View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6339_high_37 (Length: 299)

Name: NF6339_high_37
Description: NF6339
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6339_high_37
NF6339_high_37
[»] chr1 (58 HSPs)
chr1 (1-197)||(46432664-46432852)
chr1 (47-279)||(22922591-22922834)
chr1 (46-180)||(22236792-22236921)
chr1 (46-197)||(35983024-35983169)
chr1 (46-176)||(19208364-19208489)
chr1 (46-177)||(21753219-21753344)
chr1 (204-285)||(46431466-46431547)
chr1 (47-177)||(52928815-52928940)
chr1 (112-197)||(13513218-13513303)
chr1 (47-175)||(21897103-21897226)
chr1 (49-180)||(33680164-33680291)
chr1 (47-165)||(12270441-12270554)
chr1 (47-176)||(22356682-22356806)
chr1 (47-176)||(22358368-22358492)
chr1 (112-197)||(20247526-20247611)
chr1 (204-285)||(52928680-52928761)
chr1 (49-165)||(13213712-13213823)
chr1 (47-176)||(16369142-16369267)
chr1 (46-176)||(51325619-51325744)
chr1 (204-285)||(33680329-33680410)
chr1 (47-145)||(16757798-16757891)
chr1 (47-176)||(35261865-35261989)
chr1 (47-108)||(16698644-16698706)
chr1 (1-46)||(19420065-19420110)
chr1 (112-175)||(43689755-43689819)
chr1 (45-162)||(20439970-20440082)
chr1 (47-165)||(21704234-21704347)
chr1 (207-265)||(21709330-21709388)
chr1 (207-265)||(21713873-21713931)
chr1 (47-165)||(40388355-40388468)
chr1 (204-264)||(21897000-21897061)
chr1 (1-46)||(40769079-40769124)
chr1 (1-46)||(49542699-49542744)
chr1 (47-176)||(50211030-50211155)
chr1 (47-176)||(22450041-22450164)
chr1 (47-176)||(26064104-26064229)
chr1 (44-152)||(20272111-20272215)
chr1 (112-169)||(8881652-8881710)
chr1 (47-96)||(22356279-22356329)
chr1 (47-96)||(22357965-22358015)
chr1 (1-46)||(16861678-16861723)
chr1 (46-100)||(21160943-21160999)
chr1 (47-165)||(20847948-20848062)
chr1 (47-165)||(20915454-20915568)
chr1 (47-176)||(50614967-50615092)
chr1 (47-176)||(50622795-50622920)
chr1 (211-285)||(22236965-22237038)
chr1 (47-98)||(41229907-41229958)
chr1 (109-171)||(46199562-46199629)
chr1 (47-96)||(34508956-34509006)
chr1 (112-144)||(12204462-12204494)
chr1 (48-84)||(20134369-20134405)
chr1 (47-96)||(21302422-21302473)
chr1 (206-265)||(21753390-21753450)
chr1 (206-265)||(22359419-22359479)
chr1 (47-100)||(23080997-23081052)
chr1 (120-171)||(25264111-25264163)
chr1 (47-96)||(27240660-27240711)
[»] chr6 (58 HSPs)
chr6 (47-285)||(27333843-27334090)
chr6 (47-285)||(27394583-27394830)
chr6 (46-187)||(25957805-25957940)
chr6 (46-187)||(25965852-25965987)
chr6 (47-173)||(22081571-22081692)
chr6 (47-197)||(19651368-19651513)
chr6 (47-176)||(24265630-24265754)
chr6 (47-165)||(8230428-8230541)
chr6 (47-178)||(13018640-13018767)
chr6 (47-180)||(25643472-25643601)
chr6 (47-171)||(23018546-23018666)
chr6 (48-176)||(9101419-9101542)
chr6 (44-165)||(16015794-16015910)
chr6 (49-176)||(19954376-19954497)
chr6 (48-176)||(1642797-1642920)
chr6 (43-175)||(20108280-20108407)
chr6 (43-165)||(16493518-16493634)
chr6 (47-175)||(12940372-12940496)
chr6 (47-179)||(20592986-20593116)
chr6 (206-265)||(25630063-25630122)
chr6 (47-163)||(16449378-16449489)
chr6 (70-176)||(19667548-19667649)
chr6 (46-175)||(28291698-28291823)
chr6 (204-264)||(20108449-20108511)
chr6 (45-111)||(17230564-17230629)
chr6 (112-165)||(23535302-23535356)
chr6 (112-165)||(18318484-18318537)
chr6 (112-165)||(18321884-18321937)
chr6 (46-109)||(25687726-25687791)
chr6 (46-109)||(25690273-25690338)
chr6 (46-109)||(25697066-25697131)
chr6 (46-109)||(25721946-25722011)
chr6 (47-167)||(20075868-20075984)
chr6 (46-96)||(16921503-16921554)
chr6 (46-176)||(18404003-18404127)
chr6 (47-98)||(22804390-22804441)
chr6 (125-175)||(22781041-22781091)
chr6 (47-96)||(29059724-29059774)
chr6 (47-96)||(35244775-35244825)
chr6 (39-80)||(19398796-19398837)
chr6 (46-98)||(19104258-19104310)
chr6 (47-98)||(15706826-15706877)
chr6 (211-265)||(19651543-19651598)
chr6 (109-171)||(27574149-27574212)
chr6 (112-165)||(4644673-4644727)
chr6 (125-175)||(20639094-20639144)
chr6 (47-96)||(28497350-28497400)
chr6 (47-96)||(29809761-29809811)
chr6 (47-80)||(18897256-18897289)
chr6 (47-88)||(25604284-25604325)
chr6 (47-88)||(25612622-25612663)
chr6 (112-171)||(15688697-15688757)
chr6 (114-165)||(17201352-17201404)
chr6 (222-265)||(22081463-22081507)
chr6 (46-98)||(23083967-23084019)
chr6 (206-265)||(28497183-28497243)
chr6 (206-265)||(29809594-29809654)
chr6 (112-175)||(35137624-35137688)
[»] chr8 (55 HSPs)
chr8 (46-285)||(38855928-38856176)
chr8 (46-176)||(6518660-6518783)
chr8 (46-176)||(21672805-21672930)
chr8 (46-145)||(6519722-6519816)
chr8 (47-180)||(23761680-23761808)
chr8 (47-164)||(21668088-21668200)
chr8 (211-282)||(21672978-21673049)
chr8 (47-175)||(20493415-20493538)
chr8 (47-165)||(41597310-41597423)
chr8 (47-165)||(45291609-45291722)
chr8 (47-165)||(22964929-22965041)
chr8 (46-175)||(362418-362543)
chr8 (47-165)||(21285193-21285306)
chr8 (111-175)||(8730337-8730402)
chr8 (55-152)||(5610987-5611079)
chr8 (222-280)||(23761567-23761625)
chr8 (1-46)||(10267077-10267122)
chr8 (46-111)||(20988308-20988373)
chr8 (46-176)||(21162897-21163020)
chr8 (123-176)||(23777661-23777714)
chr8 (46-96)||(21390330-21390381)
chr8 (46-96)||(21396851-21396902)
chr8 (46-96)||(21779656-21779707)
chr8 (46-96)||(21791344-21791395)
chr8 (46-96)||(21919831-21919882)
chr8 (114-176)||(21169533-21169595)
chr8 (114-176)||(44475146-44475208)
chr8 (114-176)||(44478408-44478470)
chr8 (47-96)||(45131874-45131924)
chr8 (112-168)||(32806799-32806856)
chr8 (47-169)||(13508909-13509027)
chr8 (47-169)||(13598439-13598557)
chr8 (112-171)||(17440368-17440428)
chr8 (112-171)||(19155735-19155795)
chr8 (47-165)||(19802600-19802714)
chr8 (112-171)||(21589493-21589553)
chr8 (47-87)||(40398039-40398079)
chr8 (47-98)||(23668452-23668503)
chr8 (47-96)||(5867123-5867173)
chr8 (46-80)||(18880112-18880146)
chr8 (204-263)||(21162794-21162855)
chr8 (204-263)||(21169430-21169491)
chr8 (47-96)||(22819429-22819479)
chr8 (46-84)||(23647805-23647843)
chr8 (206-265)||(18819127-18819188)
chr8 (47-84)||(18819318-18819355)
chr8 (46-96)||(23405646-23405698)
chr8 (206-265)||(23405731-23405792)
chr8 (46-96)||(31970500-31970552)
chr8 (47-103)||(4083132-4083188)
chr8 (206-265)||(17140271-17140331)
chr8 (47-103)||(18679028-18679084)
chr8 (47-103)||(18718217-18718273)
chr8 (206-265)||(18879928-18879988)
chr8 (112-175)||(23479544-23479608)
[»] scaffold0037 (2 HSPs)
scaffold0037 (46-285)||(23295-23545)
scaffold0037 (114-176)||(22337-22399)
[»] chr4 (66 HSPs)
chr4 (46-285)||(14928468-14928717)
chr4 (47-197)||(16375625-16375770)
chr4 (47-197)||(15993802-15993947)
chr4 (48-197)||(46641735-46641879)
chr4 (50-197)||(39707105-39707247)
chr4 (47-180)||(12773258-12773385)
chr4 (47-180)||(8842176-8842304)
chr4 (46-175)||(14700-14824)
chr4 (115-197)||(15189059-15189141)
chr4 (112-197)||(56116957-56117042)
chr4 (45-165)||(15898602-15898717)
chr4 (47-169)||(52244040-52244157)
chr4 (45-169)||(43199398-43199518)
chr4 (45-108)||(22352654-22352718)
chr4 (111-175)||(15532429-15532494)
chr4 (1-46)||(39218956-39219001)
chr4 (1-46)||(39225482-39225527)
chr4 (45-165)||(3825954-3826069)
chr4 (47-176)||(53083000-53083125)
chr4 (222-285)||(15090684-15090747)
chr4 (1-43)||(234894-234936)
chr4 (207-265)||(44674956-44675014)
chr4 (204-260)||(16375545-16375602)
chr4 (112-175)||(13843469-13843533)
chr4 (47-179)||(15090503-15090627)
chr4 (204-264)||(14596-14658)
chr4 (46-172)||(14037867-14037988)
chr4 (39-98)||(50159314-50159373)
chr4 (114-176)||(16349462-16349524)
chr4 (112-169)||(17995153-17995211)
chr4 (204-265)||(39707020-39707082)
chr4 (1-43)||(47114590-47114632)
chr4 (134-180)||(52874016-52874062)
chr4 (45-98)||(9636897-9636950)
chr4 (46-165)||(15369200-15369315)
chr4 (46-165)||(15372708-15372823)
chr4 (1-46)||(40055557-40055602)
chr4 (1-46)||(40056357-40056402)
chr4 (112-171)||(10697184-10697244)
chr4 (112-171)||(10910953-10911013)
chr4 (112-176)||(12289036-12289100)
chr4 (112-168)||(14163767-14163822)
chr4 (47-165)||(14279515-14279629)
chr4 (47-111)||(14853783-14853846)
chr4 (204-285)||(15993700-15993779)
chr4 (206-265)||(44052191-44052251)
chr4 (128-175)||(22631795-22631842)
chr4 (128-175)||(22632713-22632760)
chr4 (204-262)||(56116875-56116934)
chr4 (47-96)||(14054161-14054211)
chr4 (46-111)||(14700682-14700747)
chr4 (47-96)||(16352646-16352696)
chr4 (114-176)||(16357750-16357812)
chr4 (47-96)||(17045686-17045736)
chr4 (47-165)||(20149030-20149143)
chr4 (47-96)||(7797953-7798002)
chr4 (50-110)||(14649867-14649927)
chr4 (46-96)||(15374997-15375049)
chr4 (46-96)||(15614275-15614327)
chr4 (46-96)||(16240844-16240896)
chr4 (46-83)||(56566031-56566068)
chr4 (47-94)||(12521295-12521343)
chr4 (112-171)||(13593520-13593580)
chr4 (112-168)||(14157062-14157117)
chr4 (45-96)||(14654338-14654390)
chr4 (112-171)||(19608510-19608570)
[»] scaffold0333 (2 HSPs)
scaffold0333 (47-197)||(5760-5904)
scaffold0333 (47-98)||(19347-19398)
[»] chr3 (84 HSPs)
chr3 (47-197)||(14233626-14233770)
chr3 (48-197)||(15467050-15467193)
chr3 (47-178)||(49971109-49971233)
chr3 (47-180)||(16096533-16096661)
chr3 (47-180)||(32306848-32306976)
chr3 (46-194)||(12268347-12268491)
chr3 (46-197)||(12936428-12936574)
chr3 (47-180)||(1645494-1645621)
chr3 (47-195)||(1466734-1466878)
chr3 (47-196)||(49390943-49391086)
chr3 (47-197)||(49668860-49669005)
chr3 (49-197)||(9512114-9512257)
chr3 (49-197)||(9520089-9520232)
chr3 (45-175)||(52524577-52524702)
chr3 (49-197)||(16102972-16103116)
chr3 (47-165)||(22148706-22148819)
chr3 (47-165)||(37643417-37643530)
chr3 (45-175)||(51298683-51298809)
chr3 (128-197)||(15060942-15061013)
chr3 (47-194)||(12175056-12175200)
chr3 (47-175)||(14765599-14765723)
chr3 (211-285)||(25477076-25477150)
chr3 (111-175)||(12303786-12303851)
chr3 (111-175)||(36979659-36979724)
chr3 (111-175)||(37005098-37005163)
chr3 (48-178)||(37251954-37252080)
chr3 (47-175)||(9531409-9531533)
chr3 (55-152)||(22790978-22791070)
chr3 (47-165)||(8898212-8898325)
chr3 (1-46)||(10566242-10566287)
chr3 (1-46)||(10569492-10569537)
chr3 (44-165)||(17736393-17736509)
chr3 (44-165)||(19037662-19037778)
chr3 (112-175)||(18440747-18440811)
chr3 (112-175)||(19485821-19485885)
chr3 (36-176)||(607172-607308)
chr3 (41-96)||(14571805-14571860)
chr3 (46-96)||(14577692-14577742)
chr3 (204-285)||(16096699-16096779)
chr3 (39-96)||(30025258-30025316)
chr3 (39-96)||(30027741-30027799)
chr3 (1-46)||(8545469-8545514)
chr3 (47-111)||(43925097-43925162)
chr3 (125-180)||(17498607-17498663)
chr3 (67-169)||(17661732-17661829)
chr3 (47-146)||(21836450-21836546)
chr3 (46-165)||(27901533-27901647)
chr3 (47-97)||(8498697-8498747)
chr3 (114-176)||(14447395-14447457)
chr3 (134-180)||(17487135-17487181)
chr3 (47-176)||(22111188-22111311)
chr3 (47-96)||(23084010-23084060)
chr3 (39-96)||(30023990-30024048)
chr3 (39-96)||(30029010-30029068)
chr3 (110-171)||(51157698-51157764)
chr3 (47-180)||(14972060-14972192)
chr3 (1-46)||(29674072-29674117)
chr3 (46-100)||(54587613-54587669)
chr3 (206-265)||(12398561-12398621)
chr3 (206-265)||(15467218-15467280)
chr3 (47-111)||(18368474-18368537)
chr3 (46-98)||(18701974-18702026)
chr3 (47-98)||(3395765-3395816)
chr3 (211-265)||(12936343-12936398)
chr3 (113-171)||(15448849-15448908)
chr3 (47-98)||(43891208-43891259)
chr3 (211-265)||(49390858-49390913)
chr3 (211-265)||(49668775-49668830)
chr3 (47-96)||(11425605-11425655)
chr3 (223-264)||(17661619-17661661)
chr3 (112-165)||(23273931-23273985)
chr3 (47-96)||(25477262-25477312)
chr3 (46-80)||(28193875-28193909)
chr3 (133-171)||(55319306-55319344)
chr3 (222-262)||(15061054-15061095)
chr3 (46-96)||(15458662-15458714)
chr3 (1-38)||(20282755-20282792)
chr3 (206-265)||(13211039-13211099)
chr3 (222-265)||(16103157-16103201)
chr3 (109-171)||(22650790-22650858)
chr3 (112-144)||(24154058-24154090)
chr3 (211-265)||(26682703-26682759)
chr3 (112-144)||(30176316-30176348)
chr3 (112-171)||(31225810-31225870)
[»] chr7 (66 HSPs)
chr7 (47-197)||(14982598-14982742)
chr7 (47-197)||(15412209-15412353)
chr7 (47-180)||(44013349-44013477)
chr7 (47-197)||(47830947-47831092)
chr7 (50-265)||(18004811-18005038)
chr7 (47-197)||(9391033-9391178)
chr7 (47-175)||(16220568-16220692)
chr7 (47-180)||(66916-67044)
chr7 (46-169)||(15115339-15115457)
chr7 (47-176)||(14158035-14158159)
chr7 (47-165)||(19487838-19487951)
chr7 (46-177)||(19158848-19158974)
chr7 (46-177)||(20758247-20758373)
chr7 (45-175)||(37728953-37729079)
chr7 (46-176)||(12900468-12900593)
chr7 (46-175)||(37726115-37726240)
chr7 (49-285)||(811851-812099)
chr7 (47-165)||(29329791-29329904)
chr7 (46-171)||(44115679-44115799)
chr7 (47-169)||(15111765-15111882)
chr7 (47-175)||(11301570-11301694)
chr7 (109-175)||(23667139-23667206)
chr7 (47-165)||(26211177-26211290)
chr7 (111-175)||(15165463-15165528)
chr7 (112-165)||(22072208-22072261)
chr7 (47-175)||(10898704-10898828)
chr7 (49-169)||(16055476-16055591)
chr7 (47-175)||(6320689-6320814)
chr7 (111-175)||(14564440-14564505)
chr7 (46-172)||(15009333-15009455)
chr7 (1-46)||(47020660-47020705)
chr7 (222-285)||(2282975-2283038)
chr7 (45-169)||(12256683-12256802)
chr7 (206-261)||(15164334-15164389)
chr7 (47-169)||(2283115-2283230)
chr7 (2-46)||(24185105-24185149)
chr7 (47-165)||(42376831-42376945)
chr7 (47-176)||(3565095-3565219)
chr7 (3-46)||(20348212-20348255)
chr7 (111-175)||(29794515-29794581)
chr7 (111-175)||(29798334-29798400)
chr7 (207-265)||(14194336-14194394)
chr7 (47-165)||(15087147-15087260)
chr7 (211-261)||(15144754-15144804)
chr7 (207-265)||(18155574-18155632)
chr7 (114-176)||(18870541-18870603)
chr7 (46-165)||(10064961-10065076)
chr7 (46-110)||(42461125-42461188)
chr7 (47-98)||(16578546-16578597)
chr7 (47-98)||(16587065-16587116)
chr7 (47-177)||(40442652-40442777)
chr7 (211-260)||(67088-67138)
chr7 (47-96)||(13636278-13636328)
chr7 (47-80)||(2532088-2532121)
chr7 (47-100)||(2834231-2834287)
chr7 (47-80)||(12698027-12698060)
chr7 (46-96)||(16403300-16403352)
chr7 (45-98)||(32299816-32299869)
chr7 (112-171)||(9643666-9643726)
chr7 (112-171)||(11092365-11092425)
chr7 (206-265)||(12698185-12698245)
chr7 (112-171)||(14275105-14275165)
chr7 (204-265)||(16220462-16220526)
chr7 (46-98)||(16581293-16581345)
chr7 (112-171)||(16997557-16997617)
chr7 (112-144)||(18457262-18457294)
[»] scaffold0556 (1 HSPs)
scaffold0556 (46-180)||(5988-6117)
[»] scaffold0207 (3 HSPs)
scaffold0207 (46-178)||(3471-3598)
scaffold0207 (211-285)||(3352-3425)
scaffold0207 (114-176)||(4718-4780)
[»] scaffold0102 (2 HSPs)
scaffold0102 (47-180)||(18428-18556)
scaffold0102 (211-285)||(18600-18673)
[»] scaffold0023 (5 HSPs)
scaffold0023 (46-197)||(100710-100856)
scaffold0023 (47-187)||(99504-99639)
scaffold0023 (70-180)||(40929-41034)
scaffold0023 (211-282)||(40814-40885)
scaffold0023 (205-285)||(99674-99752)
[»] scaffold0010 (2 HSPs)
scaffold0010 (49-180)||(129079-129204)
scaffold0010 (47-176)||(118463-118588)
[»] scaffold0008 (4 HSPs)
scaffold0008 (46-180)||(15534-15663)
scaffold0008 (211-283)||(15419-15490)
scaffold0008 (46-96)||(84794-84845)
scaffold0008 (46-176)||(79210-79333)
[»] chr5 (65 HSPs)
chr5 (47-197)||(22960334-22960480)
chr5 (46-169)||(26012870-26012988)
chr5 (47-180)||(19668068-19668195)
chr5 (47-180)||(21564709-21564836)
chr5 (47-169)||(22141939-22142056)
chr5 (47-197)||(29916395-29916540)
chr5 (112-197)||(21742833-21742918)
chr5 (47-169)||(20032530-20032647)
chr5 (49-177)||(21330356-21330480)
chr5 (43-165)||(21731094-21731210)
chr5 (43-165)||(21809214-21809330)
chr5 (45-173)||(41862620-41862744)
chr5 (47-175)||(5890526-5890650)
chr5 (47-175)||(9774211-9774335)
chr5 (47-165)||(14047254-14047367)
chr5 (47-165)||(18319839-18319952)
chr5 (45-165)||(10776546-10776661)
chr5 (46-175)||(37606579-37606704)
chr5 (46-108)||(40724681-40724744)
chr5 (1-46)||(5912495-5912540)
chr5 (1-46)||(5919430-5919475)
chr5 (1-46)||(6749939-6749984)
chr5 (1-46)||(35418661-35418706)
chr5 (49-180)||(9077130-9077255)
chr5 (47-165)||(18417284-18417398)
chr5 (204-265)||(21330241-21330303)
chr5 (47-165)||(24066352-24066465)
chr5 (46-111)||(23475342-23475406)
chr5 (1-46)||(36101579-36101624)
chr5 (109-165)||(41096467-41096524)
chr5 (112-171)||(20298593-20298653)
chr5 (124-176)||(21275641-21275693)
chr5 (46-98)||(21556281-21556333)
chr5 (47-111)||(23468971-23469034)
chr5 (47-176)||(38147190-38147315)
chr5 (109-171)||(261821-261888)
chr5 (207-285)||(21564876-21564953)
chr5 (124-175)||(21886525-21886576)
chr5 (114-176)||(19509766-19509828)
chr5 (114-176)||(21367464-21367526)
chr5 (113-171)||(21876760-21876818)
chr5 (207-265)||(26703443-26703501)
chr5 (207-265)||(26973176-26973234)
chr5 (47-96)||(37723103-37723153)
chr5 (1-46)||(38485093-38485138)
chr5 (47-96)||(13024507-13024558)
chr5 (47-96)||(13094691-13094742)
chr5 (46-96)||(21293849-21293900)
chr5 (124-171)||(21872491-21872538)
chr5 (45-84)||(24492743-24492782)
chr5 (125-175)||(8287647-8287697)
chr5 (47-96)||(19661718-19661768)
chr5 (47-108)||(22074212-22074274)
chr5 (47-146)||(22179052-22179147)
chr5 (112-169)||(24211792-24211850)
chr5 (134-180)||(25430662-25430708)
chr5 (47-165)||(36155474-36155586)
chr5 (111-145)||(42958871-42958905)
chr5 (45-98)||(21407545-21407598)
chr5 (112-165)||(21503029-21503082)
chr5 (45-98)||(21558943-21558996)
chr5 (45-98)||(23203763-23203816)
chr5 (45-98)||(33897078-33897131)
chr5 (47-96)||(21296100-21296151)
chr5 (47-96)||(21998423-21998474)
[»] scaffold0278 (2 HSPs)
scaffold0278 (46-180)||(4804-4932)
scaffold0278 (211-278)||(4976-5043)
[»] scaffold0125 (1 HSPs)
scaffold0125 (46-180)||(45051-45179)
[»] scaffold0530 (4 HSPs)
scaffold0530 (47-180)||(11034-11163)
scaffold0530 (47-177)||(1898-2023)
scaffold0530 (204-265)||(1783-1845)
scaffold0530 (222-265)||(11231-11275)
[»] scaffold0621 (4 HSPs)
scaffold0621 (46-180)||(1270-1400)
scaffold0621 (46-180)||(5687-5817)
scaffold0621 (211-282)||(1444-1516)
scaffold0621 (211-282)||(5861-5933)
[»] chr2 (56 HSPs)
chr2 (49-197)||(22134988-22135131)
chr2 (47-180)||(28405165-28405292)
chr2 (47-169)||(19819835-19819951)
chr2 (47-176)||(22413982-22414106)
chr2 (47-165)||(43136457-43136570)
chr2 (47-181)||(19795270-19795399)
chr2 (47-197)||(24689120-24689264)
chr2 (46-167)||(23713748-23713864)
chr2 (47-175)||(8572-8695)
chr2 (47-177)||(7678754-7678878)
chr2 (46-175)||(20259407-20259532)
chr2 (47-175)||(23866777-23866901)
chr2 (111-175)||(10687050-10687115)
chr2 (47-176)||(20520984-20521109)
chr2 (47-176)||(8905887-8906011)
chr2 (47-175)||(20616492-20616616)
chr2 (204-285)||(7678931-7679012)
chr2 (211-285)||(23059863-23059937)
chr2 (47-176)||(18787580-18787705)
chr2 (204-285)||(24689016-24689097)
chr2 (109-165)||(29594139-29594196)
chr2 (44-111)||(25106080-25106148)
chr2 (204-264)||(8468-8530)
chr2 (46-89)||(23066231-23066274)
chr2 (46-89)||(23075681-23075724)
chr2 (46-108)||(23104255-23104318)
chr2 (114-176)||(6481042-6481104)
chr2 (114-176)||(6484509-6484571)
chr2 (112-169)||(20634681-20634739)
chr2 (47-108)||(23110829-23110891)
chr2 (47-176)||(23790420-23790548)
chr2 (112-169)||(24316751-24316809)
chr2 (222-263)||(23030715-23030756)
chr2 (47-96)||(24085930-24085978)
chr2 (115-175)||(30647689-30647750)
chr2 (46-98)||(357051-357103)
chr2 (216-285)||(19795452-19795519)
chr2 (112-171)||(27471567-27471627)
chr2 (113-171)||(19203172-19203231)
chr2 (46-89)||(23059700-23059743)
chr2 (226-285)||(23066409-23066468)
chr2 (226-285)||(23075859-23075918)
chr2 (46-96)||(24704043-24704094)
chr2 (133-171)||(21918374-21918412)
chr2 (125-175)||(22732238-22732288)
chr2 (125-175)||(22738948-22738998)
chr2 (47-96)||(24717383-24717433)
chr2 (49-169)||(24947065-24947181)
chr2 (44-100)||(299719-299776)
chr2 (114-175)||(22799955-22800016)
chr2 (45-100)||(21178227-21178283)
chr2 (222-265)||(22134903-22134947)
chr2 (120-171)||(24669901-24669953)
chr2 (120-171)||(24680350-24680402)
chr2 (46-98)||(24816366-24816418)
chr2 (45-104)||(45031063-45031123)
[»] scaffold0001 (3 HSPs)
scaffold0001 (47-194)||(159857-159999)
scaffold0001 (46-169)||(164072-164190)
scaffold0001 (206-265)||(198159-198220)
[»] scaffold0500 (2 HSPs)
scaffold0500 (47-197)||(10069-10214)
scaffold0500 (46-111)||(6699-6764)
[»] scaffold0273 (3 HSPs)
scaffold0273 (47-180)||(10849-10977)
scaffold0273 (204-265)||(10737-10799)
scaffold0273 (47-98)||(9123-9174)
[»] scaffold0100 (3 HSPs)
scaffold0100 (47-180)||(24711-24839)
scaffold0100 (204-265)||(24611-24673)
scaffold0100 (211-265)||(17014-17070)
[»] scaffold0075 (2 HSPs)
scaffold0075 (46-175)||(54398-54522)
scaffold0075 (204-264)||(54294-54356)
[»] scaffold0021 (3 HSPs)
scaffold0021 (47-176)||(137231-137355)
scaffold0021 (47-108)||(173964-174026)
scaffold0021 (47-96)||(121004-121055)
[»] scaffold0014 (2 HSPs)
scaffold0014 (47-176)||(125968-126092)
scaffold0014 (47-176)||(76882-77007)
[»] scaffold0042 (1 HSPs)
scaffold0042 (47-165)||(23195-23308)
[»] scaffold0357 (2 HSPs)
scaffold0357 (47-175)||(7511-7633)
scaffold0357 (46-110)||(16963-17028)
[»] scaffold0211 (1 HSPs)
scaffold0211 (67-197)||(29571-29696)
[»] scaffold0034 (3 HSPs)
scaffold0034 (46-165)||(31577-31691)
scaffold0034 (113-197)||(52969-53053)
scaffold0034 (81-165)||(31707-31785)
[»] scaffold0028 (4 HSPs)
scaffold0028 (47-197)||(40385-40530)
scaffold0028 (112-171)||(86982-87042)
scaffold0028 (222-285)||(40571-40632)
scaffold0028 (211-265)||(132062-132117)
[»] scaffold0221 (1 HSPs)
scaffold0221 (47-169)||(1096-1213)
[»] scaffold0150 (1 HSPs)
scaffold0150 (47-180)||(31294-31420)
[»] scaffold0078 (1 HSPs)
scaffold0078 (47-165)||(9699-9813)
[»] scaffold0040 (2 HSPs)
scaffold0040 (46-176)||(104479-104605)
scaffold0040 (47-95)||(10274-10322)
[»] scaffold0561 (1 HSPs)
scaffold0561 (46-176)||(9577-9702)
[»] scaffold0507 (1 HSPs)
scaffold0507 (47-169)||(8927-9044)
[»] scaffold0174 (1 HSPs)
scaffold0174 (45-165)||(24869-24984)
[»] scaffold0247 (1 HSPs)
scaffold0247 (46-165)||(2978-3092)
[»] scaffold0218 (2 HSPs)
scaffold0218 (47-176)||(8919-9043)
scaffold0218 (40-98)||(10133-10191)
[»] scaffold0012 (3 HSPs)
scaffold0012 (113-180)||(5507-5574)
scaffold0012 (211-265)||(5407-5462)
scaffold0012 (47-169)||(221450-221567)
[»] scaffold0820 (1 HSPs)
scaffold0820 (47-165)||(3797-3910)
[»] scaffold0476 (2 HSPs)
scaffold0476 (80-197)||(11955-12065)
scaffold0476 (204-285)||(12088-12171)
[»] scaffold0009 (2 HSPs)
scaffold0009 (47-175)||(84430-84553)
scaffold0009 (112-171)||(158389-158449)
[»] scaffold0877 (1 HSPs)
scaffold0877 (50-169)||(77-191)
[»] scaffold0839 (1 HSPs)
scaffold0839 (47-165)||(2842-2956)
[»] scaffold0628 (2 HSPs)
scaffold0628 (46-180)||(3916-4045)
scaffold0628 (46-180)||(8476-8605)
[»] scaffold0544 (2 HSPs)
scaffold0544 (46-175)||(736-861)
scaffold0544 (46-175)||(4320-4445)
[»] scaffold0011 (1 HSPs)
scaffold0011 (46-175)||(160738-160863)
[»] scaffold0007 (3 HSPs)
scaffold0007 (47-163)||(165517-165628)
scaffold0007 (46-165)||(161939-162053)
scaffold0007 (47-111)||(17354-17419)
[»] scaffold0327 (2 HSPs)
scaffold0327 (47-179)||(4147-4273)
scaffold0327 (225-285)||(4027-4087)
[»] scaffold0051 (1 HSPs)
scaffold0051 (47-175)||(50025-50149)
[»] scaffold0324 (2 HSPs)
scaffold0324 (112-197)||(2926-3011)
scaffold0324 (211-265)||(3041-3096)
[»] scaffold0243 (2 HSPs)
scaffold0243 (112-177)||(10937-11002)
scaffold0243 (222-265)||(10823-10867)
[»] scaffold0161 (2 HSPs)
scaffold0161 (46-177)||(37033-37159)
scaffold0161 (47-96)||(3265-3316)
[»] scaffold0022 (3 HSPs)
scaffold0022 (50-176)||(73055-73177)
scaffold0022 (46-148)||(42882-42980)
scaffold0022 (46-148)||(76602-76700)
[»] scaffold0005 (2 HSPs)
scaffold0005 (47-176)||(266583-266708)
scaffold0005 (50-110)||(167365-167425)
[»] scaffold0634 (1 HSPs)
scaffold0634 (46-174)||(5473-5598)
[»] scaffold0113 (2 HSPs)
scaffold0113 (46-165)||(1075-1189)
scaffold0113 (114-165)||(1604-1656)
[»] scaffold0293 (1 HSPs)
scaffold0293 (47-165)||(5881-5994)
[»] scaffold0413 (1 HSPs)
scaffold0413 (46-175)||(4768-4893)
[»] scaffold0122 (2 HSPs)
scaffold0122 (46-179)||(22443-22574)
scaffold0122 (125-178)||(39517-39572)
[»] scaffold2014 (2 HSPs)
scaffold2014 (47-176)||(184-309)
scaffold2014 (204-262)||(349-408)
[»] scaffold0639 (1 HSPs)
scaffold0639 (47-96)||(7665-7715)
[»] scaffold0217 (1 HSPs)
scaffold0217 (47-176)||(17421-17545)
[»] scaffold0194 (1 HSPs)
scaffold0194 (207-265)||(31853-31911)
[»] scaffold0020 (2 HSPs)
scaffold0020 (207-265)||(178225-178283)
scaffold0020 (114-169)||(97590-97646)
[»] scaffold0737 (1 HSPs)
scaffold0737 (47-111)||(2695-2760)
[»] scaffold0230 (2 HSPs)
scaffold0230 (112-165)||(21932-21985)
scaffold0230 (112-165)||(24927-24980)
[»] scaffold0420 (1 HSPs)
scaffold0420 (45-146)||(14560-14657)
[»] scaffold0130 (1 HSPs)
scaffold0130 (46-174)||(27048-27173)
[»] scaffold0088 (3 HSPs)
scaffold0088 (211-265)||(2288-2343)
scaffold0088 (47-111)||(33034-33099)
scaffold0088 (222-265)||(9683-9727)
[»] scaffold0084 (1 HSPs)
scaffold0084 (46-176)||(9478-9603)
[»] scaffold0070 (2 HSPs)
scaffold0070 (125-180)||(3771-3826)
scaffold0070 (211-265)||(3870-3923)
[»] scaffold0750 (1 HSPs)
scaffold0750 (134-180)||(3141-3187)
[»] scaffold0674 (1 HSPs)
scaffold0674 (112-169)||(2801-2859)
[»] scaffold0622 (1 HSPs)
scaffold0622 (47-96)||(4587-4637)
[»] scaffold0615 (1 HSPs)
scaffold0615 (114-176)||(2868-2930)
[»] scaffold0124 (1 HSPs)
scaffold0124 (134-180)||(26848-26894)
[»] scaffold0104 (1 HSPs)
scaffold0104 (114-176)||(8767-8829)
[»] scaffold0080 (2 HSPs)
scaffold0080 (46-177)||(20645-20772)
scaffold0080 (47-88)||(39136-39177)
[»] scaffold0079 (2 HSPs)
scaffold0079 (114-176)||(37757-37819)
scaffold0079 (114-176)||(22926-22988)
[»] scaffold0059 (1 HSPs)
scaffold0059 (114-176)||(57926-57988)
[»] scaffold0046 (1 HSPs)
scaffold0046 (125-175)||(27737-27787)
[»] scaffold1061 (2 HSPs)
scaffold1061 (224-265)||(42-83)
scaffold1061 (45-96)||(216-268)
[»] scaffold0456 (1 HSPs)
scaffold0456 (45-86)||(11308-11349)
[»] scaffold0228 (1 HSPs)
scaffold0228 (46-87)||(21205-21246)
[»] scaffold0064 (2 HSPs)
scaffold0064 (47-88)||(46194-46235)
scaffold0064 (47-170)||(27487-27606)
[»] scaffold0964 (1 HSPs)
scaffold0964 (206-265)||(3582-3642)
[»] scaffold0810 (1 HSPs)
scaffold0810 (112-175)||(1940-2004)
[»] scaffold0647 (1 HSPs)
scaffold0647 (206-265)||(6779-6839)
[»] scaffold0434 (1 HSPs)
scaffold0434 (120-171)||(7949-8001)
[»] scaffold0403 (1 HSPs)
scaffold0403 (206-265)||(4203-4263)
[»] scaffold0003 (2 HSPs)
scaffold0003 (49-96)||(340842-340890)
scaffold0003 (216-265)||(411816-411866)
[»] scaffold0718 (1 HSPs)
scaffold0718 (46-96)||(6000-6051)
[»] scaffold0486 (1 HSPs)
scaffold0486 (47-98)||(7425-7476)
[»] scaffold0309 (1 HSPs)
scaffold0309 (46-96)||(13081-13132)
[»] scaffold0198 (1 HSPs)
scaffold0198 (207-262)||(23183-23238)
[»] scaffold0116 (1 HSPs)
scaffold0116 (46-96)||(45306-45357)
[»] scaffold0106 (1 HSPs)
scaffold0106 (46-96)||(482-533)
[»] scaffold0071 (2 HSPs)
scaffold0071 (113-171)||(13281-13340)
scaffold0071 (46-96)||(3477-3529)
[»] scaffold0057 (1 HSPs)
scaffold0057 (109-171)||(71718-71785)
[»] scaffold0412 (1 HSPs)
scaffold0412 (114-176)||(14514-14576)
[»] scaffold0292 (2 HSPs)
scaffold0292 (125-175)||(2737-2787)
scaffold0292 (125-175)||(9774-9824)
[»] scaffold0120 (2 HSPs)
scaffold0120 (46-84)||(18224-18262)
scaffold0120 (125-179)||(12568-12624)
[»] scaffold0039 (1 HSPs)
scaffold0039 (46-111)||(114259-114324)
[»] scaffold0601 (1 HSPs)
scaffold0601 (133-170)||(9337-9374)
[»] scaffold0394 (1 HSPs)
scaffold0394 (47-80)||(11195-11228)
[»] scaffold0141 (1 HSPs)
scaffold0141 (47-96)||(36523-36575)
[»] scaffold0090 (1 HSPs)
scaffold0090 (46-96)||(29996-30048)
[»] scaffold0077 (1 HSPs)
scaffold0077 (46-111)||(56635-56699)
[»] scaffold0073 (1 HSPs)
scaffold0073 (47-111)||(56061-56125)
[»] scaffold0049 (1 HSPs)
scaffold0049 (47-96)||(78237-78289)
[»] scaffold2007 (1 HSPs)
scaffold2007 (112-171)||(477-537)
[»] scaffold0848 (1 HSPs)
scaffold0848 (46-86)||(4029-4069)
[»] scaffold0825 (1 HSPs)
scaffold0825 (206-265)||(344-404)
[»] scaffold0686 (1 HSPs)
scaffold0686 (112-144)||(4889-4921)
[»] scaffold0682 (1 HSPs)
scaffold0682 (46-98)||(6974-7026)
[»] scaffold0598 (1 HSPs)
scaffold0598 (49-96)||(1879-1927)
[»] scaffold0483 (1 HSPs)
scaffold0483 (46-96)||(372-424)
[»] scaffold0379 (2 HSPs)
scaffold0379 (46-98)||(7987-8039)
scaffold0379 (46-98)||(15179-15231)
[»] scaffold0338 (1 HSPs)
scaffold0338 (46-98)||(15820-15872)
[»] scaffold0305 (1 HSPs)
scaffold0305 (206-265)||(20037-20097)
[»] scaffold0282 (1 HSPs)
scaffold0282 (114-165)||(11780-11832)
[»] scaffold0280 (1 HSPs)
scaffold0280 (46-96)||(23224-23276)
[»] scaffold0239 (1 HSPs)
scaffold0239 (47-96)||(26211-26262)
[»] scaffold0111 (1 HSPs)
scaffold0111 (46-98)||(6255-6307)
[»] scaffold0109 (1 HSPs)
scaffold0109 (46-96)||(45159-45211)
[»] scaffold0081 (1 HSPs)
scaffold0081 (112-171)||(5540-5600)
[»] scaffold0063 (1 HSPs)
scaffold0063 (45-100)||(42857-42913)
[»] scaffold0045 (1 HSPs)
scaffold0045 (46-98)||(47199-47251)
[»] scaffold0035 (1 HSPs)
scaffold0035 (46-98)||(59962-60014)
[»] scaffold0029 (1 HSPs)
scaffold0029 (114-169)||(10586-10642)
[»] scaffold0018 (1 HSPs)
scaffold0018 (46-98)||(8340-8392)


Alignment Details
Target: chr1 (Bit Score: 135; Significance: 2e-70; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 46432852 - 46432664
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattca 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||  |||||||||||||||    
T  46432852 tatcttgtttactatttagtgaaataattaatttgataatgtcctttgtaacatcccgtttttccaacttaaaaattttaaac--atatcagagtattca 46432755  T
Q  101 acacataaacgtaaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcag 197  Q
    |||||      |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  46432754 acaca------taaacggaatgctacacttcataaaatcattaatgagataattaactaattatccttcaacataaatcaattccaaaacattgcag 46432664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 47 - 279
Target Start/End: Complemental strand, 22922834 - 22922591
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaa--catatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    |||||||||||||||| || ||||||||||||||||  ||| |||||||||| ||||||||||||||      |||||||||||||| ||||||||||||    
T  22922834 tgtaacaccccgttttcccaacttaaaaatttcaaaaacatttatcagagtaatcaacacataaacg------gaatgctacacttc-taaaatcataaa 22922742  T
Q  145 tgagataattaattaattatccttcaacataaatcaattcc-aagacattgcag-ggaatta---------------taagttttggtacgcatgcctca 227  Q
    |||||||||||| |||||||||| ||||||||||||||||| || ||||||||| ||| |||               ||||| |||| ||||| || |||    
T  22922741 tgagataattaactaattatcctccaacataaatcaattccaaaaacattgcagcggatttagttcatcaacataattaagtcttggcacgcaggcttca 22922642  T
Q  228 tcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaa 279  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  22922641 tcaaaacatctcagaaatcagttaaacaacttaatcattt-aaactcataaa 22922591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 46 - 180
Target Start/End: Original strand, 22236792 - 22236921
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||       |||||||||||||||||||||||||||    
T  22236792 ttgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagtattcaacacataaaca------gaatgctacacttcataaaatcataaa 22236885  T
Q  145 tgagataattaattaattatccttcaacataaatca 180  Q
     ||||||||||| |||||||||||| ||||||||||    
T  22236886 cgagataattaactaattatccttcgacataaatca 22236921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 46 - 197
Target Start/End: Complemental strand, 35983169 - 35983024
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || ||||||||||||||||||||| ||||||||| ||| || |||||||      ||||||||||||||  |||||||||||    
T  35983169 ttgtaacaccccgttttcccaacttaaaaatttcaaacatattatcagagtaatcagcatataaacg------gaatgctacacttctaaaaatcataaa 35983076  T
Q  145 tgagataattaattaattatccttcaacataaatcaattccaagacattgcag 197  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||||||    
T  35983075 tgagataattaactaattatccttcaacataattcaattccaa-acattgcag 35983024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 19208364 - 19208489
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||      |||| ||||||||||||||| ||||||||||||    
T  19208364 ttgtaacaccccgtttttccaacttaaaaatttcataacatttatcagagtattcaacaca------taaatggaatgctacacttcttaaaatcataaa 19208457  T
Q  145 tgagataattaattaattatccttcaacataa 176  Q
     ||||||| |||| | ||||||||||||||||    
T  19208458 agagataaataataatttatccttcaacataa 19208489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 46 - 177
Target Start/End: Original strand, 21753219 - 21753344
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || |||||||||||||||||||||| |||||||||||| || |||||||      ||||||||||||||| |||||||||||    
T  21753219 ttgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagtattcatcatataaacg------gaatgctacacttca-aaaatcataaa 21753311  T
Q  145 tgagataattaattaattatccttcaacataaa 177  Q
    | |||||||||| ||||||||||||||| ||||    
T  21753312 taagataattaactaattatccttcaacgtaaa 21753344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 204 - 285
Target Start/End: Complemental strand, 46431547 - 46431466
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    ||||||||||| |||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  46431547 ataagttttggcacgcagacctcatcaaaacatctcataaatcagctaaacaacttaatcatttcaaactcataaaacaaat 46431466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 52928940 - 52928815
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaa-catatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||| ||||||| || |||| ||||||||||| ||| |||||||||| ||||||||||||||      |||||||||| |||  ||||||||||||    
T  52928940 tgtaacactccgttttcccaactttaaaatttcaaaacatttatcagagtaatcaacacataaacg------gaatgctacatttctaaaaatcataaat 52928847  T
Q  146 gagataattaattaattatccttcaacataaa 177  Q
    ||||||||||| ||||||||||||||||||||    
T  52928846 gagataattaactaattatccttcaacataaa 52928815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 13513218 - 13513303
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 197  Q
    ||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||| |||||||||    
T  13513218 taaacggaatgctac-cttcataaaatcataaataagataattaactaattatccttcaacataaatcaaattccaaaacattgcag 13513303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 47 - 175
Target Start/End: Complemental strand, 21897226 - 21897103
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||||||||||||||| || ||||||||||| ||||| |||||||||| ||||||||      |||||||||||||||||||  |||||||||||||    
T  21897226 tgtaacaccccgtttttccaacataaaaatttcataacatttatcagagtaatcaacaca------taaacggaatgctacactttttaaaatcataaat 21897133  T
Q  146 gagataattaattaattatccttcaacata 175  Q
    ||||||| |||  | |||||||||||||||    
T  21897132 gagataaataacaatttatccttcaacata 21897103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 49 - 180
Target Start/End: Original strand, 33680164 - 33680291
Alignment:
Q  49 taacaccccgtttttcctacttaaaaatttcaaa-catat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatg 146  Q
    |||||||||||||| || || ||||||||||||| ||||| ||||||||| ||||||||||||      ||||||||||||||||  ||| ||||||| |    
T  33680164 taacaccccgttttcccaacataaaaatttcaaaacatattatcagagtaatcaacacataaa------cggaatgctacacttctaaaagtcataaacg 33680257  T
Q  147 agataattaattaattatccttcaacataaatca 180  Q
    |||||||||| |||||||||||||||||||||||    
T  33680258 agataattaactaattatccttcaacataaatca 33680291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 12270441 - 12270554
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||      | |||||||||||||||||| |||||||||||||    
T  12270441 tgtaacaccccgttttcccaacttaaaaatttcataacatatatcagagtattcaacaca------tgaacggaatgctacacttcttaaaatcataaat 12270534  T
Q  146 gagataattaattaattatc 165  Q
       |||||||| ||||||||    
T  12270535 agaataattaactaattatc 12270554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 47 - 176
Target Start/End: Original strand, 22356682 - 22356806
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||||||| |||| || || ||||||||||| ||||| |||||||||||||||||||      |||||| ||||||||||||| |||||||||||||    
T  22356682 tgtaacaccccattttcccaacataaaaatttcataacatttatcagagtattcaacaca------taaacgaaatgctacacttcttaaaatcataaat 22356775  T
Q  146 gagataattaattaattatccttcaacataa 176  Q
    ||||||| |||  | ||||||||| ||||||    
T  22356776 gagataaataacaatttatccttcgacataa 22356806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 47 - 176
Target Start/End: Original strand, 22358368 - 22358492
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||||||| |||| || || ||||||||||| ||||| |||||||||||||||||||      |||||| ||||||||||||| |||||||||||||    
T  22358368 tgtaacaccccattttcccaacataaaaatttcataacatttatcagagtattcaacaca------taaacgaaatgctacacttcttaaaatcataaat 22358461  T
Q  146 gagataattaattaattatccttcaacataa 176  Q
    ||||||| |||  | ||||||||| ||||||    
T  22358462 gagataaataacaatttatccttcgacataa 22358492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 20247526 - 20247611
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 197  Q
    ||||||||||||||||||||| ||||| |||||| |||||||||| |||||||||||||||||||||| |||||||| |||| ||||    
T  20247526 taaacggaatgctacacttca-aaaattataaataagataattaactaattatccttcaacataaatcaaattccaaaacatagcag 20247611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 285
Target Start/End: Complemental strand, 52928761 - 52928680
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    |||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||    
T  52928761 ataagtcttggcacgcaggcctcatcaaaacatctcataaattcagttaaacaacttaatcattt-aaattcataaaacaaat 52928680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 165
