View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6335_low_7 (Length: 369)
Name: NF6335_low_7
Description: NF6335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6335_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 10 - 307
Target Start/End: Complemental strand, 38837175 - 38836874
Alignment:
| Q |
10 |
agaagaagaacgatcgtggaaaaagcatgaaaaatgaattattccaagattttgaaaagaaggtcacatgtatgatccagcaataataaataactgtgtt |
109 |
Q |
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| T |
38837175 |
agaagaagaacgatggtggaaaaagcatgaaaaatgaattattccaagattttgaaaagaacgtcacacgtatgatccagcaataataaataactgtgtt |
38837076 |
T |
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| Q |
110 |
cttactgtaaaataacaatcacataccaaaaaacatgtatgttaacattact----gcaatgtcatgttttacaaccaattagttatcaaaagcttggcc |
205 |
Q |
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| T |
38837075 |
cttactgtaaaataacaatcacctaccaaaaaacatgtatgttaacattacttactgcaatgtcatgttttacaaccaattagttatcaaaagcttggcc |
38836976 |
T |
|
| Q |
206 |
tatataggtcaagctttcataaaattgaatgtggttccacaacttatatgacttatgaccgagagcttttctaagagttcaacaaaactgctacttctaa |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |
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| T |
38836975 |
tatataggtcaagctttcataaaattgaatgtggttccacaactcatatgacttatgaccaagagcttttctatgagttcaacaaaactgctacttctaa |
38836876 |
T |
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| Q |
306 |
ag |
307 |
Q |
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|| |
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| T |
38836875 |
ag |
38836874 |
T |
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