcaact 161  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| ||||||||||| |||||    
T  21409843 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaact 21409926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 21804335 - 21804418
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaacttagcaact 161  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| ||||||||||| |||||    
T  21804335 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaact 21804418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 21974321 - 21974242
Alignment:
Q  77 agcataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  21974321 agcataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 21974242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 21978431 - 21978352
Alignment:
Q  77 agcataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  21978431 agcataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 21978352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 18864240 - 18864163
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaactta 155  Q
    |||||||||||| |||||||||||||| | || | || ||| |||||||||| ||| |||| |||| |||||||||||    
T  18864240 cataacaacatctttaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataaaagacaactta 18864163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 21829596 - 21829519
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  21829596 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 21829519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 22110544 - 22110621
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  22110544 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 22110621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 43250145 - 43250222
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  43250145 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 43250222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 23913214 - 23913274
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| ||||| |||||| | || | || ||| |||||||||||||||||||||||||    
T  23913214 aacatcattaattcgtaataacatttgtccaccaagcatctcattatcaattcatgaataa 23913274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 11637 - 11786
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcataatagaagacaacttagcaactatacgtaacatcatcaa 178  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  11637 cataacaacatcattaattcgtaataacatttcttcaccaagcatcacattagcaacttataatagaagacaacttcgcaactatacgtaacatcatcaa 11736  T
Q  179 ttcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11737 ttcataataatacttattcatcaaacatctcattatcaattcatgtataa 11786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 115563 - 115414
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcataatagaagacaacttagcaactatacgtaacatcatcaa 178  Q
    |||||| ||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  115563 cataaccacatcatcaatttgtaataacatttctccaccaaacatctcattagcaactcataatagaagacaacttagcaactatacgtaacatcatcaa 115464  T
Q  179 ttcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  115463 ttcataaaaatacttattcatcaaacatctcattatcaattcatgaataa 115414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 25787 - 25637
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||    
T  25787 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcatgaataggagacaacttaacaactatacgtaacatcatca 25688  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  25687 attcataataataattattcatcaaacatcacattatcaattcatgaataa 25637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 81 - 228
Target Start/End: Complemental strand, 37749 - 37602
Alignment:
Q  81 taacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatcaat 179  Q
    |||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||    
T  37749 taacaacatcattaattcatattaacatt-ctccaccaagcatctcattaacaactcatgaatagaagacaacttaacaactatacgtaacatcatcaat 37651  T
Q  180 tcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||| |||||||||||||||  ||||| |||| |||||||||    
T  37650 tcataataataattattcatcaaacattccattagcaatacatgaataa 37602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 22132312 - 22132168
Alignment:
Q  85 aacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatcaattcat 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  22132312 aacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcatgaatggaagacaacttagcatctatacgtaacatcatcaattcat 22132213  T
Q  184 aataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  22132212 aataataattattcatcaaacatctcattatcaattcatgaataa 22132168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 29533747 - 29533896
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||    
T  29533747 cataacaacatcattaattcgtattaacatt-ctccaccaagcatctcattaacaactcatgaatagaagacaacttaacaactatacgtaacatcatca 29533845  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  29533846 attcataataataattattcatcaaacatttcattagcaattcatgaataa 29533896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 32648927 - 32649076
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| || |||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  32648927 cataacaacatcattaattcgtattaacatt-ctccaccaagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 32649025  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  32649026 tttcataataataattattcatcaaacattccattagcaattcatgaataa 32649076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 16370785 - 16370934
