View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6336_low_6 (Length: 421)

Name: NF6336_low_6
Description: NF6336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6336_low_6
NF6336_low_6
[»] chr2 (26 HSPs)
chr2 (5-404)||(31420487-31420888)
chr2 (30-131)||(17457852-17457953)
chr2 (38-131)||(18369147-18369240)
chr2 (30-131)||(42705100-42705201)
chr2 (30-131)||(3371450-3371551)
chr2 (30-131)||(4171673-4171774)
chr2 (30-131)||(12806697-12806798)
chr2 (41-131)||(29683333-29683423)
chr2 (33-131)||(41594085-41594183)
chr2 (30-131)||(6880107-6880208)
chr2 (50-131)||(13572639-13572720)
chr2 (30-131)||(14379247-14379348)
chr2 (50-131)||(30432729-30432810)
chr2 (50-131)||(37609090-37609171)
chr2 (50-131)||(2395325-2395406)
chr2 (30-131)||(10748628-10748729)
chr2 (50-131)||(28921361-28921442)
chr2 (41-131)||(7877458-7877548)
chr2 (30-108)||(19204740-19204818)
chr2 (50-131)||(3948498-3948579)
chr2 (30-131)||(32521623-32521724)
chr2 (30-127)||(38873620-38873717)
chr2 (30-97)||(33940845-33940912)
chr2 (50-131)||(6164032-6164113)
chr2 (66-131)||(25318450-25318515)
chr2 (56-131)||(35697013-35697088)
[»] scaffold0170 (1 HSPs)
scaffold0170 (30-131)||(8676-8777)
[»] scaffold0167 (1 HSPs)
scaffold0167 (30-131)||(4521-4622)
[»] chr8 (26 HSPs)
chr8 (30-131)||(13154387-13154488)
chr8 (30-131)||(24332410-24332511)
chr8 (38-131)||(31403047-31403140)
chr8 (31-134)||(27993408-27993511)
chr8 (31-134)||(28050710-28050813)
chr8 (33-131)||(31186524-31186622)
chr8 (30-131)||(3272868-3272969)
chr8 (30-131)||(18764419-18764520)
chr8 (31-130)||(36449102-36449201)
chr8 (33-131)||(6891929-6892027)
chr8 (30-131)||(6943805-6943906)
chr8 (30-131)||(13405596-13405697)
chr8 (30-111)||(26479448-26479529)
chr8 (31-111)||(2835274-2835354)
chr8 (30-122)||(31685818-31685910)
chr8 (30-131)||(9180193-9180294)
chr8 (30-131)||(37586152-37586252)
chr8 (52-137)||(30256773-30256859)
chr8 (30-131)||(220660-220761)
chr8 (30-131)||(689815-689916)
chr8 (30-131)||(734283-734384)
chr8 (30-131)||(858179-858280)
chr8 (52-131)||(20764707-20764785)
chr8 (40-130)||(28004003-28004093)
chr8 (40-130)||(28061305-28061395)
chr8 (50-102)||(6834584-6834636)
[»] chr7 (17 HSPs)
chr7 (30-131)||(42517015-42517116)
chr7 (30-137)||(19157841-19157948)
chr7 (30-137)||(20757240-20757347)
chr7 (30-131)||(24490-24591)
chr7 (33-131)||(31579565-31579663)
chr7 (33-131)||(35026595-35026693)
chr7 (38-131)||(19476550-19476643)
chr7 (30-131)||(34487290-34487391)
chr7 (30-131)||(44219428-44219529)
chr7 (50-134)||(22364784-22364867)
chr7 (33-131)||(40729214-40729312)
chr7 (30-131)||(34595453-34595554)
chr7 (39-131)||(22954474-22954566)
chr7 (50-131)||(23177215-23177296)
chr7 (50-134)||(23190529-23190614)
chr7 (71-131)||(38616241-38616301)
chr7 (30-131)||(44483378-44483475)
[»] chr5 (16 HSPs)
chr5 (30-131)||(6497340-6497441)
chr5 (30-131)||(5933259-5933360)
chr5 (30-131)||(10461479-10461580)
chr5 (30-131)||(14868821-14868922)
chr5 (30-131)||(24490977-24491078)
chr5 (30-131)||(29991250-29991351)
chr5 (30-131)||(41137289-41137390)
chr5 (33-131)||(18786115-18786213)
chr5 (30-131)||(7133273-7133374)
chr5 (40-124)||(22394265-22394349)
chr5 (53-131)||(25329231-25329309)
chr5 (30-131)||(3598561-3598662)
chr5 (30-131)||(4122711-4122812)
chr5 (33-131)||(43197035-43197133)
chr5 (33-104)||(40588811-40588882)
chr5 (50-134)||(16415996-16416080)
[»] chr4 (22 HSPs)
chr4 (30-131)||(11021821-11021922)
chr4 (30-131)||(22487368-22487469)
chr4 (30-123)||(43750095-43750188)
chr4 (30-131)||(46481065-46481166)
chr4 (30-122)||(5721100-5721192)
chr4 (30-129)||(17107580-17107679)
chr4 (30-131)||(989209-989310)
chr4 (30-131)||(12792706-12792807)
chr4 (30-131)||(13683152-13683253)
chr4 (30-131)||(16959898-16959999)
chr4 (30-131)||(37815489-37815590)
chr4 (38-131)||(17865132-17865225)
chr4 (30-131)||(4712326-4712427)
chr4 (30-131)||(16491795-16491896)
chr4 (50-131)||(32592877-32592958)
chr4 (30-131)||(39385295-39385396)
chr4 (30-124)||(26314616-26314710)
chr4 (50-131)||(9301704-9301784)
chr4 (30-131)||(13493018-13493119)
chr4 (30-107)||(46081532-46081609)
chr4 (50-132)||(1106420-1106502)
chr4 (30-131)||(2184528-2184629)
[»] chr3 (19 HSPs)
chr3 (30-131)||(29838428-29838529)
chr3 (30-131)||(38807686-38807787)
chr3 (30-131)||(52835693-52835794)
chr3 (30-121)||(16056496-16056587)
chr3 (30-124)||(32315517-32315611)
chr3 (30-131)||(50645620-50645721)
chr3 (30-131)||(55092355-55092456)
chr3 (30-137)||(46962710-46962817)
chr3 (30-131)||(26582746-26582847)
chr3 (30-131)||(27934599-27934700)
chr3 (30-131)||(33162454-33162555)
chr3 (30-131)||(42093529-42093630)
chr3 (30-131)||(49121864-49121965)
chr3 (30-131)||(49499991-49500092)
chr3 (30-131)||(14545970-14546071)
chr3 (30-131)||(17109985-17110086)
chr3 (50-131)||(27285137-27285218)
chr3 (30-129)||(7029533-7029632)
chr3 (68-131)||(889262-889325)
[»] chr1 (18 HSPs)
chr1 (38-131)||(10913930-10914023)
chr1 (30-131)||(26244697-26244798)
chr1 (30-137)||(50624914-50625021)
chr1 (30-131)||(14602158-14602259)
chr1 (30-131)||(20061932-20062033)
chr1 (38-131)||(33619030-33619123)
chr1 (38-131)||(37172382-37172475)
chr1 (30-131)||(43191790-43191891)
chr1 (30-131)||(50096281-50096382)
chr1 (38-131)||(33713-33806)
chr1 (30-131)||(28031795-28031896)
chr1 (50-134)||(7337068-7337152)
chr1 (30-124)||(39288295-39288389)
chr1 (38-131)||(42154906-42154999)
chr1 (56-134)||(44561710-44561788)
chr1 (50-130)||(29584561-29584641)
chr1 (53-132)||(13440708-13440786)
chr1 (52-131)||(20382149-20382227)
[»] scaffold0137 (1 HSPs)
scaffold0137 (30-131)||(36899-37000)
[»] scaffold0006 (2 HSPs)
scaffold0006 (30-131)||(212546-212647)
scaffold0006 (52-131)||(186660-186738)
[»] chr6 (17 HSPs)
chr6 (30-131)||(8926335-8926436)
chr6 (30-131)||(30609000-30609101)
chr6 (30-122)||(29819534-29819626)
chr6 (30-131)||(5404718-5404819)
chr6 (30-131)||(8936592-8936693)
chr6 (30-131)||(17238182-17238283)
chr6 (30-131)||(19661483-19661584)
chr6 (30-131)||(31717323-31717424)
chr6 (52-131)||(16525363-16525442)
chr6 (30-108)||(3484932-3485010)
chr6 (50-132)||(4601121-4601203)
chr6 (30-131)||(3345154-3345254)
chr6 (30-131)||(5923975-5924076)
chr6 (30-131)||(28853633-28853734)
chr6 (30-131)||(33783531-33783632)
chr6 (72-131)||(18502732-18502791)
chr6 (75-131)||(26272173-26272229)
[»] scaffold0103 (1 HSPs)
scaffold0103 (41-131)||(43411-43501)
[»] scaffold0126 (1 HSPs)
scaffold0126 (33-131)||(36128-36226)
[»] scaffold0036 (1 HSPs)
scaffold0036 (54-134)||(11202-11282)
[»] scaffold0147 (1 HSPs)
scaffold0147 (66-131)||(25295-25360)
[»] scaffold0021 (1 HSPs)
scaffold0021 (30-108)||(118176-118253)
[»] scaffold0069 (1 HSPs)
scaffold0069 (52-131)||(61938-62016)
[»] scaffold0028 (1 HSPs)
scaffold0028 (38-131)||(74071-74163)
[»] scaffold0238 (1 HSPs)
scaffold0238 (52-132)||(22862-22941)


Alignment Details
Target: chr2 (Bit Score: 330; Significance: 0; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 5 - 404
Target Start/End: Complemental strand, 31420888 - 31420487
Alignment:
Q  5 atttagtaacatagaatagttcaatttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaa 104  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||  ||| ||||||||||||||||||||    
T  31420888 atttagtaacatagaatagttcaatttgaaatcggtctctttaaaattcattttagttcttattttgagggactgtaatcaaatattttacatgttacaa 31420789  T
Q  105 ggactaattccaatatgaataaattttgcagggttgtnnnnnnnn-tatttcagagactaaaaaacaaataaataatacattcttaaggaccaaaaccat 203  Q
    |||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31420788 ggactaattccaatatgaataaattttgcagggttgtaaaaaaaaatatttcagagactaaaaaacaaataaataatacattcttaaggaccaaaaccat 31420689  T
Q  204 ataatttaaacctatatcgttaaaaattgaacaatcacactccaagagcataaatgttccaaaacgggtttctttctaagaaatagacgag-aataagct 302  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31420688 ataatttaaacctatatcgttaaaaattgcacaatcacactccaagagcataaatgttccaaaacgggtttctttctaagaaatagacgagaaataagct 31420589  T
Q  303 cctcatcaattggttcatagcaaactcaaccttcaattgaagtgataagagaactgttgaattaaacttgagaatggaatattggagattaatacggtta 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31420588 cctcatcaattggttcatagcaaactcaaccttcaattgaagtgataagagaactgttcaattaaacttgagaatggaatattggagattaatacggtta 31420489  T
Q  403 tg 404  Q
    ||    
T  31420488 tg 31420487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 17457953 - 17457852
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| ||||||||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  17457953 ttgaaattggtccctataatattcattttagtccttattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaattaatt 17457854  T
Q  130 tt 131  Q
    ||    
T  17457853 tt 17457852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 18369240 - 18369147
Alignment:
Q  38 ggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    ||||||| ||| |||||||||| ||||||||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||||    
