View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6339_high_35 (Length: 314)
Name: NF6339_high_35
Description: NF6339
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6339_high_35 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 314
Target Start/End: Complemental strand, 48449996 - 48449683
Alignment:
| Q |
1 |
tttctttcggtaacctgtttctccaatgtttcttaatttccacaagcctctctatccaattagctctatttactctctcttcattactagtttccaccat |
100 |
Q |
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| T |
48449996 |
tttctttcggtaacctgtttctccaatgtttcttaatttccacaagcctctctatccaattagctctatttactctctcttcattactagtttccaccat |
48449897 |
T |
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| Q |
101 |
gttttcctcaatatttacatccttctcatttttattcatatccttgccgttttgttggtcaaataagaaagagcgcaaagaatttgggagaatggaacct |
200 |
Q |
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| T |
48449896 |
gttttcctcaatatttacatccttctcccttttattcatatccttgccgttttgttggtcaaataagaaagagcgcaaagaatttgggagaatggaacct |
48449797 |
T |
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| Q |
201 |
gaaaattgaaatggagaagttcccattgacccgttgtccttaagttttggttgcacagatgtggcttgtatacggttgaaggagcaacatagatagctgt |
300 |
Q |
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| T |
48449796 |
gaaaattgaaatggagaagttcccattgacccgttgtccttaagttttggttgcacagatgtggcttgtatacggttgaaggagcaacatagatagctgt |
48449697 |
T |
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| Q |
301 |
cagaataagacctc |
314 |
Q |
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| T |
48449696 |
cagaataagacctc |
48449683 |
T |
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