Target Start/End: Complemental strand, 13213823 - 13213712
Alignment:
Q  49 taacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaatg 146  Q
    |||||||||||||| || |||||||||||||| || | |||||||||||||||||||||       |||||||||||||||||| | ||||| |||||||    
T  13213823 taacaccccgttttcccaacttaaaaatttcataataaatatcagagtattcaacacat-------aacggaatgctacacttcttaaaaataataaatg 13213731  T
Q  147 agataattaattaattatc 165  Q
    |||||||||| ||||||||    
T  13213730 agataattaactaattatc 13213712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 16369267 - 16369142
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    |||||||||||||||| || || ||||||||||| ||||  |||||||||||||||||||||      |||||||||||||||||| | ||||| |||||    
T  16369267 tgtaacaccccgttttcccaacataaaaatttcataacaattatcagagtattcaacacata------aacggaatgctacacttcttaaaaattataaa 16369174  T
Q  145 tgagataattaattaattatccttcaacataa 176  Q
    |||||||| |||  | ||||||||||||||||    
T  16369173 tgagataaataacaatttatccttcaacataa 16369142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 51325619 - 51325744
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaaca-tatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||| ||||||| || ||||||||||||||   | | |||||||||||||||||||||||      |||||||||||||||| | ||||||||||    
T  51325619 ttgtaacactccgttttcccaacttaaaaatttcatttaatttatcagagtattcaacacataaa------cggaatgctacacttcttgaaatcataaa 51325712  T
Q  145 tgagataattaattaattatccttcaacataa 176  Q
    |||||||| |||  | ||||||||||||||||    
T  51325713 tgagataaataacaatttatccttcaacataa 51325744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 285
Target Start/End: Original strand, 33680329 - 33680410
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    |||||| |||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||    
T  33680329 ataagtcttggcacgtaggcctcatcaaaacatctcataaattcagttaaacaacttaatcattt-aaattcataaaacaaat 33680410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 16757798 - 16757891
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||||||| |||| || |||||||||||||| ||||  |||||||||||||||||||      |||||||||||||||||||| |||||||||||||    
T  16757798 tgtaacaccccattttcccaacttaaaaatttcataacaattatcagagtattcaacaca------taaacggaatgctacacttcttaaaatcataaat 16757891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 35261989 - 35261865
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||| |||||||||| || || ||||||||||| ||||  ||||||||||||||||||||||| |      |||||||||||||| |||||||||||||    
T  35261989 tgtaataccccgttttcccaacataaaaatttcataacaattatcagagtattcaacacataaatg------gaatgctacacttcttaaaatcataaat 35261896  T
Q  146 gagataattaattaattatccttcaacataa 176  Q
     |||||| |||  | |||||||| |||||||    
T  35261895 tagataaataacaatttatcctttaacataa 35261865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 16698706 - 16698644
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacata-tatcagagtattcaacacataa 108  Q
    |||||||||||||||| || |||||||||||||||||||| |||||||||| |||||||||||    
T  16698706 tgtaacaccccgttttcccaacttaaaaatttcaaacatattatcagagtaatcaacacataa 16698644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19420065 - 19420110
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  19420065 tatcttgtttactgtttagtgaaatagttaatttgataatgtcctt 19420110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 43689755 - 43689819
Alignment:
Q  112 taaacggaatgctacacttcataaa-atcataaatgagataattaattaattatccttcaacata 175  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||  | |||||||||||||||    
T  43689755 taaacggaatgctacacttcataaagatcataaatgagataaataacaatttatccttcaacata 43689819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 20440082 - 20439970
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataa 143  Q
    |||||||||||||||||| || ||||||||||||||   |  || |||||||||||||||       ||||||||||||||||||||||||||||||| |    
T  20440082 tttgtaacaccccgttttcccgacttaaaaatttcatttaattaatcagagtattcaacat------gtaaacggaatgctacacttcataaaatcatta 20439989  T
Q  144 atgagataattaattaatt 162  Q
    || || ||||||| |||||    
T  20439988 ataagttaattaactaatt 20439970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 21704234 - 21704347
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataaa 144  Q
    |||||||||||||||| || || ||||||||||  ||||  ||||||||||||||||| ||||       || ||||||||||||| ||||| |||||||    
T  21704234 tgtaacaccccgttttcccaacataaaaatttcttaacaattatcagagtattcaacaaataa-------cgaaatgctacacttcttaaaaatcataaa 21704326  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  21704327 tgagataattaactaattatc 21704347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 21709330 - 21709388
Alignment:
Q  207 agttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 265  Q
    |||||||| ||||| |||||||||| || ||||||||||||||||||||||| ||||||    
T  21709330 agttttggcacgcaggcctcatcaagacgtctcataaatcagttaaacaactgaatcat 21709388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 21713873 - 21713931
Alignment:
Q  207 agttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 265  Q
    |||||||| ||||| |||||||||| || ||||||||||||||||||||||| ||||||    
T  21713873 agttttggcacgcaggcctcatcaagacgtctcataaatcagttaaacaactgaatcat 21713931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 40388355 - 40388468
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataaa 144  Q
    |||||||||||||||| || || ||||||||||| || |  |||||||||||||| |||||||       |||||||||||||||| ||||| | |||||    
T  40388355 tgtaacaccccgttttcccaacataaaaatttcataataattatcagagtattcagcacataa-------cggaatgctacacttcttaaaaataataaa 40388447  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  40388448 tgagataattaactaattatc 40388468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 21897061 - 21897000
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatca 264  Q
    |||||| |||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  21897061 ataagtcttggcacgtaggcctcatcaaaacatctcataaattcagttaaacaacttaatca 21897000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40769079 - 40769124
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||    
T  40769079 tatcttgtttactgtttagtgaaatagttaatttgataacgtcctt 40769124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 49542699 - 49542744
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||    
T  49542699 tatcttgtttactgtttagtgaaatagttaatttgataacgtcctt 49542744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 50211155 - 50211030
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacata-tatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || |||||||||||||||||||| ||||| ||||   |||||   ||| ||||||||||   ||||||| ||||||||||||     
T  50211155 tgtaacaccccgttttcccaacttaaaaatttcaaacatattatcaaagta--aaacac---aacataaacggaatatcacacttcttaaaatcataaaa 50211061  T
Q  146 gagataattaattaattatccttcaacataa 176  Q
     ||||||||||  ||||||| |||| |||||    
T  50211060 cagataattaacaaattatctttcagcataa 50211030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 22450164 - 22450041
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || |  ||||||||||||||||||| |||||||| ||| || ||||       ||||||||||||||||  ||| |||||||     
T  22450164 tgtaacaccccgttttcccaatataaaaatttcaaacatataatcagagtaatcatcaaataa-------cggaatgctacacttctaaaagtcataaaa 22450072  T
Q  146 gagataattaattaattatccttcaacataa 176  Q
     ||||||||||  ||||||| ||||||||||    
T  22450071 cagataattaacaaattatctttcaacataa 22450041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 176
Target Start/End: Original strand, 26064104 - 26064229
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    |||||||||| |||||  | || ||||||||||| ||||  |||||||||||||||||||      |||||||| ||||||||||| | |||||||||||    
T  26064104 tgtaacacccagttttctcaacataaaaatttcataacaattatcagagtattcaacaca------taaacggagtgctacacttcttaaaaatcataaa 26064197  T
Q  145 tgagataattaattaattatccttcaacataa 176  Q
    |||||||| |||  | |||||| |||||||||    
T  26064198 tgagataaataacaatttatccctcaacataa 26064229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 152
Target Start/End: Complemental strand, 20272215 - 20272111
Alignment:
Q  44 ctttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagta-ttcaacacataaacgtaaacggaatgctacacttcataaaatcat 141  Q
    |||||||||||||||||||||| || ||||||||||| || |  |||||||||| |||||||||      |||| |||||| ||||||||  ||||||||    
T  20272215 ctttgtaacaccccgtttttccaacataaaaatttcataataattatcagagtatttcaacaca------taaatggaatgttacacttctaaaaatcat 20272122  T
Q  142 aaatgagataa 152  Q
    |||||||||||    
T  20272121 aaatgagataa 20272111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 8881652 - 8881710
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttc 169  Q
    ||||||||||||||||||||  |||| |||||||||| |||||||| ||||||||||||    
T  8881652 taaacggaatgctacacttctcaaaaatcataaatgaaataattaactaattatccttc 8881710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 22356329 - 22356279
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  22356329 tgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagta 22356279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 22358015 - 22357965
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  22358015 tgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagta 22357965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16861723 - 16861678
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    |||||| |||||| ||||||||||||||||||||||||| ||||||    
T  16861723 tatcttatttactgtttagtgaaatagttaatttgataaagtcctt 16861678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 21160943 - 21160999
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagtattca 100  Q
    ||||||||||||||||| || |||||||||||||  ||||| |||||||||||||||    
T  21160943 ttgtaacaccccgttttcccaacttaaaaatttcataaacaaatatcagagtattca 21160999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 20848062 - 20847948
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca--aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaa-atcataa 143  Q
    |||||||||||||||| || ||||||||||||||  ||||| ||||||||||   |||| ||||       ||||||||||||||||  ||| || ||||    
T  20848062 tgtaacaccccgttttcccaacttaaaaatttcataaacatttatcagagtaaataacatataa-------cggaatgctacacttctaaaatataataa 20847970  T
Q  144 atgagataattaattaattatc 165  Q
    ||||||||||||| ||||||||    
T  20847969 atgagataattaactaattatc 20847948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 20915454 - 20915568
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca--aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaa-atcataa 143  Q
    ||||||||||| |||| || ||||||||||||||  ||||| ||||||||||  ||||| ||||       ||||||||||||||||  ||| || ||||    
T  20915454 tgtaacaccccattttcccaacttaaaaatttcataaacatttatcagagtaaacaacatataa-------cggaatgctacacttctaaaatataataa 20915546  T
Q  144 atgagataattaattaattatc 165  Q
    ||||||||||||| ||||||||    
T  20915547 atgagataattaactaattatc 20915568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 50615092 - 50614967
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    |||||||||||||||| || || ||||||||||| || | || |||||||||||| ||||      ||||||||||||| |||||| | |||||||||||    
T  50615092 tgtaacaccccgttttcccaacataaaaatttcataataaatttcagagtattcatcaca------taaacggaatgctgcacttcttgaaaatcataaa 50614999  T
Q  145 tgagataattaattaattatccttcaacataa 176  Q
    ||  |||| |||  | ||||||||||||||||    
T  50614998 tggaataaataacaatttatccttcaacataa 50614967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 50622920 - 50622795
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    |||||||||||||||| || || ||||||||||| || | || |||||||||||| ||||      ||||||||||||| |||||| | |||||||||||    
T  50622920 tgtaacaccccgttttcccaacataaaaatttcataataaatttcagagtattcatcaca------taaacggaatgctgcacttcttgaaaatcataaa 50622827  T
Q  145 tgagataattaattaattatccttcaacataa 176  Q
    ||  |||| |||  | ||||||||||||||||    
T  50622826 tggaataaataacaatttatccttcaacataa 50622795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 22236965 - 22237038
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    |||||||| | |||||||| ||| |||||||||| ||||||||||||||| ||||||| ||| |||||||||||||    
T  22236965 ttggtacgtaggcctcatcgaaatatctcataaattcagttaaacaactt-atcattt-aaattcataaaacaaat 22237038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 41229907 - 41229958
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    ||||||||||||||||||| || ||||||||||| | ||| |||||||||||    
T  41229907 tgtaacaccccgtttttccgacataaaaatttcacatataaatcagagtatt 41229958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 46199629 - 46199562
Alignment:
Q  109 acgtaaacggaatgctacacttcat-----aaaatcataaatgagataattaattaattatccttcaa 171  Q
    ||||||||||||||||||||||| |     |||||||||||||  |||||||| ||||||||||||||    
T  46199629 acgtaaacggaatgctacacttcttttcctaaaatcataaatggaataattaactaattatccttcaa 46199562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 34508956 - 34509006
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacata-tatcagagta 96  Q
    |||||||||||||||| || ||||||||| |||||||||| ||||||||||    
T  34508956 tgtaacaccccgttttcccaacttaaaaagttcaaacatattatcagagta 34509006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 12204462 - 12204494
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaa 144  Q
    |||||||||||||||||||| ||||||||||||    
T  12204462 taaacggaatgctacacttcttaaaatcataaa 12204494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 20134369 - 20134405
Alignment:
Q  48 gtaacaccccgtttttcctacttaaaaatttcaaaca 84  Q
    ||||||||||||||| || ||||||||||||||||||    
T  20134369 gtaacaccccgttttcccaacttaaaaatttcaaaca 20134405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 21302473 - 21302422
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagta 96  Q
    |||||||||||||||| || |||||||||||||  |||||| ||||||||||    
T  21302473 tgtaacaccccgttttcccaacttaaaaatttcataaacatttatcagagta 21302422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 21753390 - 21753450
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcataaat-cagttaaacaacttaatcat 265  Q
    ||||||||| ||||| ||||| ||||||||| |||| ||| |||| |||||||||||||||    
T  21753390 aagttttggcacgcaggcctcgtcaaaacatgtcatgaattcagtcaaacaacttaatcat 21753450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 22359479 - 22359419
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||| |||| ||||| |||||||||||| |||||||||| |||||| ||||||||| ||||    
T  22359479 aagtcttggcacgcaggcctcatcaaaatatctcataaattcagttgaacaacttattcat 22359419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 23081052 - 23080997
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagtattca 100  Q
    |||||||||||||||| ||  ||||||||||||  |||||| ||||||||||||||    
T  23081052 tgtaacaccccgttttcccagcttaaaaatttcataaacatttatcagagtattca 23080997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 25264163 - 25264111
Alignment:
Q  120 atgctacacttcataa-aatcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||| ||| |||||||||||  |||||||| ||||||||||||||    
T  25264163 atgctacacttcttaagaatcataaatggaataattaactaattatccttcaa 25264111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 27240711 - 27240660
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagta 96  Q
    |||||||||||||||| || |||||||||||||  |||||| ||||||||||    
T  27240711 tgtaacaccccgttttcccaacttaaaaatttcataaacatttatcagagta 27240660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 3e-63; HSPs: 58)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 47 - 285
Target Start/End: Complemental strand, 27334090 - 27333843
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatg 146  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||      ||||||||||||||||||||||||||    
T  27334090 tgtaacaccccgttttcccaacttaaaaatttcaaacatatatcagagtattcaacacataaacgaaa------tgctacacttcataaaatcataaatg 27333997  T
Q  147 agataattaattaattatccttcaacataaatcaattccaagacattgcagggaatt----------------ataagttttggtacgcatgcctcatca 230  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||| ||| | |||                |||||| |||| ||||| |||||||||    
T  27333996 agataattaactaattatccttcaacataaatcaattccaaaacattacagcggattaaattcatcaacaaaaataagtcttggcacgcaggcctcatca 27333897  T
Q  231 aaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  27333896 aaacatctcctaaatcagttaaacaacttaatcattt-aaactcataaaacaaat 27333843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 47 - 285
Target Start/End: Complemental strand, 27394830 - 27394583
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatg 146  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||      ||||||||||||||||||||||||||    
T  27394830 tgtaacaccccgttttcccaacttaaaaatttcaaacatatatcagagtattcaacacataaacgaaa------tgctacacttcataaaatcataaatg 27394737  T
Q  147 agataattaattaattatccttcaacataaatcaattccaagacattgcagggaatt----------------ataagttttggtacgcatgcctcatca 230  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||| ||| | |||                |||||| |||| ||||| |||||||||    
T  27394736 agataattaactaattatccttcaacataaatcaattccaaaacattacagcggattaaattcatcaacaaaaataagtcttggcacgcaggcctcatca 27394637  T
Q  231 aaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  27394636 aaacatctcctaaatcagttaaacaacttaatcattt-aaactcataaaacaaat 27394583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 46 - 187
Target Start/End: Complemental strand, 25957940 - 25957805
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||      ||||||||||||||||||||||||||||    
T  25957940 ttgtaacaccccgttttcccaacttaaaaatttcaaacatatatcagagtattcaacatataaacg------gaatgctacacttcataaaatcataaat 25957847  T
Q  146 gagataattaattaattatccttcaacataaatcaattccaa 187  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  25957846 gagataattaactaattatccttcaacataaatcaattccaa 25957805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 46 - 187
Target Start/End: Complemental strand, 25965987 - 25965852
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| |||||||      ||||||||||||||||||||||||||||    
T  25965987 ttgtaacaccccgttttcccaacttaaaaatttcaaacatatatcagaatattcaacatataaacg------gaatgctacacttcataaaatcataaat 25965894  T
Q  146 gagataattaattaattatccttcaacataaatcaattccaa 187  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  25965893 gagataattaactaattatccttcaacataaatcaattccaa 25965852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 47 - 173
Target Start/End: Complemental strand, 22081692 - 22081571
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatg 146  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||     ||||||||||||||||||||||||||||||||||    
T  22081692 tgtaacaccccgtttttccaacttaaaaatttcaaacatatatcagagtattcaccgcata-----aaacggaatgctacacttcataaaatcataaatg 22081598  T
Q  147 agataattaattaattatccttcaaca 173  Q
    ||||||||||  ||||||| |||||||    
T  22081597 agataattaacaaattatctttcaaca 22081571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 197
Target Start/End: Original strand, 19651368 - 19651513
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||||||  ||||||| |||||||||||||||||||||| |||||||||||| ||  ||||    ||||||||||||||||||| ||||||||||||    
T  19651368 tgtaacaccctatttttccaacttaaaaatttcaaacatataatcagagtattcatca--taaa----aacggaatgctacacttca-aaaatcataaat 19651460  T
Q  146 gagataattaattaattatccttcaacataaatc-aattccaagacattgcag 197  Q
     |||||||||| |||||||| | ||||||||||| |||||||| |||||||||    
T  19651461 aagataattaactaattatcttccaacataaatcaaattccaaaacattgcag 19651513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 176
Target Start/End: Original strand, 24265630 - 24265754
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||| ||||||||  | || ||||||||||| ||||| |||||||||||||||||||||||      |||||||||||||||| |||||||||||||    
T  24265630 tgtaacatcccgttttctcaacataaaaatttcataacatttatcagagtattcaacacataaa------cggaatgctacacttcttaaaatcataaat 24265723  T
Q  146 gagataattaattaattatccttcaacataa 176  Q
    ||||||| |||| | ||||||||||||||||    
T  24265724 gagataaataataatttatccttcaacataa 24265754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 8230541 - 8230428
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    |||||||||||||||| || |||||||||||||| |||| |||||||||||||||||||||       |||||||||||||||||| | |||||||||||    
T  8230541 tgtaacaccccgttttcccaacttaaaaatttcataacaaatatcagagtattcaacacat-------aacggaatgctacacttcttaaaaatcataaa 8230449  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  8230448 tgagataattaactaattatc 8230428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 47 - 178
Target Start/End: Original strand, 13018640 - 13018767
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    |||||||||||||||| || |||||||||||||| ||||| |||||||||||||||||||      ||||| |||||||||||||| | |||||||||||    
T  13018640 tgtaacaccccgttttcccaacttaaaaatttcataacatttatcagagtattcaacaca------taaacagaatgctacacttcttaaaaatcataaa 13018733  T
Q  145 tgagataattaattaattatccttcaacataaat 178  Q
    |||||||| |||  | ||||||||||||||||||    
T  13018734 tgagataaataacaatttatccttcaacataaat 13018767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 25643472 - 25643601
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatca-taaa 144  Q
    |||||||||||||||| || |||||||||||||| |||| ||||||||||||||| ||||      ||||||||||| ||||| || |||||||| ||||    
T  25643472 tgtaacaccccgttttcccaacttaaaaatttcataacaaatatcagagtattcagcaca------taaacggaatgttacacatcttaaaatcagtaaa 25643565  T
Q  145 tgagataattaattaattatccttcaacataaatca 180  Q
    |||||||||||| |||||||||||| |||| |||||    
T  25643566 tgagataattaactaattatccttcgacatgaatca 25643601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 171
Target Start/End: Original strand, 23018546 - 23018666
Alignment:
Q  47 tgtaacaccccgttttt-cctacttaaaaatttcaaa-catatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || || ||||||||||||| ||| |||||||||| |||||||||| | |      ||||||||||||||| |||||||||||    
T  23018546 tgtaacaccccgttttttccaacataaaaatttcaaaacatttatcagagtaatcaacacatatatg------gaatgctacacttcaaaaaatcataaa 23018639  T
Q  145 tgagataattaattaattatccttcaa 171  Q
    |||||||||||| ||||||||||||||    
T  23018640 tgagataattaactaattatccttcaa 23018666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 9101542 - 9101419
Alignment:
Q  48 gtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatg 146  Q
    ||||||||||||||| || |||||||||||||| |||||||||||||||| |||||| |      ||| |||||||||||||||| |||||||| |||||    
T  9101542 gtaacaccccgttttcccaacttaaaaatttcataacatatatcagagtaatcaacata------taagcggaatgctacacttcttaaaatcaaaaatg 9101449  T
Q  147 agataattaattaattatccttcaacataa 176  Q
    |||||| |||  | ||||||||||||||||    
T  9101448 agataaataacaatttatccttcaacataa 9101419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 44 - 165
Target Start/End: Original strand, 16015794 - 16015910
Alignment:
Q  44 ctttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcat 141  Q
    ||||||||||||||||||| || |||||||||||||| |||| |||||||||||||||||||||       ||| ||||| |||||||| | ||||||||    
T  16015794 ctttgtaacaccccgttttcccaacttaaaaatttcataacaaatatcagagtattcaacacat-------aactgaatgttacacttcttaaaaatcat 16015886  T
Q  142 aaatgagataattaattaattatc 165  Q
    ||||||||||||||| ||||||||    
T  16015887 aaatgagataattaactaattatc 16015910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 49 - 176
Target Start/End: Complemental strand, 19954497 - 19954376
Alignment:
Q  49 taacaccccgtttttcctacttaaaaatttcaaacata-tatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatga 147  Q
    |||||||||||||| || |||||||||||||||||||| |||||||||| ||| ||||      ||||||||||||||||| || |||||||||||||||    
T  19954497 taacaccccgttttcccaacttaaaaatttcaaacatattatcagagtaatcagcaca------taaacggaatgctacacgtcttaaaatcataaatga 19954404  T
Q  148 gataattaattaattatccttcaacataa 176  Q
    ||||| |||  ||||||| ||||||||||    
T  19954403 gataaataa-caattatctttcaacataa 19954376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 1642797 - 1642920
Alignment:
Q  48 gtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatg 146  Q
    ||||||||||||||| || || ||||||||||| ||||| |||||||||| || |||||||||      |||||||||||||||| ||||||||||||||    
T  1642797 gtaacaccccgttttcccaacataaaaatttcataacatttatcagagtactccacacataaa------cggaatgctacacttcttaaaatcataaatg 1642890  T
Q  147 agataattaattaattatccttcaacataa 176  Q
    |||||| |||    ||||||||||||||||    
T  1642891 agataaataacattttatccttcaacataa 1642920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 175
Target Start/End: Original strand, 20108280 - 20108407
Alignment:
Q  43 cctttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcat 141  Q
    ||||| |||||||||||||| || |||||||||||||| ||||| |||||||||| ||||||||      |||||||||||||||| ||| ||||| |||    
T  20108280 cctttctaacaccccgttttcccaacttaaaaatttcataacatttatcagagtaatcaacaca------taaacggaatgctacatttcttaaaaacat 20108373  T
Q  142 aaatgagataattaattaattatccttcaacata 175  Q
    ||||| ||||| |||  | |||||||||||||||    
T  20108374 aaatgggataaataacaatttatccttcaacata 20108407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 165
Target Start/End: Original strand, 16493518 - 16493634
Alignment:
Q  43 cctttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcat 141  Q
    |||||||||||||||||||| || || ||||||||   |||| |||||||||||||||||||||       ||||||||| |||||||| | ||||||||    
T  16493518 cctttgtaacaccccgttttcccaacataaaaattcataacaaatatcagagtattcaacacat-------aacggaatgatacacttcttaaaaatcat 16493610  T
Q  142 aaatgagataattaattaattatc 165  Q
    ||||||||||||||| ||||||||    
T  16493611 aaatgagataattaactaattatc 16493634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 12940372 - 12940496
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || ||||||||||||||   |  || |||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  12940372 tgtaacaccccgttttcccgacttaaaaatttcatttaattaatcagagtattcaacat------gtaaacggaatgctacacttcataaaatcataaat 12940465  T
Q  146 gagataattaattaa-ttatccttcaacata 175  Q
     || ||||||| ||| |||||||||||||||    
T  12940466 aagttaattaactaatttatccttcaacata 12940496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 179
Target Start/End: Original strand, 20592986 - 20593116
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacata-tatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || |||||||||||||||||||| |||||||||    || ||||  || ||||||| ||   ||||||| ||||||||||||     
T  20592986 tgtaacaccccgttttcccaacttaaaaatttcaaacatattatcagagt----aaaacat-cacataaacgggatatcacacttcttaaaatcataaaa 20593080  T
Q  146 gagataattaattaattatcct--tcaacataaatc 179  Q
    ||||||||||| ||||||||||  ||||||||||||    
T  20593081 gagataattaactaattatcctcgtcaacataaatc 20593116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 25630122 - 25630063
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 265  Q
    |||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  25630122 aagtcttggcacgcaggcctcatcaaaacatctcaaaaatcagttaaacaacttaatcat 25630063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 163
Target Start/End: Complemental strand, 16449489 - 16449378
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    |||||||||||||||| || |||||||||||||| || |  ||||||||||||||||||||       |||||||| ||||||||| | ||||| |||||    
T  16449489 tgtaacaccccgttttcccaacttaaaaatttcataataattatcagagtattcaacacat-------aacggaatactacacttcttaaaaataataaa 16449397  T
Q  145 tgagataattaattaatta 163  Q
    |||||||||||| ||||||    
T  16449396 tgagataattaactaatta 16449378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 176
Target Start/End: Original strand, 19667548 - 19667649
Alignment:
Q  70 taaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatgagataattaattaattatcctt 168  Q
    ||||||||||| ||||| |||||||||||||||||||||||      ||||||| || ||||| ||||||||||||||| |||| |||  | ||||||||    
T  19667548 taaaaatttcataacatttatcagagtattcaacacataaa------cggaatgttatacttcttaaaatcataaatgaaataaataacaatttatcctt 19667641  T
Q  169 caacataa 176  Q
    ||||||||    
T  19667642 caacataa 19667649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 28291823 - 28291698
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || ||||||||||||||   |  || |||||||||||||||       ||||||||||||||||||||||||||||| ||||    
T  28291823 ttgtaacaccccgttttcccgacttaaaaatttcatttaattaatcagagtattcaacat------gtaaacggaatgctacacttcataaaatcgtaaa 28291730  T
Q  145 tgagataattaattaa-ttatccttcaacata 175  Q
    | || ||||||| ||| ||||||||| |||||    
T  28291729 taagttaattaactaatttatccttcgacata 28291698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 20108449 - 20108511
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaa--tcagttaaacaacttaatca 264  Q
    ||||||||||| ||| | |||||||||||||||||||||||  ||||||||||||||||||||    
T  20108449 ataagttttggcacgtaggcctcatcaaaacatctcataaaattcagttaaacaacttaatca 20108511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 17230629 - 17230564
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacg 111  Q
    |||||||||||||||||| || || ||||||||||| | ||| ||||||||||||||||||||||||    
T  17230629 tttgtaacaccccgttttcccaacataaaaatttcacatata-atcagagtattcaacacataaacg 17230564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 23535356 - 23535302
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 165  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  23535356 taaacggaatgctacacttcttaaaaatcataaatgagataattaactaattatc 23535302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 18318484 - 18318537
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatc 165  Q
    ||||||||||||||||||||  |||||| |||||||||||||||| ||||||||    
T  18318484 taaacggaatgctacacttctaaaaatcgtaaatgagataattaactaattatc 18318537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 18321884 - 18321937
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatc 165  Q
    ||||||||||||||||||||  |||||| |||||||||||||||| ||||||||    
T  18321884 taaacggaatgctacacttctaaaaatcgtaaatgagataattaactaattatc 18321937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 109
Target Start/End: Original strand, 25687726 - 25687791
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtat-tcaacacataaa 109  Q
    ||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||| ||||||||    
T  25687726 ttgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagtatatcatcacataaa 25687791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 109
Target Start/End: Original strand, 25690273 - 25690338
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtat-tcaacacataaa 109  Q
    ||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||| ||||||||    
T  25690273 ttgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagtatatcatcacataaa 25690338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 109
Target Start/End: Original strand, 25697066 - 25697131
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtat-tcaacacataaa 109  Q
    ||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||| ||||||||    
T  25697066 ttgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagtatatcatcacataaa 25697131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 109
Target Start/End: Original strand, 25721946 - 25722011
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtat-tcaacacataaa 109  Q
    ||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||| ||||||||    
T  25721946 ttgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagtatatcatcacataaa 25722011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 20075868 - 20075984
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacata-tatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||||||||||||||| |||| |||||| |||||||| |||||||||    || ||||  || ||||||| ||   ||||||| ||||||||||||     
T  20075868 tgtaacaccccgtttttccaactttaaaattccaaacatattatcagagt----aaaacat-cacataaacgggatatcacacttcttaaaatcataaaa 20075962  T
Q  146 gagataattaattaattatcct 167  Q
    ||||||||||| ||||||||||    
T  20075963 gagataattaactaattatcct 20075984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 16921554 - 16921503
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    ||||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  16921554 ttgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagta 16921503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 18404127 - 18404003
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca--aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataa 143  Q
    ||||||||||||||||| || |||||||||||| |  ||||| ||||||||||  ||||| ||||       | |||||||||||||| |||||||||||    
T  18404127 ttgtaacaccccgttttcccaacttaaaaattttataaacatttatcagagtaaacaacatataa-------cagaatgctacacttc-taaaatcataa 18404036  T
Q  144 atgagataattaattaattatccttcaacataa 176  Q
    |  ||||||||||  ||||||| ||||||||||    
T  18404035 aacagataattaacaaattatctttcaacataa 18404003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 22804390 - 22804441
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    ||||||||||||||||||| |||||||||||||| | ||| |||||||||||    
T  22804390 tgtaacaccccgtttttccaacttaaaaatttcacatataaatcagagtatt 22804441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 22781091 - 22781041
Alignment:
Q  125 acacttcataaaatcataaatgagataattaattaattatccttcaacata 175  Q
    ||||||| ||||||||||||||||||||||||  ||||||| |||||||||    
T  22781091 acacttcttaaaatcataaatgagataattaacaaattatctttcaacata 22781041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 29059724 - 29059774
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacata-tatcagagta 96  Q
    ||||||||||||||||| | |||||||||||||||||||| ||||||||||    
T  29059724 tgtaacaccccgttttttcaacttaaaaatttcaaacatattatcagagta 29059774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 35244775 - 35244825
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  35244775 tgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagta 35244825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 19398796 - 19398837
Alignment:
Q  39 atgtcctttgtaacaccccgtttttcctacttaaaaatttca 80  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  19398796 atgtcctttgtaacaccccgttttcccaacttaaaaatttca 19398837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 19104310 - 19104258
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    ||||||||||||||||| || |||||||||||||| | ||| |||||||||||    
T  19104310 ttgtaacaccccgttttcccaacttaaaaatttcacatataaatcagagtatt 19104258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 15706877 - 15706826
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    |||||||||||||||| || |||||||||||||| | ||| |||||||||||    
T  15706877 tgtaacaccccgttttcccaacttaaaaatttcacatataaatcagagtatt 15706826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 265
Target Start/End: Original strand, 19651543 - 19651598
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||| ||||| |||||||||||| |||||||||| ||||| |||||||||||||||    
T  19651543 ttggcacgcaggcctcatcaaaatatctcataaattcagtcaaacaacttaatcat 19651598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 27574212 - 27574149
Alignment:
Q  109 acgtaaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaa 171  Q
    ||||||||||||||||||||||| | ||||||||||| |  |||||||| ||||||||| ||||    
T  27574212 acgtaaacggaatgctacacttcttaaaaatcataaacggaataattaactaattatccatcaa 27574149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 4644727 - 4644673
Alignment:
Q  112 taaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatc 165  Q
    |||||||||||||||||||| | |||||| ||||||| |||||||| ||||||||    
T  4644727 taaacggaatgctacacttcttaaaaatcttaaatgatataattaactaattatc 4644673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 20639144 - 20639094
Alignment:
Q  125 acacttcataaaatcataaatgagataattaattaattatccttcaacata 175  Q
    ||||||| |||||||||| |||||||||||||  ||||||| |||||||||    
T  20639144 acacttcttaaaatcatatatgagataattaacaaattatctttcaacata 20639094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 28497400 - 28497350
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    ||||||| |||||||| || ||||||||||||||||||||| |||||||||    
T  28497400 tgtaacatcccgttttcccaacttaaaaatttcaaacatataatcagagta 28497350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 29809811 - 29809761
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    ||||||| |||||||| || ||||||||||||||||||||| |||||||||    
T  29809811 tgtaacatcccgttttcccaacttaaaaatttcaaacatataatcagagta 29809761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 80
Target Start/End: Complemental strand, 18897289 - 18897256
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca 80  Q
    ||||||||||||||||||| ||||||||||||||    
T  18897289 tgtaacaccccgtttttccaacttaaaaatttca 18897256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 25604325 - 25604284
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata 88  Q
    |||||||||||||||| || |||| |||||||||||||||||    
T  25604325 tgtaacaccccgttttcccaactttaaaatttcaaacatata 25604284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 25612663 - 25612622
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata 88  Q
    |||||||||||||||| || |||| |||||||||||||||||    
T  25612663 tgtaacaccccgttttcccaactttaaaatttcaaacatata 25612622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 15688757 - 15688697
Alignment:
Q  112 taaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||||||||||| | ||||| ||||||   |||||||| ||||||||||||||    
T  15688757 taaacggaatgctacacttcttaaaaattataaatagaataattaactaattatccttcaa 15688697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 17201404 - 17201352
Alignment:
Q  114 aacggaatgctacacttcataaa-atcataaatgagataattaattaattatc 165  Q