T  18369240 ggtccctataatattcattttagtccttattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatttt 18369147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 42705100 - 42705201
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  42705100 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 42705199  T
Q  130 tt 131  Q
    ||    
T  42705200 tt 42705201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 3371450 - 3371551
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| ||||||| || || |||||||||||| ||||    
T  3371450 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaagaaccaaatccaatatgaatcaatt 3371549  T
Q  130 tt 131  Q
    ||    
T  3371550 tt 3371551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 4171673 - 4171774
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||| ||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  4171673 ttgaaattggtccctataatattcattttagtcctcattttgagagactaaaatcaaatattctacatattacaaggaccaaatccaatatgaattaatt 4171772  T
Q  130 tt 131  Q
    ||    
T  4171773 tt 4171774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 12806697 - 12806798
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||| ||| || |||||||||||| ||||    
T  12806697 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaatgaccaaatccaatatgaatcaatt 12806796  T
Q  130 tt 131  Q
    ||    
T  12806797 tt 12806798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 29683333 - 29683423
Alignment:
Q  41 ccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||| ||| |||||||||| |||| |||||||||||||||||| ||||||||||||| |||||||||| || |||||||| ||| ||||||    
T  29683333 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattttacatattacaaggaccaaatccaatataaatcaatttt 29683423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 33 - 131
Target Start/End: Complemental strand, 41594183 - 41594085
Alignment:
Q  33 aaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||| ||| ||||||    
T  41594183 aaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatataaatcaatttt 41594085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 6880208 - 6880107
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||  ||| |||||||||| |||| ||||||||||| |||||| ||||||| ||||| ||| |||||| || |||||||||||||||||    
T  6880208 ttgaaattggtccccataatattcattttagtcctcattttgagggattaaaatcaaatattctacatattataaggaccaaatccaatatgaataaatt 6880109  T
Q  130 tt 131  Q
    ||    
T  6880108 tt 6880107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 13572639 - 13572720
Alignment:
Q  50 attcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||||    
T  13572639 attcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatttt 13572720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 14379348 - 14379247
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| ||||  ||||||||||||||||| ||||||| ||||| |||||| ||| || |||||||||||| ||||    
T  14379348 ttgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaatgaccaaatccaatatgaatcaatt 14379249  T
Q  130 tt 131  Q
    ||    
T  14379248 tt 14379247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 30432810 - 30432729
Alignment:
Q  50 attcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||||    
T  30432810 attcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatttt 30432729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 37609171 - 37609090
Alignment:
Q  50 attcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||||    
T  37609171 attcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatttt 37609090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 2395325 - 2395406
Alignment:
Q  50 attcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    ||||||||||  ||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||||    
T  2395325 attcattttagccctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatttt 2395406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 10748729 - 10748628
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| |||| || ||| |||||||||| |||| ||||||| | |||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  10748729 ttgaaattggtctctataatattcattttagtcctcattttgatgaactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 10748630  T
Q  130 tt 131  Q
    ||    
T  10748629 tt 10748628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 28921361 - 28921442
Alignment:
Q  50 attcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||||||||| ||||  ||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||||    
T  28921361 attcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatttt 28921442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 7877548 - 7877458
Alignment:
Q  41 ccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||| ||| ||| |||||| |||| |||||||||||||||||| |||||||  |||| |||||||||| || |||||||||||| ||||||    
T  7877548 ccctataatatttattttagtcctcattttgagggactaaaatcaaatattcaacatattacaaggaccaaatccaatatgaatcaatttt 7877458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 19204740 - 19204818
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggac 108  Q
    ||||||| ||||||| ||| ||||||| || |||| |||||||||||||||||| ||||||| ||||| ||||||||||    
T  19204740 ttgaaattggtccctataatattcattctagtcctcattttgagggactaaaatcaaatattctacatattacaaggac 19204818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 3948579 - 3948498
Alignment:
Q  50 attcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||||||||| |||| ||||| |||| ||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||||    
T  3948579 attcattttagtcctcatttttagggtctaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatttt 3948498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 32521623 - 32521724
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||| | ||| |||||||||| || | |||||||||||||||||| ||||||| || ||  |||||||||||| | |||||||||| ||||    
T  32521623 ttgaaattggtccttataatattcattttagtcttcattttgagggactaaaatcaaatattctatatactacaaggactaaattcaatatgaatcaatt 32521722  T
Q  130 tt 131  Q
    ||    
T  32521723 tt 32521724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 127
Target Start/End: Original strand, 38873620 - 38873717
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaa 127  Q
    ||||||| ||||||| ||| |||||||||| ||||  |||| |||||||||||| ||||||| || || |||||||||| || |||||||| ||||||    
T  38873620 ttgaaattggtccctataatattcattttagtcctcgttttaagggactaaaatcaaatattctagatattacaaggaccaaatccaatataaataaa 38873717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 33940912 - 33940845
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacat 97  Q
    ||||||| ||||||| ||| |||||||||| || |||||||||||||||||||| ||||||| |||||    
T  33940912 ttgaaattggtccctataatattcattttagtctttattttgagggactaaaatcaaatattctacat 33940845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 6164113 - 6164032
Alignment:
Q  50 attcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||||||||| ||||  ||||||||||||||||| ||||||| ||||| ||||||| || || | |||||||||| ||||||    
T  6164113 attcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaagaaccaaattcaatatgaatcaatttt 6164032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 25318515 - 25318450
Alignment:
Q  66 attttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    ||||| |||||||||||| ||||||||||||| |||||||||| || | |||||||||| ||||||    
T  25318515 attttaagggactaaaatcaaatattttacatattacaaggaccaaattcaatatgaatcaatttt 25318450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 35697013 - 35697088
Alignment:
Q  56 tttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||| ||||||||||||||||||||||| | ||| | ||||| || ||| ||| ||||  ||||||||||||||||    
T  35697013 tttagtccttattttgagggactaaaattagataatctacatatttcaatgaccaattttaatatgaataaatttt 35697088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 8777 - 8676
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| |||||||  || |||||||||| |||| |||||||||||||||||| ||||||| ||||| ||||||||||||| |||||||||||| ||||    
T  8777 ttgaaattggtccctaaaatattcattttaatcctcattttgagggactaaaatcaaatattctacatattacaaggactaaatccaatatgaatcaatt 8678  T
Q  130 tt 131  Q
    ||    
T  8677 tt 8676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 4622 - 4521
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  4622 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 4523  T
Q  130 tt 131  Q
    ||    
T  4522 tt 4521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 13154387 - 13154488
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  13154387 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 13154486  T
Q  130 tt 131  Q
    ||    
T  13154487 tt 13154488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 24332410 - 24332511
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || | |||||||||| ||||    
