View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6340_low_1 (Length: 756)
Name: NF6340_low_1
Description: NF6340
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6340_low_1 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 644; Significance: 0; HSPs: 15)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 644; E-Value: 0
Query Start/End: Original strand, 20 - 747
Target Start/End: Complemental strand, 7005896 - 7005170
Alignment:
| Q |
20 |
attcaacctggttcgattgtgattcaatccaattaaatgggactatgatacaactggaatctagccaactggcggattggttggtgttcggttcaaccag |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7005896 |
attcaacctggttcgattgtgattcaatccaattaaatgggactatgatacaactggaacctagccaactggcggattggttggtgttcggttcaaccag |
7005797 |
T |
|
| Q |
120 |
ttgtactcaccagttcgatccaatatttaaaacattgataagacgttttaatcttaccctcccacttggtcttttacaaaccatggcctccaatcatcta |
219 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7005796 |
ttgtactcaccagttcaatccaatttttaaaacattgataagacgttttaatcttaccctcccacttggtcttttacaaaccatggcctccaatcatcta |
7005697 |
T |
|
| Q |
220 |
caatggagtagtttagatcccttatccatgcttgagtagagatgaaaggaacaactgcatcatgatctccactgccaacaacacatcaaaaagtctcatt |
319 |
Q |
| |
|
|||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7005696 |
caatggagtagtttagattccttatccaagcttgagtagagatgaaaggaacaactgcatcttgatctccactgccaacaacacatcaaaaagtctcatt |
7005597 |
T |
|
| Q |
320 |
gcttcaaaactgaaattaagagtaatttatacaaaccactcgactaacaaaggtgtctttcaactaagggtaaaaccgtgagcgcttacacaagacccaa |
419 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
7005596 |
gcttcaaaactgaaattaagagtaatttatacaaaccactcgactaacaaaggtgtctttcaactaagggtgaaaccgtgagcgcttacacaagacccaa |
7005497 |
T |
|
| Q |
420 |
agtgaaaaatacctacggaaaatggtgcaatagacttgagtttcaaccaccttctaaagcaaaattctcactttagacgaacttaatccaagaaaaagac |
519 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7005496 |
agtgaaaaatacctacggaaaatggtgcaatagacttgagtttcaaccaccttctaaagcaaaattctcactttagacgaacttaatccaagaaaaaga- |
7005398 |
T |
|
| Q |
520 |
tacatagatatggtgacaacacgagtctnnnnnnnnnnnncgctacattaaaagataaaatcttcacctgtatatcaaagaacggtatccttttttgctt |
619 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7005397 |
tacatagatatggtgacaacacgagtctaaaaagaaaaaacgctacattaaaagagaaaatcttcacctgtatatcaaagaacggtatccttttttgctt |
7005298 |
T |
|
| Q |
620 |
agatttgcatgaaactcaaagctaccaaatatatcatactcaaaattattcatgtaacaacgttcccatttccctatggttccctgcagggatcaaaatt |
719 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7005297 |
agatttgcatgaaactcaaagctaccaaatatatcatactcaaaatcattcatgtaacaacgttcccatttccctatggttccctgcagggatcaaaatt |
7005198 |
T |
|
| Q |
720 |
atgtacattaatatgatattgatgatgt |
747 |
Q |
| |
|
||||||||||||||||||||||| |||| |
|
|
| T |
7005197 |
atgtacattaatatgatattgataatgt |
7005170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 172 - 742
Target Start/End: Complemental strand, 7015536 - 7014967
Alignment:
| Q |
172 |