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| || |||| |||||||| |||| |||||||||||||||||||||||||||||||||    
T  16370785 cataacaacatcattaattcgtattaacatt-ctccaccaagcaccttattaacaactcatgaatataagacaacttagcaactatacgtaacatcatca 16370883  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| ||||||||| |||||  ||||| ||||||||||||||    
T  16370884 tttcataataatagttattcatcgaacattccattagcaattcatgaataa 16370934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 20439371 - 20439222
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||| |||||||||||||||| ||||||| |||||||||||| || |||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  20439371 cataactacatcattaattcgtattaacatt-ctccaccaagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 20439273  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     | |||||||||| |||||||||||||||  ||||| |||| |||||||||    
T  20439272 ttccataataataattattcatcaaacattccattagcaatacatgaataa 20439222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 1009211 - 1009271
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  1009211 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 1009271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 1926925 - 1926865
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  1926925 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 1926865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 16376945 - 16376885
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  16376945 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 16376885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 20925939 - 20925879
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  20925939 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 20925879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 33795982 - 33796042
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  33795982 aacatcattaattcataataataattattcatcaaacatatcattatcaattcatgaataa 33796042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 39245298 - 39245238
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  39245298 aacatcattaattcataataataattattcatcaaacatctcattatcatttcatgaataa 39245238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 39248853 - 39248793
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  39248853 aacatcattaattcataataataattattcatcaaacatctcattatcatttcatgaataa 39248793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 52634217 - 52634277
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  52634217 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 52634277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 41801413 - 41801331
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaact 161  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||| ||| |||| |||| ||||||||||| |||||    
T  41801413 cataacaacatc-ttaattcgtaataatatttctccaccaagcatctcattatcaattcatgaataaaagacaacttatcaact 41801331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 20230266 - 20230209
Alignment:
Q  171 atcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  20230266 atcattaattcataataataattattcatcaaacatctcattattaattcatgaataa 20230209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 41389794 - 41389734
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||||| |||||||||||    
T  41389794 aacatcattaattcataataataattattcatcaaccatctcattatcatttcatgaataa 41389734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 21406208 - 21406256
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcat 128  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21406208 cataacaacatc-ttaattcgtaataacatttctccaccaagcatctcat 21406256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 1009205 - 1009282
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  1009205 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 1009282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 1926931 - 1926854
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  1926931 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 1926854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 16376951 - 16376874
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  16376951 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 16376874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 20925945 - 20925868
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  20925945 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 20925868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 18682 - 18832
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18682 cataacaacatcattaattcgtaataacattcctccaccaagcatttcattagcaactcatgaatagaagacaacttagcaactatacgtaacatcatca 18781  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||| ||||||| | |||||||||||||||||||||||||||||||||||||    
T  18782 atttataataacaattattcatcaaacatctcattatcaattcatgaataa 18832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 8959 - 8809
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8959 cataacaacatctttaattcgtaataacatttttccaccaagcatctcattagcaactcatgaatagaagacaacttagcaactatacgtaacatcatca 8860  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     || ||||||||| |||||||||||||||||||||||||||||||||||||    
T  8859 ttttataataataattattcatcaaacatctcattatcaattcatgaataa 8809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1873 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold1873
Description:

Target: scaffold1873; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 550 - 700
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||| |||| ||||||||||| |||||||||||||||||||||    
T  550 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattatcgattcatgaataaaagacaacttatcaactatacgtaacatcatca 649  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  650 attcataataataattattcatcaaacatctcattatcaattcatggataa 700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 33797 - 33946
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcata-atagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||| |||||||||||||||| ||||| | |||||||||||||||||||| ||||||||  ||| |||||||||||||||||||||||||||||||||    
T  33797 cataacgacatcattaattcgtattaacaat-ctccaccaagcatctcattaacaactcatggatataagacaacttagcaactatacgtaacatcatca 33895  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  33896 attcataataataattattcatcaaacatctcattagcaattcatgaataa 33946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 28371 - 28475
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcata-atagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||| |||||||||||||||| ||||| | |||||||||||||||||||| ||||||||  ||| |||||||||||||||||||||||||||||||||    
T  28371 cataacgacatcattaattcgtattaacaat-ctccaccaagcatctcattaacaactcatggatataagacaacttagcaactatacgtaacatcatca 28469  T
Q  178 attcat 183  Q
    ||||||    
T  28470 attcat 28475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 224361 - 224212
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  224361 cataacaacatcattaattcgtattaacatt-ctctaccaagcacctcattaacaactcatgaatagaagacaacttagcaactatacgtaacatcatca 224263  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  224262 tttcataataataattattcatcaaacattccattagcaattcatgaataa 224212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 151 - 2
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| || |||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  151 cataacaacatcattaattcgtattaacatt-ctccaccaagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 53  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  52 tttcataataataattattcatcaaacattccattagcaattcatgaataa 2  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 3735 - 3586
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||||||||||||||||| || ||||||| |||||||||||| || |||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  3735 cataacaacatcattaattcatattaacatt-ctccaccaagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 3637  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  3636 tttcataataataattattcatcaaacattccattagcaattcatgaataa 3586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 109461 - 109610
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| || |||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  109461 cataacaacatcattaattcgtattaacatt-ctccaccaagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 109559  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  109560 tttcataataataattattcatcaaacattccattagcaattcatgaataa 109610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 3e-44; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 21074726 - 21074577
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||||||||||||||||    
T  21074726 cataacaacatcattaattcatattaacatt-ctccaccaagcatctcattaacaattcatgaatagaaaacaacttagcaactatacgtaacatcatca 21074628  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| ||||||||||||||| |  ||| ||||||||||||||    
T  21074627 tttcataataataattattcatcaaacatttttttagcaattcatgaataa 21074577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 37378896 - 37379045
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||| ||||||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  37378896 cataacagcatcattaattcgtattaacatt-ctccaccaagcacctcattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatca 37378994  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| || ||||||||||||  ||||| ||||||||||||||    
T  37378995 tttcataataataatttttcatcaaacattccattagcaattcatgaataa 37379045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 227
Target Start/End: Original strand, 9240536 - 9240682
Alignment:
Q  81 taacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatcaat 179  Q
    ||||||||||||||||||||| |||| || |||||||||||| || |||| |||||||| |||||| ||||||||||||||||||||||||||||||| |    
T  9240536 taacaacatcattaattcgtattaacgtt-ctccaccaagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcatcatt 9240634  T
Q  180 tcataataatacttattcatcaaacatctcattatcaattcatgaata 227  Q
    ||||||||||| |||||||||||||||  ||||| |||||||||||||    
T  9240635 tcataataataattattcatcaaacattccattagcaattcatgaata 9240682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 19663776 - 19663627
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||| || |||| |||||||| |||||  |||||||||||||||||||||||||||||||    
T  19663776 cataacaacatcattaattcgtattaacatt-ctccactaagcaccttattaacaactcatgaataggggacaacttagcaactatacgtaacatcatca 19663678  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  19663677 tttcataataataattattcatcaaacattccattagcaattcatgaataa 19663627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 20260117 - 20260266
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||| || |||| |||||||| |||||  |||||||||||||||||||||||||||||||    
T  20260117 cataacaacatcattaattcgtattaacatt-ctccactaagcaccttattaacaactcatgaataggggacaacttagcaactatacgtaacatcatca 20260215  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  20260216 tttcataataataattattcatcaaacattccattagcaattcatgaataa 20260266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 10686465 - 10686316
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||||||||||||||||| |  ||||||| ||||||| |||| || |||| |||||||| |||||| |||||||||||||||||| ||||||||||||    
T  10686465 cataacaacatcattaattcatgttaacatt-ctccacctagcaccttattaacaactcatgaatagaggacaacttagcaactatatgtaacatcatca 10686367  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  10686366 tttcataataataattattcatcaaacattccattagcaattcatgaataa 10686316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 6481644 - 6481793
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||||||||||||||||| |  ||||||| ||||||| |||| || |||| |||||||| |||||| |||||||||||||||||| ||||||||||||    
T  6481644 cataacaacatcattaattcatgttaacatt-ctccacctagcaccttattaacaactcatgaatagaggacaacttagcaactatatgtaacatcatca 6481742  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| ||||||||||||| |  ||||| ||||||||||||||    
T  6481743 tttcataataataattattcatcaaacgttccattagcaattcatgaataa 6481793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 6485111 - 6485260
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||||||||||||||||| |  ||||||| ||||||| |||| || |||| |||||||| |||||| |||||||||||||||||| ||||||||||||    
T  6485111 cataacaacatcattaattcatgttaacatt-ctccacctagcaccttattaacaactcatgaatagaggacaacttagcaactatatgtaacatcatca 6485209  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     |||||||||||| ||||||||||||| |  ||||| ||||||||||||||    
T  6485210 tttcataataataattattcatcaaacgttccattagcaattcatgaataa 6485260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 10103426 - 10103366
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  10103426 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 10103366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 12902736 - 12902676
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  12902736 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 12902676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 24630177 - 24630117