    ||||||||||||||||||  ||| || ||||||||||||||||| ||||||||    
T  17201404 aacggaatgctacacttctaaaatataataaatgagataattaactaattatc 17201352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 22081507 - 22081463
Alignment:
Q  222 gcctcatcaaaacatctcat-aaatcagttaaacaacttaatcat 265  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||    
T  22081507 gcctcatcaaaacatctcataaaatcagtcaaacatcttaatcat 22081463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 23084019 - 23083967
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    ||||||||||||||||| || |||| ||||||||| | ||| |||||||||||    
T  23084019 ttgtaacaccccgttttcccaacttgaaaatttcacatataaatcagagtatt 23083967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 28497243 - 28497183
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcataa-atcagttaaacaacttaatcat 265  Q
    |||| |||| ||||| |||||||||||||||||| |||  |||||||||||||||| ||||    
T  28497243 aagtcttggcacgcaggcctcatcaaaacatctcttaagttcagttaaacaacttattcat 28497183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 29809654 - 29809594
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcataa-atcagttaaacaacttaatcat 265  Q
    |||| |||| ||||| |||||||||||||||||| |||  |||||||||||||||| ||||    
T  29809654 aagtcttggcacgcaggcctcatcaaaacatctcttaagttcagttaaacaacttattcat 29809594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 35137624 - 35137688
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 175  Q
    ||||||||||| || |||||||||||||| |||| ||  |||||| ||| |||||||||||||||    
T  35137624 taaacggaatgttaaacttcataaaatcaaaaataagtcaattaactaatttatccttcaacata 35137688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 5e-59; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 46 - 285
Target Start/End: Complemental strand, 38856176 - 38855928
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||||| | ||||| || |||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||    
T  38856176 ttgtaacactctgttttcccaacttaaaaatttcaaacatatatcagagtattcaacacataaacg------gaatgctacacttcataaaatcataaat 38856083  T
Q  146 gagataattaattaattatccttcaacataaatcaattccaagacattgcagggaatt----------------ataagttttggtacgcatgcctcatc 229  Q
     |||||||||| ||||||||||||||||| |||||||||||| ||||||||| | |||                |||||| |||| ||||| ||||||||    
T  38856082 aagataattaactaattatccttcaacattaatcaattccaaaacattgcagcggattaaattcatcaacataaataagtcttggcacgcaggcctcatc 38855983  T
Q  230 aaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  38855982 aaaacatctcataaatcagttaaacaacttaatcattt-aaaatcataaaacaaat 38855928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 6518660 - 6518783
Alignment:
Q  46 ttgtaacaccccgtttttccta-cttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    |||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||| |||||||||||    
T  6518660 ttgtaacaccccatttttcccaacttaaaaatttcaaacatatatcagagtattcaacaca--------aacggaatgctacacttcacaaaatcataaa 6518751  T
Q  145 tgagataattaattaattatccttcaacataa 176  Q
    | |||||||||| |||||||||||||||||||    
T  6518752 taagataattaactaattatccttcaacataa 6518783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 21672805 - 21672930
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacata-tatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||      ||||||||||||||||||||  ||| |||||||    
T  21672805 ttgtaacaccccgttttcccaacttaaaaatttcaaacatattatcagagtattcaacaca------taaacggaatgctacacttctaaaagtcataaa 21672898  T
Q  145 tgagataattaattaattatccttcaacataa 176  Q
    || ||||||||| |||| ||||||| ||||||    
T  21672899 tgcgataattaactaatcatccttccacataa 21672930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 46 - 145
Target Start/End: Original strand, 6519722 - 6519816
Alignment:
Q  46 ttgtaacaccccgtttttccta-cttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||| |||||||||||    
T  6519722 ttgtaacaccccgtttttcccaacttaaaaatttcaaacatatatcagagtattcaacaca------taaacggaatgctacacttcacaaaatcataaa 6519815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 23761808 - 23761680
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||| ||||||| || |  || ||||||||||||||| |||||||||||||||  |||||||      ||||||||||||||  ||| ||||||||    
T  23761808 tgtaacactccgttttcccaatatataaatttcaaacatattatcagagtattcaacgtataaacg------gaatgctacacttctaaaagtcataaat 23761715  T
Q  146 gagataattaattaattatccttcaacataaatca 180  Q
    ||||||||||| |||||||||||||||||||||||    
T  23761714 gagataattaactaattatccttcaacataaatca 23761680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 164
Target Start/End: Original strand, 21668088 - 21668200
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacata-tatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||   ||   ||||| ||||||||  ||| ||||||||    
T  21668088 tgtaacaccccgttttcccaacttaaaaatttcaaacatattatcagagtattcaacacataaa---aa---gaatgttacacttctaaaagtcataaat 21668181  T
Q  146 gagataattaattaattat 164  Q
    ||||||||||| |||||||    
T  21668182 gagataattaactaattat 21668200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 211 - 282
Target Start/End: Original strand, 21672978 - 21673049
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaaca 282  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  21672978 ttggcacgcaggcctcatcaaaacatctcataaatcagttcaacaacttaatcatttaaaattcataaaaca 21673049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 20493415 - 20493538
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||||||||||||||| || ||||||||||| || |  |||||||||| |||| |||||||      |||||||||||||||| |||||||||||||    
T  20493415 tgtaacaccccgtttttccgacataaaaatttcataataattatcagagtaatcaatacataaa------cggaatgctacacttcttaaaatcataaat 20493508  T
Q  146 gagataattaattaattatccttcaacata 175  Q
    ||||||| |||  | |||||||||||||||    
T  20493509 gagataaataacaatttatccttcaacata 20493538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 41597310 - 41597423
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataaa 144  Q
    |||||||||||||||| || || ||||||||||| ||||  ||||||||||||||||||||||       |||||||||||||||| ||||| |||||||    
T  41597310 tgtaacaccccgttttcccaacataaaaatttcataacaattatcagagtattcaacacataa-------cggaatgctacacttcttaaaaatcataaa 41597402  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  41597403 tgagataattaactaattatc 41597423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 45291722 - 45291609
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataaa 144  Q
    |||||||||||||||| || || ||||||||||| ||||  ||||||||||||||||||||||       |||||||||||||||| ||||| |||||||    
T  45291722 tgtaacaccccgttttcccaacataaaaatttcataacaattatcagagtattcaacacataa-------cggaatgctacacttcttaaaaatcataaa 45291630  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  45291629 tgagataattaactaattatc 45291609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 22964929 - 22965041
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || |||||||||||||| |||| |||||||||||||| ||||||       ||||||||||||||||    ||||||||||||    
T  22964929 tgtaacaccccgttttcccaacttaaaaatttcataacaaatatcagagtattcgacacat-------aacggaatgctacactcttaaaaatcataaat 22965021  T
Q  146 gagataattaattaattatc 165  Q
    ||||||||||| ||||||||    
T  22965022 gagataattaactaattatc 22965041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 362418 - 362543
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || ||||||||||||||   |  || |||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  362418 ttgtaacaccccgttttcccgacttaaaaatttcatttaattaatcagagtattcaacat------gtaaacggaatgctacacttcataaaatcataaa 362511  T
Q  145 tgagataattaattaa-ttatccttcaacata 175  Q
    | || ||||||| ||| |||||||||||||||    
T  362512 taagttaattaactaatttatccttcaacata 362543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 21285193 - 21285306
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaa-catatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || |  ||||||||||||| ||| |||||||||| ||||||||||||      |||||||||||||||   ||||||||||||    
T  21285193 tgtaacaccccgttttcccaatataaaaatttcaaaacatttatcagagtaatcaacacataaa------cggaatgctacacttataaaaatcataaat 21285286  T
Q  146 gagataattaattaattatc 165  Q
    ||||||||||| ||||||||    
T  21285287 gagataattaactaattatc 21285306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 8730402 - 8730337
Alignment:
Q  111 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 175  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  8730402 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 8730337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 55 - 152
Target Start/End: Complemental strand, 5611079 - 5610987
Alignment:
Q  55 cccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaatgagataa 152  Q
    |||||||| || |||||||||||||| | ||| ||||||||||||||||||      ||| |||||||||||||||||| |||||||||||||||||||    
T  5611079 cccgttttcccaacttaaaaatttcatatataaatcagagtattcaacaca------taaccggaatgctacacttcataaaaatcataaatgagataa 5610987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 23761625 - 23761567
Alignment:
Q  222 gcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaa 280  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||| ||| ||||||||    
T  23761625 gcctcatcaaaacatctcataaatcggttcaacaacttaatcatttgaaattcataaaa 23761567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10267077 - 10267122
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  10267077 tatcttgtttactatttagtgaaatagttaatttgataacgtcctt 10267122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 20988373 - 20988308
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacg 111  Q
    ||||||||| ||||||| || || |||||||||||||||||||||||| ||| |||||||||||||    
T  20988373 ttgtaacactccgttttcccgacgtaaaaatttcaaacatatatcagaatatccaacacataaacg 20988308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 21163020 - 21162897
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || || |||||||||||| ||||| ||||||||| ||| || ||||       ||||||||||||||||  |||||||||||    
T  21163020 ttgtaacaccccgttttcccaacataaaaatttcaa-catattatcagagtaatcatcaaataa-------cggaatgctacacttctaaaaatcataaa 21162929  T
Q  145 tgagataattaattaattatccttcaacataa 176  Q
      ||||||||||  ||||||| ||||||||||    
T  21162928 acagataattaacaaattatctttcaacataa 21162897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 23777714 - 23777661
Alignment:
Q  123 ctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    ||||||||| ||||||||||||||||||||||||  ||||||| ||||||||||    
T  23777714 ctacacttcttaaaatcataaatgagataattaacaaattatctttcaacataa 23777661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 21390381 - 21390330
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    ||||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  21390381 ttgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagta 21390330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 21396902 - 21396851
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    ||||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  21396902 ttgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagta 21396851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 21779707 - 21779656
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    ||||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  21779707 ttgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagta 21779656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 21791395 - 21791344
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    ||||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  21791395 ttgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagta 21791344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 21919882 - 21919831
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacata-tatcagagta 96  Q
    ||||||||||||||||| || |||||||||||||||||||| ||||||||||    
T  21919882 ttgtaacaccccgttttcccaacttaaaaatttcaaacatattatcagagta 21919831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 21169595 - 21169533
Alignment:
Q  114 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  21169595 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 21169533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 44475146 - 44475208
Alignment:
Q  114 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  44475146 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 44475208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 44478408 - 44478470
Alignment:
Q  114 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  44478408 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 44478470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 45131924 - 45131874
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  45131924 tgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagta 45131874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 32806799 - 32806856
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatcctt 168  Q
    ||||||||||||||||||||  |||| |||||||||  ||||||||||||||||||||    
T  32806799 taaacggaatgctacacttctcaaaaatcataaatggaataattaattaattatcctt 32806856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 13509027 - 13508909
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttc-ataaaatcataa 143  Q
    ||||||||||||||||||| |||||||||||||  ||| || ||||||||||  |||||        | |||||||||||||||||| | || || ||||    
T  13509027 tgtaacaccccgtttttccaacttaaaaatttcataaatatttatcagagtaaacaaca-------tttaacggaatgctacacttctaaaatataataa 13508935  T
Q  144 atgagataattaattaattatccttc 169  Q
     ||||||||||||||||| |||||||    
T  13508934 gtgagataattaattaatcatccttc 13508909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 13598557 - 13598439
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttc-ataaaatcataa 143  Q
    ||||||||||||||||||| |||||||||||||  ||| || ||||||||||  |||||        | |||||||||||||||||| | || || ||||    
T  13598557 tgtaacaccccgtttttccaacttaaaaatttcataaatatttatcagagtaaacaaca-------tttaacggaatgctacacttctaaaatataataa 13598465  T
Q  144 atgagataattaattaattatccttc 169  Q
     ||||||||||||||||| |||||||    
T  13598464 gtgagataattaattaatcatccttc 13598439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 17440428 - 17440368
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||| ||||| ||||||||    
T  17440428 taaacggaatgctacacttcttaaaaatcataaatggaataattaactaattttccttcaa 17440368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 19155795 - 19155735
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||| ||||| ||||||||    
T  19155795 taaacggaatgctacacttcttaaaaatcataaatggaataattaactaattttccttcaa 19155735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 19802714 - 19802600
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttc-ataaaatcataa 143  Q
    |||||||||||||||| || |||||||||||||  |||||| ||||||||||  ||||| ||       |||||||||||||||||| | || ||  |||    
T  19802714 tgtaacaccccgttttcccaacttaaaaatttcataaacatttatcagagtaaacaacatat-------aacggaatgctacacttctaaaatatactaa 19802622  T
Q  144 atgagataattaattaattatc 165  Q
    ||||||||||||| ||||||||    
T  19802621 atgagataattaactaattatc 19802600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 21589553 - 21589493
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||||||||||| ||||| |||||||||  || ||||| ||||||||||||||    
T  21589553 taaacggaatgctacacttcttaaaaatcataaatggaattattaactaattatccttcaa 21589493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 40398039 - 40398079
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat 87  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  40398039 tgtaacaccccgttttcccaacttaaaaatttcaaacatat 40398079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 23668452 - 23668503
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    |||||||||||||||| || |||||||||||||| | ||| |||||||||||    
T  23668452 tgtaacaccccgttttcccaacttaaaaatttcacatataaatcagagtatt 23668503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 5867173 - 5867123
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    ||||||||| |||||| || ||||||||||||||||||||| |||||||||    
T  5867173 tgtaacacctcgttttcccaacttaaaaatttcaaacatataatcagagta 5867123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Complemental strand, 18880146 - 18880112
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca 80  Q
    |||||||||||||||||||| ||||||||||||||    
T  18880146 ttgtaacaccccgtttttccaacttaaaaatttca 18880112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 21162855 - 21162794
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaa--tcagttaaacaacttaatc 263  Q
    |||||| |||| ||||| |||||||||||||||||||||||  ||||| ||||| |||||||    
T  21162855 ataagtattggcacgcaggcctcatcaaaacatctcataaaattcagtcaaacatcttaatc 21162794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 21169491 - 21169430
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaa--tcagttaaacaacttaatc 263  Q
    |||||| |||| ||||| |||||||||||||||||||||||  ||||| ||||| |||||||    
T  21169491 ataagtattggcacgcaggcctcatcaaaacatctcataaaattcagtcaaacatcttaatc 21169430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 22819429 - 22819479
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    ||||||||||||||||||| |  |||||||||||||||||| |||||||||    
T  22819429 tgtaacaccccgtttttccaatataaaaatttcaaacatataatcagagta 22819479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 23647805 - 23647843
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaaca 84  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  23647805 ttgtaacaccccgttttcccaacttaaaaatttcaaaca 23647843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 18819188 - 18819127
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcat-aaatcagtt-aaacaacttaatcat 265  Q
    |||| |||| ||||| |||||||||||||| ||||| ||||||||| |||||||||||||||    
T  18819188 aagtcttggcacgcaggcctcatcaaaacacctcataaaatcagttcaaacaacttaatcat 18819127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 18819355 - 18819318
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaaca 84  Q
    |||||||||||||||| || ||||||||||||||||||    
T  18819355 tgtaacaccccgttttcccaacttaaaaatttcaaaca 18819318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 23405646 - 23405698
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagta 96  Q
    ||||||||||||||||| || |||||||||||||  |||||| ||||||||||    
T  23405646 ttgtaacaccccgttttcccaacttaaaaatttcataaacatttatcagagta 23405698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 23405731 - 23405792
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcat-aaatcagtt-aaacaacttaatcat 265  Q
    |||| |||| ||||| |||||||||||||| ||||| ||||||||| |||||||||||||||    
T  23405731 aagtcttggcacgcaggcctcatcaaaacacctcataaaatcagttcaaacaacttaatcat 23405792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 31970500 - 31970552
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagta 96  Q
    ||||||||||||||||| || |||||||||||||  |||||| ||||||||||    
T  31970500 ttgtaacaccccgttttcccaacttaaaaatttcataaacatttatcagagta 31970552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 4083132 - 4083188
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaaca 103  Q
    |||||||||||||||| || || ||||||||||| ||| | |||||||| |||||||    
T  4083132 tgtaacaccccgttttcccaacataaaaatttcatacaaaaatcagagttttcaaca 4083188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 17140271 - 17140331
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||| |||| ||||| |||||||||||  |||||||||| |||||||||||||||| ||||    
T  17140271 aagtcttggcacgcaggcctcatcaaattatctcataaattcagttaaacaacttattcat 17140331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 18679084 - 18679028
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaaca 103  Q
    |||||||||||||||| || || ||||||||||| ||| | |||||||| |||||||    
T  18679084 tgtaacaccccgttttcccaacataaaaatttcatacaaaaatcagagttttcaaca 18679028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 18718273 - 18718217
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaaca 103  Q
    |||||||||||||||| || || ||||||||||| ||| | |||||||| |||||||    
T  18718273 tgtaacaccccgttttcccaacataaaaatttcatacaaaaatcagagttttcaaca 18718217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 18879988 - 18879928
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcataaat-cagttaaacaacttaatcat 265  Q
    |||| |||| |||||  ||||||||||| ||||||||||| ||||||||||||||| ||||    
T  18879988 aagtcttggcacgcagacctcatcaaaatatctcataaatccagttaaacaacttattcat 18879928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 23479608 - 23479544
Alignment:
Q  112 taaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaacata 175  Q
    |||||||||||||||||||| | ||||  ||||||||||||| |||  | |||||||||||||||    
T  23479608 taaacggaatgctacacttcttaaaaaagataaatgagataaataacaatttatccttcaacata 23479544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 46 - 285
Target Start/End: Complemental strand, 23545 - 23295
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaa-catatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || || | ||||||||||| ||| | |||||||||||||||  ||||    |||| |||||||||||||  |||||||||||    
T  23545 ttgtaacaccccgttttcccaacatgaaaatttcaaaacatttttcagagtattcaaca--taaa----aacgaaatgctacacttctaaaaatcataaa 23452  T
Q  145 tgagataattaattaattatccttcaacataaatcaattccaagacattgcagggaatt----------------ataagttttggtacgcatgcctcat 228  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||                |||||| |||| ||||| |||||||    
T  23451 tgagataattaattaattatccttcaacataaatcaattccaaaacattgcagcggattaaattcatcaacttaaataagtcttggcacgcaggcctcat 23352  T
Q  229 caaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23351 caaagcatctcataagtcagttaaacaacttaatcatttcaaactcataaaacaaat 23295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 22399 - 22337
Alignment:
Q  114 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    ||||||||||||||||||  |||||||||||  |||| |||||  ||||||| ||||||||||    
T  22399 aacggaatgctacacttctaaaaatcataaaacagatgattaacaaattatctttcaacataa 22337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 46 - 285
Target Start/End: Complemental strand, 14928717 - 14928468
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||||  ||||||| || ||||||||||||||||||||||||||||||||||||||||||| |      |||||| |||||||||||||||||||||    
T  14928717 ttgtaacattccgttttcccaacttaaaaatttcaaacatatatcagagtattcaacacataaatg------gaatgcaacacttcataaaatcataaat 14928624  T
Q  146 gagataattaattaattatccttcaacataaatcaattccaagacattgcagggaatt------------------ataagttttggtacgcatgcctca 227  Q
     |||||||||| ||||||||||||||||||| |||||||||| ||||||||| | |||                  |||||| |||| ||||| ||||||    
T  14928623 aagataattaactaattatccttcaacataa-tcaattccaaaacattgcagcggatttaaagttcatcatcataaataagtcttggcacgcaggcctca 14928525  T
Q  228 tcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  14928524 tcaaaacatctcataaatcagttaaacaacttaatcattt-aaattcataaaacaaat 14928468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 47 - 197
Target Start/End: Complemental strand, 16375770 - 16375625
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaa-catatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||| ||||||||||| || |||||||||||||||| ||| |||||||||||||||||||||||||      ||||| |||||||||||| |||||||||    
T  16375770 tgtaccaccccgttttcccaacttaaaaatttcaaaacatttatcagagtattcaacacataaacg------gaatgttacacttcataagatcataaat 16375677  T
Q  146 gagataattaattaattatccttcaacataaatcaattccaagacattgcag 197  Q
     |||||||||| ||||||||||||||||||| |||||||||| | |||||||    
T  16375676 aagataattaactaattatccttcaacataattcaattccaaaatattgcag 16375625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 47 - 197
Target Start/End: Complemental strand, 15993947 - 15993802
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaac-atatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||||| |||||| || || |||||||||||||  || |||||||||||||||||  ||||    ||||||||||||||||||  ||||||||||||    
T  15993947 tgtaacacctcgttttcccaacataaaaatttcaaaagatttatcagagtattcaaca--taaa----aacggaatgctacacttctaaaaatcataaat 15993854  T
Q  146 gagataattaattaattatccttcaacataaatcaattccaagacattgcag 197  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  15993853 gagataattaactaattatccttcaacataaatcaattccaaaacattgcag 15993802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 48 - 197
Target Start/End: Original strand, 46641735 - 46641879
Alignment:
Q  48 gtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatg 146  Q
    |||||||||| |||| || ||||||||||||||||||||| ||||||||| |||||| |||||      ||||||||||||||||  |||||||||||||    
T  46641735 gtaacaccccattttcccaacttaaaaatttcaaacatattatcagagtaatcaacatataaa------cggaatgctacacttctaaaaatcataaatg 46641828  T
Q  147 agataattaattaattatccttcaacataaatcaattccaagacattgcag 197  Q
    |||||||||| ||||||||||||||||||| |||||||||| || ||||||    
T  46641829 agataattaactaattatccttcaacataattcaattccaaaactttgcag 46641879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 39707247 - 39707105
Alignment:
Q  50 aacaccccgtttttcctacttaaaaatttcaaa-catatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatgag 148  Q
    |||||||||||||||| || ||||||||||||| ||| ||| |||||| |||||||||||||       ||||||||||||||  ||||||||||||| |    
T  39707247 aacaccccgtttttccaacataaaaatttcaaaacatttattagagtaatcaacacataaaca------gaatgctacacttctaaaaatcataaatggg 39707154  T
Q  149 ataattaattaattatccttcaacataaatcaattccaagacattgcag 197  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||    
T  39707153 ataattaactaattatccttcaacataaatcaattccaaaacattgcag 39707105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 12773258 - 12773385
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || |||||||||||||| ||||||| ||||||||||||||||||||       |||||||||||||||||||||||||||||     
T  12773258 tgtaacaccccgttttcccaacttaaaaatttcatacatataatcagagtattcaacacataa-------cggaatgctacacttcataaaatcataaac 12773350  T
Q  146 gagataattaattaattatccttcaacataaatca 180  Q
    |||||||| || |||||||||||| ||||||||||    
T  12773351 gagataatgaactaattatccttcgacataaatca 12773385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 8842176 - 8842304
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacata-tatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||| ||||||| || |||||||||||||||||||| |||||||||||||||||||      ||||||||||||||||||||  ||| ||||||||    
T  8842176 tgtaacactccgttttcccaacttaaaaatttcaaacatattatcagagtattcaacaca------taaacggaatgctacacttctaaaagtcataaat 8842269  T
Q  146 gagataattaattaattatccttcaacataaatca 180  Q
    ||||||||||| ||||| || |||| |||||||||    
T  8842270 gagataattaactaattttctttcatcataaatca 8842304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 14824 - 14700
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || || ||||||||||| ||||| |||||||||| ||||||||||||||      |||||||||||||| ||||||||||||    
T  14824 ttgtaacaccccgttttcccaacataaaaatttcataacatttatcagagtaatcaacacataaacg------gaatgctacacttcttaaaatcataaa 14731  T
Q  145 tgagataattaattaattatccttcaacata 175  Q
    |||||||| |||  | |||||||||||||||    
T  14730 tgagataaataacaatttatccttcaacata 14700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 15189059 - 15189141
Alignment:
Q  115 acggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcag 197  Q
    ||||||||  |||||||  ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||    
T  15189059 acggaatgtcacacttctaaaaatcataaatgagataattaactaattatccttcaacataattcaattccaaaacattgcag 15189141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 56117042 - 56116957
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 197  Q
    ||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||| ||||||| |||||||| |||||||||    
T  56117042 taaacggaatgctac-cttcataaaatcataaataagataattaactaattatccttcaatataaatcaaattccaaaacattgcag 56116957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 165
Target Start/End: Complemental strand, 15898717 - 15898602
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcata 142  Q
    |||||||||||||||||| || |||||||||||||| || | |||||||||||||||||||||       |||||||||||||||||| | ||||| |||    
T  15898717 tttgtaacaccccgttttcccaacttaaaaatttcataataaatatcagagtattcaacacat-------aacggaatgctacacttcttaaaaataata 15898625  T
Q  143 aatgagataattaattaattatc 165  Q
    |||||||||||||| ||||||||    
T  15898624 aatgagataattaactaattatc 15898602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 52244157 - 52244040
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || |||||||||||||| ||||| |||||||||| ||||||||      ||||||||||||| |||||| ||||| |||||||    
T  52244157 tgtaacaccccgttttcccaacttaaaaatttcataacatttatcagagtaatcaacaca------taaacggaatgctgcacttcttaaaaacataaat 52244064  T
Q  146 gagataattaattaattatccttc 169  Q
    | ||||| ||| ||||||||||||    
T  52244063 gtgataaataactaattatccttc 52244040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 169
Target Start/End: Complemental strand, 43199518 - 43199398
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttca--aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcata 142  Q
    ||||||||||||| ||||| | || |||||||||||  ||||  |||||||||| |||| ||||||| |      |||||||||||||| ||||||||||    
T  43199518 tttgtaacaccccattttttcaacgtaaaaatttcataaacaattatcagagtaatcaatacataaatg------gaatgctacacttcttaaaatcata 43199425  T
Q  143 aatgagataattaattaattatccttc 169  Q
    |||||||||||||| ||||||||||||    
T  43199424 aatgagataattaactaattatccttc 43199398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 22352654 - 22352718
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttcaaacata-tatcagagtattcaacacataa 108  Q
    |||||||||||||||||| || |||||||||||||||||||| |||||||||| |||||||||||    
T  22352654 tttgtaacaccccgttttcccaacttaaaaatttcaaacatattatcagagtaatcaacacataa 22352718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 15532429 - 15532494
Alignment:
Q  111 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 175  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| || ||||||||||||    
T  15532429 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttctccttcaacata 15532494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 39218956 - 39219001
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  39218956 tatcttgtttactgtttagtgaaatagttaatttgataatgtcctt 39219001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 39225482 - 39225527
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  39225482 tatcttgtttactgtttagtgaaatagttaatttgataatgtcctt 39225527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 165
Target Start/End: Original strand, 3825954 - 3826069
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcata 142  Q
    |||||||||||||||||| || || ||||||||||| || |  |||||||||||||| |||||||       |||||||||||||||| ||||| | |||    
T  3825954 tttgtaacaccccgttttcccaacataaaaatttcataataattatcagagtattcagcacataa-------cggaatgctacacttcttaaaaataata 3826046  T
Q  143 aatgagataattaattaattatc 165  Q
    |||||||||||||| ||||||||    
T  3826047 aatgagataattaactaattatc 3826069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 53083125 - 53083000
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    |||||||||||||||| || || ||||||||||| ||||  |||||||||||||||||||||      ||||||||  |||||||| | |||||||||||    
T  53083125 tgtaacaccccgttttcccaacataaaaatttcataacaattatcagagtattcaacacata------aacggaatattacacttcttaaaaatcataaa 53083032  T
Q  145 tgagataattaattaattatccttcaacataa 176  Q
    || ||||| |||  | ||||||||||||||||    
T  53083031 tgggataaataacaatttatccttcaacataa 53083000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 15090684 - 15090747
Alignment:
Q  222 gcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    |||||||| || |||||||||||||||||||||||||| ||||||| | | |||||||||||||    
T  15090684 gcctcatccaaccatctcataaatcagttaaacaactttatcatttaatattcataaaacaaat 15090747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 234894 - 234936
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtc 43  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  234894 tatcttgtttactgtttagtgaaatagttaatttgataatgtc 234936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 44674956 - 44675014
Alignment:
Q  207 agttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 265  Q
    |||||||| ||||| |||||||| | || ||||||||||||||||||||||||||||||    
T  44674956 agttttggcacgcaggcctcatctagacgtctcataaatcagttaaacaacttaatcat 44675014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 16375602 - 16375545
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaactta 260  Q
    |||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  16375602 ataagtcttggcacgcaggcctcatcaaaacatctcataaattcagttaaacaactta 16375545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 13843469 - 13843533
Alignment:
Q  112 taaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaacata 175  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||   | |||||||||||||||    
T  13843469 taaacggaatgctacacttcataaaaatcataaatgagataaatagcaatttatccttcaacata 13843533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 179
Target Start/End: Original strand, 15090503 - 15090627
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatg 146  Q
    |||||||||||||||| || ||||||||||  ||||||||| ||||||||    | |||| | | ||||||| ||   ||||||| ||||| |||||| |    
T  15090503 tgtaacaccccgttttcccaacttaaaaat--caaacatatttcagagta----aaacatca-cataaacgggatatcacacttcttaaaa-cataaaag 15090594  T
Q  147 agataattaattaattatccttcaacataaatc 179  Q
    |||||||||| ||||||||||||||||||||||    
T  15090595 agataattaactaattatccttcaacataaatc 15090627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 14658 - 14596
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaa--tcagttaaacaacttaatca 264  Q
    |||||| |||| ||| | |||||||||||||||||||||||  ||||||||||||||||||||    
T  14658 ataagtcttggcacgtaggcctcatcaaaacatctcataaagttcagttaaacaacttaatca 14596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 172
Target Start/End: Original strand, 14037867 - 14037988
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataa 143  Q
    |||||||| |||||||| || |||||||||||||  |||||| |||| ||||| |||||||||       ||||||||||||||||||  ||| ||||||    
T  14037867 ttgtaacagcccgttttcccaacttaaaaatttcataaacatttatcggagtaatcaacacat-------aacggaatgctacacttctaaaagtcataa 14037959  T
Q  144 atgagataattaattaattatccttcaac 172  Q
    |  ||||||||||  ||||||| ||||||    
T  14037960 aacagataattaacaaattatctttcaac 14037988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 50159314 - 50159373
Alignment:
Q  39 atgtcctttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    ||||| |||||||||||||||||| || |||||||||||||| | ||| |||||||||||    
T  50159314 atgtcatttgtaacaccccgttttcccaacttaaaaatttcacatataaatcagagtatt 50159373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 16349524 - 16349462
Alignment:
Q  114 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  16349524 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 16349462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 17995211 - 17995153
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttc 169  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||| ||||||||||||    
T  17995211 taaacggaatgctacacttcttaaaaatcataaatggaataattaactaattatccttc 17995153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 39707082 - 39707020
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataa-atcagttaaacaacttaatcat 265  Q
    |||||| |||| ||||| ||||||||||||||||||||||  ||||||||||||| |||||||    
T  39707082 ataagtcttggcacgcaggcctcatcaaaacatctcataatttcagttaaacaacataatcat 39707020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 47114632 - 47114590
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtc 43  Q
    ||||||||||||| |||||| ||||||||||||||||||||||    
T  47114632 tatcttgtttactgtttagtaaaatagttaatttgataatgtc 47114590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 52874062 - 52874016
Alignment:
Q  134 aaaatcataaatgagataattaattaattatccttcaacataaatca 180  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||    
T  52874062 aaaatcataaaacagataattaactaattatccttcaacataaatca 52874016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 9636897 - 9636950
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    ||||||||||||||||||||| |||||||||||||| | ||| ||||| |||||    
T  9636897 tttgtaacaccccgtttttccaacttaaaaatttcacatataaatcagggtatt 9636950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 15369200 - 15369315
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttc-ataaaatcata 142  Q
    ||||||||||||||||| || |||||||||||||  |||||| ||||||||||  ||||| ||       |||||||||||||||||| | || || |||    
T  15369200 ttgtaacaccccgttttcccaacttaaaaatttcataaacatttatcagagtaaacaacatat-------aacggaatgctacacttctaaaatataata 15369292  T
Q  143 aatgagataattaattaattatc 165  Q
    |||||||||||||  ||||||||    
T  15369293 aatgagataattagctaattatc 15369315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 15372708 - 15372823
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttc-ataaaatcata 142  Q
    ||||||||||||||||| || |||||||||||||  |||||| ||||||||||  ||||| ||       |||||||| ||||||||| | || || |||    
T  15372708 ttgtaacaccccgttttcccaacttaaaaatttcataaacatttatcagagtaaacaacatat-------aacggaattctacacttctaaaatataata 15372800  T
Q  143 aatgagataattaattaattatc 165  Q
    |||||||||||||| ||||||||    
T  15372801 aatgagataattaactaattatc 15372823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40055557 - 40055602
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    |||||| |||||| ||||||||||||||||||||||||| ||||||    
T  40055557 tatcttatttactgtttagtgaaatagttaatttgataaagtcctt 40055602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40056402 - 40056357
