View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6338_high_3 (Length: 278)
Name: NF6338_high_3
Description: NF6338
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6338_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 38762522 - 38762262
Alignment:
| Q |
1 |
caaactcaagtaaagatgttcaaacaacaaattcggcagttgaactaggttttacagactttatacataaccaacacatacatgcacttcaattttgatg |
100 |
Q |
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| T |
38762522 |
caaactcgagtaaagatgttcaaccaacaacttcggcaattgaactaggttttacagactttatacataaccaacacatacatgcacttcaattttgatg |
38762423 |
T |
|
| Q |
101 |
aattactctagctaatttggacatacatatacataacatacccacccgatgaaagaaatgaagaatatcttgcaaaacgtcgtgaatggcagaggcggtg |
200 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
38762422 |
aattactctagctaatttggacacacatatacataacatacccacccgatgaaagaaatgaagaagatcttgcaaaacgtcgtgaatggcagaggcggtg |
38762323 |
T |
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| Q |
201 |
cacttttcctgtgtccaaattatagtatagctttcagtaatcaaagctggtatgaataatt |
261 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38762322 |
cacttttcctgtgtccaaattatagtatagctttcagtaatcaaagctggtatgaataatt |
38762262 |
T |
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