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  24630177 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 24630117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 30346787 - 30346727
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  30346787 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 30346727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 31343866 - 31343926
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  31343866 aacatcattaattcataataataattattcatcaaacatctctttatcaattcatgaataa 31343926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 41532572 - 41532512
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41532572 aacatctttaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataa 41532512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 24645100 - 24645160
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||    
T  24645100 aacatcattaattcataataataattattcatcaaacatctcattaccaattcattaataa 24645160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 24647043 - 24647103
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||    
T  24647043 aacatcattaattcataataataattattcatcaaacatctcattaccaattcattaataa 24647103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 24647876 - 24647936
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||    
T  24647876 aacatcattaattcataataataattattcatcaaacatctcattaccaattcattaataa 24647936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 27600320 - 27600380
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  27600320 aacatcattaattcataacaataattattcatcaaacatctcattatcaattcattaataa 27600380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 27381114 - 27381063
Alignment:
Q  177 aattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  27381114 aattcataataataattattcatcaaacatctcattatcaattcattaataa 27381063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 27385084 - 27385033
Alignment:
Q  177 aattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  27385084 aattcataataataattattcatcaaacatctcattatcaattcattaataa 27385033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 9783953 - 9784020
Alignment:
Q  95 attcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaact 161  Q
    ||||||||||| |||||||||||||||||||||||| ||| |||| |||| ||||||||||| |||||    
T  9783953 attcgtaataagatttctccaccaagcatctcattatcaattcatgaataaaagacaacttatcaact 9784020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 6262355 - 6262295
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcata 140  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||| || |||| |||||||||    
T  6262355 cataacaacatcattaattcgtattaaca-ttctccactaagcaccttattaacaactcata 6262295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 10103432 - 10103355
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  10103432 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 10103355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 12902742 - 12902665
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  12902742 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 12902665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 24630183 - 24630106
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  24630183 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 24630106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 24645094 - 24645171
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  24645094 cataacaacatcattaattcataataataattattcatcaaacatctcattaccaattcattaataaaagacaactta 24645171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 24647037 - 24647114
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  24647037 cataacaacatcattaattcataataataattattcatcaaacatctcattaccaattcattaataaaagacaactta 24647114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 24647870 - 24647947
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  24647870 cataacaacatcattaattcataataataattattcatcaaacatctcattaccaattcattaataaaagacaactta 24647947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 30346793 - 30346716
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  30346793 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 30346716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 155
Target Start/End: Complemental strand, 41532577 - 41532501
Alignment:
Q  80 ataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaactta 155  Q
    ||||||||||| |||||||||||||| | || | || ||| |||||||||| ||| |||| |||| |||||||||||    
T  41532577 ataacaacatctttaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataaaagacaactta 41532501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 11041 - 10891
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatca-tc 176  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| || |||| |||||||| |||||| |||||||||||||||||||||||||||| ||    
T  11041 cataacaacatcattaattcgtattaacatt-ctccaccaagcaccttattaacaactcatgaatagaggacaacttagcaactatacgtaacatcaatc 10943  T
Q  177 aattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    | |||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  10942 atttcataataataattattcatcaaacattccattagcaattcatgaataa 10891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 60 - 209
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaactatacgtaacatcatca 177  Q
    |||||| |||||||||||||||| ||||||| || ||||||||| || |||| |||||||| |||||| |||||||||||||| ||||||||||||||||    
T  60 cataactacatcattaattcgtattaacatt-ctacaccaagcaccttattaacaactcatgaatagaggacaacttagcaacaatacgtaacatcatca 158  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
     | |||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  159 ttacataataataattattcatcaaacattccattagcaattcatgaataa 209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 5102 - 5251
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcata-atagaagacaacttagcaactatacgtaacatcatca 177  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| || |||  ||||||||  ||||||| ||||||| |||||||| ||||||||||||    
T  5102 cataacaacatcattaattcgtattaacatt-ctccaccaagcaccttattcacaactcatgtatagaaggcaacttaacaactatatgtaacatcatca 5200  T
Q  178 attcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||| |||||| |||||||||||||||  ||||| || |||||||||||    
T  5201 attcatcataataattattcatcaaacattccattagcatttcatgaataa 5251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 74467 - 74384
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaact 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||    
T  74467 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcatgaataaaagacaacttatcaact 74384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 21467 - 21390
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaactta 155  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||    
T  21467 cataacaacgtcattaattcgtaataacatttctccaccaagcatctcattagcaattcatgaataaaagacaactta 21390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 7096 - 7013
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaact 161  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| |||| |||| ||||||||||| |||||    
T  7096 cataacaacatcattaattcgtaataacatttcttcactaagcatctcattatcaattcatgaataaaagacaacttatcaact 7013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 7090 - 7030
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| ||||| |||||| | || ||||  || |||||||||||||||||||||||||    
T  7090 aacatcattaattcgtaataacatttcttcactaagcatctcattatcaattcatgaataa 7030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 14796 - 14853
Alignment:
Q  171 atcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14796 atcattaattcataataataattattcatcaaacatctcattatcaattcatgaataa 14853  T