T  24332410 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaattcaatatgaatcaatt 24332509  T
Q  130 tt 131  Q
    ||    
T  24332510 tt 24332511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 31403140 - 31403047
Alignment:
Q  38 ggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||||    
T  31403140 ggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatttt 31403047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 27993511 - 27993408
Alignment:
Q  31 tgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaattt 130  Q
    |||||| ||||||| ||| ||| |||||| | ||||||||||||||||||||| ||||||| |||||||||||||||| || |||||| |||| | ||||    
T  27993511 tgaaattggtccctataatatttattttagttcttattttgagggactaaaatcaaatattctacatgttacaaggaccaaatccaatgtgaaaacattt 27993412  T
Q  131 tgca 134  Q
    ||||    
T  27993411 tgca 27993408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 28050813 - 28050710
Alignment:
Q  31 tgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaattt 130  Q
    |||||| ||||||| ||| ||| |||||| | ||||||||||||||||||||| ||||||| |||||||||||||||| || |||||| |||| | ||||    
T  28050813 tgaaattggtccctataatatttattttagttcttattttgagggactaaaatcaaatattctacatgttacaaggaccaaatccaatgtgaaaacattt 28050714  T
Q  131 tgca 134  Q
    ||||    
T  28050713 tgca 28050710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 33 - 131
Target Start/End: Original strand, 31186524 - 31186622
Alignment:
Q  33 aaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||||||||| | ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| ||| |||||| || |||||||||||| ||||||    
T  31186524 aaatcggtccttataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattataaggaccaaatccaatatgaatcaatttt 31186622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 3272868 - 3272969
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| ||||||||||| |||||| ||||||| ||||| |||||| ||| || |||||||||||| ||||    
T  3272868 ttgaaattggtccctataatattcattttagtcctcattttgagggattaaaatcaaatattctacatattacaaagaccaaatccaatatgaatcaatt 3272967  T
Q  130 tt 131  Q
    ||    
T  3272968 tt 3272969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 18764520 - 18764419
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||||||||||| || || | ||||||| |||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  18764520 ttgaaattggtccctataaaattcattatagtcgtcattttgaaggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 18764421  T
Q  130 tt 131  Q
    ||    
T  18764420 tt 18764419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 36449201 - 36449102
Alignment:
Q  31 tgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaattt 130  Q
    |||||| |||||||  || |||||||||| ||||||||||| ||||||||||| |||| || || || |||||||||| |||||||||| ||||||||||    
T  36449201 tgaaattggtccctacaatattcattttagtccttattttgtgggactaaaatcaaatgttctatattttacaaggaccaattccaatacgaataaattt 36449102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 131
Target Start/End: Original strand, 6891929 - 6892027
Alignment:
Q  33 aaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||| ||||||| ||| ||| |||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || || ||||||||| ||||||    
T  6891929 aaattggtccctataatatttattttagtcctcattttgagggactaaaattaaatattctacatattacaaggaccaaatcgaatatgaatcaatttt 6892027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 6943805 - 6943906
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    |||||||  |||||| ||| |||||||||| |||| ||||||| |||||||||| ||||||| || || |||||||||| || |||||||||||| ||||    
T  6943805 ttgaaattagtccctataatattcattttagtcctcattttgaaggactaaaatcaaatattctatatattacaaggaccaaatccaatatgaatcaatt 6943904  T
Q  130 tt 131  Q
    ||    
T  6943905 tt 6943906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 13405596 - 13405697
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||| | ||| |||||||||| |||| ||||  |||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  13405596 ttgaaattggtccttataatattcattttagtcctcatttcaagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 13405695  T
Q  130 tt 131  Q
    ||    
T  13405696 tt 13405697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 111
Target Start/End: Complemental strand, 26479529 - 26479448
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaa 111  Q
    |||||||  |||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||||||    
T  26479529 ttgaaattagtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggactaa 26479448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 2835274 - 2835354
Alignment:
Q  31 tgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaa 111  Q
    |||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| | ||| |||||||||||||    
T  2835274 tgaaattggtccctataatattcattttaatcctcattttgagggactaaaatcaaatattatgcatattacaaggactaa 2835354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 31685818 - 31685910
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatga 122  Q
    ||||||| ||||||| ||| |||||||||| ||||  ||||||||||||||||| ||||||| ||||| |||||| ||| || ||||||||||    
T  31685818 ttgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaagaccaaatccaatatga 31685910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 9180193 - 9180294
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| ||||  ||||||||||||||||| ||||||| ||| | ||| |||||| || |||||| ||||| ||||    
T  9180193 ttgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacgtattataaggaccaaatccaatctgaatcaatt 9180292  T
Q  130 tt 131  Q
    ||    
T  9180293 tt 9180294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 37586252 - 37586152
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||| | ||| |||||||||| || | |||||||||||||||||| ||||||| || || |||||||||| || | |||||||||||||||    
T  37586252 ttgaaattggtccatataatattcattttagtcttcattttgagggactaaaatcaaatattctaaatattacaaggaccaaat-caatatgaataaatt 37586154  T
Q  130 tt 131  Q
    ||    
T  37586153 tt 37586152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 30256773 - 30256859
Alignment:
Q  52 tcattttattccttattttgaggg-actaaaataaaatattttacatgttacaaggactaattccaatatgaataaattttgcaggg 137  Q
    |||||||| || ||| |||||||| |||||||| ||||||||||||||||||||  || |||| |||||| || |||||||||||||    
T  30256773 tcattttagtctttactttgaggggactaaaatcaaatattttacatgttacaaacaccaatttcaatatcaacaaattttgcaggg 30256859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 220660 - 220761
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| |||| || ||| |||||||||| |||| ||||| | ||| |||||| ||||||| ||||| |||||| ||| || |||||||||||| ||||    
T  220660 ttgaaattggtcactataatattcattttaatcctcattttaaaggattaaaatcaaatattctacatattacaaagaccaaatccaatatgaatcaatt 220759  T
Q  130 tt 131  Q
    ||    
T  220760 tt 220761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 689815 - 689916
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| |||| || ||| |||||||||| |||| ||||| | ||| |||||| ||||||| ||||| |||||| ||| || |||||||||||| ||||    
T  689815 ttgaaattggtcactataatattcattttaatcctcattttaaaggattaaaatcaaatattctacatattacaaagaccaaatccaatatgaatcaatt 689914  T
Q  130 tt 131  Q
    ||    
T  689915 tt 689916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 734283 - 734384
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| |||| || ||| |||||||||| |||| ||||| | ||| |||||| ||||||| ||||| |||||| ||| || |||||||||||| ||||    
T  734283 ttgaaattggtcactataatattcattttaatcctcattttaaaggattaaaatcaaatattctacatattacaaagaccaaatccaatatgaatcaatt 734382  T
Q  130 tt 131  Q
    ||    
T  734383 tt 734384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 858179 - 858280
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| |||| || ||| |||||||||| |||| ||||| | ||| |||||| ||||||| ||||| |||||| ||| || |||||||||||| ||||    
T  858179 ttgaaattggtcactataatattcattttaatcctcattttaaaggattaaaatcaaatattctacatattacaaagaccaaatccaatatgaatcaatt 858278  T
Q  130 tt 131  Q
    ||    
T  858279 tt 858280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 131
Target Start/End: Complemental strand, 20764785 - 20764707
Alignment:
Q  52 tcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||||||| |||||||||||||||  |||||| ||||| || |||| ||| |||||||||||  ||||| ||||||||||    
T  20764785 tcattttagtccttattttgagggt-taaaatcaaatacttgacatattataaggactaattttaatataaataaatttt 20764707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 28004093 - 28004003
Alignment:
Q  40 tccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaattt 130  Q
    ||||||||| ||||||||||  |||||| |||| | |||||||| ||||||||||||| ||  | ||   ||||| |||||||||||||||    
T  28004093 tccctttaatattcattttaacccttatcttgatgtactaaaatcaaatattttacatatttgaggggacaattctaatatgaataaattt 28004003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 28061395 - 28061305
Alignment:
Q  40 tccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaattt 130  Q
    ||||||||| ||||||||||  |||||| |||| | |||||||| ||||||||||||| ||  | ||   ||||| |||||||||||||||    
T  28061395 tccctttaatattcattttaacccttatcttgatgtactaaaatcaaatattttacatatttgaggggacaattctaatatgaataaattt 28061305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 6834584 - 6834636
Alignment:
Q  50 attcattttattccttattttgagggactaaaataaaatattttacatgttac 102  Q
    |||||||||| || ||| ||||||||| |||||||||||||| ||||| ||||    
T  6834584 attcattttagtctttaatttgagggattaaaataaaatattctacatattac 6834636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 3e-24; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 42517015 - 42517116
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  42517015 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 42517114  T
Q  130 tt 131  Q
    ||    
T  42517115 tt 42517116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 137
Target Start/End: Original strand, 19157841 - 19157948
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| ||||||||||  | |||||||||||| ||||    
T  19157841 ttgaaattggtccctgtaatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccgaatccaatatgaatcaatt 19157940  T
Q  130 ttgcaggg 137  Q
    || |||||    
T  19157941 ttacaggg 19157948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 137
Target Start/End: Original strand, 20757240 - 20757347
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| ||||||||||  | |||||||||||| ||||    
T  20757240 ttgaaattggtccctgtaatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccgaatccaatatgaatcaatt 20757339  T
Q  130 ttgcaggg 137  Q
    || |||||    
T  20757340 ttacaggg 20757347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 24591 - 24490
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| ||||  ||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  24591 ttgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 24492  T
Q  130 tt 131  Q
    ||    
T  24491 tt 24490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 33 - 131
Target Start/End: Complemental strand, 31579663 - 31579565
Alignment:
Q  33 aaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||| ||||||| ||| |||||||||| |||| ||||||||| |||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||||    
T  31579663 aaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatttt 31579565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 33 - 131
Target Start/End: Original strand, 35026595 - 35026693
Alignment:
Q  33 aaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||| ||||||| ||| |||||||||| ||||  |||||| |||||||||| ||||||||||||| |||||||||| || |||||||||||| ||||||    
T  35026595 aaattggtccctataatattcattttagtcctcgttttgaaggactaaaatcaaatattttacatattacaaggaccaaatccaatatgaatcaatttt 35026693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 19476550 - 19476643
Alignment:
Q  38 ggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    ||||||| ||| |||||||||| | || |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||||    
T  19476550 ggtccctataatattcattttagtactcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatttt 19476643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 34487290 - 34487391
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| |||| || ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||| ||| || |||||||||||| ||||    
T  34487290 ttgaaattggtctctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaatgaccaaatccaatatgaatcaatt 34487389  T
Q  130 tt 131  Q
    ||    
T  34487390 tt 34487391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 44219529 - 44219428
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||  |||||||||| ||||  ||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  44219529 ttgaaattggtccctctagtattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 44219430  T
Q  130 tt 131  Q
    ||    
T  44219429 tt 44219428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 22364867 - 22364784
Alignment:
Q  50 attcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaattttgca 134  Q
    |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| |||||||||    
T  22364867 attcattttagtcct-attttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaattttgca 22364784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 131
Target Start/End: Original strand, 40729214 - 40729312
Alignment:
Q  33 aaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||| ||||||| ||| |||||||||| | || |||||||||||||||||| ||||||| ||||| |||||||||| || || ||||||||| ||||||    
T  40729214 aaattggtccctataatattcattttagttctcattttgagggactaaaattaaatattctacatattacaaggaccaaatcgaatatgaatcaatttt 40729312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 34595554 - 34595453
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||| | |||| |||||||||||||||| | ||||||| ||||| |||||||||| || || ||||||||| ||||    
T  34595554 ttgaaattggtccctataatattcatttcagtcctcattttgagggactaaattcaaatattctacatattacaaggaccaaatctaatatgaatcaatt 34595455  T
Q  130 tt 131  Q
    ||    
T  34595454 tt 34595453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 131
Target Start/End: Complemental strand, 22954566 - 22954474
Alignment:
Q  39 gtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||||| ||| |||||||||| |||| |||||||||||||| ||| ||||||| ||||| |||||||||| || | |||||||||| ||||||    
T  22954566 gtccctataatattcattttaatcctcattttgagggactagaatcaaatattctacatattacaaggaccaaattcaatatgaatcaatttt 22954474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 23177215 - 23177296
Alignment:
Q  50 attcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||||||||| |||||||||| ||||| |||||| ||||||| ||||| |||||| ||| || |||||||||||| ||||||    
T  23177215 attcattttagtccttattttaagggattaaaatcaaatattctacatattacaatgaccaaatccaatatgaatcaatttt 23177296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 23190529 - 23190614
Alignment:
Q  50 attcattttattccttattttga-gggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaattttgca 134  Q
    |||||||||| |||||||||| | |||| |||||| ||||||||||||| |||||| ||| || |||||||| ||| |||||||||    
T  23190529 attcattttagtccttatttttaagggattaaaatcaaatattttacatattacaatgaccaaatccaatataaatcaattttgca 23190614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 38616241 - 38616301
Alignment:
Q  71 gagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    ||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| |||||||    
T  38616241 gagggactaaaataagatattttacatgttataagtactagttctaatatgaacaaatttt 38616301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 44483378 - 44483475
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    |||||||  |||||| ||| |||||||||| |||| |||||||| ||| ||||| ||||||| ||    |||||||||| || |||||||||||| ||||    
T  44483378 ttgaaattagtccctataatattcattttagtcctcattttgagagaccaaaatcaaatattcta----ttacaaggaccaaatccaatatgaatcaatt 44483473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 6497340 - 6497441
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  6497340 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaattaatt 6497439  T
Q  130 tt 131  Q
    ||    
T  6497440 tt 6497441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 5933360 - 5933259
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||||||||||| ||| |||||||||| |||| |||||||  ||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  5933360 ttgaaatcggtccctataatattcattttagtcctcattttgaatgactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 5933261  T
Q  130 tt 131  Q
    ||    
T  5933260 tt 5933259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 10461580 - 10461479
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||| ||| ||||    
T  10461580 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatataaatcaatt 10461481  T
Q  130 tt 131  Q
    ||    
T  10461480 tt 10461479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 14868821 - 14868922
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| ||| |||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  14868821 ttgaaattggtccctataatatttattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 14868920  T
Q  130 tt 131  Q
    ||    
T  14868921 tt 14868922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 24491078 - 24490977
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||  |||||||||| || |||||||||||| ||||    
T  24491078 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacacattacaaggaccaaatccaatatgaatcaatt 24490979  T
Q  130 tt 131  Q
    ||    
T  24490978 tt 24490977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 29991250 - 29991351
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| ||||| |||||||||||| ||||||| |||||  ||||||||| ||||||||||||||| ||||    
T  29991250 ttgaaattggtccctataatattcattttagtcctcattttaagggactaaaatcaaatattctacatactacaaggaccaattccaatatgaatcaatt 29991349  T