cttaccctcccacttggtcttttacaaaccatggcctccaatcatctacaatggagtagtttagatcccttatccatgcttgagtagagatgaaaggaac |
271 |
Q |
| |
|
|||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
7015536 |
cttaccctcctacttggccatttacaaaccatggcctccaatcatctacaatggagtagtttagattccttatccatgcttgagtagagatgaaaggaac |
7015437 |
T |
|
| Q |
272 |
aactgcatcatgatctccactgccaacaacacatcaaaaagtctcattgcttcaaaactgaaattaagagtaatttatacaaaccactcgactaacaaag |
371 |
Q |
| |
|
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
7015436 |
aactgcatcgtgatctccactggcaacaacacatcaaaaagtctcattgcttcaaaatggaaattaagagtaatttatacaaaccactcaactaacaaag |
7015337 |
T |
|
| Q |
372 |
gtgtctttcaactaagggtaaaaccgtgagcgcttacacaagacccaaagtgaaaaatacctacggaaaatggtgcaatagacttgagtttcaaccacct |
471 |
Q |
| |
|
| ||||||||||||||||| || ||||||| |||||||||||||||| |||||||||||||| | ||| | |||||||| ||| |||||||| ||||||| |
|
|
| T |
7015336 |
gcgtctttcaactaagggtgaagccgtgagggcttacacaagacccagagtgaaaaatacct-ccgaatacggtgcaatggacatgagtttcgaccacct |
7015238 |
T |
|
| Q |
472 |
tctaaagcaaaattctcactttagacgaacttaatccaagaaaaagactacatagatatggtgacaacacgagtctnnnnnnnnnnnncgctacattaaa |
571 |
Q |
| |
|
||||||||||||| |||||||| || || ||||||||||||||||||||||| | |||||||||||||||||| || |||||||||||| |
|
|
| T |
7015237 |
tctaaagcaaaatgctcacttttgatgagcttaatccaagaaaaagactacaaacatatggtgacaacacgagcctaaaaagaaaaaacgctacattaaa |
7015138 |
T |
|
| Q |
572 |
agataaaatcttcacctgtatatcaaagaacggtatccttttttgcttagatttgcatgaaactcaaagctaccaaatatatcatactcaaaattattca |
671 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
7015137 |
agagaaaatcttcacctgtatatcaaagaacggtatccttttttgcttagatttgcatgaaactcaacgctaccaaatatatcatactcaaaatcattca |
7015038 |
T |
|
| Q |
672 |
tgtaacaacgttcccatttccctatggttccctgcagggatcaaaattatgtacattaatatgatattgat |
742 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
7015037 |
tgtaacaacgttcccatttccctatggttccctgcagtactcaaagctatgtacattaatatgatattgat |
7014967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 438 - 742
Target Start/End: Complemental strand, 6995857 - 6995553
Alignment:
| Q |
438 |
aaaatggtgcaatagacttgagtttcaaccaccttctaaagcaaaattctcactttagacgaacttaatccaagaaaaagactacatagatatggtgaca |
537 |
Q |
| |
|
|||| ||||||||||||||||||| || ||||||||||||||||||| ||||||||||| || |||||||||||||||| |||||||||||||||||||| |
|
|
| T |
6995857 |
aaaacggtgcaatagacttgagttccagccaccttctaaagcaaaatgctcactttagatgagcttaatccaagaaaaacactacatagatatggtgaca |
6995758 |
T |
|
| Q |
538 |
acacgagtctnnnnnnnnnnnncgctacattaaaagataaaatcttcacctgtatatcaaagaacggtatccttttttgcttagatttgcatgaaactca |
637 |
Q |
| |
|
|||||||||| | ||||||||||| | ||||| |||||||||| |||||||| |||||||||||||||||||||||| ||||||||||| |
|
|
| T |
6995757 |
acacgagtctaaaaagaaaaaactctacattaaaatagaaaatattcacctgtaaatcaaagaccggtatccttttttgcttagatttacatgaaactca |
6995658 |
T |
|
| Q |
638 |
aagctaccaaatatatcatactcaaaattattcatgtaacaacgttcccatttccctatggttccctgcagggatcaaaattatgtacattaatatgata |