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Target: scaffold0525 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 5660 - 5600
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  5660 aacatcattaattcataataacaattattcatcaaacatctcattatcaattcatgaataa 5600  T

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Target: scaffold0525; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 5668 - 5583
Alignment:
Q  77 agcataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaacttagcaact 161  Q
    |||||||||||||||||||||| |||||||| || | || ||| |||||||||| ||| |||| |||| ||||||||||| |||||    
T  5668 agcataacaacatcattaattcataataacaattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaact 5583  T

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Target: scaffold0349 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 11000 - 11060
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  11000 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 11060  T

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Target: scaffold0349; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 10994 - 11071
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  10994 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 11071  T

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Target: scaffold0166 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 11189 - 11129
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  11189 aacatcattaattcataatattaattattcatcaaacatctcattatcaattcatgaataa 11129  T

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Target: scaffold0141 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 15704 - 15644
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15704 aacatctttaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataa 15644  T

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Target: scaffold0141; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 15710 - 15633
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcat-aatagaagacaactta 155  Q
    |||||||||||| |||||||||||||| | || | || ||| |||||||||| ||| |||| |||| |||||||||||    
T  15710 cataacaacatctttaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataaaagacaactta 15633  T

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Target: scaffold0061 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 68685 - 68625
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  68685 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 68625  T

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Target: scaffold0061; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 68691 - 68614
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  68691 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 68614  T

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Target: scaffold0028 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 60455 - 60395
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  60455 aacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataa 60395  T

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Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 60461 - 60384
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactca-taatagaagacaactta 155  Q
    |||||||||||||||||||| |||||| | || | || ||| |||||||||| ||| ||| ||||| |||||||||||    
T  60461 cataacaacatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaactta 60384  T

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Target: scaffold0139 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 24062 - 24013
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcat 128  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24062 cataacaacatcattaatttgtaataacatttctccaccaagcatctcat 24013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 34257 - 34197
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| |||||||||||||||||||| |||||||||| |||||    
T  34257 aacatcattaattcataataataattattcatcaaacatctcatcatcaattcattaataa 34197  T

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Target: scaffold0599 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 4041 - 4131
Alignment:
Q  140 aatagaagacaacttagcaactatacgt-aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataag 229  Q
    |||||||||||||||||| ||||| | | ||| | |||||||||||| |||| ||||||||||| |||||||||| |||| ||||||||||    
T  4041 aatagaagacaacttagccactatgcatcaacgttatcaattcataacaataattattcatcaaccatctcattagcaatacatgaataag 4131  T

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Target: scaffold0109 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 37322 - 37273
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcat 128  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  37322 cataacaacatcgttaatttgtaataacatttctccaccaagcatctcat 37273  T

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Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 153888 - 153828
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcattagcaactcata 140  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||||    
T  153888 cataacaacatcattaattcatattaacatt-ctccaccaagcatctcattaacaactcata 153828  T

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Target: scaffold0001; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 163726 - 163636
Alignment:
Q  140 aatagaagacaacttagcaactatacgt-aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataag 229  Q
    |||||||||||||||| ||||||| | | ||| | |||||||||||| |||| ||||||| ||| |||||||||| |||  ||||||||||    
T  163726 aatagaagacaacttaacaactatccatcaacgttatcaattcataacaataattattcagcaagcatctcattaccaaaacatgaataag 163636  T

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Target: scaffold0372 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 6449 - 6390
Alignment:
Q  168 aacatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||||||| |||||||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  6449 aacatcattaattcataataatagttattcatc-aacatctcattatcaattcattaataa 6390  T

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Target: scaffold0380 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 3928 - 3977
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcat 128  Q
    ||||| ||||||||||||| |||||||||||||| |||||||||||||||    
T  3928 cataaaaacatcattaatttgtaataacatttctacaccaagcatctcat 3977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 62963 - 62915
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcat 128  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  62963 cataacaacatc-ttaatttgtaataacatttctccaccaagcatctcat 62915  T

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Target: scaffold0486 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 8530 - 8586
Alignment:
Q  172 tcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataa 228  Q
    |||| |||| ||||||||| | ||||||||||||||||||||||| |||||||||||    
T  8530 tcattaattaataataataatcattcatcaaacatctcattatcatttcatgaataa 8586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 10712 - 10761
Alignment:
Q  79 cataacaacatcattaattcgtaataacatttctccaccaagcatctcatta 130  Q
    |||||||||||| ||||| | |||||||||||||||||||||||||||||||    
T  10712 cataacaacatc-ttaat-cataataacatttctccaccaagcatctcatta 10761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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