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    |||||| |||||| ||||||||||||||||||||||||| ||||||    
T  40056402 tatcttatttactgtttagtgaaatagttaatttgataaagtcctt 40056357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 10697244 - 10697184
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||||||||||| ||||| | |||||||  |||||||| ||||||||||||||    
T  10697244 taaacggaatgctacacttcttaaaaattataaatggaataattaactaattatccttcaa 10697184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 10911013 - 10910953
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||||||||||| ||||| | |||||||  |||||||| ||||||||||||||    
T  10911013 taaacggaatgctacacttcttaaaaattataaatggaataattaactaattatccttcaa 10910953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 12289100 - 12289036
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    ||||||||||  || ||||| |||||||||||||||||||| |||  | ||||||||||||||||    
T  12289100 taaacggaatattatacttcttaaaatcataaatgagataaataaaaatttatccttcaacataa 12289036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 14163767 - 14163822
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatcctt 168  Q
    |||||||||||||||||| | |||| ||| ||||||||||||||| |||||||||||    
T  14163767 taaacggaatgctacactacttaaa-tcacaaatgagataattaactaattatcctt 14163822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 14279515 - 14279629
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat--atcagagtattcaacacataaacgtaaacggaatgctacacttcataaa-atcataa 143  Q
    |||||||||||||||| || |||||||||||||| | ||||  |||||||||  ||||| ||||       ||||||||||||||||  ||| || ||||    
T  14279515 tgtaacaccccgttttcccaacttaaaaatttcataaatatttatcagagtaaacaacatataa-------cggaatgctacacttccaaaatataataa 14279607  T
Q  144 atgagataattaattaattatc 165  Q
    ||||||||||||| ||||||||    
T  14279608 atgagataattaactaattatc 14279629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 14853846 - 14853783
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacg 111  Q
    ||||||||||||||||||  || ||||||||||  | ||| ||||||||||||||||||||||||    
T  14853846 tgtaacaccccgtttttcaaacataaaaatttcgcatata-atcagagtattcaacacataaacg 14853783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 285
Target Start/End: Complemental strand, 15993779 - 15993700
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    |||||| |||| ||| | |||||||||||||| |||||||| |||||||||||||||| ||||   ||| |||||||||||||    
T  15993779 ataagtcttggcacgtaggcctcatcaaaacacctcataaattcagttaaacaacttattcat---aaaatcataaaacaaat 15993700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 44052191 - 44052251
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||| |||| ||||| |||||||||||| |||||||||| |||||||||||||||| ||||    
T  44052191 aagtcttggcacgcaggcctcatcaaaatatctcataaattcagttaaacaacttattcat 44052251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 22631795 - 22631842
Alignment:
Q  128 cttcataaaatcataaatgagataattaattaattatccttcaacata 175  Q
    |||| ||||||||||||||||||||||||  ||||||| |||||||||    
T  22631795 cttcttaaaatcataaatgagataattaacaaattatctttcaacata 22631842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 22632713 - 22632760
Alignment:
Q  128 cttcataaaatcataaatgagataattaattaattatccttcaacata 175  Q
    |||| ||||||||||||||||||||||||  ||||||| |||||||||    
T  22632713 cttcttaaaatcataaatgagataattaacaaattatctttcaacata 22632760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 56116934 - 56116875
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaat 262  Q
    |||||| |||| ||| | ||||||||||||| ||||||||| ||||||||||||||||||    
T  56116934 ataagtcttggcacgtaggcctcatcaaaacgtctcataaattcagttaaacaacttaat 56116875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 14054211 - 14054161
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    ||||||||  ||||||||| ||||||||||||||||||||| |||||||||    
T  14054211 tgtaacacttcgtttttccaacttaaaaatttcaaacatataatcagagta 14054161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 14700682 - 14700747
Alignment:
Q  46 ttgtaacaccccgtttttccta-cttaaaaatttcaaacatatatcagagtattcaacacataaacg 111  Q
    |||||||| ||||||||||| | | ||||||||||| | ||| ||||||||||||||||||||||||    
T  14700682 ttgtaacatcccgtttttcccaacataaaaatttcacatata-atcagagtattcaacacataaacg 14700747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 16352696 - 16352646
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    |||||||||||||||| || || |||||||||||||||||| |||||||||    
T  16352696 tgtaacaccccgttttcccaacataaaaatttcaaacatataatcagagta 16352646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 16357812 - 16357750
Alignment:
Q  114 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    |||||||||| |||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  16357812 aacggaatgcaacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 16357750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 17045686 - 17045736
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    |||||||||||||||| || |||| |||||||||||||||| |||||||||    
T  17045686 tgtaacaccccgttttcccaacttcaaaatttcaaacatataatcagagta 17045736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 20149030 - 20149143
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataaa 144  Q
    |||||||| ||||||| || || ||||||||||| || |  |||||||||||||| |||||||       ||||||| |||||||| ||||| | |||||    
T  20149030 tgtaacactccgttttcccaacataaaaatttcataataattatcagagtattcagcacataa-------cggaatgttacacttcttaaaaataataaa 20149122  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  20149123 tgagataattaaataattatc 20149143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 7797953 - 7798002
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagta 96  Q
    |||||||| ||||||| || |||||||||||||||||||  |||||||||    
T  7797953 tgtaacacaccgttttcccaacttaaaaatttcaaacattcatcagagta 7798002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 14649867 - 14649927
Alignment:
Q  50 aacaccccgtttttccta-cttaaaaatttcaaacatatatcagagtattcaacacataaac 110  Q
    |||||||||||||||| | | ||||||||||| | ||| |||||||||||||||||||||||    
T  14649867 aacaccccgtttttcccaacataaaaatttcacatata-atcagagtattcaacacataaac 14649927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 15374997 - 15375049
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagta 96  Q
    ||||||||||||||||| || |||||||||||||  |||||| ||||||||||    
T  15374997 ttgtaacaccccgttttcccaacttaaaaatttcataaacatttatcagagta 15375049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 15614275 - 15614327
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagta 96  Q
    |||||||||||| ||||||| |||||||||||||  |||||| ||||||||||    
T  15614275 ttgtaacaccccatttttccaacttaaaaatttcataaacatttatcagagta 15614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 16240896 - 16240844
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagta 96  Q
    ||||||||||||||||| || |||||||||||||  |||||| ||||||||||    
T  16240896 ttgtaacaccccgttttcccaacttaaaaatttcataaacatttatcagagta 16240844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 56566068 - 56566031
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaac 83  Q
    ||||||||||||||||| || |||||||||||||||||    
T  56566068 ttgtaacaccccgttttcccaacttaaaaatttcaaac 56566031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 12521295 - 12521343
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttc-aaacatatatcagag 94  Q
    |||||||||||||||| || ||||||||||||| |||||| ||||||||    
T  12521295 tgtaacaccccgttttcccaacttaaaaatttctaaacatttatcagag 12521343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 13593580 - 13593520
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||  ||||||| ||||| ||||||| || |||||||| ||||||||||||||    
T  13593580 taaacggaatgtcacacttcttaaaaatcataaacgaaataattaactaattatccttcaa 13593520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 14157062 - 14157117
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatcctt 168  Q
    |||||| ||||||||||| | |||| ||| ||||||||||||||| |||||||||||    
T  14157062 taaacgaaatgctacactacttaaa-tcacaaatgagataattaactaattatcctt 14157117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 14654338 - 14654390
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttc-aaacatatatcagagta 96  Q
    |||||||||||||||||| || || |||||||||| |||||| ||||||||||    
T  14654338 tttgtaacaccccgttttcccaacataaaaatttctaaacatttatcagagta 14654390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 19608510 - 19608570
Alignment:
Q  112 taaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||||||||||| | |||||||||||||  |||  ||| ||||||||||||||    
T  19608510 taaacggaatgctacacttcttaaaaatcataaatggaatatataactaattatccttcaa 19608570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 47 - 197
Target Start/End: Original strand, 5760 - 5904
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatg 146  Q
    |||||||||||||||| || || ||||||||||||||||||||||||||||||| ||||||||      ||||||| ||||||||||||||||||||||     
T  5760 tgtaacaccccgttttcccaacataaaaatttcaaacatatatcagagtattcatcacataaa------cggaatgttacacttcataaaatcataaata 5853  T
Q  147 agataattaattaattatccttcaacataaatcaattccaagacattgcag 197  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  5854 agataattaactaattatccttcaacataaatcaattccaaaacattgcag 5904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 19347 - 19398
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    |||||||||||||||| || |||||||||||||| | ||| |||||||||||    
T  19347 tgtaacaccccgttttcccaacttaaaaatttcacatataaatcagagtatt 19398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 4e-47; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 47 - 197
Target Start/End: Original strand, 14233626 - 14233770
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatg 146  Q
    |||||||||||||||| || |||||||||||||||||||||||| ||||||||| || |||||      ||||||||||||||||||||||||||||||     
T  14233626 tgtaacaccccgttttcccaacttaaaaatttcaaacatatatctgagtattcatcatataaa------cggaatgctacacttcataaaatcataaata 14233719  T
Q  147 agataattaattaattatccttcaacataaatcaattccaagacattgcag 197  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  14233720 agataattaactaattatccttcaacataaatcaattccaaaacattgcag 14233770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 48 - 197
Target Start/End: Original strand, 15467050 - 15467193
Alignment:
Q  48 gtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatga 147  Q
    |||||||||| ||||||| |  |||||||||||||||||||||||||||||||||| |||||      |||||||||||||||||||||||||||||| |    
T  15467050 gtaacaccccatttttccaatataaaaatttcaaacatatatcagagtattcaacatataaa------cggaatgctacacttcataaaatcataaataa 15467143  T
Q  148 gataattaattaattatccttcaacataaatcaattccaagacattgcag 197  Q
    ||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  15467144 gataattaactaattatccttcaacgtaaatcaattccaaaacattgcag 15467193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 47 - 178
Target Start/End: Complemental strand, 49971233 - 49971109
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatg 146  Q
    |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||       ||||||||||||||||||||||||||||||     
T  49971233 tgtaacaccccgttttcccaacttaaaaatttcaaacatatatcaaagtattcaacacataa-------cggaatgctacacttcataaaatcataaata 49971141  T
Q  147 agataattaattaattatccttcaacataaat 178  Q
    |||||||||| |||||||||||||||||||||    
T  49971140 agataattaactaattatccttcaacataaat 49971109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 16096533 - 16096661
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacata-tatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||      ||||||||||||||||||||  ||| ||||||||    
T  16096533 tgtaacaccccgttttcccaacttaaaaatttcaaacatattatcagagtattcaacaca------taaacggaatgctacacttctaaaagtcataaat 16096626  T
Q  146 gagataattaattaattatccttcaacataaatca 180  Q
    ||||||||||| |||||||| ||||||||||||||    
T  16096627 gagataattaactaattatcattcaacataaatca 16096661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 32306848 - 32306976
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||      |||||| |||| ||||||||  ||| ||||||||    
T  32306848 tgtaacaccccgtttttccaacttaaaaatttcaaacatataatcagagtattcaacaca------taaacgaaatgttacacttctaaaagtcataaat 32306941  T
Q  146 gagataattaattaattatccttcaacataaatca 180  Q
    ||||||||||| |||||||||||||||||||||||    
T  32306942 gagataattaactaattatccttcaacataaatca 32306976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 46 - 194
Target Start/End: Original strand, 12268347 - 12268491
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || ||||||||||||||||||||| ||||||||| |||||| |||||      ||||||||||||||||  |||||||||||    
T  12268347 ttgtaacaccccgttttcccaacttaaaaatttcaaacatattatcagagtaatcaacatataaa------cggaatgctacacttctaaaaatcataaa 12268440  T
Q  145 tgagataattaattaattatccttc-aacataaatcaattccaagacattg 194  Q
    |||||||||||| |||||||||||| ||||||| ||||||| || ||||||    
T  12268441 tgagataattaactaattatccttcaaacataattcaattcaaaaacattg 12268491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 46 - 197
Target Start/End: Complemental strand, 12936574 - 12936428
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||| ||| ||||||||||      |||||||||||||| ||||||| ||||    
T  12936574 ttgtaacaccccgtttttccaacttaaaaatttcaaacatataatcagagtaatcatcacataaacg------gaatgctacacttc-taaaatcgtaaa 12936482  T
Q  145 tgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 197  Q
      |||||||||| ||||||||||||||||||| || |||||||| |||||||||    
T  12936481 caagataattaactaattatccttcaacataattcaaattccaaaacattgcag 12936428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 1645621 - 1645494
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||| |||||||||| || |||||||||||||||||||||| ||||||||||||||||||||       ||||||||||||||||  ||| ||||||||    
T  1645621 tgtaaaaccccgttttcccaacttaaaaatttcaaacatataatcagagtattcaacacataa-------cggaatgctacacttctaaaagtcataaat 1645529  T
Q  146 gagataattaattaattatccttcaacataaatca 180  Q
    ||||||||| | |||||||||||||||||||||||    
T  1645528 gagataattgactaattatccttcaacataaatca 1645494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 1466878 - 1466734
Alignment:
Q  47 tgtaacaccccgttttt-cctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || ||||||||||||||||||||| |||| |||| ||| || |||||||      ||||||||||||||  |||||||||||    
T  1466878 tgtaacaccccgttttttccaacttaaaaatttcaaacatattatcaaagtaatcagcatataaacg------gaatgctacacttctaaaaatcataaa 1466785  T
Q  145 tgagataattaattaattatccttcaacataaatcaattccaagacattgc 195  Q
    |||||||||||| ||||||| ||||||||||| |||||||||| |||||||    
T  1466784 tgagataattaactaattatacttcaacataattcaattccaaaacattgc 1466734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 196
Target Start/End: Complemental strand, 49391086 - 49390943
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||||||||||||  | ||||||||||||||||||||| ||||||||| |||||| |||||||      |||||||||||||| |||||||| ||||    
T  49391086 tgtaacaccccgttttctcaacttaaaaatttcaaacatattatcagagtaatcaacatataaacg------gaatgctacacttc-taaaatcacaaat 49390994  T
Q  146 gagataattaattaattatccttcaacataaatcaattccaagacattgca 196  Q
    ||||||||||| ||||||||||||||||||| |||| | ||| ||||||||    
T  49390993 gagataattaactaattatccttcaacataattcaacttcaaaacattgca 49390943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 197
Target Start/End: Complemental strand, 49669005 - 49668860
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||||||||||||||| |||||||||||||||||||||| | |||||| ||| ||||||||||      ||||||||||||||| |||||| ||||     
T  49669005 tgtaacaccccgtttttccaacttaaaaatttcaaacatataataagagtaatcatcacataaacg------gaatgctacacttca-aaaatcgtaaac 49668913  T
Q  146 gagataattaattaattatccttcaacataaatc-aattccaagacattgcag 197  Q
     |||||||||| ||||||||||||||| ||| || |||||||| |||||||||    
T  49668912 aagataattaactaattatccttcaacgtaattcaaattccaaaacattgcag 49668860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 197
Target Start/End: Original strand, 9512114 - 9512257
Alignment:
Q  49 taacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatga 147  Q
    |||||| ||||||| || |||||||||||||||||||||| |||||||| ||| ||||||||||      |||||||||||||| ||||||| ||||  |    
T  9512114 taacactccgttttcccaacttaaaaatttcaaacatataatcagagtaatcatcacataaacg------gaatgctacacttc-taaaatcgtaaacaa 9512206  T
Q  148 gataattaattaattatccttcaacataaatc-aattccaagacattgcag 197  Q
    ||||||||| ||||||||||||||||||| || |||||||| |||||||||    
T  9512207 gataattaactaattatccttcaacataattcaaattccaaaacattgcag 9512257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 197
Target Start/End: Original strand, 9520089 - 9520232
Alignment:
Q  49 taacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatga 147  Q
    |||||| ||||||| || |||||||||||||||||||||| |||||||| ||| ||||||||||      |||||||||||||| ||||||| ||||  |    
T  9520089 taacactccgttttcccaacttaaaaatttcaaacatataatcagagtaatcatcacataaacg------gaatgctacacttc-taaaatcgtaaacaa 9520181  T
Q  148 gataattaattaattatccttcaacataaatc-aattccaagacattgcag 197  Q
    ||||||||| ||||||||||||||||||| || |||||||| |||||||||    
T  9520182 gataattaactaattatccttcaacataattcaaattccaaaacattgcag 9520232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 45 - 175
Target Start/End: Complemental strand, 52524702 - 52524577
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataa 143  Q
    |||||||||||| ||||| || |||||||||||||| ||||| |||||||||| ||||||||||||||      |||||||||||||| ||||| |||||    
T  52524702 tttgtaacaccctgttttcccaacttaaaaatttcataacatttatcagagtaatcaacacataaacg------gaatgctacacttcttaaaaacataa 52524609  T
Q  144 atgagataattaattaattatccttcaacata 175  Q
    ||||||||| |||  | |||||||||||||||    
T  52524608 atgagataaataacaatttatccttcaacata 52524577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 197
Target Start/End: Original strand, 16102972 - 16103116
Alignment:
Q  49 taacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatga 147  Q
    |||||||||| ||| || ||||||||||||||||||||| ||||||||| |||||| |||| ||      ||||||||||||||  |||||||||||| |    
T  16102972 taacaccccgatttcccaacttaaaaatttcaaacatattatcagagtaatcaacatataaccg------gaatgctacacttctaaaaatcataaataa 16103065  T
Q  148 gataattaattaattatccttcaacataaatc-aattccaagacattgcag 197  Q
    ||||||||| |||||||| ||| |||| |||| |||||||| |||||||||    
T  16103066 gataattaactaattatctttccacatgaatcaaattccaaaacattgcag 16103116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 22148819 - 22148706
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    |||||||||||||||| |  |||||||||||||| |||| |||||||||||||||||||||       |||||||||||||||||| | |||||||||||    
T  22148819 tgtaacaccccgttttcctaacttaaaaatttcataacaaatatcagagtattcaacacat-------aacggaatgctacacttcttaaaaatcataaa 22148727  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  22148726 tgagataattaactaattatc 22148706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 37643530 - 37643417
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    |||||||||||||||| || |||||||||||||| |||| ||| |||||||||||||||||       |||||||||||||||||| | ||||||||| |    
T  37643530 tgtaacaccccgttttcccaacttaaaaatttcataacaaatagcagagtattcaacacat-------aacggaatgctacacttcttaaaaatcataga 37643438  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  37643437 tgagataattaactaattatc 37643417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 175
Target Start/End: Original strand, 51298683 - 51298809
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataa 143  Q
    |||||||||||||||||| || ||||||||||||||   |  || |||||||||||||||       |||||||||||||||||||||||||||||||||    
T  51298683 tttgtaacaccccgttttcccgacttaaaaatttcatttaattaatcagagtattcaacat------gtaaacggaatgctacacttcataaaatcataa 51298776  T
Q  144 atgagataattaattaa-ttatccttcaacata 175  Q
    || || ||||||| ||| |||||||||||||||    
T  51298777 ataagttaattaactaatttatccttcaacata 51298809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 15060942 - 15061013
Alignment:
Q  128 cttcataaaatcataaatgagataattaattaattatccttcaacataaatc--aattccaagacattgcag 197  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||| |||||||||    
T  15060942 cttcataaaatcataaataagataattaactaattatccttcaacataaatcaaaattccaaaacattgcag 15061013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 194
Target Start/End: Complemental strand, 12175200 - 12175056
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||| ||||| || |||||||||||||||||||||| |||||||||||| || ||||||       |||||||| |||||| ||||||||||||    
T  12175200 tgtaacaccctgtttt-ccaacttaaaaatttcaaacatataatcagagtattcatcatataaaca------gaatgctagacttca-aaaatcataaat 12175109  T
Q  146 gagataattaattaat---tatccttcaacataaatc-aattccaagacattg 194  Q
     |||||||||| ||||   |||||||||||||||||| |||||||| ||||||    
T  12175108 aagataattaactaataattatccttcaacataaatcaaattccaaaacattg 12175056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 175
Target Start/End: Complemental strand, 14765723 - 14765599
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || ||||||||||||||   |  || |||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  14765723 tgtaacaccccgttttcccgacttaaaaatttcatttaagtaatcagagtattcaacat------gtaaacggaatgctacacttcataaaatcataaat 14765630  T
Q  146 gagataattaattaa-ttatccttcaacata 175  Q
     || ||||||| ||| |||||||||||||||    
T  14765629 aagttaattaactaatttatccttcaacata 14765599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 211 - 285
Target Start/End: Complemental strand, 25477150 - 25477076
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||| | | |||||||||||||    
T  25477150 ttggcacgcaggcctcatccaaacatctcataaatcagttaaacaactttatcatttaatattcataaaacaaat 25477076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 12303786 - 12303851
Alignment:
Q  111 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 175  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  12303786 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 12303851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 36979724 - 36979659
Alignment:
Q  111 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 175  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  36979724 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 36979659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 37005163 - 37005098
Alignment:
Q  111 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 175  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  37005163 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 37005098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 37252080 - 37251954
Alignment:
Q  48 gtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaat 145  Q
    |||||||||||||||||| || ||||||||||| |||   |||||||||||||||||||||      |||| ||||||||||||| | |||||||||| |    
T  37252080 gtaacaccccgtttttccaacataaaaatttcataacgattatcagagtattcaacacata------aacgaaatgctacacttcttaaaaatcataatt 37251987  T
Q  146 gagataattaattaattatccttcaacataaat 178  Q
    ||||||| |||  | ||||||||||||||||||    
T  37251986 gagataaataacaatttatccttcaacataaat 37251954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 9531409 - 9531533
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || ||||||||||||||   |  || |||||||||||||||       ||||||||||||||||||||||||| |||||||||    
T  9531409 tgtaacaccccgttttcccgacttaaaaatttcatttaattaatcagagtattcaacat------gtaaacggaatgctacacttcataatatcataaat 9531502  T
Q  146 gagataattaattaa-ttatccttcaacata 175  Q
     || ||||||| ||| |||||||||||||||    
T  9531503 aagttaattaactaatttatccttcaacata 9531533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 22790978 - 22791070
Alignment:
Q  55 cccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaatgagataa 152  Q
    |||||||| || |||||||||||||| | ||| ||||||||||||||||||      ||| |||||||||||||||||| |||||||||||||||||||    
T  22790978 cccgttttcccaacttaaaaatttcatatataaatcagagtattcaacaca------taaccggaatgctacacttcataaaaatcataaatgagataa 22791070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 8898212 - 8898325
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataaa 144  Q
    |||||||||| |||||||| || ||||||||||| ||||  |||||||||||||||||| |||       |||||||||||||||| ||||| || ||||    
T  8898212 tgtaacacccagtttttccaacataaaaatttcataacaattatcagagtattcaacacttaa-------cggaatgctacacttcttaaaaatcgtaaa 8898304  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  8898305 tgagataattaactaattatc 8898325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10566242 - 10566287
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  10566242 tatcttgtttactgtttagtgaaatagttaatttgataatgtcctt 10566287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10569492 - 10569537
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  10569492 tatcttgtttactgtttagtgaaatagttaatttgataatgtcctt 10569537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 44 - 165
Target Start/End: Original strand, 17736393 - 17736509
Alignment:
Q  44 ctttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcat 141  Q
    |||||||||||||| |||| || |||| ||||||||| |||| |||||||||||||||||| ||       || |||||| |||||||| | ||||||||    
T  17736393 ctttgtaacaccccattttcccaacttgaaaatttcataacaaatatcagagtattcaacaaat-------aatggaatgttacacttcttaaaaatcat 17736485  T
Q  142 aaatgagataattaattaattatc 165  Q
    ||||||||||||||| ||||||||    
T  17736486 aaatgagataattaactaattatc 17736509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 44 - 165
Target Start/End: Original strand, 19037662 - 19037778
Alignment:
Q  44 ctttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcat 141  Q
    |||||||||||||| |||| || |||| ||||||||| |||| |||||||||||||||||| ||       || |||||| |||||||| | ||||||||    
T  19037662 ctttgtaacaccccattttcccaacttgaaaatttcataacaaatatcagagtattcaacaaat-------aatggaatgttacacttcttaaaaatcat 19037754  T
Q  142 aaatgagataattaattaattatc 165  Q
    ||||||||||||||| ||||||||    
T  19037755 aaatgagataattaactaattatc 19037778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 18440811 - 18440747
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacata 175  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||  | |||||||||||||||    
T  18440811 taaacggaatgctacacttcataaaaatcataaatgagataaataacaatttatccttcaacata 18440747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 19485885 - 19485821
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacata 175  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||  | |||||||||||||||    
T  19485885 taaacggaatgctacacttcataaaaatcataaatgagataaataacaatttatccttcaacata 19485821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 176
Target Start/End: Complemental strand, 607308 - 607172
Alignment:
Q  36 ataatgtcctttgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcata 134  Q
    |||||| || ||||||||||||||||| || || |||||||||||   | ||| |||||||||||| ||||||||||      |||||||||||||| ||    
T  607308 ataatggcccttgtaacaccccgttttcccaacataaaaatttcatttaaataatcagagtattcatcacataaacg------gaatgctacacttctta 607215  T
Q  135 aaa-tcataaatgagataattaattaattatccttcaacataa 176  Q
    ||| |||||||| |||||| |||  | ||||||||||||||||    
T  607214 aaattcataaataagataaataacaatttatccttcaacataa 607172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 14571805 - 14571860
Alignment:
Q  41 gtcctttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagta 96  Q
    ||||| |||||||||||||||| || || |||||||||||||||||||||||||||    
T  14571805 gtcctgtgtaacaccccgttttcccaacataaaaatttcaaacatatatcagagta 14571860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 14577742 - 14577692
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagta 96  Q
    ||||||||||||||||| || || |||||||||||||||||||||||||||    
T  14577742 ttgtaacaccccgttttcccaacataaaaatttcaaacatatatcagagta 14577692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 285
Target Start/End: Original strand, 16096699 - 16096779
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    |||||| |||| ||||| |||| |||||||||||||||||| ||||||||||||||| ||||||| ||| |||||||||||||    
T  16096699 ataagtcttggcacgcaggccttatcaaaacatctcataaattcagttaaacaactt-atcattt-aaattcataaaacaaat 16096779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 30025258 - 30025316
Alignment:
Q  39 atgtcctttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    |||||| ||||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  30025258 atgtccgttgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagta 30025316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 30027741 - 30027799
Alignment:
Q  39 atgtcctttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    |||||| ||||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  30027741 atgtccgttgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagta 30027799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8545469 - 8545514
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||    
T  8545469 tatcttatttactgtttagtgaaatagttaatttgataatgtcctt 8545514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 43925097 - 43925162
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacg 111  Q
    |||||||||||||||| || || ||||||||||| ||||  |||||||||||||||||||||||||    
T  43925097 tgtaacaccccgttttcccaacataaaaatttcataacaattatcagagtattcaacacataaacg 43925162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 17498607 - 17498663
Alignment:
Q  125 acacttcataaaa-tcataaatgagataattaattaattatccttcaacataaatca 180  Q
    ||||||||||||| |||||||  |||||||||| |||||||||||||||||||||||    
T  17498607 acacttcataaaaatcataaaacagataattaactaattatccttcaacataaatca 17498663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 17661829 - 17661732
Alignment:
Q  67 acttaaaaatttcaaa-catatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatgagataattaattaattatc 165  Q
    |||| ||||||||||| ||  |||||||||||||||||||||||||      |||||||||| ||| |||||||||||||   |||||||| ||||||||    
T  17661829 acttcaaaatttcaaaacaattatcagagtattcaacacataaacg------gaatgctacatttcttaaaatcataaatagaataattaactaattatc 17661736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 146
Target Start/End: Original strand, 21836450 - 21836546
Alignment:
Q  47 tgtaacaccccgtttttccta-cttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataa 143  Q
    ||||||||||||||||||| | ||||||||||||| ||||  ||||||||||||||||| |      |||||||||||||||||||| ||||| ||||||    
T  21836450 tgtaacaccccgtttttcccaacttaaaaatttcataacaattatcagagtattcaacata------taaacggaatgctacacttcttaaaattcataa 21836543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 27901533 - 27901647
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataa 143  Q
    ||||||||||||||||| || || ||||||||||| || |  |||||||||||||| |||||||       | |||||||||||||| ||||| | ||||    
T  27901533 ttgtaacaccccgttttcccaacataaaaatttcataataattatcagagtattcagcacataa-------cagaatgctacacttcttaaaaataataa 27901625  T
Q  144 atgagataattaattaattatc 165  Q
    ||||||||||||| ||||||||    
T  27901626 atgagataattaactaattatc 27901647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 8498697 - 8498747
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtat 97  Q
    ||||||||||||||||||| |||||||||||||| | ||| ||||||||||    
T  8498697 tgtaacaccccgtttttccaacttaaaaatttcacatataaatcagagtat 8498747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 14447395 - 14447457
Alignment:
Q  114 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  14447395 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 14447457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 17487135 - 17487181
Alignment:
Q  134 aaaatcataaatgagataattaattaattatccttcaacataaatca 180  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||    
T  17487135 aaaatcataaaacagataattaactaattatccttcaacataaatca 17487181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 22111311 - 22111188
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    ||||||||||||||||||| || ||||||||||| ||||  |||||||||||| |||||        ||||| ||||||| ||||| | |||||||||||    
T  22111311 tgtaacaccccgtttttccaacataaaaatttcataacaattatcagagtatttaacac--------aaacgaaatgctaaacttcttaaaaatcataaa 22111220  T
Q  145 tgagataattaattaattatccttcaacataa 176  Q
    |||||||| |||  | ||||||||||| ||||    
T  22111219 tgagataaataacaatttatccttcaatataa 22111188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 23084060 - 23084010
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacat-atatcagagta 96  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||||||||    
T  23084060 tgtaacatcccgtttttccaacttaaaaatttcaaacataatatcagagta 23084010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 30023990 - 30024048
Alignment:
Q  39 atgtcctttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    |||||| |||||||||| |||||| || ||||||||||||||||||||| |||||||||    
T  30023990 atgtccgttgtaacacctcgttttcccaacttaaaaatttcaaacatataatcagagta 30024048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 30029010 - 30029068
Alignment:
Q  39 atgtcctttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    |||||| |||||||||||||||||  | ||||||||||||||||||||| |||||||||    
T  30029010 atgtccgttgtaacaccccgttttcacaacttaaaaatttcaaacatataatcagagta 30029068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 51157698 - 51157764
Alignment:
Q  110 cgtaaacggaatgctacacttcat-----aaaatcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||||||||||||| |     |||||||||||||| |||||||| ||||||||||||||    
T  51157698 cgtaaacggaatgctacacttctttttctaaaatcataaatgaaataattaactaattatccttcaa 51157764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 14972060 - 14972192
Alignment:
Q  47 tgtaacaccccgtttttccta-cttaaaaatttcaaacata-tatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||||    || ||||  || ||||||| ||   ||||||| ||| ||||| ||    
T  14972060 tgtaacaccccgtttttcccaacttaaaaatttcaaacatattatcagagt----aaaacat-cacataaacgggatatcacacttcttaagatcatgaa 14972154  T
Q  145 tgagataattaattaattatcct--tcaacataaatca 180  Q
     ||||||||||| ||||||||||  |||||||||||||    
T  14972155 agagataattaactaattatcctcatcaacataaatca 14972192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29674117 - 29674072
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    |||||| |||||| ||||||||||||||||||||||||| ||||||    
T  29674117 tatcttatttactgtttagtgaaatagttaatttgataaagtcctt 29674072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 54587613 - 54587669
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat--atcagagtattca 100  Q
    |||||||||||| |||| || |||||||||||||||||||||  |||||||||||||    
T  54587613 ttgtaacaccccattttcccgacttaaaaatttcaaacatattaatcagagtattca 54587669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 12398561 - 12398621
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||| |||| ||||| |||||||||||| |||||||||| |||||||||||||||| ||||    
T  12398561 aagtcttggcacgcaggcctcatcaaaatatctcataaattcagttaaacaacttattcat 12398621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 15467218 - 15467280
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcataa---atcagttaaacaacttaatcat 265  Q
    |||| |||| ||||| ||||||||||||||||||||||    |||||||||||||||||||||    
T  15467218 aagtcttggcacgcaggcctcatcaaaacatctcataattgttcagttaaacaacttaatcat 15467280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 18368537 - 18368474
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacg 111  Q
    |||||||||||||||| || |||||||||||||| | ||| ||||||||||| || |||||||||    
T  18368537 tgtaacaccccgttttcccaacttaaaaatttcacatataaatcagagtatttaa-acataaacg 18368474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 18702026 - 18701974
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    ||||||||||||||||| || |||||||||||||| | ||| |||||||||||    
T  18702026 ttgtaacaccccgttttcccaacttaaaaatttcacatataaatcagagtatt 18701974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 3395816 - 3395765
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    |||||||||||||||| || |||||||||||||| | ||| |||||||||||    
T  3395816 tgtaacaccccgttttcccaacttaaaaatttcacatataaatcagagtatt 3395765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 265
Target Start/End: Complemental strand, 12936398 - 12936343
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||| ||||| |||||||||||| |||||||||| |||||||||||||||| ||||    
T  12936398 ttggcacgcaggcctcatcaaaatatctcataaattcagttaaacaacttattcat 12936343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 15448908 - 15448849
Alignment:
Q  113 aaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaa 171  Q
    ||||||||||||||||||||| ||||||||||| |  |||||||| ||||| ||||||||    
T  15448908 aaacggaatgctacacttcataaaaatcataaagggaataattaactaattttccttcaa 15448849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 43891259 - 43891208
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    |||||||||||||||| || |||||||||||||| | ||| |||||||||||    
T  43891259 tgtaacaccccgttttcccaacttaaaaatttcacatataaatcagagtatt 43891208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 265
Target Start/End: Complemental strand, 49390913 - 49390858
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaat-cagttaaacaacttaatcat 265  Q
    |||| ||||| |||||||||||| |||| |||||| ||||||||||||||||||||    
T  49390913 ttggcacgcaggcctcatcaaaatatcttataaattcagttaaacaacttaatcat 49390858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 265
Target Start/End: Complemental strand, 49668830 - 49668775
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||| ||||| |||||||||||| |||||||||| |||||||||||||||| ||||    
T  49668830 ttggcacgcaagcctcatcaaaatatctcataaattcagttaaacaacttattcat 49668775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 11425655 - 11425605
