View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6339_high_38 (Length: 297)
Name: NF6339_high_38
Description: NF6339
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6339_high_38 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 19 - 297
Target Start/End: Original strand, 51756120 - 51756398
Alignment:
| Q |
19 |
ggtggtatacatgccaagatttaacggtgattaatggcaacgttgttaggttttgggatgaagatttcgagtttgcttcctttgcaaatggaggaatcaa |
118 |
Q |
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| T |
51756120 |
ggtggtatacatgccaagatttaacggtgattaacggcaacgttgttaggttttgggatgaagagttcgagtttgcttcctttgcaaatggaggaatcaa |
51756219 |
T |
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| Q |
119 |
ataacagcttcagttgtatgttcttgtatggtagtaatcactaattagattagatagagaaacataagtatgttataataatattgctatcatcaatgta |
218 |
Q |
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| T |
51756220 |
ataacagcttcagctgtatgttcttgtatggtagtaatcactaattagattagatagagaaacataagtatgttataataatattgttatcatcaatgta |
51756319 |
T |
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| Q |
219 |
tatatggtggtgggttaattaatttggataacatatatcatgataagttgatatataatcctctcctcattcatgctct |
297 |
Q |
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| T |
51756320 |
tatatggtggtgggttaattaatttggataatatatatcatgataagttgatatataatcatctcctcattcatgctct |
51756398 |
T |
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