Q  130 tt 131  Q
    ||    
T  29991350 tt 29991351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 41137289 - 41137390
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||||||||||| ||| |||||||||| |||| |||||| ||||||||||| ||||||| ||||| ||||||| || || |||||||||||| ||||    
T  41137289 ttgaaatcggtccctataatattcattttagtcctcattttgggggactaaaatcaaatattctacatattacaagaaccaaatccaatatgaatcaatt 41137388  T
Q  130 tt 131  Q
    ||    
T  41137389 tt 41137390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 33 - 131
Target Start/End: Complemental strand, 18786213 - 18786115
Alignment:
Q  33 aaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||| ||||||| ||| |||||||||| |||| |||||||||||||||||| |||||||  |||| |||||||||| || |||||||||||| ||||||    
T  18786213 aaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaatttt 18786115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 7133273 - 7133374
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| | ||||| ||| |||||||||| |||| ||||||||||| |||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  7133273 ttgaaattgatccctataatattcattttagtcctcattttgagggagtaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 7133372  T
Q  130 tt 131  Q
    ||    
T  7133373 tt 7133374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 22394349 - 22394265
Alignment:
Q  40 tccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaat 124  Q
    ||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || ||||||||||||    
T  22394349 tccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 22394265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 53 - 131
Target Start/End: Complemental strand, 25329309 - 25329231
Alignment:
Q  53 cattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    ||||||| |||| |||||||||||||||||| ||||||||||||| |||||||||  || |||||||||||| ||||||    
T  25329309 cattttagtcctcattttgagggactaaaattaaatattttacatattacaaggatcaaatccaatatgaatcaatttt 25329231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 3598561 - 3598662
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||| ||||| |||| |||||||||||||||||| ||||||| ||| | |||||||||  || |||||||||||| ||||    
T  3598561 ttgaaattggtccctataatattctttttagtcctcattttgagggactaaaatcaaatattctacgtattacaaggatcaaatccaatatgaatcaatt 3598660  T
Q  130 tt 131  Q
    ||    
T  3598661 tt 3598662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 4122812 - 4122711
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| || |||| ||| |||||||||| |||| ||||| |||| ||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  4122812 ttgaaattggcccctataatattcattttagtcctcatttttagggtctaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 4122713  T
Q  130 tt 131  Q
    ||    
T  4122712 tt 4122711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 131
Target Start/End: Complemental strand, 43197133 - 43197035
Alignment:
Q  33 aaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||| ||||||| ||| ||| |||||| |||| |||||||||||||||||| ||||||| || || |||||| ||| || || ||||||||| ||||||    
T  43197133 aaattggtccctataatatttattttagtcctcattttgagggactaaaattaaatattctatatattacaaagaccaaatcgaatatgaatcaatttt 43197035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 40588882 - 40588811
Alignment:
Q  33 aaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaa 104  Q
    |||| |||| || ||| ||||| |||| |||| |||||||||||||||||||||||||| ||| | ||||||    
T  40588882 aaattggtctctataatattcactttagtcctcattttgagggactaaaataaaatattctacgtattacaa 40588811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 16416080 - 16415996
Alignment:
Q  50 attcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaattttgca 134  Q
    |||||||||| ||||||||||| ||||  ||||| ||||||| ||| | |||||| ||| || |||||||| |||  ||||||||    
T  16416080 attcattttaatccttattttgtgggatcaaaatcaaatattctacctattacaatgaccaaatccaatataaatccattttgca 16415996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 3e-24; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 11021821 - 11021922
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  11021821 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 11021920  T
Q  130 tt 131  Q
    ||    
T  11021921 tt 11021922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 22487368 - 22487469
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  22487368 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 22487467  T
Q  130 tt 131  Q
    ||    
T  22487468 tt 22487469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 43750095 - 43750188
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaa 123  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||||||||||| ||||| |||||||||| || |||||||||||    
T  43750095 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaataaaatattctacatattacaaggaccaaatccaatatgaa 43750188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 46481065 - 46481166
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  46481065 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 46481164  T
Q  130 tt 131  Q
    ||    
T  46481165 tt 46481166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 5721100 - 5721192
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatga 122  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||||||||||| ||||| |||||||||| || ||||||||||    
T  5721100 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaataaaatattctacatattacaaggaccaaatccaatatga 5721192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 129
Target Start/End: Original strand, 17107580 - 17107679
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  17107580 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 17107679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 989310 - 989209
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || | |||||||||| ||||    
T  989310 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaattcaatatgaatcaatt 989211  T
Q  130 tt 131  Q
    ||    
T  989210 tt 989209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 12792807 - 12792706
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| |||| || ||| |||||||||| |||| |||||||||||||||||| ||||||| |||||||||||||||| || || ||||||||| ||||    
T  12792807 ttgaaattggtcactataatattcattttagtcctcattttgagggactaaaatcaaatattctacatgttacaaggaccaaatctaatatgaatcaatt 12792708  T
Q  130 tt 131  Q
    ||    
T  12792707 tt 12792706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 13683152 - 13683253
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| ||| |||||| || |||||||||||| ||||    
T  13683152 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattataaggaccaaatccaatatgaatcaatt 13683251  T
Q  130 tt 131  Q
    ||    
T  13683252 tt 13683253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 16959999 - 16959898
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| ||||  ||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  16959999 ttgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 16959900  T
Q  130 tt 131  Q
    ||    
T  16959899 tt 16959898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 37815489 - 37815590
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| ||||||| |||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  37815489 ttgaaattggtccctataatattcattttagtcctcattttgaaggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 37815588  T
Q  130 tt 131  Q
    ||    
T  37815589 tt 37815590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 17865132 - 17865225
Alignment:
Q  38 ggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    ||||||| ||| |||||||||| ||||  ||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||||    
T  17865132 ggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatttt 17865225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 4712326 - 4712427
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| ||||  |||| || ||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  4712326 ttgaaattggtccctataatattcattttaatcctcgttttaagagactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 4712425  T
Q  130 tt 131  Q
    ||    
T  4712426 tt 4712427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 16491795 - 16491896
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| | | |||||||||| |||| ||||||||||| |||||| ||||||| ||||| ||||||| || || |||||||||||| ||||    
T  16491795 ttgaaattggtccctatgatattcattttagtcctcattttgagggattaaaatcaaatattctacatattacaagaaccaaatccaatatgaatcaatt 16491894  T
Q  130 tt 131  Q
    ||    
T  16491895 tt 16491896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 32592958 - 32592877
Alignment:
Q  50 attcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||||||||| |||| |||||||||||||||||| ||||||| || || |||||||||| || |||||||||||| ||||||    
