View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6339_low_29 (Length: 349)
Name: NF6339_low_29
Description: NF6339
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6339_low_29 |
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Alignment Details
Target: chr6 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 1 - 337
Target Start/End: Complemental strand, 21689963 - 21689627
Alignment:
| Q |
1 |
tctatagagctgcttttgattatcggttaaaacctttttgtcgagagccataccttttatattgacttcaaagtcaataccattttcaacaatgttccac |
100 |
Q |
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| T |
21689963 |
tctatagagctgcttttgattctcggttaaaacctttttgtcgagagccataccttttatattgacttcaaagtcaataccattttcaacaatgttccac |
21689864 |
T |
|
| Q |
101 |
atctcagcgtcaatactcatgatatggttgaaaatttcgtttttccataaagagaattgagcagcattgccattgaatataggacctttcttaggatagc |
200 |
Q |
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| T |
21689863 |
atctcagcatcaatactcatgatatggttgaaaatttcgtttttccataaagagaattgagcagcattgccattgaatataggacctttcttaggatagc |
21689764 |
T |
|
| Q |
201 |
tattgttcttagcttcaatctcaatgttgtcttcaacaatatcccatagatcatcatccatactcatactttcttggaataattgtctctttcatcttta |
300 |
Q |
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| T |
21689763 |
tgttgttcttagcttcaatctcaatgttgtcttcaacaatatcccatagatcatcatccatactcatgctttcttggaataattgtctccttcatcttta |
21689664 |
T |
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| Q |
301 |
aaggtgttgtaatcataatagacggttgcatgatgat |
337 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
21689663 |
aaggtgttgtaatcataatagacggttgcatgatgat |
21689627 |
T |
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