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacata-tatcagagta 96  Q
    |||||| ||||||||| || |||||||||||||||||||| ||||||||||    
T  11425655 tgtaacgccccgttttcccaacttaaaaatttcaaacatattatcagagta 11425605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 17661661 - 17661619
Alignment:
Q  223 cctcatcaaaacatctcataaat-cagttaaacaacttaatca 264  Q
    |||||||||| |||||||||||| |||||||||||||||||||    
T  17661661 cctcatcaaatcatctcataaattcagttaaacaacttaatca 17661619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 23273931 - 23273985
Alignment:
Q  112 taaacggaatgctacacttcataaa-atcataaatgagataattaattaattatc 165  Q
    ||||||||||||||||||||  ||| || ||||||||||||||||| ||||||||    
T  23273931 taaacggaatgctacacttctaaaatataataaatgagataattaactaattatc 23273985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 25477312 - 25477262
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    |||||||||||||||| || |||||||||||| |||||||| |||||||||    
T  25477312 tgtaacaccccgttttcccaacttaaaaattttaaacatataatcagagta 25477262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 28193875 - 28193909
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca 80  Q
    |||||||||||||||||||| ||||||||||||||    
T  28193875 ttgtaacaccccgtttttccaacttaaaaatttca 28193909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 55319344 - 55319306
Alignment:
Q  133 taaaatcataaatgagataattaattaattatccttcaa 171  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  55319344 taaaatcataaatggaataattaattaattatccttcaa 55319306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 15061054 - 15061095
Alignment:
Q  222 gcctcatcaaaacatctcataaa-tcagttaaacaacttaat 262  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  15061054 gcctcatcaaaacgtctcataaattcagttaaacaacttaat 15061095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 15458714 - 15458662
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagta 96  Q
    ||||||||||||||||| || |||||||||||||  |||||| ||||||||||    
T  15458714 ttgtaacaccccgttttcccaacttaaaaatttcataaacatttatcagagta 15458662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 20282755 - 20282792
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgata 38  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  20282755 tatcttatttactgtttagtgaaatagttaatttgata 20282792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 13211099 - 13211039
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||| |||| |||||  ||||||||||| |||||||||| |||||||||||||||| ||||    
T  13211099 aagtcttggcacgcagacctcatcaaaatatctcataaaatcagttaaacaacttattcat 13211039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 265
Target Start/End: Original strand, 16103157 - 16103201
Alignment:
Q  222 gcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||||||||||| |||||||||| |||||||||||||||| ||||    
T  16103157 gcctcatcaaaatatctcataaattcagttaaacaacttattcat 16103201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 22650790 - 22650858
Alignment:
Q  109 acgtaaacggaatgctacacttcat-----aaaatcataaatgagataattaa-ttaattatccttcaa 171  Q
    ||||||||||||||||||||||| |     |||||||||||||| |||||||| | |||||||||||||    
T  22650790 acgtaaacggaatgctacacttcttttcctaaaatcataaatgaaataattaactaaattatccttcaa 22650858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 24154090 - 24154058
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaa 144  Q
    |||||||||||||||||||| ||||||||||||    
T  24154090 taaacggaatgctacacttcttaaaatcataaa 24154058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 265
Target Start/End: Original strand, 26682703 - 26682759
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcat-aaatcagtt-aaacaacttaatcat 265  Q
    |||| ||||| |||||||||||||| ||||| ||||||||| |||||||||||||||    
T  26682703 ttggcacgcaggcctcatcaaaacacctcataaaatcagttcaaacaacttaatcat 26682759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 30176348 - 30176316
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaa 144  Q
    |||||||||||||||||||| ||||||||||||    
T  30176348 taaacggaatgctacacttcttaaaatcataaa 30176316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 31225870 - 31225810
Alignment:
Q  112 taaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||||||||||| | ||||||||||| |  |||||||| ||||||||| ||||    
T  31225870 taaacggaatgctacacttcttaaaaatcataaacggaataattaactaattatccatcaa 31225810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 1e-38; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 47 - 197
Target Start/End: Complemental strand, 14982742 - 14982598
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatg 146  Q
    |||||||||| ||||| || ||||||||| ||||||||||||| | ||||||||||||||||       ||||||||||||||||||||||||||||||     
T  14982742 tgtaacaccctgttttcccaacttaaaaagttcaaacatatatgaaagtattcaacacataa-------cggaatgctacacttcataaaatcataaata 14982650  T
Q  147 agataattaattaattatccttcaacataaatc-aattccaagacattgcag 197  Q
    |||||||||| |||||||||||||||||||||| |||||||| |||||||||    
T  14982649 agataattaactaattatccttcaacataaatcaaattccaaaacattgcag 14982598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 47 - 197
Target Start/End: Complemental strand, 15412353 - 15412209
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatg 146  Q
    |||||||||| ||||| || ||||||||| ||||||||||||| | ||||||||||||||||       ||||||||||||||||||||||||||||||     
T  15412353 tgtaacaccctgttttcccaacttaaaaagttcaaacatatatgaaagtattcaacacataa-------cggaatgctacacttcataaaatcataaata 15412261  T
Q  147 agataattaattaattatccttcaacataaatc-aattccaagacattgcag 197  Q
    |||||||||| |||||||||||||||||||||| |||||||| |||||||||    
T  15412260 agataattaactaattatccttcaacataaatcaaattccaaaacattgcag 15412209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 44013349 - 44013477
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||      ||||||||||||||||  ||| ||||||||    
T  44013349 tgtaacaccccgttttcccaacttaaaaatttcaaacatattatcagagtattcaacacataaa------cggaatgctacacttctaaaagtcataaat 44013442  T
Q  146 gagataattaattaattatccttcaacataaatca 180  Q
    ||||||||||| |||||||||||||||||||||||    
T  44013443 gagataattaactaattatccttcaacataaatca 44013477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 47 - 197
Target Start/End: Original strand, 47830947 - 47831092
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaa-catatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || |||||||||||||||| ||| |||||||||| ||||||||||||      ||||||||||||||||  |||||||| ||     
T  47830947 tgtaacaccccgttttcccaacttaaaaatttcaaaacatttatcagagtaatcaacacataaa------cggaatgctacacttctaaaaatcatgaac 47831040  T
Q  146 gagataattaattaattatccttcaacataaatcaattccaagacattgcag 197  Q
    ||||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  47831041 gagataattaactaattatccttcaacataaatcaattcctaaacattgcag 47831092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 50 - 265
Target Start/End: Original strand, 18004811 - 18005038
Alignment:
Q  50 aacaccccgtttttcctacttaaaaatttcaaa-catatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatgag 148  Q
    ||||||| ||||| || |||||||||||||||| |||  ||||||||| |||||||||||||| ||      ||||||||||| ||||||||||||||||    
T  18004811 aacacccagttttcccaacttaaaaatttcaaaacattaatcagagtaatcaacacataaacgaaa------tgctacacttc-taaaatcataaatgag 18004903  T
Q  149 ataattaattaattatccttcaacataaatcaattccaagacattgcagggaatt-----------------ataagttttggtacgcatgcctcatcaa 231  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||| | |||                 |||||| |||| |||||||||| |||||    
T  18004904 ataattaactaattatccttcaacataaatcaattccaaaacattgcagcggattaagttcatcaacataaaataagtcttggcacgcatgccttatcaa 18005003  T
Q  232 aacatctcataaa-tcagttaaacaacttaatcat 265  Q
    ||||||||||||| |||||||||||||||||||||    
T  18005004 aacatctcataaattcagttaaacaacttaatcat 18005038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 47 - 197
Target Start/End: Complemental strand, 9391178 - 9391033
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || ||||||||||||||||||||| ||||||||| | | || |||||||      ||||||||||||||  ||||||||||||    
T  9391178 tgtaacaccccgttttcccaacttaaaaatttcaaacatattatcagagtaataagcatataaacg------gaatgctacacttctaaaaatcataaat 9391085  T
Q  146 gagataattaattaattatccttcaacataaatcaattccaagacattgcag 197  Q
    ||||||||||| ||||||||||||| ||||| |||||||||| |||||||||    
T  9391084 gagataattaactaattatccttcagcataattcaattccaaaacattgcag 9391033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 175
Target Start/End: Complemental strand, 16220692 - 16220568
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacata--tatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    |||||||||||||||| || |||||||||||||| ||| |  ||||| |||||||||||||||||||      ||||||||||||||  |||||||||||    
T  16220692 tgtaacaccccgttttcccaacttaaaaatttcatacacaattatcatagtattcaacacataaacg------gaatgctacacttctaaaaatcataaa 16220599  T
Q  145 tgagataattaattaattatccttcaacata 175  Q
    |||||||||||| ||||||||||||||||||    
T  16220598 tgagataattaactaattatccttcaacata 16220568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 66916 - 67044
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||||| |||||| || ||||||||||| |||||||||| |||||||||||||||||||||      |||||||  ||||||||||||||||||||     
T  66916 tgtaacacctcgttttcccaacttaaaaattccaaacatataatcagagtattcaacacataaa------cggaatgacacacttcataaaatcataaac 67009  T
Q  146 gagataattaattaattatccttcaacataaatca 180  Q
    ||||||||||| |||||||||||| ||| ||||||    
T  67010 gagataattaactaattatccttcgacacaaatca 67044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 169
Target Start/End: Original strand, 15115339 - 15115457
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || |||||||||||||| ||||||||||| |||||||||||||      | |||||||||||||||||| ||||||||||||    
T  15115339 ttgtaacaccccgttttcccaacttaaaaatttcataacatatatcaaagtattcaacaca------tgaacggaatgctacacttcttaaaatcataaa 15115432  T
Q  145 tgagataattaattaattatccttc 169  Q
    |   |||||||| ||||||||||||    
T  15115433 tagaataattaactaattatccttc 15115457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 14158159 - 14158035
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || || ||||||||| | ||||| |||| ||||||||||||||||||||      |||||||||||||| |||||||||||||    
T  14158159 tgtaacaccccgttttcccaacataaaaattttataacatttatccgagtattcaacacataaacg------gaatgctacacttcttaaaatcataaat 14158066  T
Q  146 gagataattaattaattatccttcaacataa 176  Q
    ||||||| |||  | ||||||||||||||||    
T  14158065 gagataaataacaatttatccttcaacataa 14158035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 19487951 - 19487838
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    |||||||||||||||| || |||||||||||||| |||| |||||||||||||||||||||       |||||||||||||||||| | ||||||||| |    
T  19487951 tgtaacaccccgttttcccaacttaaaaatttcataacaaatatcagagtattcaacacat-------aacggaatgctacacttcttaaaaatcataga 19487859  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  19487858 tgagataattaactaattatc 19487838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 46 - 177
Target Start/End: Complemental strand, 19158974 - 19158848
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacata-tatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    |||||||||||| |||| || |||||||||||||||||||| |||||||||| ||||||||      ||||||||||||||||||||  ||  |||||||    
T  19158974 ttgtaacaccccattttcccaacttaaaaatttcaaacatattatcagagtaatcaacaca------taaacggaatgctacacttctaaaggtcataaa 19158881  T
Q  145 tgagataattaattaattatccttcaacataaa 177  Q
    |||| ||||||| |||||| ||||| |||||||    
T  19158880 tgaggtaattaaataattaaccttcgacataaa 19158848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 46 - 177
Target Start/End: Complemental strand, 20758373 - 20758247
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacata-tatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    |||||||||||| |||| || |||||||||||||||||||| |||||||||| ||||||||      ||||||||||||||||||||  ||  |||||||    
T  20758373 ttgtaacaccccattttcccaacttaaaaatttcaaacatattatcagagtaatcaacaca------taaacggaatgctacacttctaaaggtcataaa 20758280  T
Q  145 tgagataattaattaattatccttcaacataaa 177  Q
    |||| ||||||| |||||| ||||| |||||||    
T  20758279 tgaggtaattaaataattaaccttcgacataaa 20758247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 45 - 175
Target Start/End: Complemental strand, 37729079 - 37728953
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtatt-caacacataaacgtaaacggaatgctacacttcataaaatcata 142  Q
    ||||||||||||||||||||| |||||||||||||| || |  |||||||||||| |||||||||||||      |||||||||||||  ||||||||||    
T  37729079 tttgtaacaccccgtttttccaacttaaaaatttcataataattatcagagtatttcaacacataaacg------gaatgctacacttattaaaatcata 37728986  T
Q  143 aatgagataattaattaattatccttcaacata 175  Q
    |||||||||| |||  | |||||||||||||||    
T  37728985 aatgagataaataacaatttatccttcaacata 37728953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 12900468 - 12900593
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || || ||||||||||| ||||| ||| |||| | ||||||||||||      |||||||||||||||| ||||||||||||    
T  12900468 ttgtaacaccccgttttcccaacataaaaatttcataacatttataagagaaatcaacacataaa------cggaatgctacacttcttaaaatcataaa 12900561  T
Q  145 tgagataattaattaattatccttcaacataa 176  Q
    |||||||| |||  | ||||||||||||||||    
T  12900562 tgagataaataacaatttatccttcaacataa 12900593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 37726240 - 37726115
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtatt-caacacataaacgtaaacggaatgctacacttcataaaatcataa 143  Q
    |||||||||| ||||||||| |||||||||||||| || |  |||||||||||| |||||||||||||      |||||||||||||| |||||||||||    
T  37726240 ttgtaacacctcgtttttccaacttaaaaatttcataataattatcagagtatttcaacacataaacg------gaatgctacacttcttaaaatcataa 37726147  T
Q  144 atgagataattaattaattatccttcaacata 175  Q
    ||||||||| |||  | |||||||||||||||    
T  37726146 atgagataaataacaatttatccttcaacata 37726115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 285
Target Start/End: Complemental strand, 812099 - 811851
Alignment:
Q  49 taacaccccgtttttcctacttaaaaatttcaaa-catatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatga 147  Q
    ||||| ||||||||  | |||||||||||||||| ||| |||||||||| |||||| ||||||       ||||| |||||||| ||||||||||||| |    
T  812099 taacatcccgttttctcaacttaaaaatttcaaaacatttatcagagtaatcaacatataaaca------gaatgttacacttc-taaaatcataaataa 812007  T
Q  148 gataattaattaattatccttcaacataaatcaattccaagacattgcagggaatta----------------taagttttggtacgcatgcctcatcaa 231  Q
    ||||||||| |||||||||||||||||||   |||||||| ||||| ||| | || |                ||||| |||||||||||||||||||||    
T  812006 gataattaactaattatccttcaacataatcgaattccaaaacattacagcggataaagttcatcatcataaataagtcttggtacgcatgcctcatcaa 811907  T
Q  232 aacatctcata---aatcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    |||||||||||   | |||||||||| |||||||||||| ||| |||||||||||||    
T  811906 aacatctcataattattcagttaaactacttaatcattt-aaattcataaaacaaat 811851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 29329904 - 29329791
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataaa 144  Q
    |||||||||||||||| || || ||||||||||| ||||  ||||||||||||||||||||||       |||||||||||||||| ||||| |||||||    
T  29329904 tgtaacaccccgttttcccaacataaaaatttcataacaattatcagagtattcaacacataa-------cggaatgctacacttcttaaaaatcataaa 29329812  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  29329811 tgagataattaactaattatc 29329791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 171
Target Start/End: Original strand, 44115679 - 44115799
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataa 143  Q
    ||||||||||||||||| || || ||||||||||| ||||  ||||||||||||||||||||       |||||||||||||||||| | ||||||||||    
T  44115679 ttgtaacaccccgttttcccaacataaaaatttcataacaattatcagagtattcaacacat-------aacggaatgctacacttcttgaaaatcataa 44115771  T
Q  144 atgagataattaattaattatccttcaa 171  Q
     |||||||||||| |||||||| |||||    
T  44115772 gtgagataattaactaattatctttcaa 44115799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 169
Target Start/End: Original strand, 15111765 - 15111882
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || ||| |||||||||| ||||||||||||||| |||||||||      | |||||||||||||||||| |||||||||||||    
T  15111765 tgtaacaccccgttttcccaactaaaaaatttcataacatatatcagagtcttcaacaca------tgaacggaatgctacacttcttaaaatcataaat 15111858  T
Q  146 gagataattaattaattatccttc 169  Q
       |||||||| |||||| |||||    
T  15111859 agaataattaactaattaaccttc 15111882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 11301570 - 11301694
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || ||||||||||||||   |  || |||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  11301570 tgtaacaccccgttttcccgacttaaaaatttcatttaattaatcagagtattcaacat------gtaaacggaatgctacacttcataaaatcataaat 11301663  T
Q  146 gagataattaattaa-ttatccttcaacata 175  Q
     || ||||||| ||| |||||||||||||||    
T  11301664 aagttaattaactaatttatccttcaacata 11301694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 23667206 - 23667139
Alignment:
Q  109 acgtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 175  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  23667206 acgtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 23667139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 26211177 - 26211290
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    |||||||||||||||| || || ||||||||||| |||| |||||||||||||| ||||||       |||| ||||||||||||| | |||||||||||    
T  26211177 tgtaacaccccgttttcccaacataaaaatttcataacaaatatcagagtattcgacacat-------aacgaaatgctacacttcttaaaaatcataaa 26211269  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  26211270 tgagataattaactaattatc 26211290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 15165463 - 15165528
Alignment:
Q  111 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 175  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  15165463 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 15165528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 22072208 - 22072261
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatc 165  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  22072208 taaacggaatgctacacttcttaaaatcataaatgagataattaactaattatc 22072261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 175
Target Start/End: Complemental strand, 10898828 - 10898704
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || ||||||||||||||   |  || |||||||||||||||       ||| |||||||||||||||||||||||||||||||    
T  10898828 tgtaacaccccgttttcccgacttaaaaatttcatttaagtaatcagagtattcaacat------gtagacggaatgctacacttcataaaatcataaat 10898735  T
Q  146 gagataattaattaa-ttatccttcaacata 175  Q
     || ||||||| ||| |||||||||||||||    
T  10898734 aagttaattaactaatttatccttcaacata 10898704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 16055476 - 16055591
Alignment:
Q  49 taacaccccgtttttcctacttaaaaatttcaaac-atatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatga 147  Q
    |||||||||||||| || || |||||||||||||  || ||| ||||||  ||||||||||||       |||||||||||||| ||||| |||||||||    
T  16055476 taacaccccgttttcccaacataaaaatttcaaaatatttatgagagtaaacaacacataaacc------gaatgctacacttcttaaaaccataaatga 16055569  T
Q  148 gataattaattaattatccttc 169  Q
    ||||||||| ||||||||||||    
T  16055570 gataattaactaattatccttc 16055591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 175
Target Start/End: Complemental strand, 6320814 - 6320689
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || ||||||||||||||   |  || |||||||||||||||       ||||||||||||||||||||||||||||||||| |    
T  6320814 tgtaacaccccgttttcccgacttaaaaatttcatttaattaatcagagtattcaacat------gtaaacggaatgctacacttcataaaatcataatt 6320721  T
Q  146 gagataattaattaa--ttatccttcaacata 175  Q
     || ||||||| |||  |||||||||||||||    
T  6320720 aagttaattaactaattttatccttcaacata 6320689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 14564440 - 14564505
Alignment:
Q  111 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 175  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||| ||| |||||||||||||||    
T  14564440 gtaaacggaatgctacacttcataacatcataaataagttaattaactaatttatccttcaacata 14564505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 46 - 172
Target Start/End: Complemental strand, 15009455 - 15009333
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataa 143  Q
    |||||||||| |||||| || || ||||||||||| || |  |||||||||||||||||||||||||      |||||||||||||| | ||||||||||    
T  15009455 ttgtaacacctcgttttcccaacataaaaatttcataataattatcagagtattcaacacataaacg------gaatgctacacttctttaaaatcataa 15009362  T
Q  144 atgagataattaattaattatccttcaac 172  Q
    ||||||||| |||  | ||||||||||||    
T  15009361 atgagataaataacaatttatccttcaac 15009333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 47020705 - 47020660
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  47020705 tatcttgtttactgtttagtgaaatagttaatttgataatgtcctt 47020660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 2283038 - 2282975
Alignment:
Q  222 gcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| |||||    
T  2283038 gcctcatcaaaacatctcataaattcagttaaacaacttaatcattt-aaattcataaatcaaat 2282975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 169
Target Start/End: Complemental strand, 12256802 - 12256683
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcata 142  Q
    ||||||||||||||||||||| || |||||||| || ||||| |||||||||| |||||||||       |||||||||||||||||| | ||||||||     
T  12256802 tttgtaacaccccgtttttccaacataaaaattgcataacatttatcagagtaatcaacacat-------aacggaatgctacacttcttaaaaatcatc 12256710  T
Q  143 aatgagataattaattaattatccttc 169  Q
    |||||||||| |||  | |||||||||    
T  12256709 aatgagataaataacaatttatccttc 12256683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 15164389 - 15164334
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaa 261  Q
    |||| |||| ||||| |||||||||||||||||||||||| |||||||||||||||    
T  15164389 aagtcttggcacgcaggcctcatcaaaacatctcataaattagttaaacaacttaa 15164334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 2283230 - 2283115
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||| ||||| || |||||||  ||||| ||||| ||| |||||||||||||||||| ||      |||||||||||||| |||||||||||||    
T  2283230 tgtaacaccctgttttcccaacttaaa--tttcataacatttattagagtattcaacacataagcg------gaatgctacacttcttaaaatcataaat 2283139  T
Q  146 gagataattaattaattatccttc 169  Q
       |||||||| ||||||||||||    
T  2283138 agaataattaactaattatccttc 2283115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 24185105 - 24185149
Alignment:
Q  2 atcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    |||||||||||| |||||| |||||||||||||||||||||||||    
T  24185105 atcttgtttactgtttagtaaaatagttaatttgataatgtcctt 24185149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 42376945 - 42376831
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttc-ataaaatcataa 143  Q
    ||||||||||||||||||| |||||||||||||  ||| || ||||||||||  ||||||||       ||| |||||||||||||| | || || ||||    
T  42376945 tgtaacaccccgtttttccaacttaaaaatttcataaatatttatcagagtaaacaacacat-------aacagaatgctacacttctaaaatataataa 42376853  T
Q  144 atgagataattaattaattatc 165  Q
    ||||||||||||| ||||||||    
T  42376852 atgagataattaactaattatc 42376831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 3565219 - 3565095
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcat-aa 143  Q
    ||||||| ||||||||||| |||||||||||||  |||||| ||||||||||  ||||||||       ||| |||||||||||||| ||||||||| ||    
T  3565219 tgtaacatcccgtttttccaacttaaaaatttcataaacatttatcagagtaaacaacacat-------aacagaatgctacacttc-taaaatcataaa 3565128  T
Q  144 atgagataattaattaattatccttcaacataa 176  Q
    |  ||||||||||  ||||||| ||||||||||    
T  3565127 aacagataattaacaaattatctttcaacataa 3565095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 20348212 - 20348255
Alignment:
Q  3 tcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    ||||||||||| |||||| |||||||||||||||||||||||||    
T  20348212 tcttgtttactgtttagtaaaatagttaatttgataatgtcctt 20348255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 29794515 - 29794581
Alignment:
Q  111 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa--ttatccttcaacata 175  Q
    ||||||||||||||| ||||||||||||||||| | || ||||||| |||  |||||||||||||||    
T  29794515 gtaaacggaatgctatacttcataaaatcataattaagttaattaactaattttatccttcaacata 29794581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 29798334 - 29798400
Alignment:
Q  111 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa--ttatccttcaacata 175  Q
    ||||||||||||||| ||||||||||||||||| | || ||||||| |||  |||||||||||||||    
T  29798334 gtaaacggaatgctatacttcataaaatcataattaagttaattaactaattttatccttcaacata 29798400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 14194336 - 14194394
Alignment:
Q  207 agttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 265  Q
    |||||||| ||||| |||||||||| |  |||||||||||||||||||||| |||||||    
T  14194336 agttttggcacgcaggcctcatcaagaagtctcataaatcagttaaacaacataatcat 14194394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 15087260 - 15087147
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataaa 144  Q
    |||||||| |||||||| | || ||||||||||| ||||  ||||||||||||||||| ||||       |||||||||||| ||| ||||| |||||||    
T  15087260 tgtaacactccgttttttcaacataaaaatttcataacaattatcagagtattcaacaaataa-------cggaatgctacatttcttaaaaatcataaa 15087168  T
Q  145 tgagataattaattaattatc 165  Q
    | |||||||||| ||||||||    
T  15087167 taagataattaactaattatc 15087147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 15144804 - 15144754
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaa 261  Q
    |||| ||||| ||||||||||||||||| |||||| |||||||||||||||    
T  15144804 ttggcacgcaggcctcatcaaaacatcttataaattagttaaacaacttaa 15144754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 18155632 - 18155574
Alignment:
Q  207 agttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 265  Q
    |||||||| ||||| |||||||||| |  |||||||||||||||||||||| |||||||    
T  18155632 agttttggcacgcaggcctcatcaagaagtctcataaatcagttaaacaacataatcat 18155574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 18870541 - 18870603
Alignment:
Q  114 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  18870541 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 18870603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 10065076 - 10064961
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat--atcagagtattcaacacataaacgtaaacggaatgctacactt-cataaaatcata 142  Q
    ||||||||||||||||| || |||||||||||||| | ||||  |||||||||  ||||| ||||       ||||||||||||||| || || || |||    
T  10065076 ttgtaacaccccgttttcccaacttaaaaatttcataaatatttatcagagtaaacaacatataa-------cggaatgctacactttcaaaatataata 10064984  T
Q  143 aatgagataattaattaattatc 165  Q
    |||||||||||||| ||||||||    
T  10064983 aatgagataattaactaattatc 10064961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 42461125 - 42461188
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaac 110  Q
    |||||||||| |||||| || || ||||||||||| | ||| |||||||||||||||||||||||    
T  42461125 ttgtaacacctcgttttcccaacataaaaatttcacatata-atcagagtattcaacacataaac 42461188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 16578546 - 16578597
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    |||||||||||||||| || |||||||||||||| | ||| |||||||||||    
T  16578546 tgtaacaccccgttttcccaacttaaaaatttcacatataaatcagagtatt 16578597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 16587116 - 16587065
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    |||||||||||||||| || |||||||||||||| | ||| |||||||||||    
T  16587116 tgtaacaccccgttttcccaacttaaaaatttcacatataaatcagagtatt 16587065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 40442652 - 40442777
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    |||||||||||||||| || |||||||||||||  |||||| ||||||||||  ||||| ||       ||||||||   ||||||| |||||||  |||    
T  40442652 tgtaacaccccgttttcccaacttaaaaatttcataaacatttatcagagtaaacaacatat-------aacggaatatcacacttcttaaaatctcaaa 40442744  T
Q  145 tgagataattaattaattatccttcaacataaa 177  Q
      |||||| |||||| |||||||||||||||||    
T  40442745 atagataactaattatttatccttcaacataaa 40442777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 260
Target Start/End: Original strand, 67088 - 67138
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaactta 260  Q
    |||| ||||| |||| |||||||||||||||||| ||||||||||||||||    
T  67088 ttggcacgcaggccttatcaaaacatctcataaagtcagttaaacaactta 67138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 13636328 - 13636278
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    ||||||||||||||||||| |  |||||||||||||||||| |||||||||    
T  13636328 tgtaacaccccgtttttccaatataaaaatttcaaacatataatcagagta 13636278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 80
Target Start/End: Complemental strand, 2532121 - 2532088
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca 80  Q
    ||||||||||||||||||| ||||||||||||||    
T  2532121 tgtaacaccccgtttttccaacttaaaaatttca 2532088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 2834287 - 2834231
Alignment:
Q  47 tgtaacaccccgttttt-cctacttaaaaatttc--aaacatatatcagagtattca 100  Q
    ||||||||||||||||| || |||||||||||||  |||||| ||||||||||||||    
T  2834287 tgtaacaccccgtttttcccgacttaaaaatttcataaacatttatcagagtattca 2834231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 80
Target Start/End: Original strand, 12698027 - 12698060
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca 80  Q
    ||||||||||||||||||| ||||||||||||||    
T  12698027 tgtaacaccccgtttttccaacttaaaaatttca 12698060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 16403352 - 16403300
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagta 96  Q
    ||||||||||||||||| || |||||||||||||  |||||| ||||||||||    
T  16403352 ttgtaacaccccgttttcccaacttaaaaatttcataaacatttatcagagta 16403300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 32299816 - 32299869
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    |||||||||||| ||||| || |||||||||||||| | ||| |||||||||||    
T  32299816 tttgtaacaccctgttttcccaacttaaaaatttcacatataaatcagagtatt 32299869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 9643666 - 9643726
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||  ||||||| ||||| ||||||| || |||||||| ||||||||||||||    
T  9643666 taaacggaatgtcacacttcttaaaaatcataaacgaaataattaactaattatccttcaa 9643726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 11092365 - 11092425
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 171  Q
    ||||| |||||||||||||| ||||| |||||||||  |||||||| ||||| ||||||||    
T  11092365 taaacagaatgctacacttcttaaaaatcataaatggaataattaaataattttccttcaa 11092425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 12698185 - 12698245
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||| |||| ||||| |||||||||||| |||||||||| |||||| ||||||||| ||||    
T  12698185 aagtcttggcacgcaggcctcatcaaaatatctcataaattcagttgaacaacttattcat 12698245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 14275105 - 14275165
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 171  Q
    ||||||||||| |||||||| ||||| |||||||||  |||||||| ||||| ||||||||    
T  14275105 taaacggaatgttacacttcttaaaaatcataaatggaataattaactaattttccttcaa 14275165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 16220526 - 16220462
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaat----cagttaaacaacttaatcat 265  Q
    |||||| |||| ||||| ||||||||||| ||||||||||||    ||||||||||||||||||||    
T  16220526 ataagtcttggcacgcaggcctcatcaaa-catctcataaattattcagttaaacaacttaatcat 16220462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 16581293 - 16581345
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    |||||||| |||||||| || |||||||||||||| | ||| |||||||||||    
T  16581293 ttgtaacatcccgttttcccaacttaaaaatttcacatataaatcagagtatt 16581345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 16997557 - 16997617
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||  ||||||| ||||| |||||||||  |||||||||||||| ||||||||    
T  16997557 taaacggaatgtcacacttcttaaaaatcataaatggaataattaattaattttccttcaa 16997617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 18457294 - 18457262
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaa 144  Q
    |||||||||||||||||||| ||||||||||||    
T  18457294 taaacggaatgctacacttcttaaaatcataaa 18457262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 46 - 180
Target Start/End: Original strand, 5988 - 6117
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||      ||||||||||||||||  ||| |||||||    
T  5988 ttgtaacaccccgttttcccaacttaaaaatttcaaacatattatcagagtattcaacacataaa------cggaatgctacacttctaaaagtcataaa 6081  T
Q  145 tgagataattaattaattatccttcaacataaatca 180  Q
    |||||||||||| |||||||||||||||||||||||    
T  6082 tgagataattaactaattatccttcaacataaatca 6117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 79; Significance: 6e-37; HSPs: 3)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 46 - 178
Target Start/End: Complemental strand, 3598 - 3471
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||      |||||||||||||||||||||||||||    
T  3598 ttgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagtattcaacacataaacg------gaatgctacacttcataaaatcataaa 3505  T
Q  145 tgagataattaattaattatccttcaacataaat 178  Q
     ||||||||||| |||||||| ||| ||||||||    
T  3504 cgagataattaactaattatctttcgacataaat 3471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 285
Target Start/End: Complemental strand, 3425 - 3352
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||||||||| ||||||| ||| |||||||||||||    
T  3425 ttggcacgcaggcctcatcaaaacatctcataaattcagttaaacaactt-atcattt-aaattcataaaacaaat 3352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 4718 - 4780
Alignment:
Q  114 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  4718 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 4780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 18428 - 18556
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||      |||||||||||||||| ||||||||||||||||     
T  18428 tgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagtattcaacaca------taaacggaatgctacagttcataaaatcataaac 18521  T
Q  146 gagataattaattaattatccttcaacataaatca 180  Q
    | ||||||||| |||||||||||| ||||||||||    
T  18522 gggataattaactaattatccttcgacataaatca 18556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 18600 - 18673
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    |||| ||||| |||||||||||| |||||||||| ||||||||||||||| ||||||| ||| |||||||||||||    
T  18600 ttggcacgcaggcctcatcaaaatatctcataaattcagttaaacaactt-atcattt-aaattcataaaacaaat 18673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 75; Significance: 1e-34; HSPs: 5)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 46 - 197
Target Start/End: Original strand, 100710 - 100856
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || |||||||||||||||||||||| |||||||||||| || |||||||      ||||||||||||||| |||||||||||    
T  100710 ttgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagtattcatcatataaacg------gaatgctacacttca-aaaatcataaa 100802  T
Q  145 tgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 197  Q
    | |||||||||| ||||||||||||||| |||||| |||||||| |||||||||    
T  100803 taagataattaactaattatccttcaacgtaaatcaaattccaaaacattgcag 100856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 187
Target Start/End: Original strand, 99504 - 99639
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaa--catatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||| |||||| || ||||||||||||||||  ||| |||||||||| |||||||||||| |      |||||||||||||| |||| |||||||    
T  99504 tgtaacacctcgttttcccaacttaaaaatttcaaaaacatttatcagagtaatcaacacataaatg------gaatgctacacttc-taaattcataaa 99596  T
Q  145 tgagataattaattaattatccttcaacataaatcaattccaa 187  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  99597 tgagataattaactaattatcctccaacataaatcaattccaa 99639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 41034 - 40929
Alignment:
Q  70 taaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatgagataattaattaattatcctt 168  Q
    |||||||||||||||||| || ||||||||||||| |||||||      ||||||||||||||   || ||||||||||||||||||| |||||||||||    
T  41034 taaaaatttcaaacatattattagagtattcaacatataaacg------gaatgctacacttctagaagtcataaatgagataattaactaattatcctt 40941  T
Q  169 caacataaatca 180  Q
    ||||||||||||    
T  40940 caacataaatca 40929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 211 - 282
Target Start/End: Complemental strand, 40885 - 40814
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaaca 282  Q
    |||| ||||| |||| ||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||    
T  40885 ttggcacgcaggccttatcaaaacatctcataaatcagttctacaacttaatcatttaaaattcataaaaca 40814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 285
Target Start/End: Original strand, 99674 - 99752
Alignment:
Q  205 taagttttggtacgcatgcctcatcaaaacatctcata-aatcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    ||||| |||| ||||| ||||||||||||||||||||| | ||||||||||||| |||||||   ||| |||||||||||||    
T  99674 taagtcttggcacgcaggcctcatcaaaacatctcatagattcagttaaacaacataatcat---aaaatcataaaacaaat 99752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 180
Target Start/End: Original strand, 129079 - 129204
Alignment:
Q  49 taacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatga 147  Q