T  32592958 attcattttagtcctcattttgagggactaaaatcaaatattctatatattacaaggaccaaatccaatatgaatcaatttt 32592877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 39385396 - 39385295
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| ||||||| |||||||||| ||||||| ||||| ||||||| |  || |||||||||||| ||||    
T  39385396 ttgaaattggtccctataatattcattttagtcctcattttgaaggactaaaatcaaatattctacatattacaagtatcaaatccaatatgaatcaatt 39385297  T
Q  130 tt 131  Q
    ||    
T  39385296 tt 39385295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 26314710 - 26314616
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaat 124  Q
    ||||||| ||||| | ||| |||||||||| | || |||||||||||||||||| ||||||| |||||  ||||||||| || ||||||||||||    
T  26314710 ttgaaattggtccatataatattcattttagttctcattttgagggactaaaatcaaatattctacatactacaaggaccaaatccaatatgaat 26314616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 9301784 - 9301704
Alignment:
Q  50 attcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||||||||| |||| ||||||||| |||||||||||||||| ||||| |||||| ||| || |||||||||||| ||||||    
T  9301784 attcattttagtcctcattttgagg-actaaaataaaatattctacatattacaatgaccaaatccaatatgaattaatttt 9301704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 13493119 - 13493018
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| |||  | |||| || |||| |||||||||||||||||| ||||||| ||||| ||||||| || || |||||||||||| ||||    
T  13493119 ttgaaattggtccctataatgtacattgtagtcctcattttgagggactaaaatcaaatattctacatattacaagaaccaaatccaatatgaatcaatt 13493020  T
Q  130 tt 131  Q
    ||    
T  13493019 tt 13493018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 46081609 - 46081532
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaagga 107  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| || ||||||    
T  46081609 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattgcaagga 46081532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 50 - 132
Target Start/End: Complemental strand, 1106502 - 1106420
Alignment:
Q  50 attcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaattttg 132  Q
    ||||||||||||| ||||||| || ||||||||| ||||||| ||||| |||||| |||  | |||||||||||| |||||||    
T  1106502 attcattttattcattattttaagagactaaaatcaaatattctacatattacaaagaccgaatccaatatgaatcaattttg 1106420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 2184629 - 2184528
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||| | ||| |||||||||| |||| || ||||||| ||||||| ||||||| |||||  |||||| || || |||||||||||| ||||    
T  2184629 ttgaaattggtccatataatattcattttagtcctcatattgagggtctaaaatcaaatattctacatactacaagaacaaaatccaatatgaatcaatt 2184530  T
Q  130 tt 131  Q
    ||    
T  2184529 tt 2184528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 29838529 - 29838428
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| ||||  ||||||||||||||||| ||||||| ||||| ||||||||||||| |||||||||||| ||||    
T  29838529 ttgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggactaaatccaatatgaatcaatt 29838430  T
Q  130 tt 131  Q
    ||    
T  29838429 tt 29838428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 38807686 - 38807787
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||| ||||| ||||||||||||| |||||||||| || |||||||||||| ||||    
T  38807686 ttgaaattggtccctataatattcattttagtcctcattttgagggacaaaaatcaaatattttacatattacaaggaccaaatccaatatgaatcaatt 38807785  T
Q  130 tt 131  Q
    ||    
T  38807786 tt 38807787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 52835693 - 52835794
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  52835693 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 52835792  T
Q  130 tt 131  Q
    ||    
T  52835793 tt 52835794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 16056496 - 16056587
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatg 121  Q
    ||||||| ||||||| ||| |||||||||| ||||||||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||    
T  16056496 ttgaaattggtccctataatattcattttagtccttattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatg 16056587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 32315611 - 32315517
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaat 124  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || ||||||||||||    
T  32315611 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 32315517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 50645620 - 50645721
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| ||||  ||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  50645620 ttgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 50645719  T
Q  130 tt 131  Q
    ||    
T  50645720 tt 50645721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 55092355 - 55092456
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| |||| || ||| |||||||||| |||| |||||||||||||||||| ||||||| || || ||||||||||||| |||||||||||| ||||    
T  55092355 ttgaaattggtctctataatattcattttagtcctcattttgagggactaaaatcaaatattctatatattacaaggactaaatccaatatgaatcaatt 55092454  T
Q  130 tt 131  Q
    ||    
T  55092455 tt 55092456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 46962817 - 46962710
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| | ||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| ||||||| ||| | |||||||||||| ||||    
T  46962817 ttgaaattgatccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaagaactgaatccaatatgaatcaatt 46962718  T
Q  130 ttgcaggg 137  Q
    || |||||    
T  46962717 ttacaggg 46962710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 26582847 - 26582746
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| ||||||||||| |||||| ||||||| ||||| |||||| ||| || |||||||||||| ||||    
T  26582847 ttgaaattggtccctataatattcattttagtcctcattttgagggattaaaatcaaatattctacatattacaatgaccaaatccaatatgaatcaatt 26582748  T
Q  130 tt 131  Q
    ||    
T  26582747 tt 26582746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 27934599 - 27934700
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| ||||||||||  | |||||||| ||| ||||    
T  27934599 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccgaatccaatataaatcaatt 27934698  T
Q  130 tt 131  Q
    ||    
T  27934699 tt 27934700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 33162555 - 33162454
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||| | ||| |||||||||| |||| ||||||||||| |||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  33162555 ttgaaattggtccgtataatattcattttagtcctcattttgagggattaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 33162456  T
Q  130 tt 131  Q
    ||    
T  33162455 tt 33162454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 42093630 - 42093529
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||  ||| |||||||||| |||| |||||||||||||||||| ||||||| ||| | |||||||||| || |||||||||||| ||||    
T  42093630 ttgaaattggtcccaataatattcattttagtcctcattttgagggactaaaatcaaatattctacgtattacaaggaccaaatccaatatgaatcaatt 42093531  T
Q  130 tt 131  Q
    ||    
T  42093530 tt 42093529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 49121864 - 49121965
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| ||||| |||| |||| |||||||||||||||||| ||||||| ||||| ||| |||||| || |||||||||||| ||||    
T  49121864 ttgaaattggtccctataatattcactttagtcctcattttgagggactaaaatcaaatattctacatattataaggaccaaatccaatatgaatcaatt 49121963  T
Q  130 tt 131  Q
    ||    
T  49121964 tt 49121965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 49499991 - 49500092
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| ||||  ||||||||||||||||| ||||||| ||||| |||||||||| || |||||||| ||| ||||    
T  49499991 ttgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatataaatcaatt 49500090  T
Q  130 tt 131  Q
    ||    
T  49500091 tt 49500092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 14546071 - 14545970
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| | || |||||||||||||||||| ||||| | ||||| |||||| ||  || |||||||||||| ||||    
T  14546071 ttgaaattggtccctataatattcattttagttctcattttgagggactaaaatcaaatactctacatattacaaagatcaaatccaatatgaatcaatt 14545972  T
Q  130 tt 131  Q
    ||    
T  14545971 tt 14545970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 17110086 - 17109985
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| |||| || ||| |||||||||| |||| ||||| | || ||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  17110086 ttgaaattggtctctataatattcattttagtcctcatttttacggtctaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 17109987  T
Q  130 tt 131  Q
    ||    
T  17109986 tt 17109985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 27285137 - 27285218
Alignment:
Q  50 attcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||||||||| |||| ||||||||| |||||||| ||||||| || || ||| |||||| || |||||||||||| ||||||    