    ||||||| |||||| || ||||||||||||||||||||| |||||||||||||||||||||       ||||||||||||||||  ||||||||||||||    
T  129079 taacacctcgttttcccaacttaaaaatttcaaacatattatcagagtattcaacacataa-------cggaatgctacacttctaaaaatcataaatga 129171  T
Q  148 gataattaattaattatccttcaacataaatca 180  Q
    ||||||||| |||||||||||||||||||||||    
T  129172 gataattaactaattatccttcaacataaatca 129204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 118588 - 118463
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataaa 144  Q
    |||||||||||||||| || || ||||||||||| ||||  |||||||||||||||| ||||||||      |||||||||||||| ||||| ||| |||    
T  118588 tgtaacaccccgttttcccaacataaaaatttcataacaattatcagagtattcaacgcataaacg------gaatgctacacttcttaaaaatcacaaa 118495  T
Q  145 tgagataattaattaattatccttcaacataa 176  Q
    |||||||| |||  | ||||||||||||||||    
T  118494 tgagataaataacaatttatccttcaacataa 118463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 73; Significance: 2e-33; HSPs: 4)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 46 - 180
Target Start/End: Complemental strand, 15663 - 15534
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||| ||| || ||||||| ||||||||||||| ||||||||||||||||||||||||      |||||||||||||||||||||||||||    
T  15663 ttgtaacaccccgatttcccaacttaaatatttcaaacatattatcagagtattcaacacataaacg------gaatgctacacttcataaaatcataaa 15570  T
Q  145 tgagataattaattaattatccttcaacataaatca 180  Q
     | ||||||||| |||||||||||| ||||||||||    
T  15569 cgggataattaactaattatccttcgacataaatca 15534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 15490 - 15419
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaa 283  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||||||||| ||||||| ||| |||||||||||    
T  15490 ttggcacgcaagcctcatcaaaacatctcataaattcagttaaacaactt-atcattt-aaattcataaaacaa 15419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 84845 - 84794
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    ||||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  84845 ttgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagta 84794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 79333 - 79210
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||||||||||||| || |  ||||||||||| |||  |||||||||| ||| || ||||       |||||||||||||||| ||||||| ||||     
T  79333 ttgtaacaccccgttttcccaatataaaaatttcatacaattatcagagtaatcatcaaataa-------cggaatgctacacttcttaaaatcgtaaaa 79241  T
Q  146 gagataattaattaattatccttcaacataa 176  Q
     | ||||||||  ||||||| ||||||||||    
T  79240 caaataattaacaaattatctttcaacataa 79210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 9e-33; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 47 - 197
Target Start/End: Complemental strand, 22960480 - 22960334
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata--tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    |||||||||||||||| || ||||||||||||||||||||||  |||||||||||| || |||||||      ||||||||||||||| ||| |||||||    
T  22960480 tgtaacaccccgttttcccaacttaaaaatttcaaacatataaatcagagtattcatcatataaacg------gaatgctacacttca-aaagtcataaa 22960388  T
Q  145 tgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 197  Q
    | |||||||||| |||||||||||||||||||||| |||||||| |||||||||    
T  22960387 taagataattaactaattatccttcaacataaatcaaattccaaaacattgcag 22960334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 169
Target Start/End: Complemental strand, 26012988 - 26012870
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || |||||||||||||| ||||| |||||||||| ||||||||||||||      |||||||||||||| ||||||||||||    
T  26012988 ttgtaacaccccgttttcccaacttaaaaatttcataacatttatcagagtaatcaacacataaacg------gaatgctacacttcttaaaatcataaa 26012895  T
Q  145 tgagataattaattaattatccttc 169  Q
    |||||||||||| ||||||||||||    
T  26012894 tgagataattaactaattatccttc 26012870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 19668068 - 19668195
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || ||||||||||||||||| ||| |||| ||||||||||||||||       ||||||||||||||||  ||| ||||||||    
T  19668068 tgtaacaccccgttttcccaacttaaaaatttcaaacgtattatcaaagtattcaacacataa-------cggaatgctacacttctaaaagtcataaat 19668160  T
Q  146 gagataattaattaattatccttcaacataaatca 180  Q
    ||||||||||| |||||||||||||||||||||||    
T  19668161 gagataattaactaattatccttcaacataaatca 19668195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 21564709 - 21564836
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| |  ||||||||||| |||||||||| ||||||||||||||||||||       |||||||| ||||||||||||||||||||     
T  21564709 tgtaacaccccgttttcctaacttaaaaattccaaacatataatcagagtattcaacacataa-------cggaatgcaacacttcataaaatcataaac 21564801  T
Q  146 gagataattaattaattatccttcaacataaatca 180  Q
    ||||||||||| ||||||||||||  |||||||||    
T  21564802 gagataattaactaattatccttcggcataaatca 21564836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 169
Target Start/End: Original strand, 22141939 - 22142056
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || || ||||||||||| ||||| |||||||||| ||||||||||||      |||||||||||||||| ||||| |||||||    
T  22141939 tgtaacaccccgttttcccaacataaaaatttcataacatttatcagagtaatcaacacataaa------cggaatgctacacttcttaaaaacataaat 22142032  T
Q  146 gagataattaattaattatccttc 169  Q
    ||||||||||| ||||||||||||    
T  22142033 gagataattaactaattatccttc 22142056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 197
Target Start/End: Complemental strand, 29916540 - 29916395
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| |  |||||||| |||||||||||| ||||||||| ||| || | |||||      ||||||||||||||  ||||||||||||    
T  29916540 tgtaacaccccgttttcctaacttaaaattttcaaacatattatcagagtaatcagcatagaaacg------gaatgctacacttctaaaaatcataaat 29916447  T
Q  146 gagataattaattaattatccttcaacataaatcaattccaagacattgcag 197  Q
    ||||||||||| |||||||||||||| |||| |||||| ||| |||||||||    
T  29916446 gagataattaactaattatccttcaatataattcaatttcaaaacattgcag 29916395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 21742918 - 21742833
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcag 197  Q
    |||||||||||||||| |||  ||||||||||||||||||||||| ||||||||||||||||||| |||||| ||| |||||||||    
T  21742918 taaacggaatgctacaattctaaaaatcataaatgagataattaactaattatccttcaacataattcaatttcaaaacattgcag 21742833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 20032647 - 20032530
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || |||||||||||||| ||||| |||||||||||||||||||||      ||||||||| |||||||| |||||||||||||    
T  20032647 tgtaacaccccgttttcccaacttaaaaatttcataacatttatcagagtattcaacacata------aacggaatgatacacttcttaaaatcataaat 20032554  T
Q  146 gagataattaattaattatccttc 169  Q
       |||||||| ||||||||||||    
T  20032553 agaataattaactaattatccttc 20032530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 21330480 - 21330356
Alignment:
Q  49 taacaccccgtttttcctacttaaaaatttcaaa-catatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataaatg 146  Q
    ||||||||||||||  | || ||||||||||||| ||| |||||||||| |||||||||||||       |||||||||||||| ||||| |||||||||    
T  21330480 taacaccccgttttctcaacataaaaatttcaaaacatttatcagagtaatcaacacataaaca------gaatgctacacttcttaaaaatcataaatg 21330387  T
Q  147 agataattaattaattatccttcaacataaa 177  Q
    |||||||||| ||||||||||||||||||||    
T  21330386 agataattaactaattatccttcaacataaa 21330356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 43 - 165
Target Start/End: Complemental strand, 21731210 - 21731094
Alignment:
Q  43 cctttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcat 141  Q
    |||||||||||||||||||| || || ||||||||   |||| |||||||||||||||||||||       |||||||||||||||||| | ||||||||    
T  21731210 cctttgtaacaccccgttttcccaacataaaaattcataacaaatatcagagtattcaacacat-------aacggaatgctacacttcttaaaaatcat 21731118  T
Q  142 aaatgagataattaattaattatc 165  Q
    ||||||||||||||| ||||||||    
T  21731117 aaatgagataattaactaattatc 21731094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 43 - 165
Target Start/End: Complemental strand, 21809330 - 21809214
Alignment:
Q  43 cctttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcat 141  Q
    |||||||||||||||||||| || || ||||||||   |||| |||||||||||||||||||||       |||||||||||||||||| | ||||||||    
T  21809330 cctttgtaacaccccgttttcccaacataaaaattcataacaaatatcagagtattcaacacat-------aacggaatgctacacttcttaaaaatcat 21809238  T
Q  142 aaatgagataattaattaattatc 165  Q
    ||||||||||||||| ||||||||    
T  21809237 aaatgagataattaactaattatc 21809214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 173
Target Start/End: Complemental strand, 41862744 - 41862620
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataa 143  Q
    |||||||||||||||||| || ||||||||||||||   |  || |||||||||||||||       |||||||||||||||||||||||||||||||||    
T  41862744 tttgtaacaccccgttttcccgacttaaaaatttcatttaattaatcagagtattcaacat------gtaaacggaatgctacacttcataaaatcataa 41862651  T
Q  144 atgagataattaattaa-ttatccttcaaca 173  Q
    || |||||||||| ||| |||||||||||||    
T  41862650 ataagataattaactaatttatccttcaaca 41862620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 175
Target Start/End: Complemental strand, 5890650 - 5890526
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataaa 144  Q
    ||||||||||| |||| || ||||||||||||||||||||| ||||||||| ||| || ||||||       |||||||||||||||||||| |||||||    
T  5890650 tgtaacaccccattttcccaacttaaaaatttcaaacatattatcagagtaatcagcatataaact------gaatgctacacttcataaaaatcataaa 5890557  T
Q  145 tgagataattaattaattatccttcaacata 175  Q
    |||||||| |||  | |||||||||||||||    
T  5890556 tgagataaataacaatttatccttcaacata 5890526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 9774211 - 9774335
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || ||||||||||||||   |  || |||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  9774211 tgtaacaccccgttttcccgacttaaaaatttcatttaattaatcagagtattcaacat------gtaaacggaatgctacacttcataaaatcataaat 9774304  T
Q  146 gagataattaattaa-ttatccttcaacata 175  Q
     || ||||||| ||| |||||||||||||||    
T  9774305 aagttaattaactaatttatccttcaacata 9774335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 14047254 - 14047367
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataaa 144  Q
    |||||||||||||||| || || ||||||||||| ||||  ||||||||||||||||| ||||       |||||||||||||||| ||||| |||||||    
T  14047254 tgtaacaccccgttttcccaacataaaaatttcataacaattatcagagtattcaacaaataa-------cggaatgctacacttcttaaaaatcataaa 14047346  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  14047347 tgagataattaactaattatc 14047367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 18319952 - 18319839
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    |||||||||||||||| || |||||||||||||| || |  ||||||||||||||||||||       |||||||||||||||||| | ||||| |||||    
T  18319952 tgtaacaccccgttttcccaacttaaaaatttcataataattatcagagtattcaacacat-------aacggaatgctacacttcttaaaaataataaa 18319860  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  18319859 tgagataattaactaattatc 18319839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 165
Target Start/End: Complemental strand, 10776661 - 10776546
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcata 142  Q
    |||||||||||||||||| || || ||||||||||| ||||  ||||||||||||||| | ||||       |||||||||||||||| ||||| |||||    
T  10776661 tttgtaacaccccgttttcccaacataaaaatttcacaacaattatcagagtattcaataaataa-------cggaatgctacacttcttaaaaatcata 10776569  T
Q  143 aatgagataattaattaattatc 165  Q
    |||||||||||||| ||||||||    
T  10776568 aatgagataattaactaattatc 10776546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 37606704 - 37606579
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || ||||||||||||||   |  || |||||||||||||||       ||||||||||||||||||||| ||||||||||||    
T  37606704 ttgtaacaccccgttttcccgacttaaaaatttcatttaattaatcagagtattcaacat------gtaaacggaatgctacacttcttaaaatcataaa 37606611  T
Q  145 tgagataattaattaa-ttatccttcaacata 175  Q
    | || ||||||| ||| |||||||||||||||    
T  37606610 taagttaattaactaatttatccttcaacata 37606579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 108
Target Start/End: Original strand, 40724681 - 40724744
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacata-tatcagagtattcaacacataa 108  Q
    ||||||||||||||||| || |||||||||||||||||||| |||||||||| |||||||||||    
T  40724681 ttgtaacaccccgttttcccaacttaaaaatttcaaacatattatcagagtaatcaacacataa 40724744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 5912540 - 5912495
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  5912540 tatcttgtttactgtttagtgaaatagttaatttgataatgtcctt 5912495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 5919475 - 5919430
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  5919475 tatcttgtttactgtttagtgaaatagttaatttgataatgtcctt 5919430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 6749939 - 6749984
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  6749939 tatcttgtttactgtttagtgaaatagttaatttgataatgtcctt 6749984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 35418706 - 35418661
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  35418706 tatcttgtttactgtttagtgaaatagttaatttgataatgtcctt 35418661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 180
Target Start/End: Original strand, 9077130 - 9077255
Alignment:
Q  49 taacaccccgtttttcctacttaaaaatttca--aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatg 146  Q
    ||||| |||||||| || ||||||||||||||  ||||| ||||||||||  ||||| ||||       |||||||||||||||| ||||||||||||      
T  9077130 taacatcccgttttcccaacttaaaaatttcataaacatttatcagagtaaacaacatataa-------cggaatgctacacttc-taaaatcataaaac 9077221  T
Q  147 agataattaattaattatccttcaacataaatca 180  Q
    ||||||||||  ||||||| ||||||||||||||    
T  9077222 agataattaacaaattatctttcaacataaatca 9077255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 18417284 - 18417398
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttc-ataaaatcataa 143  Q
    |||||||||||||||| || |||||||||||||  |||||| ||||||||||  ||||||||       |||||||||||||||||| | || || ||||    
T  18417284 tgtaacaccccgttttcccaacttaaaaatttcataaacatttatcagagtaaacaacacat-------aacggaatgctacacttctaaaatataataa 18417376  T
Q  144 atgagataattaattaattatc 165  Q
    ||||||||||||| ||||||||    
T  18417377 atgagataattaactaattatc 18417398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 21330303 - 21330241
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||    
T  21330303 ataagtcttggcacgcaggcctcatcaaaacatctcataaattcagttaaacaacataatcat 21330241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 24066352 - 24066465
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    |||||||||||||||| || || ||||||||||| || |  ||||||||||||||||||||       |||||||||||||||||| | ||||| |||||    
T  24066352 tgtaacaccccgttttcccaacataaaaatttcataataattatcagagtattcaacacat-------aacggaatgctacacttcttaaaaataataaa 24066444  T
Q  145 tgagataattaattaattatc 165  Q
    ||||||||||||  |||||||    
T  24066445 tgagataattaacgaattatc 24066465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 23475342 - 23475406
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacg 111  Q
    ||||||||||||||||| || |||||||||||||| | ||| |||||||||||||||| |||||||    
T  23475342 ttgtaacaccccgttttcccaacttaaaaatttcacatata-atcagagtattcaacatataaacg 23475406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36101624 - 36101579
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||    
T  36101624 tatcttgtttactgtttagtgaaatagttcatttgataatgtcctt 36101579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 41096524 - 41096467
Alignment:
Q  109 acgtaaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatc 165  Q
    ||||||||||||||||||||||| | |||||| |||||||||||||||| ||||||||    
T  41096524 acgtaaacggaatgctacacttcttaaaaatcttaaatgagataattaactaattatc 41096467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 20298593 - 20298653
Alignment:
Q  112 taaacggaatgctacacttcataa-aatcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||||||| ||||||| |||||||||||  |||||||| ||||||||||||||    
T  20298593 taaacggaatgctacatttcataacaatcataaatggaataattaactaattatccttcaa 20298653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 21275641 - 21275693
Alignment:
Q  124 tacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    |||||||| ||||||||||||||||||||||||  ||||||| ||||||||||    
T  21275641 tacacttcttaaaatcataaatgagataattaacaaattatctttcaacataa 21275693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 21556333 - 21556281
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    |||||||||||||||||||| |||||||||||||| | ||| |||||||||||    
T  21556333 ttgtaacaccccgtttttccaacttaaaaatttcacatataaatcagagtatt 21556281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 23468971 - 23469034
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacg 111  Q
    |||||||||||||||| || |||||||||||||| | ||| |||||||||||||||| |||||||    
T  23468971 tgtaacaccccgttttcccaacttaaaaatttcacatata-atcagagtattcaacatataaacg 23469034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 38147315 - 38147190
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    |||||||||||||||| || ||||||||||||||   |  || |||||||||||||||       ||||||||||||||||||||||| ||||||| |||    
T  38147315 tgtaacaccccgttttcccgacttaaaaatttcatttaattaatcagagtattcaacat------gtaaacggaatgctacacttcataaaaatcacaaa 38147222  T
Q  145 tgagataattaattaattatccttcaacataa 176  Q
      ||||||||||  ||||||| ||||||||||    
T  38147221 atagataattaacaaattatctttcaacataa 38147190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 261821 - 261888
Alignment:
Q  109 acgtaaacggaatgctacacttcat-----aaaatcataaatgagataattaattaattatccttcaa 171  Q
    ||||||||||||||||||||||| |     |||||||||||||| |||||||| ||||||||||||||    
T  261821 acgtaaacggaatgctacacttcttttcctaaaatcataaatgaaataattaactaattatccttcaa 261888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 285
Target Start/End: Original strand, 21564876 - 21564953
Alignment:
Q  207 agttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    ||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||| | ||||| ||| |||||||||||||    
T  21564876 agtcttggcacgcaggcctcatcaaaacatctcataaattcagttaaacaactt-accattt-aaattcataaaacaaat 21564953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 175
Target Start/End: Original strand, 21886525 - 21886576
Alignment:
Q  124 tacacttcataaaatcataaatgagataattaattaattatccttcaacata 175  Q
    |||||||| ||||||||||||||||||||||||  ||||||| |||||||||    
T  21886525 tacacttcttaaaatcataaatgagataattaacaaattatctttcaacata 21886576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 19509766 - 19509828
Alignment:
Q  114 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  19509766 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 19509828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 21367526 - 21367464
Alignment:
Q  114 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  21367526 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 21367464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 21876760 - 21876818
Alignment:
Q  113 aaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||  |||||||| ||||||||||||||||||||||||  ||||||| |||||    
T  21876760 aaacggaatattacacttcttaaaatcataaatgagataattaacaaattatctttcaa 21876818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 26703443 - 26703501
Alignment:
Q  207 agttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 265  Q
    |||||||| ||||| |||||||||| |  ||||||||||||||||||| ||||||||||    
T  26703443 agttttggcacgcaggcctcatcaagatgtctcataaatcagttaaactacttaatcat 26703501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 26973176 - 26973234
Alignment:
Q  207 agttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 265  Q
    |||||||| ||||| |||||||||| |  ||||||||||||||||||| ||||||||||    
T  26973176 agttttggcacgcaggcctcatcaagatgtctcataaatcagttaaactacttaatcat 26973234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 37723103 - 37723153
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  37723103 tgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagta 37723153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38485093 - 38485138
Alignment:
Q  1 tatcttgtttactatttagtgaaatagttaatttgataatgtcctt 46  Q
    |||||| |||||| ||||||||||||||||||||||||| ||||||    
T  38485093 tatcttatttactgtttagtgaaatagttaatttgataaagtcctt 38485138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 13024507 - 13024558
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagta 96  Q
    ||||||||||||||||||| |||||||||||||  |||||| ||||||||||    
T  13024507 tgtaacaccccgtttttccaacttaaaaatttcataaacatttatcagagta 13024558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 13094691 - 13094742
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagta 96  Q
    ||||||||||||||||||| |||||||||||||  |||||| ||||||||||    
T  13094691 tgtaacaccccgtttttccaacttaaaaatttcataaacatttatcagagta 13094742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 21293900 - 21293849
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    ||||||||| ||||||| || ||||||||||||||||||||| |||||||||    
T  21293900 ttgtaacactccgttttcccaacttaaaaatttcaaacatataatcagagta 21293849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 21872491 - 21872538
Alignment:
Q  124 tacacttcataaaatcataaatgagataattaattaattatccttcaa 171  Q
    |||||||| ||||||||||||||||||||||||  ||||||| |||||    
T  21872491 tacacttcttaaaatcataaatgagataattaacaaattatctttcaa 21872538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 24492743 - 24492782
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttcaaaca 84  Q
    |||||||||||||||||| || ||||||||||||||||||    
T  24492743 tttgtaacaccccgttttcccaacttaaaaatttcaaaca 24492782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 8287697 - 8287647
Alignment:
Q  125 acacttcataaaatcataaatgagataattaattaattatccttcaacata 175  Q
    ||||||| |||||||||| |||||||||||||  ||||||| |||||||||    
T  8287697 acacttcttaaaatcatatatgagataattaacaaattatctttcaacata 8287647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 19661768 - 19661718
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    ||||||||||| |||| || ||||||||||||||||||||| |||||||||    
T  19661768 tgtaacaccccattttcccaacttaaaaatttcaaacatataatcagagta 19661718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 22074212 - 22074274
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataa 108  Q
    |||||||||||||||| || || ||||||||||| || | |||||||||||||| ||||||||    
T  22074212 tgtaacaccccgttttcccaacataaaaatttcataataaatatcagagtattcgacacataa 22074274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 146
Target Start/End: Complemental strand, 22179147 - 22179052
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    ||||||| |||||||| || |  ||||||||||| ||||  |||||||||||||||||||||      |||||||||||||||||| | |||||||||||    
T  22179147 tgtaacatcccgttttcccaatataaaaatttcataacaactatcagagtattcaacacata------aacggaatgctacacttcttaaaaatcataaa 22179054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 24211792 - 24211850
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttc 169  Q
    ||||||||||||||||||||  |||| |||||||||  |||||||| ||||||||||||    
T  24211792 taaacggaatgctacacttctcaaaaatcataaatggaataattaactaattatccttc 24211850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 25430662 - 25430708
Alignment:
Q  134 aaaatcataaatgagataattaattaattatccttcaacataaatca 180  Q
    |||||||||||  | |||||||||||||||||||||| |||||||||    
T  25430662 aaaatcataaaacatataattaattaattatccttcatcataaatca 25430708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 36155586 - 36155474
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataaa 144  Q
    |||||||||||||||| || || ||||||||||  ||||  ||||||| ||||||||||||||       | |||||||||||||  ||||| |||||||    
T  36155586 tgtaacaccccgtttt-ccaacataaaaatttcgtaacaattatcagaatattcaacacataa-------cagaatgctacactttttaaaaatcataaa 36155495  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  36155494 tgagataattaactaattatc 36155474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 145
Target Start/End: Original strand, 42958871 - 42958905
Alignment:
Q  111 gtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||||||||||||||||||||| |||||||||    
T  42958871 gtaaacggaatgctacacttcataatatcataaat 42958905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 21407598 - 21407545
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    |||||||||||||||||| || |||||||||||||| | ||| |||| ||||||    
T  21407598 tttgtaacaccccgttttcccaacttaaaaatttcacatataaatcaaagtatt 21407545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 21503082 - 21503029
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatc 165  Q
    ||||| ||||| |||||||| ||||||| |||| ||||||||||| ||||||||    
T  21503082 taaactgaatgttacacttcttaaaatcttaaaagagataattaactaattatc 21503029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 21558996 - 21558943
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    |||||||||||||||||| || |||| ||||||||| | ||| |||||||||||    
T  21558996 tttgtaacaccccgttttcccaacttgaaaatttcacatataaatcagagtatt 21558943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 23203816 - 23203763
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    |||||||||||||||||| || |||| ||||||||| | ||| |||||||||||    
T  23203816 tttgtaacaccccgttttcccaacttgaaaatttcacatataaatcagagtatt 23203763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 33897131 - 33897078
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    |||||||||||| ||||| || |||||||||||||| | ||| |||||||||||    
T  33897131 tttgtaacaccctgttttcccaacttaaaaatttcacatataaatcagagtatt 33897078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 21296151 - 21296100
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagta 96  Q
    ||||||||||||||||||| || ||||||||||  |||||| ||||||||||    
T  21296151 tgtaacaccccgtttttccaacataaaaatttcttaaacatttatcagagta 21296100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 21998474 - 21998423
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagta 96  Q
    |||||||||||||||| || |||||||||||||  |||||| ||||||||||    
T  21998474 tgtaacaccccgttttcccaacttaaaaatttcataaacatttatcagagta 21998423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 180
Target Start/End: Original strand, 4804 - 4932
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| ||  ||||||||||||||||||||| | ||||||||||||||||||        ||||||||||||||||||||||||||||    
T  4804 ttgtaacaccccgttttcccagcttaaaaatttcaaacatataatgagagtattcaacacataat-------ggaatgctacacttcataaaatcataaa 4896  T
Q  145 tgagataattaattaattatccttcaacataaatca 180  Q
     ||||||||||| |||||||||||| ||||||||||    
T  4897 cgagataattaactaattatccttcgacataaatca 4932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 278
Target Start/End: Original strand, 4976 - 5043
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataa 278  Q
    |||| ||||| ||||||||||||||||| || |||||||| |||||||||||||||| ||| ||||||    
T  4976 ttggcacgcaggcctcatcaaaacatctgatcaatcagttcaacaacttaatcatttaaaattcataa 5043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 180
Target Start/End: Original strand, 45051 - 45179
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || |||||||| |||||||||||| ||||||||||||||||||       || ||||||||||||||||  ||| |||||||    
T  45051 ttgtaacaccccgttttcccaacttaaaactttcaaacatattatcagagtattcaacaca-------aagcggaatgctacacttctaaaagtcataaa 45143  T
Q  145 tgagataattaattaattatccttcaacataaatca 180  Q
    |||||||||||| |||||||||||||||||||||||    
T  45144 tgagataattaactaattatccttcaacataaatca 45179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 66; Significance: 3e-29; HSPs: 4)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 11034 - 11163
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca--aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    |||||||||||||||| || || |||||||||||  || || ||||||||||||||||||||||||       |||||||||||||||||||||||||||    
T  11034 tgtaacaccccgttttcccaacataaaaatttcataaaaatttatcagagtattcaacacataaaca------gaatgctacacttcataaaatcataaa 11127  T
Q  145 tgagataattaattaattatccttcaacataaatca 180  Q
    |||||||||||| ||||||||| ||||||| |||||    
T  11128 tgagataattaactaattatccctcaacatgaatca 11163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 2023 - 1898
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaa-catatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || || |||   ||||||| ||| |||||||||| ||||||||||||||      ||||||||||||||  || |||||||||    
T  2023 tgtaacaccccgttttcccaacataattgtttcaaaacatttatcagagtagtcaacacataaacg------gaatgctacacttctaaatatcataaat 1930  T
Q  146 gagataattaattaattatccttcaacataaa 177  Q
    ||||||||||| ||||||||||||||||||||    
T  1929 gagataattaactaattatccttcaacataaa 1898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 1845 - 1783
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||    
T  1845 ataagtcttggcacgcaggcctcatcaaaacatctcataaattcagttaaacaacataatcat 1783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 265
Target Start/End: Original strand, 11231 - 11275
Alignment:
Q  222 gcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  11231 gcctcatcaaaacatctcataaattcagttaaacaacataatcat 11275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 64; Significance: 5e-28; HSPs: 4)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 46 - 180
Target Start/End: Original strand, 1270 - 1400
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataa--aatcata 142  Q
    ||||||||||||||||| || |||||| |||||||||||||| ||||||||||| ||||||||||||      |||||||||||||| |||  | |||||    
T  1270 ttgtaacaccccgttttcccaacttaataatttcaaacatattatcagagtatttaacacataaacg------gaatgctacacttc-taactagtcata 1362  T
Q  143 aatgagataattaattaattatccttcaacataaatca 180  Q
    |||||||||||||| |||||||||||||||||||||||    
T  1363 aatgagataattaactaattatccttcaacataaatca 1400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 46 - 180
Target Start/End: Original strand, 5687 - 5817
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataa--aatcata 142  Q
    ||||||||||||||||| || |||||| |||||||||||||| ||||||||||| ||||||||||||      |||||||||||||| |||  | |||||    
T  5687 ttgtaacaccccgttttcccaacttaataatttcaaacatattatcagagtatttaacacataaacg------gaatgctacacttc-taactagtcata 5779  T
Q  143 aatgagataattaattaattatccttcaacataaatca 180  Q
    |||||||||||||| |||||||||||||||||||||||    
T  5780 aatgagataattaactaattatccttcaacataaatca 5817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 282
Target Start/End: Original strand, 1444 - 1516
Alignment:
Q  211 ttggtacgcatgcctcatcaaaac-atctcataaatcagttaaacaacttaatcatttcaaactcataaaaca 282  Q
    |||| ||||| ||||||||||||  |||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  1444 ttggcacgcaggcctcatcaaaaatatctcataaatcagttcaacaacttaatcatttaaaattcataaaaca 1516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 282
Target Start/End: Original strand, 5861 - 5933
Alignment:
Q  211 ttggtacgcatgcctcatcaaaac-atctcataaatcagttaaacaacttaatcatttcaaactcataaaaca 282  Q
    |||| ||||| ||||||||||||  |||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  5861 ttggcacgcaggcctcatcaaaaatatctcataaatcagttcaacaacttaatcatttaaaattcataaaaca 5933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 5e-28; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 49 - 197
Target Start/End: Complemental strand, 22135131 - 22134988
Alignment:
Q  49 taacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatga 147  Q
    |||||||||||||| || |||||||||||||||||||||| |||||||| ||| ||||||||||      |||||||||||||| ||||||| ||||  |    
T  22135131 taacaccccgttttcccaacttaaaaatttcaaacatataatcagagtaatcatcacataaacg------gaatgctacacttc-taaaatcgtaaacaa 22135039  T
Q  148 gataattaattaattatccttcaacataaatc-aattccaagacattgcag 197  Q
    ||||||||| ||||||||||||||||||| || |||||||| |||||||||    
T  22135038 gataattaactaattatccttcaacataattcaaattccaaaacattgcag 22134988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 28405165 - 28405292
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||| | |||||||| |||||||||||| ||||||||| |||||||| ||||||||||||||      |||||||||||||| ||||||| ||||     
T  28405165 tgtaacactctgtttttccaacttaaaaattttaaacatataatcagagtaatcaacacataaacg------gaatgctacacttc-taaaatcgtaaac 28405257  T
Q  146 gagataattaattaattatccttcaacataaatca 180  Q
    ||||||||||| |||||||||||||||||||||||    
T  28405258 gagataattaactaattatccttcaacataaatca 28405292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 169
Target Start/End: Original strand, 19819835 - 19819951
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || ||||||||||||||||||||| |||| ||||||||||||||       |||||||||||||| ||||||||||||| ||     
T  19819835 tgtaacaccccgttttcccaacttaaaaatttcaaacatataatcacagtattcaacacat-------aacggaatgctacatttcataaaatcattaac 19819927  T
Q  146 gagataattaattaattatccttc 169  Q
    ||||||||||| ||||||||||||    
T  19819928 gagataattaactaattatccttc 19819951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 22414106 - 22413982
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || || ||||||||| | ||||||||||||||||||||||||||||| |      |||||||||||||| |||||||||||||    
T  22414106 tgtaacaccccgttttcccaacataaaaatttaataacatatatcagagtattcaacacataaatg------gaatgctacacttcttaaaatcataaat 22414013  T
Q  146 gagataattaattaattatccttcaacataa 176  Q
    ||||||| |||  | ||||||||||||||||    
T  22414012 gagataaataaaaatttatccttcaacataa 22413982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 43136457 - 43136570
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    |||||||||||||||| || |||||||||||||| |||| |||||||||||||||||||||       |||||||||||||||||| | |||||||||||    
T  43136457 tgtaacaccccgttttcccaacttaaaaatttcataacaaatatcagagtattcaacacat-------aacggaatgctacacttcttaaaaatcataaa 43136549  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  43136550 tgagataattaactaattatc 43136570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 47 - 181
Target Start/End: Original strand, 19795270 - 19795399
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaa-catatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || || ||||||||||||| ||| |||||||||| ||||||       ||||||| ||||||| ||| |  ||||||||||||    
T  19795270 tgtaacaccccgttttcccaacataaaaatttcaaaacatttatcagagtaatcaacaa------gtaaacgaaatgctatactactaaaaatcataaat 19795363  T
Q  146 gagataattaattaattatccttcaacataaatcaa 181  Q
    ||||||||||| ||||||||||||||||||||||||    
T  19795364 gagataattaactaattatccttcaacataaatcaa 19795399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 47 - 197
Target Start/End: Complemental strand, 24689264 - 24689120
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaa-catatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||| ||||| || || ||||||||||||| ||||||||||  |||||||||||||||||      |||||||| ||||| |||||||||||||    
T  24689264 tgtaacaccctgttttcccaacataaaaatttcaaaacatatatcaggatattcaacacataaacg------gaatgctaaacttcttaaaatcataaat 24689171  T
Q  146 gagataattaattaattatccttcaacataaatcaattccaagacattgcag 197  Q
    |||||||||||  ||||||| |||||||| ||| |||||||| || ||||||    
T  24689170 gagataattaacaaattatctttcaacat-aattaattccaaaactttgcag 24689120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 46 - 167
Target Start/End: Complemental strand, 23713864 - 23713748
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||| ||||||| || || ||||||||||| ||||| |||||||||| ||||||||||||||      ||||||||||||||  |||||||||||    
T  23713864 ttgtaacacgccgttttcccaacataaaaatttcataacatttatcagagtaatcaacacataaacg------gaatgctacacttctaaaaatcataaa 23713771  T
Q  145 tgagataattaattaattatcct 167  Q
    |||||||||||| ||||||||||    
T  23713770 tgagataattaactaattatcct 23713748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 175
Target Start/End: Complemental strand, 8695 - 8572
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || || ||||||||||| ||||| ||| |||||| ||||||||||||||      |||||||||||||| |||||||||||||    
T  8695 tgtaacaccccgttttcccaacataaaaatttcataacatttattagagtaatcaacacataaacg------gaatgctacacttcttaaaatcataaat 8602  T
Q  146 gagataattaattaattatccttcaacata 175  Q
    ||||||| |||  | |||||||||||||||    
T  8601 gagataaataacaatttatccttcaacata 8572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 7678754 - 7678878
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaa-catatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || | |||||||||||||| ||| ||||||||||  |||||||||||      ||||||||||||||||||||||| || |||    
T  7678754 tgtaacaccccgttttcccaatttaaaaatttcaaaacatttatcagagtaaacaacacataaa------cggaatgctacacttcataaaattat-aat 7678846  T
Q  146 gagataattaattaattatccttcaacataaa 177  Q
     | |||||||| ||||||||||||||||||||    
T  7678847 caaataattaactaattatccttcaacataaa 7678878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 20259407 - 20259532
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    |||||||||||||||||||| ||||||||||||||   |  || |||||||||||||||       |||||||||||||||||||| |||||||||||||    
T  20259407 ttgtaacaccccgtttttccgacttaaaaatttcatttaattaatcagagtattcaacat------gtaaacggaatgctacactttataaaatcataaa 20259500  T
Q  145 tgagataattaattaa-ttatccttcaacata 175  Q
    | || ||||||| ||| |||||||||||||||    
T  20259501 taagttaattaactaatttatccttcaacata 20259532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 23866777 - 23866901
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaaca-tatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || ||||||||||||||   | || ||||||||||||||||       ||||||||||||||||||||||||| |||||||||    