T  27285137 attcattttagtcctcattttgaggtactaaaatcaaatattctagatattataaggaccaaatccaatatgaatcaatttt 27285218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 129
Target Start/End: Original strand, 7029533 - 7029632
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| | ||||| ||| ||||| |||| |||| ||||||||  | |||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  7029533 ttgaaattgatccctataatattcaatttagtcctcattttgagaaattaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 7029632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 889325 - 889262
Alignment:
Q  68 tttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    ||||||| |||||||| ||||||| ||||| ||| |||||| || |||||||||||| ||||||    
T  889325 tttgaggcactaaaatcaaatattctacatattataaggaccaaatccaatatgaatcaatttt 889262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 10913930 - 10914023
Alignment:
Q  38 ggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| ||||||||||||||| ||||||    
T  10913930 ggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaattccaatatgaatcaatttt 10914023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 26244697 - 26244798
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  26244697 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaattaaatattctacatattacaaggaccaaatccaatatgaatcaatt 26244796  T
Q  130 tt 131  Q
    ||    
T  26244797 tt 26244798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 137
Target Start/End: Original strand, 50624914 - 50625021
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| ||||||||||  | |||||||||||| ||||    
T  50624914 ttgaaattggtccctgtaatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccgaatccaatatgaatcaatt 50625013  T
Q  130 ttgcaggg 137  Q
    || |||||    
T  50625014 ttacaggg 50625021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 14602158 - 14602259
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| || || |||||||||| || |||||||||||| ||||    
T  14602158 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctaaatattacaaggaccaaatccaatatgaatcaatt 14602257  T
Q  130 tt 131  Q
    ||    
T  14602258 tt 14602259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 20062033 - 20061932
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| || | |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  20062033 ttgaaattggtccctataatattcattttagtcatcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 20061934  T
Q  130 tt 131  Q
    ||    
T  20061933 tt 20061932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 33619123 - 33619030
Alignment:
Q  38 ggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||||    
T  33619123 ggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatttt 33619030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 37172475 - 37172382
Alignment:
Q  38 ggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||||    
T  37172475 ggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatttt 37172382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 43191891 - 43191790
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||| ||| || |||||||||||| ||||    
T  43191891 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaagaccaaatccaatatgaatcaatt 43191792  T
Q  130 tt 131  Q
    ||    
T  43191791 tt 43191790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 50096281 - 50096382
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || | |||||||||| ||||    
T  50096281 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaattcaatatgaatcaatt 50096380  T
Q  130 tt 131  Q
    ||    
T  50096381 tt 50096382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 33713 - 33806
Alignment:
Q  38 ggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    ||||||| ||| |||||||||| ||||  ||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||||    
T  33713 ggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggacaaaatccaatatgaatcaatttt 33806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 28031795 - 28031896
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||| | ||| |||||||||| |||| ||||||| |||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  28031795 ttgaaattggtccttataatattcattttagtcctcattttgaaggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 28031894  T
Q  130 tt 131  Q
    ||    
T  28031895 tt 28031896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 7337152 - 7337068
Alignment:
Q  50 attcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaattttgca 134  Q
    |||||||||| |  ||||||||||||| |||||| ||||||| |||||||||||||||| || |||||||| ||| |||||||||    
T  7337152 attcattttagtttttattttgagggattaaaatcaaatattatacatgttacaaggaccaaatccaatataaatcaattttgca 7337068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 39288389 - 39288295
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaat 124  Q
    ||||||| ||||||| ||| |||||||||| ||||  ||||||||||||||||| ||||||| ||| | |||||| ||| || ||||||||||||    
T  39288389 ttgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacctattacaaagaccaaatccaatatgaat 39288295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 42154906 - 42154999
Alignment:
Q  38 ggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    ||||||| ||| |||||||||| ||||  |||||||||| |||||| ||||||| || || |||||||||| || |||||||||||| ||||||    
T  42154906 ggtccctataatattcattttagtcctcgttttgagggattaaaatcaaatattctaaatattacaaggaccaaatccaatatgaatcaatttt 42154999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 56 - 134
Target Start/End: Original strand, 44561710 - 44561788
Alignment:
Q  56 tttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaattttgca 134  Q
    |||| |||||| |||||||||||||||| ||||| ||| ||| ||||||||||||| | |||| | |||||||||||||    
T  44561710 tttaatccttagtttgagggactaaaatcaaataattttcatattacaaggactaaattcaattttaataaattttgca 44561788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 29584561 - 29584641
Alignment:
Q  50 attcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaattt 130  Q
    |||||||||| |||||||||||||||||  ||||  |||||| ||||| ||||| | ||  |||||||||||||| |||||    
T  29584561 attcattttagtccttattttgagggacacaaatcgaatattctacatattacaggtacctattccaatatgaatgaattt 29584641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 13440708 - 13440786
Alignment:
Q  53 cattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaattttg 132  Q
    ||||||| |||||||||||||||  |||||| |||||| | |||| ||| |||||||||||  ||||| |||||||||||    
T  13440708 cattttagtccttattttgagggt-taaaatcaaatatatgacatattataaggactaattttaatataaataaattttg 13440786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 131
Target Start/End: Original strand, 20382149 - 20382227
Alignment:
Q  52 tcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||||||| |||||||||||||||  |||||| ||||| || |||| ||| |||||||||||  ||||| ||||||||||    
T  20382149 tcattttagtccttattttgagggt-taaaatcaaatacttgacatattataaggactaattttaatataaataaatttt 20382227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 37000 - 36899
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| ||||  ||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  37000 ttgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 36901  T
Q  130 tt 131  Q
    ||    
T  36900 tt 36899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 212647 - 212546
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||| ||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  212647 ttgaaattggttcctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 212548  T
Q  130 tt 131  Q
    ||    
T  212547 tt 212546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 131
Target Start/End: Original strand, 186660 - 186738
Alignment:
Q  52 tcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||||||| |||||||||||||||  |||||| ||||| || |||| ||| |||||||||||  ||||| ||||||||||    
T  186660 tcattttagtccttattttgagggt-taaaatcaaatacttgacatattataaggactaattttaatataaataaatttt 186738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 7e-22; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 8926335 - 8926436
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||| ||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  8926335 ttgaaattggtccctataatattcattttagtcctcattttgagagactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 8926434  T
Q  130 tt 131  Q
    ||    
T  8926435 tt 8926436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 30609101 - 30609000
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| ||||  ||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  30609101 ttgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 30609002  T
Q  130 tt 131  Q
    ||    
T  30609001 tt 30609000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 29819534 - 29819626
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatga 122  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || ||||||||||    
T  29819534 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaattaaatattctacatattacaaggaccaaatccaatatga 29819626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 5404718 - 5404819
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    |||||||  |||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| ||||||||||  | |||||||||||| ||||    
T  5404718 ttgaaattagtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccgaatccaatatgaatcaatt 5404817  T
Q  130 tt 131  Q
    ||    
T  5404818 tt 5404819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 8936592 - 8936693
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| ||||  ||||||| ||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  8936592 ttgaaattggtccctataatattcattttagtcctcgttttgagagactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 8936691  T
Q  130 tt 131  Q
    ||    
T  8936692 tt 8936693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 17238182 - 17238283
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||  ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || | |||||||||| ||||    
T  17238182 ttgaaattggtcccaataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaattcaatatgaatcaatt 17238281  T
Q  130 tt 131  Q
    ||    
T  17238282 tt 17238283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 19661584 - 19661483
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||||||||| || | |||||||||||||||||| ||||||| ||||| |||||||||| || | |||||||||| ||||    
T  19661584 ttgaaattggtccctataatattcattttagtcttcattttgagggactaaaatcaaatattctacatattacaaggaccaaattcaatatgaatcaatt 19661485  T
Q  130 tt 131  Q
    ||    
T  19661484 tt 19661483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 31717323 - 31717424
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||| | ||| |||||||||| |||| |||||||||||||||||  ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  31717323 ttgaaattggtccatataatattcattttagtcctcattttgagggactaaaaacaaatattctacatattacaaggaccaaatccaatatgaatcaatt 31717422  T
Q  130 tt 131  Q
    ||    
T  31717423 tt 31717424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 52 - 131
Target Start/End: Original strand, 16525363 - 16525442
Alignment:
Q  52 tcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||||    
T  16525363 tcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatttt 16525442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 3484932 - 3485010
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggac 108  Q
    ||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| ||||||||||    
T  3484932 ttgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggac 3485010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 132
Target Start/End: Original strand, 4601121 - 4601203
Alignment:
Q  50 attcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaattttg 132  Q
    |||||||||| || |||||||||||||||||||| ||||||| ||||| |||||||||| |  |||||||||||| |||||||    
T  4601121 attcattttagtctttattttgagggactaaaatcaaatattctacatattacaaggaccatatccaatatgaatcaattttg 4601203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 3345254 - 3345154
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| ||||||||||  |||  ||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||    
T  3345254 ttgaaattggtccctataatattcattttag-cctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatt 3345156  T
Q  130 tt 131  Q
    ||    
T  3345155 tt 3345154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 5923975 - 5924076
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| |||||||  || |||||||||| ||||  ||||||||||||||||| ||||||| ||||| |||||||||| || |||| ||||||| ||||    
T  5923975 ttgaaattggtccctagaatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccattatgaatcaatt 5924074  T
Q  130 tt 131  Q
    ||    
T  5924075 tt 5924076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 28853633 - 28853734
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||| | ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| ||||||| || || || ||||||||| ||||    
T  28853633 ttgaaattggtccatataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaagaaccaaatctaatatgaatcaatt 28853732  T
Q  130 tt 131  Q
    ||    
T  28853733 tt 28853734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 33783632 - 33783531
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatt 129  Q
    ||||||| ||||||| ||| |||| ||||| |||| |||||||||||||||||| ||||||| |||||  ||||||||| || | |||||||||| ||||    
T  33783632 ttgaaattggtccctataatattctttttagtcctcattttgagggactaaaatcaaatattctacatactacaaggaccaaattcaatatgaatcaatt 33783533  T
Q  130 tt 131  Q
    ||    
T  33783532 tt 33783531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 18502791 - 18502732
Alignment:
Q  72 agggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||||    
T  18502791 agggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatttt 18502732  T

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Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 26272173 - 26272229
Alignment:
Q  75 gactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    ||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||||    
T  26272173 gactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatttt 26272229  T

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Target: scaffold0103 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 43501 - 43411
Alignment:
Q  41 ccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||| ||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||||| || |||||||||||| ||||||    
T  43501 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaatttt 43411  T

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Target: scaffold0126 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 131
Target Start/End: Complemental strand, 36226 - 36128
Alignment:
Q  33 aaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||| ||||| | ||| |||||||||| ||||  ||||||||||||||||| ||||||| ||||| ||||||||||  | |||||||||||| ||||||    
T  36226 aaattggtccttataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccgaatccaatatgaatcaatttt 36128  T

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Target: scaffold0036 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 11282 - 11202
Alignment:
Q  54 attttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaattttgca 134  Q
    |||||| || ||||||||||||| |||||| ||||||| ||||| ||||||||| ||| || ||||||||| |||||||||    
T  11282 attttagtctttattttgagggattaaaattaaatattctacatattacaaggattaaatctaatatgaatcaattttgca 11202  T

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Target: scaffold0147 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 25295 - 25360
Alignment:
Q  66 attttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||||||||||||||||| ||||||| ||||| |||||||||  || |||||||||||| ||||||    
T  25295 attttgagggactaaaatcaaatattctacatattacaaggatcaaatccaatatgaatcaatttt 25360  T

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Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 118176 - 118253
Alignment:
Q  30 ttgaaatcggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggac 108  Q
    ||||||| ||||||| ||| ||| |||||| |||| ||||||||||||| |||| ||||||| ||||| ||||||||||    
T  118176 ttgaaattggtccctataatatttattttagtcctcattttgagggact-aaatcaaatattctacatattacaaggac 118253  T

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Target: scaffold0069 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 131
Target Start/End: Original strand, 61938 - 62016
Alignment:
Q  52 tcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    |||||||| |||||||||||||||  |||||| ||||| || |||| ||| |||||||||||  ||||| ||||||||||    
T  61938 tcattttagtccttattttgagggt-taaaatcaaatacttgacatattataaggactaattttaatataaataaatttt 62016  T

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Target: scaffold0028 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 74071 - 74163
Alignment:
Q  38 ggtccctttaaaattcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaatttt 131  Q
    ||||||| ||| |||||||||| || |  || |||||||||||||| |||| || ||||  |||||||||| || |||||||||||| ||||||    
T  74071 ggtccctataatattcattttagtcatcgttatgagggactaaaattaaattttctacaa-ttacaaggaccaaatccaatatgaatcaatttt 74163  T

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Target: scaffold0238 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 22941 - 22862
Alignment:
Q  52 tcattttattccttattttgagggactaaaataaaatattttacatgttacaaggactaattccaatatgaataaattttg 132  Q
    |||||||| |||||||||||||||  |||||| |||||| | |||| ||| ||||||||| |  ||||| |||||||||||    
T  22941 tcattttagtccttattttgaggg-ttaaaatcaaatatatgacatattataaggactaactttaatataaataaattttg 22862  T

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