T  23866777 tgtaacaccccgttttcccgacttaaaaatttcatttaataaatcagagtattcaacat------gtaaacggaatgctacacttcataatatcataaat 23866870  T
Q  146 gagataattaattaa-ttatccttcaacata 175  Q
     || ||||||| ||| |||||||||||||||    
T  23866871 aagttaattaactaatttatccttcaacata 23866901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 10687115 - 10687050
Alignment:
Q  111 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 175  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  10687115 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 10687050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 20521109 - 20520984
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataaa 144  Q
    |||||||||||||||| || |  ||||||||||| ||||  |||||||||||||||||||||||||      |||||||||||||| ||||| |||||||    
T  20521109 tgtaacaccccgttttcccaaaataaaaatttcataacaattatcagagtattcaacacataaacg------gaatgctacacttcttaaaaatcataaa 20521016  T
Q  145 tgagataattaattaattatccttcaacataa 176  Q
    |||||||| |||  | |||||| |||||||||    
T  20521015 tgagataaataacaatttatccatcaacataa 20520984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 176
Target Start/End: Original strand, 8905887 - 8906011
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaat 145  Q
    |||||||||||||||| || || ||||||||   ||||  ||| |||||||||||||||||||||      |||||||||||||| | ||||||||||||    
T  8905887 tgtaacaccccgttttcccaacataaaaattcataacaattattagagtattcaacacataaacg------gaatgctacacttctttaaaatcataaat 8905980  T
Q  146 gagataattaattaattatccttcaacataa 176  Q
    ||||||| |||  | ||||||||||||||||    
T  8905981 gagataaataacaatttatccttcaacataa 8906011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 20616492 - 20616616
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaaca-tatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || ||||||||||||||   | || ||||||||||||||||       ||||||||||||||||||||||||| |||||||||    
T  20616492 tgtaacaccccgttttcccgacttaaaaatttcatttaataaatcagagtattcaacat------gtaaacggaatgctacacttcataatatcataaat 20616585  T
Q  146 gagataattaattaa-ttatccttcaacata 175  Q
     |  ||||||| ||| |||||||||||||||    
T  20616586 aaattaattaactaatttatccttcaacata 20616616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 285
Target Start/End: Original strand, 7678931 - 7679012
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    |||||| |||| ||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| ||| ||||||| |||||    
T  7678931 ataagtcttggcacgcaggcctcatcaaaacatttcataaattcagttaaacaacttaatcattt-aaattcataaatcaaat 7679012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 23059863 - 23059937
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||| | | |||| ||||||||    
T  23059863 ttggcacgcaggcctcatccaaacatctcataaatcagttaaacaactttatcatttaatattcatgaaacaaat 23059937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 18787705 - 18787580
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataaa 144  Q
    ||||||||||| ||||  | |||||||||||||| ||||  |||||||||| ||||||||||||||      |||||||||||||| ||||| || ||||    
T  18787705 tgtaacaccccattttctcaacttaaaaatttcataacaattatcagagtaatcaacacataaacg------gaatgctacacttcttaaaaatcttaaa 18787612  T
Q  145 tgagataattaattaattatccttcaacataa 176  Q
    |||||||| |||  | ||||||||||||||||    
T  18787611 tgagataaataacaatttatccttcaacataa 18787580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 285
Target Start/End: Complemental strand, 24689097 - 24689016
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    |||||| |||| ||||| ||||||||||||||||||||||| |||||||||| ||||||||| || ||| ||||||| |||||    
T  24689097 ataagtcttggcacgcaggcctcatcaaaacatctcataaattcagttaaacgacttaatcaatt-aaaatcataaatcaaat 24689016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 29594139 - 29594196
Alignment:
Q  109 acgtaaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatc 165  Q
    ||||||||||||||||||||||| | |||||| |||||||||||||||| ||||||||    
T  29594139 acgtaaacggaatgctacacttcttaaaaatcttaaatgagataattaactaattatc 29594196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 25106080 - 25106148
Alignment:
Q  44 ctttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacg 111  Q
    ||||||||||||||||||| || || ||||||||||| ||||  ||||||||| |||||||||||||||    
T  25106080 ctttgtaacaccccgttttcccaacataaaaatttcataacaattatcagagtgttcaacacataaacg 25106148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 8530 - 8468
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaa--tcagttaaacaacttaatca 264  Q
    |||||| |||| ||| | |||||||||||||||||||||||  ||||||||||||||||||||    
T  8530 ataagtgttggcacgtaggcctcatcaaaacatctcataaaattcagttaaacaacttaatca 8468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 23066231 - 23066274
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatat 89  Q
    ||||||||||||||||| || |||||||||||||||||||||||    
T  23066231 ttgtaacaccccgttttcccaacttaaaaatttcaaacatatat 23066274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 23075681 - 23075724
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatat 89  Q
    ||||||||||||||||| || |||||||||||||||||||||||    
T  23075681 ttgtaacaccccgttttcccaacttaaaaatttcaaacatatat 23075724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 108
Target Start/End: Complemental strand, 23104318 - 23104255
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataa 108  Q
    |||||||||||| |||| || ||||||||||||||||||||| |||||||||| ||||| ||||    
T  23104318 ttgtaacacccccttttcccaacttaaaaatttcaaacatataatcagagtatacaacatataa 23104255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 6481042 - 6481104
Alignment:
Q  114 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  6481042 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 6481104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 6484509 - 6484571
Alignment:
Q  114 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  6484509 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 6484571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 20634739 - 20634681
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttc 169  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||| ||||||||||||    
T  20634739 taaacggaatgctacacttcttaaaaatcataaatggaataattaactaattatccttc 20634681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 23110891 - 23110829
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataa 108  Q
    |||||||||||||||| || || |||||||||||||||||| |||||||||| ||||| ||||    
T  23110891 tgtaacaccccgttttcccaacataaaaatttcaaacatataatcagagtatacaacatataa 23110829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 176
Target Start/End: Original strand, 23790420 - 23790548
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaa----catatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcat 141  Q
    |||||||||||||||| || || |||||||||||||    ||  |||||||||||||||||||      |||||| ||||||||||||| | ||||||||    
T  23790420 tgtaacaccccgttttcccaacataaaaatttcaaaacaacaattatcagagtattcaacaca------taaacgaaatgctacacttcttaaaaatcat 23790513  T
Q  142 aaatgagataattaattaattatccttcaacataa 176  Q
    |||||  |||| |||  | ||||||||||||||||    
T  23790514 aaatggaataaataacaatttatccttcaacataa 23790548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 24316809 - 24316751
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttc 169  Q
    ||||| |||||||||||||| ||||| |||||||||  |||||||||||||||||||||    
T  24316809 taaacagaatgctacacttcttaaaaatcataaatggaataattaattaattatccttc 24316751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 23030715 - 23030756
Alignment:
Q  222 gcctcatcaaaacatctcataaatcagttaaacaacttaatc 263  Q
    |||||||||| ||||||| |||||||||||||||||||||||    
T  23030715 gcctcatcaagacatctcgtaaatcagttaaacaacttaatc 23030756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 24085978 - 24085930
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagta 96  Q
    |||||||||||||||| || ||||||||||||||||||| ||||||||||    
T  24085978 tgtaacaccccgttttcccaacttaaaaatttcaaacat-tatcagagta 24085930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 30647750 - 30647689
Alignment:
Q  115 acggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 175  Q
    ||||||||||||||||  ||||||||||||| || ||||||| ||| |||||||||||||||    
T  30647750 acggaatgctacactttttaaaatcataaataagttaattaactaatttatccttcaacata 30647689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 357051 - 357103
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    ||||||||||||||||| || |||||||||||||| | ||| |||||||||||    
T  357051 ttgtaacaccccgttttcccaacttaaaaatttcacatataaatcagagtatt 357103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 19795452 - 19795519
Alignment:
Q  216 acgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||| ||||   ||| |||||||||||||    
T  19795452 acgcaggcctaatcaaaacatctcataaattcagttaaacaacttattcat---aaaatcataaaacaaat 19795519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 27471567 - 27471627
Alignment:
Q  112 taaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||||||||||| | |||||||||||||  |||||||| ||||| ||||||||    
T  27471567 taaacggaatgctacacttcttaaaaatcataaatggaataattaactaattttccttcaa 27471627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 19203231 - 19203172
Alignment:
Q  113 aaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 171  Q
    ||||||||||  ||||||||||||| |||||||||  |||||||||||||| ||||||||    
T  19203231 aaacggaatgtcacacttcataaaaatcataaatggaataattaattaattttccttcaa 19203172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 23059700 - 23059743
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatat 89  Q
    ||||||||||||||||| || |||||||||||||||| ||||||    
T  23059700 ttgtaacaccccgttttcccaacttaaaaatttcaaatatatat 23059743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 23066409 - 23066468
Alignment:
Q  226 catcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    |||| |||||||||| |||||||||||||||||| ||||||| | | |||| ||||||||    
T  23066409 catccaaacatctcaaaaatcagttaaacaactttatcatttaatattcatgaaacaaat 23066468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 23075859 - 23075918
Alignment:
Q  226 catcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    |||| |||||||||| |||||||||||||||||| ||||||| | | |||| ||||||||    
T  23075859 catccaaacatctcaaaaatcagttaaacaactttatcatttaatattcatgaaacaaat 23075918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 24704094 - 24704043
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    ||||||||||||||||| || || |||||||||||||||||| |||||||||    
T  24704094 ttgtaacaccccgttttcccaacataaaaatttcaaacatataatcagagta 24704043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 21918374 - 21918412
Alignment:
Q  133 taaaatcataaatgagataattaattaattatccttcaa 171  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  21918374 taaaatcataaatgaaataattaactaattatccttcaa 21918412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 22732288 - 22732238
Alignment:
Q  125 acacttcataaaatcataaatgagataattaattaattatccttcaacata 175  Q
    ||||||| ||||||||||||||||||||||||  ||||||| || ||||||    
T  22732288 acacttcttaaaatcataaatgagataattaacaaattatcttttaacata 22732238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 22738998 - 22738948
Alignment:
Q  125 acacttcataaaatcataaatgagataattaattaattatccttcaacata 175  Q
    ||||||| ||||||||||||||| ||||||||  ||||||| |||||||||    
T  22738998 acacttcttaaaatcataaatgaaataattaacaaattatctttcaacata 22738948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 24717433 - 24717383
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    |||||||||||||||| || || |||||||||||||||||| |||||||||    
T  24717433 tgtaacaccccgttttcccaacataaaaatttcaaacatataatcagagta 24717383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 24947065 - 24947181
Alignment:
Q  49 taacaccccgtttttcctacttaaaaatttcaaacatat--atcagagtattcaacacataaacgtaaacggaatgctacacttcataaa-atcataaat 145  Q
    |||||||||||||| || |||||||||||||| | ||||  |||||||||  ||||| ||||       ||||||||||||||||  ||| || ||||||    
T  24947065 taacaccccgttttcccaacttaaaaatttcataaatatttatcagagtaaacaacatataa-------cggaatgctacacttctaaaatataataaat 24947157  T
Q  146 gagataattaattaattatccttc 169  Q
    ||||||||||| |||| |||||||    
T  24947158 gagataattaactaatcatccttc 24947181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 299776 - 299719
Alignment:
Q  44 ctttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattca 100  Q
    ||||||||||||||||||| || |||||||||||||| | | || |||||||||||||    
T  299776 ctttgtaacaccccgttttcccaacttaaaaatttcataaaaataatcagagtattca 299719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 22800016 - 22799955
Alignment:
Q  114 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacata 175  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| | |||||||    
T  22800016 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatcttccaacata 22799955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 21178283 - 21178227
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattca 100  Q
    ||||||||||||||||||||| || ||||||||||| | | || |||||||||||||    
T  21178283 tttgtaacaccccgtttttccaacataaaaatttcataaaaataatcagagtattca 21178227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 22134947 - 22134903
Alignment:
Q  222 gcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||||||||||| |||||||||| |||||||||||||||| ||||    
T  22134947 gcctcatcaaaatatctcataaattcagttaaacaacttattcat 22134903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 24669901 - 24669953
Alignment:
Q  120 atgctacacttcataa-aatcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||| ||| |||||||||||  |||||||| ||||||||||||||    
T  24669901 atgctacacttcttaagaatcataaatggaataattaactaattatccttcaa 24669953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 24680350 - 24680402
Alignment:
Q  120 atgctacacttcataa-aatcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||| ||| |||||||||||  |||||||| ||||||||||||||    
T  24680350 atgctacacttcttaagaatcataaatggaataattaactaattatccttcaa 24680402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 24816418 - 24816366
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    ||||||||||||||||| || |||||||||||||| | | | |||||||||||    
T  24816418 ttgtaacaccccgttttcccaacttaaaaatttcacataaaaatcagagtatt 24816366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 45031123 - 45031063
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacac 104  Q
    |||||||||||||| ||| || || ||||||||||| ||||  ||||||||||||||||||    
T  45031123 tttgtaacaccccgctttcccaacataaaaatttcataacaattatcagagtattcaacac 45031063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 159857 - 159999
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatc-agagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||| ||||| || |||||||||||||||||||||| | |||||||||| || |||||||      ||||| ||||||||| ||||||||||||    
T  159857 tgtaacaccctgttttcccaacttaaaaatttcaaacatataaccagagtattcatcatataaacg------gaatgttacacttca-aaaatcataaat 159949  T
Q  146 gagataattaattaattatccttcaacataaatca-attccaagacattg 194  Q
     |||||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  159950 aagataattaactaattatccttcaacataaatcacattccaaaacattg 159999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 46 - 169
Target Start/End: Complemental strand, 164190 - 164072
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || |||||||||||||| || ||||||||||||| ||||||||      | |||||||||||||||||| |||| |||||||    
T  164190 ttgtaacaccccgttttcccaacttaaaaatttcataagatatatcagagtagtcaacaca------tgaacggaatgctacacttcttaaactcataaa 164097  T
Q  145 tgagataattaattaattatccttc 169  Q
    |   |||||||| ||||||| ||||    
T  164096 tagaataattaaataattattcttc 164072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 198159 - 198220
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcataaa--tcagttaaacaacttaatcat 265  Q
    |||| |||| ||||| |||||||||||||||||||||||  ||||| ||||| |||||||||    
T  198159 aagtcttggcacgcaggcctcatcaaaacatctcataaaattcagtcaaacatcttaatcat 198220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 197
Target Start/End: Original strand, 10069 - 10214
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||| ||||| || |||||||||||||||||||||| |||||||||||| || |||||||      ||||||||||||||| ||||||||||||    
T  10069 tgtaacaccctgttttcccaacttaaaaatttcaaacatataatcagagtattcatcatataaacg------gaatgctacacttca-aaaatcataaat 10161  T
Q  146 gagataattaattaattatccttcaacataaatc-aattccaagacattgcag 197  Q
     |||||||||| ||||||||||||||| |||| | ||||| || |||||||||    
T  10162 aagataattaactaattatccttcaacgtaaaacaaattctaaaacattgcag 10214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 6699 - 6764
Alignment:
Q  46 ttgtaacaccccgttttt-cctacttaaaaatttcaaacatatatcagagtattcaacacataaacg 111  Q
    |||||||||||||||||| || || ||||||||||| | ||| |||||||||||| |||||||||||    
T  6699 ttgtaacaccccgttttttccaacataaaaatttcacatata-atcagagtattcgacacataaacg 6764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 10977 - 10849
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaa-catatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || ||  |||||||||||| ||| |||||||||| |||||||||||||       ||||||||||||||  ||||||||||||    
T  10977 tgtaacaccccgttttcccaacacaaaaatttcaaaacatttatcagagtaatcaacacataaaca------gaatgctacacttctaaaaatcataaat 10884  T
Q  146 gagataattaattaattatccttcaacataaatca 180  Q
    ||||||||||| |||||||||||| ||||||||||    
T  10883 gagataattaactaattatccttcgacataaatca 10849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 10799 - 10737
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||    
T  10799 ataagtcttggcacgcaggcctcatcaaaacatctcataaattcagttaaacaacataatcat 10737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 9123 - 9174
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    |||||||||||||||| || |||||||||||||| | ||| |||||||||||    
T  9123 tgtaacaccccgttttcccaacttaaaaatttcacatataaatcagagtatt 9174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 24839 - 24711
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || |  |||||||||||||||||| || |||||| ||| ||||||||||      ||||||||||||||  ||| ||||||||    
T  24839 tgtaacaccccgttttcccaatataaaaatttcaaacatattattagagtaatcatcacataaacg------gaatgctacacttctaaaactcataaat 24746  T
Q  146 gagataattaattaattatccttcaacataaatca 180  Q
    ||||||||||| |||||||||||||||||||||||    
T  24745 gagataattaactaattatccttcaacataaatca 24711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 24673 - 24611
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||||| |||| ||| | |||| |||||||||||||||||| |||||||||||||||||||||    
T  24673 ataagtcttggcacgtaggccttatcaaaacatctcataaattcagttaaacaacttaatcat 24611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 265
Target Start/End: Original strand, 17014 - 17070
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaa-tcagtt-aaacaacttaatcat 265  Q
    |||| ||||| |||||||||||||| |||||||| |||||| |||||||||||||||    
T  17014 ttggcacgcaggcctcatcaaaacacctcataaattcagttcaaacaacttaatcat 17070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 54522 - 54398
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || || ||||||||||| ||||| |||||||||| ||||||||||||||      |||||||||||||| ||||||||||||    
T  54522 ttgtaacaccccgttttcccaacataaaaatttcataacatttatcagagtaatcaacacataaacg------gaatgctacacttcttaaaatcataaa 54429  T
Q  145 tgagataattaattaattatccttcaacata 175  Q
    |||||||| |||  | |||||||||||||||    
T  54428 tgagataaataacaatttatccttcaacata 54398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 54356 - 54294
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaa--tcagttaaacaacttaatca 264  Q
    |||||| |||| ||| | |||||||||||||||||||||||  ||||||||||||||||||||    
T  54356 ataagtcttggcacgtaggcctcatcaaaacatctcataaagttcagttaaacaacttaatca 54294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 137355 - 137231
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||||||||||||||| || ||||||||||| ||||| ||||| |||||||||||||      |||||||||||||||||||| |||||||||||||    
T  137355 tgtaacaccccgtttttccaacataaaaatttcataacatttatcatagtattcaacaca------taaacggaatgctacacttcttaaaatcataaat 137262  T
Q  146 gagataattaattaattatccttcaacataa 176  Q
    ||||||| |||  | ||||| ||||||||||    
T  137261 gagataaataacaatttatctttcaacataa 137231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 173964 - 174026
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataa 108  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||||||| ||||| ||||    
T  173964 tgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagtatacaacatataa 174026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 121004 - 121055
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagta 96  Q
    |||||||||||||||| || |||||||||||||  |||||| ||||||||||    
T  121004 tgtaacaccccgttttcccaacttaaaaatttcataaacatttatcagagta 121055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 176
Target Start/End: Original strand, 125968 - 126092
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || || ||||||||||| ||||| |||||||||||||||||||      |||||||||||||||||||| |||||||||||||    
T  125968 tgtaacaccccgttttcccaacataaaaatttcataacatttatcagagtattcaacaca------taaacggaatgctacacttcttaaaatcataaat 126061  T
Q  146 gagataattaattaattatccttcaacataa 176  Q
    ||||||| |||  | ||||| ||||||||||    
T  126062 gagataaataacaatttatctttcaacataa 126092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 176
Target Start/End: Original strand, 76882 - 77007
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtatt-caacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||||| || ||||||||||| || |  ||||| |||||| ||||||||||||| ||      ||||||||||| ||||||||||||    
T  76882 tgtaacaccccgtttttccaacataaaaatttcataataattatcaaagtatttcaacacataaacgaaa------tgctacacttcttaaaatcataaa 76975  T
Q  145 tgagataattaattaattatccttcaacataa 176  Q
    |||||||| |||  | ||||| ||||||||||    
T  76976 tgagataaataacaatttatctttcaacataa 77007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 23195 - 23308
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    |||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||       ||||||||||||||||||| | |||||||||||    
T  23195 tgtaacaccccgttttcccaacttaaaaatttcataacaaatatcagagtattcaacaca-------aaacggaatgctacacttcttaaaaatcataaa 23287  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  23288 tgagataattaactaattatc 23308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 7511 - 7633
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatg 146  Q
    |||||||||||||||| || ||||||||||||  ||||| |||||||||||||||||||      |||||||||||||||||||| | ||||||||||||    
T  7511 tgtaacaccccgttttcccaacttaaaaatttataacatttatcagagtattcaacaca------taaacggaatgctacacttcttgaaatcataaatg 7604  T
Q  147 agataattaattaattatccttcaacata 175  Q
    |||||| |||  | ||||| |||||||||    
T  7605 agataaataacaatttatctttcaacata 7633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 110
Target Start/End: Complemental strand, 17028 - 16963
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaac 110  Q
    ||||||||||||||||| || || ||||||||||| ||||| |||||||||| |||||||||||||    
T  17028 ttgtaacaccccgttttcccgacataaaaatttcataacatttatcagagtaatcaacacataaac 16963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 197
Target Start/End: Complemental strand, 29696 - 29571
Alignment:
Q  67 acttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatgagataattaattaattatc 165  Q
    |||||||||||||||||||||| |||||||||||| || |||||||      ||||||||||||||| |||||||||||| |||||||||| ||||||||    
T  29696 acttaaaaatttcaaacatataatcagagtattcatcatataaacg------gaatgctacacttca-aaaatcataaataagataattaactaattatc 29604  T
Q  166 cttcaacataaatc-aattccaagacattgcag 197  Q
     |||||| |||||| |||||||| |||||||||    
T  29603 tttcaacgtaaatcaaattccaaaacattgcag 29571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 31577 - 31691
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttc-aaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || ||||||||||||| |||||| |||||||||| ||||||||      |||||| |||||||||||||  |||||||||||    
T  31577 ttgtaacaccccgttttcccaacttaaaaatttcaaaacatttatcagagtaatcaacaca------taaacgaaatgctacacttctaaaaatcataaa 31670  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  31671 tgagataattaactaattatc 31691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 113 - 197
Target Start/End: Complemental strand, 53053 - 52969
Alignment:
Q  113 aaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcag 197  Q
    |||||||||||||||||||  ||||||||||||| |||| |||| ||||||||||||||||||| |||||||||| |||||||||    
T  53053 aaacggaatgctacacttctaaaaatcataaatgggatagttaactaattatccttcaacataattcaattccaaaacattgcag 52969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 31707 - 31785
Alignment:
Q  81 aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatgagataattaattaattatc 165  Q
    |||||||||||||||| |||||||||||||| ||      |||||||||||  ||||||||||||||||||||||| ||||||||    
T  31707 aacatatatcagagtaatcaacacataaacgaaa------tgctacacttctaaaaatcataaatgagataattaactaattatc 31785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 58; Significance: 2e-24; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 197
Target Start/End: Original strand, 40385 - 40530
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacata-tatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || |||||||||||||||||||| ||||||||||  |||||||      ||||||||||  ||||||||| || || ||||||    
T  40385 tgtaacaccccgttttcccaacttaaaaatttcaaacatattatcagagtaaacaacaca------taaacggaattatacacttca-aagattataaat 40477  T
Q  146 gagataattaattaattatccttcaacataaatc-aattccaagacattgcag 197  Q
     |||||||||| ||||||||||||||| |||||| |||||||| |||||||||    
T  40478 aagataattaactaattatccttcaacgtaaatcaaattccaaaacattgcag 40530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 86982 - 87042
Alignment:
Q  112 taaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||||||||||| | ||||||||||||   |||||||| ||||||||||||||    
T  86982 taaacggaatgctacacttcttaaaaatcataaattgaataattaactaattatccttcaa 87042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 40571 - 40632
Alignment:
Q  222 gcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    ||||||||||||  |||||||| ||||||||||||||| ||||||| ||| |||||||||||||    
T  40571 gcctcatcaaaatgtctcataattcagttaaacaactt-atcattt-aaattcataaaacaaat 40632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 265
Target Start/End: Original strand, 132062 - 132117
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||| ||||| |||||||||||| |||||||||| |||||||||||||||| ||||    
T  132062 ttggcacgcaggcctcatcaaaatatctcataaattcagttaaacaacttattcat 132117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 47 - 169
Target Start/End: Original strand, 1096 - 1213
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaa-catatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || || ||||||||||||| ||  |||||||||||||| ||||||||      ||||||||||||||||  ||||||||||||    
T  1096 tgtaacaccccgttttcccaacataaaaatttcaaaacaattatcagagtattcagcacataaa------cggaatgctacacttctaaaaatcataaat 1189  T
Q  146 gagataattaattaattatccttc 169  Q
    ||||||||||||||||||| ||||    
T  1190 gagataattaattaattattcttc 1213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 31294 - 31420
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||| |||||||| || |||||||||||||||||||||| |||| |||| ||||| |||||||      ||||||||||||||| |||||| ||||     
T  31294 tgtaacaacccgttttcccaacttaaaaatttcaaacatataatcagtgtat-caacatataaacg------gaatgctacacttca-aaaatcgtaaac 31385  T
Q  146 gagataattaattaattatccttcaacataaatca 180  Q
    ||||||||||| |||||||||||||||||||||||    
T  31386 gagataattaactaattatccttcaacataaatca 31420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 9699 - 9813
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||| ||||||| |||||||||||||  |||||| |||||||||| ||||||||      ||||| ||||||||||||||  |||||||||||    
T  9699 tgtaacaccccatttttccaacttaaaaatttcataaacatttatcagagtaatcaacaca------taaacagaatgctacacttctaaaaatcataaa 9792  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  9793 tgagataattaactaattatc 9813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 104605 - 104479
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataa 143  Q
    ||||||||||||||||| || |  ||||||||||| ||||| |||||||||||||||||||||      |||||||||||||||||| | ||||||||||    
T  104605 ttgtaacaccccgttttcccaaactaaaaatttcataacatttatcagagtattcaacacata------aacggaatgctacacttcttaaaaatcataa 104512  T
Q  144 atgagataattaattaattatccttcaacataa 176  Q
    ||||||||| |||  | ||||||||||||||||    
T  104511 atgagataaataacaatttatccttcaacataa 104479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 10274 - 10322
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagt 95  Q
    |||||||||||||||| || |||||||||||||| | ||| ||||||||    
T  10274 tgtaacaccccgttttcccaacttaaaaatttcacatataaatcagagt 10322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 9577 - 9702
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaa-catatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||| ||||||||||| |  || ||||||||||| | ||| |||||||||||||||||||||||      |||||||||||||||| ||||||||||||    
T  9577 ttgtagcaccccgttttccgaacataaaaatttcatagcatttatcagagtattcaacacataaa------cggaatgctacacttcttaaaatcataaa 9670  T
Q  145 tgagataattaattaattatccttcaacataa 176  Q
    |||||||| |||  | ||||||||||||||||    
T  9671 tgagataaataacaatttatccttcaacataa 9702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 9044 - 8927
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||| ||||||||| || || ||||||||||| ||||| |||||||||| ||||||||||||||      |||||||||||||| ||| ||||| |||    
T  9044 tgtaaccccccgttttcccaacataaaaatttcataacatttatcagagtaatcaacacataaacg------gaatgctacacttcttaagatcattaat 8951  T
Q  146 gagataattaattaattatccttc 169  Q
    ||||||||||| ||||||||||||    
T  8950 gagataattaactaattatccttc 8927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 165
Target Start/End: Original strand, 24869 - 24984
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcata 142  Q
    |||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||       |||| ||||| |||||||| | |||||||||    
T  24869 tttgtaacaccccgttttcccaacttaaaaatttcataacaaatatcagagtattcaacaca-------aaacagaatgatacacttcttaaaaatcata 24961  T
Q  143 aatgagataattaattaattatc 165  Q
    |||||||||||||| ||||||||    
T  24962 aatgagataattaactaattatc 24984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 3092 - 2978
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataa 143  Q
    ||||||||||||||||| || |||||||||||||| || | |||||||||||||||||||||       |||||||||||||||||| | ||||| ||||    
T  3092 ttgtaacaccccgttttcccaacttaaaaatttcataataaatatcagagtattcaacacat-------aacggaatgctacacttcttaaaaataataa 3000  T
Q  144 atgagataattaattaattatc 165  Q
    ||||||||||||| ||||||||    
T  2999 atgagataattaactaattatc 2978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 9043 - 8919
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || || ||||||||||| |||| ||||||| ||||||||||||||      |||||||||||||| ||| ||||||  |||||    
T  9043 tgtaacaccccgttttcccaacataaaaatttcataacaaatatcagcgtattcaacacata------aacggaatgctacaattcttaaaattgtaaat 8950  T
Q  146 gagataattaattaattatccttcaacataa 176  Q
    ||||||||| |  ||||||||||||||||||    
T  8949 gagataattgacaaattatccttcaacataa 8919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 10191 - 10133
Alignment:
Q  40 tgtcctttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    |||| |||||||||||||||||| || |||||||||||||| | ||| |||| ||||||    
T  10191 tgtcatttgtaacaccccgttttcccaacttaaaaatttcacatataaatcaaagtatt 10133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 52; Significance: 8e-21; HSPs: 3)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 5574 - 5507
Alignment:
Q  113 aaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 180  Q
    |||||||||| ||||| || |||||||||||||||||||||||| |||||||||||||||||||||||    
T  5574 aaacggaatgatacacatcttaaaatcataaatgagataattaactaattatccttcaacataaatca 5507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 265
Target Start/End: Complemental strand, 5462 - 5407
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||| ||||| ||||||||||||||||||||||| ||| |||||||||||||||||    
T  5462 ttggcacgcaagcctcatcaaaacatctcataaattcaattaaacaacttaatcat 5407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 169
Target Start/End: Original strand, 221450 - 221567
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    ||||||||||||||||  | || ||||||||||  ||||  |||||||||||||| ||||||||      |||||||| ||||| | |||||||||||||    
T  221450 tgtaacaccccgttttctcaacataaaaatttcctaacaattatcagagtattcatcacataaa------cggaatgcaacactccttaaaatcataaat 221543  T
Q  146 gagataattaattaattatccttc 169  Q
       |||||||| ||||||||||||    
T  221544 agaataattaactaattatccttc 221567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0820 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0820
Description:

Target: scaffold0820; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 3910 - 3797
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    |||||||||||||||| || |||||||||||||| || | |||||||||||||||||||||       |||||||||||||||||| | ||||| |||||    
T  3910 tgtaacaccccgttttcccaacttaaaaatttcataataaatatcagagtattcaacacat-------aacggaatgctacacttcttaaaaataataaa 3818  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  3817 tgagataattaactaattatc 3797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 80 - 197
Target Start/End: Original strand, 11955 - 12065
Alignment:
Q  80 aaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc 179  Q
    |||||| |||||||||| ||||||||||||||      ||||| |||||||| ||||||||||||| |||||||||| |||||||||||||||||||       
T  11955 aaacatttatcagagtaatcaacacataaacg------gaatgttacacttc-taaaatcataaataagataattaactaattatccttcaacataatcg 12047  T
Q  180 aattccaagacattgcag 197  Q
    |||||||| |||||||||    
T  12048 aattccaaaacattgcag 12065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 285
Target Start/End: Original strand, 12088 - 12171
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcata---aatcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    |||||| |||| ||||| |||||||||||||||||||||   | ||||||||||||||||||||||| ||| |||||||| ||||    
T  12088 ataagtcttggcacgcaggcctcatcaaaacatctcataattattcagttaaacaacttaatcattt-aaattcataaaaaaaat 12171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 84430 - 84553
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || |||||||||||||| ||||| |||||||||| ||||| ||      ||||||||||||||||||||  ||||||||||||    
T  84430 tgtaacaccccgttttcccaacttaaaaatttcataacatttatcagagtaatcaacgca------taaacggaatgctacacttctaaaaatcataaat 84523  T
Q  146 gagataattaattaattatccttcaacata 175  Q
    ||||||| |||  | ||||||| |||||||    
T  84524 gagataaataacaatttatcctccaacata 84553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 158389 - 158449
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||| ||||||||||||||    
T  158389 taaacggaatgctacacttcttaaaaatcataaatggaataattaactaattatccttcaa 158449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 169
Target Start/End: Complemental strand, 191 - 77
Alignment:
Q  50 aacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatgag 148  Q
    ||||||| ||||| || || ||||||||||| ||||| |||||||||| ||||||||||||||      |||||||||||||| ||||| |||||||||     
T  191 aacaccctgttttcccaacataaaaatttcataacatttatcagagtaatcaacacataaacg------gaatgctacacttcttaaaaacataaatgat 98  T
Q  149 ataattaattaattatccttc 169  Q
    |||||||| ||||||||||||    
T  97 ataattaactaattatccttc 77  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 2956 - 2842
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataaa 144  Q
    |||||||||||||||| || || ||||||||||| ||||  ||||||||||||||| ||      ||||||||||||||||||||| ||||| |||||||    
T  2956 tgtaacaccccgttttcccaacataaaaatttcataacaattatcagagtattcaatac------gtaaacggaatgctacacttcttaaaaatcataaa 2863  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  2862 tgagataattaactaattatc 2842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 180
Target Start/End: Complemental strand, 4045 - 3916
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcat-aa 143  Q
    ||||||||||||||||| || ||||||||||||||||||||| ||||||||| ||| || |      |||| |||||||||||||||| |||||| | ||    
T  4045 ttgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagtagtcatcata------taaatggaatgctacacttca-aaaatcttaaa 3953  T
Q  144 atgagataattaattaattatccttcaacataaatca 180  Q
    |  |||||||||| |||||||||||||||||||||||    
T  3952 acaagataattaactaattatccttcaacataaatca 3916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 180
Target Start/End: Complemental strand, 8605 - 8476
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcat-aa 143  Q
    ||||||||||||||||| || ||||||||||||||||||||| ||||||||| ||| || |      |||| |||||||||||||||| |||||| | ||    
T  8605 ttgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagtagtcatcata------taaatggaatgctacacttca-aaaatcttaaa 8513  T
Q  144 atgagataattaattaattatccttcaacataaatca 180  Q
    |  |||||||||| |||||||||||||||||||||||    
T  8512 acaagataattaactaattatccttcaacataaatca 8476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 861 - 736
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || ||||||||||||||   |  || |||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  861 ttgtaacaccccgttttcccgacttaaaaatttcatttaattaatcagagtattcaacat------gtaaacggaatgctacacttcataaaatcataaa 768  T
Q  145 tgagataattaattaa-ttatccttcaacata 175  Q
    | || ||||||| ||| |||||||||||||||    
T  767 taagttaattaactaatttatccttcaacata 736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 4445 - 4320
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || ||||||||||||||   |  || |||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  4445 ttgtaacaccccgttttcccgacttaaaaatttcatttaattaatcagagtattcaacat------gtaaacggaatgctacacttcataaaatcataaa 4352  T
Q  145 tgagataattaattaa-ttatccttcaacata 175  Q
    | || ||||||| ||| |||||||||||||||    
T  4351 taagttaattaactaatttatccttcaacata 4320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 160863 - 160738
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || ||||||||||||||   |  || |||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  160863 ttgtaacaccccgttttcccgacttaaaaatttcatttaattaatcagagtattcaacat------gtaaacggaatgctacacttcataaaatcataaa 160770  T
Q  145 tgagataattaattaa-ttatccttcaacata 175  Q
    | || ||||||| ||| |||||||||||||||    
T  160769 taagttaattaactaatttatccttcaacata 160738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 163
Target Start/End: Complemental strand, 165628 - 165517
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    |||||||||||||||| || |||||||||||||| || | |||||||||||||||||||||       |||||||||||||||||| | ||||| |||||    
T  165628 tgtaacaccccgttttcccaacttaaaaatttcataataaatatcagagtattcaacacat-------aacggaatgctacacttcttaaaaataataaa 165536  T
Q  145 tgagataattaattaatta 163  Q
    |||||||||||| ||||||    
T  165535 tgagataattaactaatta 165517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 162053 - 161939
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataa 143  Q
    ||||||||||||||||| || |||||||||||||| || | |||||||||||||||||| ||       |||||||||||||||||| | ||||| ||||    
T  162053 ttgtaacaccccgttttcccaacttaaaaatttcataataaatatcagagtattcaacatat-------aacggaatgctacacttcttaaaaataataa 161961  T
Q  144 atgagataattaattaattatc 165  Q
    ||||||||||||| ||||||||    
T  161960 atgagataattaactaattatc 161939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 17419 - 17354
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacg 111  Q
    |||||||||||||||| || |||||||||||||| ||||| |||||||||| ||||||||||||||    
T  17419 tgtaacaccccgttttcccaacttaaaaatttcataacatttatcagagtaatcaacacataaacg 17354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 179
Target Start/End: Complemental strand, 4273 - 4147
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaatg 146  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||||    || ||||  || ||||||| ||   ||||||| ||||| |||||| |    
T  4273 tgtaacaccccgttttcccaacttaaaaatttcaaacatatttcagagt----aaaacat-cacataaacgggatatcacacttcttaaaa-cataaaag 4180  T
Q  147 agataattaattaattatccttcaacataaatc 179  Q
    |||||||||| ||||||||||||||||||||||    
T  4179 agataattaactaattatccttcaacataaatc 4147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 4087 - 4027
Alignment:
Q  225 tcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaat 285  Q
    ||||| || |||||||||||||||||||||| ||| ||||||| | | |||||||||||||    
T  4087 tcatccaatcatctcataaatcagttaaacatctttatcatttaatattcataaaacaaat 4027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 50025 - 50149
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaat 145  Q
    |||||||||||||||| || ||||||||||||||   |  || |||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  50025 tgtaacaccccgttttcccgacttaaaaatttcatttaattaatcagagtattcaacat------gtaaacggaatgctacacttcataaaatcataaat 50118  T
Q  146 gagataattaattaa-ttatccttcaacata 175  Q
     || ||||||| ||| |||||||||||||||    
T  50119 aagttaattaactaatttatccttcaacata 50149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 2926 - 3011
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 197  Q
    |||||||||||| ||||||| ||||||| ||||  |||||||||||||||||||||||||||||| || |||||||| |||||||||    
T  2926 taaacggaatgcaacacttc-taaaatcgtaaacaagataattaattaattatccttcaacataattcaaattccaaaacattgcag 3011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 265
Target Start/End: Original strand, 3041 - 3096
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||| ||||| |||||||||||| |||||||||| |||||||||||||||| ||||    
T  3041 ttggcacgcaggcctcatcaaaatatctcataaattcagttaaacaacttattcat 3096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 11002 - 10937
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaa 177  Q
    |||||||||||||||||| |  || |||||||||||||||||||| ||||||||||||||||||||    
T  11002 taaacggaatgctacactactaaatatcataaatgagataattaactaattatccttcaacataaa 10937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 10867 - 10823
Alignment:
Q  222 gcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  10867 gcctcatcaaaacatctcataaattcagttaaacaacataatcat 10823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 46 - 177
Target Start/End: Original strand, 37033 - 37159
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacata-tatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || || ||||||||||||||||| ||||||||||   ||||||      ||||||||||||||||||||  ||  |||||||    
T  37033 ttgtaacaccccgttttcccaacgtaaaaatttcaaacatattatcagagtaagaaacaca------taaacggaatgctacacttctaaagttcataaa 37126  T
Q  145 tgagataattaattaattatccttcaacataaa 177  Q
    |||| ||||||| |||||| ||||| |||||||    
T  37127 tgaggtaattaactaattaaccttcgacataaa 37159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 3316 - 3265
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagta 96  Q
    |||||||||||||||| || |||||||||||||  |||||| ||||||||||    
T  3316 tgtaacaccccgttttcccaacttaaaaatttcataaacatttatcagagta 3265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 73055 - 73177
Alignment:
Q  50 aacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaatga 147  Q
    ||||||||||||| || || ||||||||||| ||||  |||||||||||||||||||      |||||| ||||||||||||| | ||||||||||||||    
T  73055 aacaccccgttttcccaacataaaaatttcataacaattatcagagtattcaacaca------taaacgaaatgctacacttcttaaaaatcataaatga 73148  T
Q  148 gataattaattaattatccttcaacataa 176  Q
    ||||| |||  | ||||||||||||||||    
T  73149 gataaataacaatttatccttcaacataa 73177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 148
Target Start/End: Original strand, 42882 - 42980
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataa 143  Q
    ||||||||||||||||  || || ||||||||| | ||||  |||||||||||||||||||      |||||||||||||||||||| | ||||||||||    
T  42882 ttgtaacaccccgtttccccaacataaaaattttataacaattatcagagtattcaacaca------taaacggaatgctacacttcttaaaaatcataa 42975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 148
Target Start/End: Original strand, 76602 - 76700
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataa 143  Q
    ||||||||||||||||  || || ||||||||| | ||||  |||||||||||||||||||      |||||||||||||||||||| | ||||||||||    
T  76602 ttgtaacaccccgtttccccaacataaaaattttataacaattatcagagtattcaacaca------taaacggaatgctacacttcttaaaaatcataa 76695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 176
Target Start/End: Original strand, 266583 - 266708
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataaa 144  Q
    ||||||||| ||||||||| || | ||||||||| ||||  ||| |||||||||||||||||||||      |||||||||||||| ||||| |||||||    
T  266583 tgtaacacctcgtttttccaacattaaaatttcataacaattattagagtattcaacacataaacg------gaatgctacacttcttaaaaatcataaa 266676  T
Q  145 tgagataattaattaattatccttcaacataa 176  Q
    |||||||| |||  | ||||||||||||||||    
T  266677 tgagataaataacaatttatccttcaacataa 266708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 167425 - 167365
Alignment:
Q  50 aacaccccgtttttccta-cttaaaaatttcaaacatatatcagagtattcaacacataaac 110  Q
    |||||||||||||||| | | ||||||||||| | ||| |||||||||||||||||||||||    
T  167425 aacaccccgtttttcccaacataaaaatttcacatata-atcagagtattcaacacataaac 167365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 174
Target Start/End: Complemental strand, 5598 - 5473
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttc-ataaaatcata 142  Q
    |||||||||||||||||||| |||||||||||||  |||||| |||||||||| ||| |||||       |||||||||||||||||| | |||||||||    
T  5598 ttgtaacaccccgtttttccaacttaaaaatttcataaacatttatcagagtaatcatcacat-------aacggaatgctacacttctaaaaaatcata 5506  T
Q  143 -aatgagataattaattaattatccttcaacat 174  Q
     ||  ||||||||||  ||||||||||||||||    
T  5505 gaaacagataattaacaaattatccttcaacat 5473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 1189 - 1075
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatata-tcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataa 143  Q
    ||||||||||||||||| || || |||||||||||   | ||| ||||||||||||||||||||       |||||||||||||||| ||||| ||||||    
T  1189 ttgtaacaccccgttttcccaacataaaaatttcatttaaataatcagagtattcaacacataa-------cggaatgctacacttcttaaaagtcataa 1097  T
Q  144 atgagataattaattaattatc 165  Q
    ||||||||||||| ||||||||    
T  1096 atgagataattaactaattatc 1075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 1656 - 1604
Alignment:
Q  114 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 165  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| | ||||||    
T  1656 aacggaatgctacacttcttaaaaatcataaatgagataattaacttattatc 1604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 5881 - 5994
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataaa 144  Q
    |||||||||||||||| || || ||||||||||| || |  ||||||||||||||||||||||       |||||||||||||||| ||||| | |||||    
T  5881 tgtaacaccccgttttcccaacataaaaatttcataataattatcagagtattcaacacataa-------cggaatgctacacttcttaaaaataataaa 5973  T
Q  145 tgagataattaattaattatc 165  Q
    |||||||||||| ||||||||    
T  5974 tgagataattaactaattatc 5994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 4768 - 4893
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataa 143  Q
    ||||||||||||||||| || || ||||||||||| || || |||||||||| ||||||||      ||||| |||||||||||||| | ||||||||||    
T  4768 ttgtaacaccccgttttcccaacataaaaatttcataatatttatcagagtaatcaacaca------taaacagaatgctacacttcttaaaaatcataa 4861  T
Q  144 atgagataattaattaattatccttcaacata 175  Q
    ||||||||| |||  | ||||| |||||||||    
T  4862 atgagataaataacaatttatctttcaacata 4893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 22574 - 22443
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacata-tatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||||||||| || |||||||||||||||||||| |||||||||    || ||||  || ||||||| ||   ||||||| |||| |||||||    
T  22574 ttgtaacaccccgttttcccaacttaaaaatttcaaacatattatcagagt----aaaacat-cacataaacgggatatcacacttcttaaagtcataaa 22480  T
Q  145 tgagataattaattaattatcct--tcaacataaatc 179  Q
     ||||||||||| ||||||||||  ||||||||||||    
T  22479 agagataattaactaattatcctcgtcaacataaatc 22443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 39572 - 39517
Alignment:
Q  125 acacttcataaaatcataaatgagataattaattaattatcct--tcaacataaat 178  Q
    ||||||| |||| ||||||| ||||||||||| ||||||||||  |||||||||||    
T  39572 acacttcttaaagtcataaaagagataattaactaattatcctcgtcaacataaat 39517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2014 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold2014
Description:

Target: scaffold2014; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 176
Target Start/End: Original strand, 184 - 309
Alignment:
Q  47 tgtaacaccccgtttttccta-cttaaaaatttca--aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataa 143  Q
    ||||||||||||||||||| | |||| ||||||||  ||||| |||||||||| ||||||||      |||||||||||||||| ||| | |||||||||    
T  184 tgtaacaccccgtttttcccaacttataaatttcataaacatttatcagagtaatcaacaca------taaacggaatgctacatttc-ttaaatcataa 276  T
Q  144 atgagataattaattaattatccttcaacataa 176  Q
    ||||||||| |||  | |||||||||| |||||    
T  277 atgagataaataacaatttatccttcagcataa 309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2014; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 349 - 408
Alignment:
Q  204 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaat 262  Q
    |||||| |||| ||| | ||||||||||||||||||||||| ||||||||||||||||||    
T  349 ataagtcttggcacgtaggcctcatcaaaacatctcataaattcagttaaacaacttaat 408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 7665 - 7715
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacata-tatcagagta 96  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  7665 tgtaacaccccgtttttccaacttaaaaatttcaaacatattatcagagta 7715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 17545 - 17421
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca--aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataaa 144  Q
    ||||||||||| |||| || ||||||||||||||  ||||| |||||||||| |||||| ||||       ||||||| ||||||||  |||||||||||    
T  17545 tgtaacaccccattttcccaacttaaaaatttcataaacatttatcagagtaatcaacaaataa-------cggaatgttacacttctaaaaatcataaa 17453  T
Q  145 tgagataattaattaattatccttcaacataa 176  Q
      ||||||||||  ||||||| ||||||||||    
T  17452 acagataattaacaaattatctttcaacataa 17421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 31853 - 31911
Alignment:
Q  207 agttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 265  Q
    |||||||| ||||| |||||||||| || ||||||| ||||||||||||||||||||||    
T  31853 agttttggcacgcaggcctcatcaagacgtctcatatatcagttaaacaacttaatcat 31911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 178225 - 178283
Alignment:
Q  207 agttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 265  Q
    |||||||| ||||| |||||||||| |  ||||||||||||||||||||||||||||||    
T  178225 agttttggcacgcaggcctcatcaagatgtctcataaatcagttaaacaacttaatcat 178283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 97646 - 97590
Alignment:
Q  114 aacggaatgctacacttcataaa-atcataaatgagataattaattaattatccttc 169  Q
    ||||||||||||||||||  ||| || ||||||||||||||||| |||| |||||||    
T  97646 aacggaatgctacacttctaaaatataataaatgagataattaactaatcatccttc 97590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 2760 - 2695
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacg 111  Q
    |||||||||||||||| || |||||||||||||| ||||  |||||||||| ||||||||||||||    
T  2760 tgtaacaccccgttttcccaacttaaaaatttcataacaattatcagagtaatcaacacataaacg 2695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 21985 - 21932
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatc 165  Q
    ||||||||||||||||||||  |||||| |||||||||||||||| ||||||||    
T  21985 taaacggaatgctacacttctaaaaatcgtaaatgagataattaactaattatc 21932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 24980 - 24927
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatc 165  Q
    ||||||||||||||||||||  |||||| |||||||||||||||| ||||||||    
T  24980 taaacggaatgctacacttctaaaaatcgtaaatgagataattaactaattatc 24927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 14657 - 14560
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcata 142  Q
    |||||||||||||||||| || |  ||||||||||| ||||  |||||||||||||||||||||      |||||||||||||||||| | |||||||||    
T  14657 tttgtaacaccccgttttcccaatataaaaatttcataacaattatcagagtattcaacacata------aacggaatgctacacttcttaaaaatcata 14564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 174
Target Start/End: Original strand, 27048 - 27173
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttc-ataaaatcata 142  Q
    ||||||||||||||||| || |||||||||||||  |||||| |||||||||| ||| |||||       ||| |||||||||||||| | |||||||||    
T  27048 ttgtaacaccccgttttcccaacttaaaaatttcataaacatttatcagagtaatcatcacat-------aacagaatgctacacttctaaaaaatcata 27140  T
Q  143 -aatgagataattaattaattatccttcaacat 174  Q
     ||  ||||||||||  ||||||||||||||||    
T  27141 gaaacagataattaacaaattatccttcaacat 27173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 265
Target Start/End: Original strand, 2288 - 2343
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||| |||||||||||||||||| |||||||||| |||||||||||||||| ||||    
T  2288 ttggcacgcatgcctcatcaaaatatctcataaattcagttaaacaacttattcat 2343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 33099 - 33034
Alignment:
Q  47 tgtaacaccccgttttt--cctacttaaaaatttcaaacatatatcagagtattcaacacataaacg 111  Q
    |||||||||||||||||  || || ||||||||||| | ||| ||||||||||||||||||||||||    
T  33099 tgtaacaccccgttttttcccaacataaaaatttcacatata-atcagagtattcaacacataaacg 33034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 265
Target Start/End: Original strand, 9683 - 9727
Alignment:
Q  222 gcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||||||||||| |||||||||| |||||||||||||||| ||||    
T  9683 gcctcatcaaaatatctcataaattcagttaaacaacttattcat 9727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 9478 - 9603
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaatcataa 143  Q
    |||||||||||||||||||| |||||||||||||  |||||| ||||||||||  ||||| ||       ||| ||||| ||||||||   |||||||||    
T  9478 ttgtaacaccccgtttttccaacttaaaaatttcataaacatttatcagagtaaacaacatat-------aacagaatgttacacttctacaaatcataa 9570  T
Q  144 atgagataattaattaattatccttcaacataa 176  Q
    |  ||||||||||  ||||||| ||||||||||    
T  9571 aatagataattaacaaattatctttcaacataa 9603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 3771 - 3826
Alignment:
Q  125 acacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 180  Q
    ||||||| ||||||| |||||| ||||||||| ||| |||||||||||||||||||    
T  3771 acacttcttaaaatcgtaaatgggataattaactaaatatccttcaacataaatca 3826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 265
Target Start/End: Original strand, 3870 - 3923
Alignment:
Q  211 ttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 265  Q
    |||| ||||| |||||||||||||||||||| ||| |||| ||||||||||||||    
T  3870 ttggcacgcaggcctcatcaaaacatctcattaat-agtttaacaacttaatcat 3923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 3141 - 3187
Alignment:
Q  134 aaaatcataaatgagataattaattaattatccttcaacataaatca 180  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||    
T  3141 aaaatcataaaacagataattaactaattatccttcaacataaatca 3187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 2801 - 2859
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttc 169  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||| ||||||||||||    
T  2801 taaacggaatgctacacttcttaaaaatcataaatggaataattaactaattatccttc 2859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 4587 - 4637
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  4587 tgtaacaccccgttttcccaacttaaaaatttcaaacatataatcagagta 4637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 2930 - 2868
Alignment:
Q  114 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  2930 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 2868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 26848 - 26894
Alignment:
Q  134 aaaatcataaatgagataattaattaattatccttcaacataaatca 180  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||    
T  26848 aaaatcataaaacagataattaactaattatccttcaacataaatca 26894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 8767 - 8829
Alignment:
Q  114 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  8767 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 8829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 177
Target Start/End: Complemental strand, 20772 - 20645
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcataaaa-tcataa 143  Q
    ||||||||||||||||  || || ||||||||||| ||||  |||||||||||||| || | |||||      |||||||||||||| ||||| ||||||    
T  20772 ttgtaacaccccgtttgcccaacataaaaatttcataacaattatcagagtattcatcatacaaacg------gaatgctacacttcttaaaaatcataa 20679  T
Q  144 atgagataattaattaattatccttcaacataaa 177  Q
    | ||||||| |||  | |||||||||||||||||    
T  20678 aggagataaataacaatttatccttcaacataaa 20645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 39136 - 39177
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata 88  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  39136 tgtaacaccccgttttcccaacttaaaaatttcaaacatata 39177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 37757 - 37819
Alignment:
Q  114 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  37757 aacggaatgctacacttctaaaaatcataaaaaagataattaacaaattatctttcaacataa 37819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 22926 - 22988
Alignment:
Q  114 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    |||||||||| |||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  22926 aacggaatgcaacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 22988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 57926 - 57988
Alignment:
Q  114 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  57926 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 57988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 175
Target Start/End: Original strand, 27737 - 27787
Alignment:
Q  125 acacttcataaaatcataaatgagataattaattaattatccttcaacata 175  Q
    ||||||| ||||||||||||||||||||||||  ||||||| |||||||||    
T  27737 acacttcttaaaatcataaatgagataattaacaaattatctttcaacata 27787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 83 - 42
Alignment:
Q  224 ctcatcaaaacatctcataaatcagttaaacaacttaatcat 265  Q
    |||||||| || ||||||||||||||||||||||||||||||    
T  83 ctcatcaagacgtctcataaatcagttaaacaacttaatcat 42  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 268 - 216
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    |||||||||||||||||| || || |||||||||||||||||| |||||||||    
T  268 tttgtaacaccccgttttcccaacataaaaatttcaaacatataatcagagta 216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 11349 - 11308
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttcaaacata 86  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  11349 tttgtaacaccccgttttcccaacttaaaaatttcaaacata 11308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 21205 - 21246
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat 87  Q
    ||||||||||||||||| || |||||||||||||||||||||    
T  21205 ttgtaacaccccgttttcccaacttaaaaatttcaaacatat 21246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 46194 - 46235
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatata 88  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  46194 tgtaacaccccgttttcccaacttaaaaatttcaaacatata 46235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 170
Target Start/End: Original strand, 27487 - 27606
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca-aacatatatcagagtattcaacacataaacgtaaacggaatgctacacttcat-aaaatcataaa 144  Q
    |||||||||||||||| || || ||||||||||| ||||  |||||||||||||| || |      |||||||||||||||||||| | |||||| ||||    
T  27487 tgtaacaccccgttttcccaacataaaaatttcataacaattatcagagtattcatcata------taaacggaatgctacacttcttaaaaatcttaaa 27580  T
Q  145 tgagataattaattaattatccttca 170  Q
    ||  |||| |||| | ||||||||||    
T  27581 tggaataaataataatttatccttca 27606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0964 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0964
Description:

Target: scaffold0964; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 3582 - 3642
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||| |||| ||||| |||||||||||| |||||||||| ||||| |||||||||||||||    
T  3582 aagtcttggcacgcaggcctcatcaaaatatctcataaattcagtcaaacaacttaatcat 3642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 1940 - 2004
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacata 175  Q
    ||||| |||||||||||||| ||||| ||||||||||||||| |||  | |||||||||||||||    
T  1940 taaacagaatgctacacttcgtaaaaatcataaatgagataaataacaatttatccttcaacata 2004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 6839 - 6779
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||| |||| ||||| |||||||||||| |||||||||| |||||||||||||||| ||||    
T  6839 aagtattggcacgcaggcctcatcaaaatatctcataaattcagttaaacaacttattcat 6779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 8001 - 7949
Alignment:
Q  120 atgctacacttcataa-aatcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||  ||| |||||||||||| |||||||||||||||||||||||    
T  8001 atgctacactttttaagaatcataaatgaaataattaattaattatccttcaa 7949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 4203 - 4263
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||| |||| ||||| |||||||||||| |||||||||| |||||| ||||||||||||||    
T  4203 aagtcttggcacgcaggcctcatcaaaatatctcataaattcagttgaacaacttaatcat 4263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 340890 - 340842
Alignment:
Q  49 taacaccccgtttttcctacttaaaaatttcaaacata-tatcagagta 96  Q
    |||||||||||||| || |||||||||||||||||||| ||||||||||    
T  340890 taacaccccgttttcccaacttaaaaatttcaaacatattatcagagta 340842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 265
Target Start/End: Complemental strand, 411866 - 411816
Alignment:
Q  216 acgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    ||||| |||||||||||| |||||||||| |||||||||||||||| ||||    
T  411866 acgcaggcctcatcaaaatatctcataaattcagttaaacaacttattcat 411816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 6051 - 6000
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    ||||||||||||||||| || || |||||||||||||||||| |||||||||    
T  6051 ttgtaacaccccgttttcccaacataaaaatttcaaacatataatcagagta 6000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 7425 - 7476
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    |||||||||||||||| || |||||||||||||| | ||| |||||||||||    
T  7425 tgtaacaccccgttttcccaacttaaaaatttcacatataaatcagagtatt 7476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 13081 - 13132
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    ||||||||||||||||| || |||| |||||||||||||||| |||||||||    
T  13081 ttgtaacaccccgttttcccaacttcaaaatttcaaacatataatcagagta 13132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 23183 - 23238
Alignment:
Q  207 agttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaat 262  Q
    |||||||| ||||| |||||||||| |  |||||||||| ||||||||||||||||    
T  23183 agttttggcacgcaggcctcatcaagatgtctcataaattagttaaacaacttaat 23238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 45357 - 45306
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttc-aaacatatatcagagta 96  Q
    ||||||||||||||||| || ||||||||||||| |||||| ||||||||||    
T  45357 ttgtaacaccccgttttcccaacttaaaaatttcaaaacatttatcagagta 45306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 482 - 533
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    ||||||||||||||||| || |||||||||| |||||||||| |||||||||    
T  482 ttgtaacaccccgttttcccaacttaaaaatgtcaaacatataatcagagta 533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 13281 - 13340
Alignment:
Q  113 aaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaa 171  Q
    ||||||||||||||||||||| ||||||||||| |  |||||||| ||||| ||||||||    
T  13281 aaacggaatgctacacttcataaaaatcataaagggaataattaactaattttccttcaa 13340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 3477 - 3529
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagta 96  Q
    ||||||||||||||||| || |||||||||||||  |||||| ||||||||||    
T  3477 ttgtaacaccccgttttcccaacttaaaaatttcataaacatttatcagagta 3529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 71785 - 71718
Alignment:
Q  109 acgtaaacggaatgctacacttcat-----aaaatcataaatgagataattaattaattatccttcaa 171  Q
    ||||||||||||||||||||||| |     |||||||||||||  |||||||| ||||||||||||||    
T  71785 acgtaaacggaatgctacacttcttttcctaaaatcataaatggaataattaactaattatccttcaa 71718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 14576 - 14514
Alignment:
Q  114 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 176  Q
    ||||||||||||||||||  |||||||| ||  ||||||||||  ||||||| ||||||||||    
T  14576 aacggaatgctacacttctaaaaatcattaaacagataattaacaaattatctttcaacataa 14514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 175
Target Start/End: Original strand, 2737 - 2787
Alignment:
Q  125 acacttcataaaatcataaatgagataattaattaattatccttcaacata 175  Q
    ||||||| ||||||| ||||||||||||||||  ||||||| |||||||||    
T  2737 acacttcttaaaatcgtaaatgagataattaacaaattatctttcaacata 2787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 175
Target Start/End: Original strand, 9774 - 9824
Alignment:
Q  125 acacttcataaaatcataaatgagataattaattaattatccttcaacata 175  Q
    ||||||| ||||||| ||||||||||||||||  ||||||| |||||||||    
T  9774 acacttcttaaaatcgtaaatgagataattaacaaattatctttcaacata 9824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 18262 - 18224
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaaca 84  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  18262 ttgtaacaccccgttttcccaacttaaaaatttcaaaca 18224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 12568 - 12624
Alignment:
Q  125 acacttcataaaatcataaatgagataattaattaattatcct--tcaacataaatc 179  Q
    ||||||| |||||||||||| |||||| |||| ||||||||||  ||||||||||||    
T  12568 acacttcttaaaatcataaaagagatacttaactaattatcctcgtcaacataaatc 12624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 114259 - 114324
Alignment:
Q  46 ttgtaacaccccgtttttccta-cttaaaaatttcaaacatatatcagagtattcaacacataaacg 111  Q
    |||||||||||||||| ||| | | ||||||||||| | ||| ||||||||||||||||||||||||    
T  114259 ttgtaacaccccgtttatcccaacataaaaatttcacatata-atcagagtattcaacacataaacg 114324  T

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Target: scaffold0601 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 9374 - 9337
Alignment:
Q  133 taaaatcataaatgagataattaattaattatccttca 170  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  9374 taaaatcataaatgggataattaactaattatccttca 9337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 80
Target Start/End: Original strand, 11195 - 11228
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttca 80  Q
    ||||||||||||||||||| ||||||||||||||    
T  11195 tgtaacaccccgtttttccaacttaaaaatttca 11228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 36523 - 36575
Alignment:
Q  47 tgtaacaccccgtttttcctact--taaaaatttcaaacata-tatcagagta 96  Q
    ||||||||||||||||||| |||  ||||||||||||||||| ||||||||||    
T  36523 tgtaacaccccgtttttccaacttataaaaatttcaaacatattatcagagta 36575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 30048 - 29996
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagta 96  Q
    ||||||||||||||||| || |||||||||||||  |||||| ||||||||||    
T  30048 ttgtaacaccccgttttcccaacttaaaaatttcataaacatttatcagagta 29996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 56699 - 56635
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtattcaacacataaacg 111  Q
    ||||||||||| ||||| || || ||||||||||  | ||| ||||||||||||||||||||||||    
T  56699 ttgtaacaccctgttttcccaacataaaaatttcgcatata-atcagagtattcaacacataaacg 56635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 56061 - 56125
Alignment:
Q  47 tgtaacaccccgtttttccta-cttaaaaatttcaaacatatatcagagtattcaacacataaacg 111  Q
    ||||||||||||||||||| | | ||||||||||| | ||| ||||||||||||||| ||||||||    
T  56061 tgtaacaccccgtttttcccaacataaaaatttcacatata-atcagagtattcaactcataaacg 56125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 78289 - 78237
Alignment:
Q  47 tgtaacaccccgtttttcctact--taaaaatttcaaacata-tatcagagta 96  Q
    ||||||||||||||||||| |||  ||||||||||||||||| ||||||||||    
T  78289 tgtaacaccccgtttttccaacttataaaaatttcaaacatattatcagagta 78237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2007 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold2007
Description:

Target: scaffold2007; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 537 - 477
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 171  Q
    ||||||||||||||| |||| ||||| |||||||||  | |||||| ||||||||||||||    
T  537 taaacggaatgctacgcttcttaaaaatcataaatggaacaattaactaattatccttcaa 477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 4069 - 4029
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacata 86  Q
    ||||||||||| ||||| || ||||||||||||||||||||    
T  4069 ttgtaacaccctgttttcccaacttaaaaatttcaaacata 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 404 - 344
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||| |||| ||||| | |||||||||| |||||||||| |||||||||||||||| ||||    
T  404 aagtcttggcacgcaggtctcatcaaaatatctcataaactcagttaaacaacttattcat 344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 4889 - 4921
Alignment:
Q  112 taaacggaatgctacacttcataaaatcataaa 144  Q
    |||||||||||||||||||| ||||||||||||    
T  4889 taaacggaatgctacacttcttaaaatcataaa 4921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 6974 - 7026
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    |||||||||||||||||||| || |||| |||||| | ||| |||||||||||    
T  6974 ttgtaacaccccgtttttccaacataaatatttcacatataaatcagagtatt 7026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 1927 - 1879
Alignment:
Q  49 taacaccccgtttttcctacttaaaaatttcaaacatat-atcagagta 96  Q
    ||||||| |||||| || ||||||||||||||||||||| |||||||||    
T  1927 taacacctcgttttcccaacttaaaaatttcaaacatataatcagagta 1879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 372 - 424
Alignment:
Q  46 ttgtaacaccccgttttt-cctacttaaaaatttcaaacatat-atcagagta 96  Q
    |||||||||||||||||| || || |||||||||||||||||| |||||||||    
T  372 ttgtaacaccccgtttttcccaacataaaaatttcaaacatataatcagagta 424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 8039 - 7987
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    ||||||||||||||||| || ||||| |||||||| | ||| |||||||||||    
T  8039 ttgtaacaccccgttttcccaacttagaaatttcacatataaatcagagtatt 7987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 15231 - 15179
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    ||||||||||||||||| || ||||| |||||||| | ||| |||||||||||    
T  15231 ttgtaacaccccgttttcccaacttagaaatttcacatataaatcagagtatt 15179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 15872 - 15820
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    ||||||||||||||||| || |||| ||||||||| | ||| |||||||||||    
T  15872 ttgtaacaccccgttttcccaacttgaaaatttcacatataaatcagagtatt 15820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 20037 - 20097
Alignment:
Q  206 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 265  Q
    |||| |||| ||||| |||||||||||  |||||||||| |||||||||||||||| ||||    
T  20037 aagtcttggcacgcaggcctcatcaaagtatctcataaattcagttaaacaacttattcat 20097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 11832 - 11780
Alignment:
Q  114 aacggaatgctacacttcataaa-atcataaatgagataattaattaattatc 165  Q
    ||||||||||||||||||  ||| || ||||||||||||||||| ||||||||    
T  11832 aacggaatgctacacttctaaaatataataaatgagataattaactaattatc 11780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 23276 - 23224
Alignment:
Q  46 ttgtaacaccccgttttt-cctacttaaaaatttcaaacatat-atcagagta 96  Q
    |||||||||||||||||| || || |||||||||||||||||| |||||||||    
T  23276 ttgtaacaccccgtttttcccaacataaaaatttcaaacatataatcagagta 23224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 26211 - 26262
Alignment:
Q  47 tgtaacaccccgtttttcctacttaaaaatttc--aaacatatatcagagta 96  Q
    |||||||||||||||| || |||||||||||||  |||||| ||||||||||    
T  26211 tgtaacaccccgttttcccaacttaaaaatttcttaaacatttatcagagta 26262  T

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Target: scaffold0111 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 6255 - 6307
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    ||||||||||||||||| || |||| ||||||||| | ||| |||||||||||    
T  6255 ttgtaacaccccgttttcccaacttgaaaatttcatatataaatcagagtatt 6307  T

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Target: scaffold0109 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 45159 - 45211
Alignment:
Q  46 ttgtaacaccccgttttt-cctacttaaaaatttcaaacatat-atcagagta 96  Q
    |||||||||||||||||| || || |||||||||||||||||| |||||||||    
T  45159 ttgtaacaccccgtttttcccaacataaaaatttcaaacatataatcagagta 45211  T

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Target: scaffold0081 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 5600 - 5540
Alignment:
Q  112 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 171  Q
    |||||||||||| ||||||| ||||| |||||||||  |||||||| ||||| ||||||||    
T  5600 taaacggaatgccacacttcttaaaaatcataaatggaataattaactaattttccttcaa 5540  T

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Target: scaffold0063 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 42913 - 42857
Alignment:
Q  45 tttgtaacaccccgtttttcctacttaaaaatttcaaacatat-atcagagtattca 100  Q
    ||||||||||||||||||||| || ||||||||||| | | || |||||||||||||    
T  42913 tttgtaacaccccgtttttccaacataaaaatttcataaaaataatcagagtattca 42857  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 47251 - 47199
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    ||||||||||| ||||| || |||||||||||||| | ||| |||||||||||    
T  47251 ttgtaacaccctgttttcccaacttaaaaatttcacatataaatcagagtatt 47199  T

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Target: scaffold0035 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 60014 - 59962
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    ||||||||||||||||| |  |||||||||||||| | ||| |||||||||||    
T  60014 ttgtaacaccccgttttcctaacttaaaaatttcacatataaatcagagtatt 59962  T

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Target: scaffold0029 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 10586 - 10642
Alignment:
Q  114 aacggaatgctacacttcataaa-atcataaatgagataattaattaattatccttc 169  Q
    ||||||||||||||||||  ||| || ||||||||||||||||| |||| |||||||    
T  10586 aacggaatgctacacttctaaaatataataaatgagataattaactaatcatccttc 10642  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 8392 - 8340
Alignment:
Q  46 ttgtaacaccccgtttttcctacttaaaaatttcaaacatatatcagagtatt 98  Q
    ||||||||||||||||| || |||||||||||||| | | | |||||||||||    
T  8392 ttgtaacaccccgttttcccaacttaaaaatttcacataaaaatcagagtatt 8340  T

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