737 |
Q |
| |
|
|||||||||| || |||| |||||||| ||| ||||||||||||||||||||||||||||||||||| | ||||| ||||||| ||||||||||| |
|
|
| T |
6995657 |
aagctaccaaggatctcattctcaaaatcattagagtaacaacgttcccatttccctatggttccctgcaatgctcaaagctatgtacgttaatatgata |
6995558 |
T |
|
| Q |
738 |
ttgat |
742 |
Q |
| |
|
||||| |
|
|
| T |
6995557 |
ttgat |
6995553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 27 - 308
Target Start/End: Complemental strand, 7058170 - 7057889
Alignment:
| Q |
27 |
ctggttcgattgtgattcaatccaattaaatgggactatgatacaactggaatctagccaactggcggattggttggtgttcggttcaaccagttgtact |
126 |
Q |
| |
|
|||||||||||||| |||| |||| || ||||||||||||||| |||||||||| ||||| |||||| || | || ||||||||||| |||| || |
|
|
| T |
7058170 |
ctggttcgattgtggttcagtccagttcaatgggactatgataaaactggaatcaagccagctggcgaatatgctgactttcggttcaactggttgaacc |
7058071 |
T |
|
| Q |
127 |
caccagttcgatccaatatttaaaacattgataagacgttttaatcttaccctcccacttggtcttttacaaaccatggcctccaatcatctacaatgga |
226 |
Q |
| |
|
|| |||| ||| ||| ||||||||||||||| || | || | ||||||||||||||||| | ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
7058070 |
ggcctgttcaatctaatttttaaaacattgatatgaaggttgatgcttaccctcccacttggccatttacaaaccatgacctccaatcatctacaatgga |
7057971 |
T |
|
| Q |
227 |
gtagtttagatcccttatccatgcttgagtagagatgaaaggaacaactgcatcatgatctccactgccaacaacacatcaa |
308 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| || |||||||||| |
|
|
| T |
7057970 |
gtagtttagatcccttatccatgcttgagtagagatgaaaggaacaactacatcatgatccccactgcaaaaaacacatcaa |
7057889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 21 - 308
Target Start/End: Complemental strand, 7042163 - 7041872
Alignment:
| Q |
21 |
ttcaacctggttcgattgtgattcaatccaattaaatgggactatgatacaactggaatctagccaactggcggattggttggtgttcggttcaaccagt |
120 |
Q |
| |
|
|||||| ||||||| |||||||||| |||| || || |||||||||| | |||||||| |||||| ||||| ||||| || ||||||||||||||| |
|
|
| T |
7042163 |
ttcaacttggttcggttgtgattcattccagttcaacaggactatgattaatctggaatcaagccaattggcgaattggcaggctttcggttcaaccagt |
7042064 |
T |
|
| Q |
121 |
tgtactcac----cagttcgatccaatatttaaaacattgataagacgttttaatcttaccctcccacttggtcttttacaaaccatggcctccaatcat |
216 |
Q |
| |
|
|| || || |||||| || ||| || |||||||||||| || |||| | ||||||||||||||||| | |||||||||||||||||||| |||| |
|
|
| T |
7042063 |
tgaaccgacggaccagttcaatttaattttcaaaacattgatatgaagtttcatacttaccctcccacttggccatttacaaaccatggcctccagtcat |
7041964 |
T |
|
| Q |
217 |
ctacaatggagtagtttagatcccttatccatgcttgagtagagatgaaaggaacaactgcatcatgatctccactgccaacaacacatcaa |
308 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| || |||||||||| |
|
|
| T |
7041963 |
ctacaatggagtagtttagatcccttatccaagcttgagtagacatgaaaggaacaactgcatcatgatccccactgcaaaaaacacatcaa |
7041872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 172 - 308
Target Start/End: Complemental strand, 6996622 - 6996486
Alignment:
| Q |
172 |
cttaccctcccacttggtcttttacaaaccatggcctccaatcatctacaatggagtagtttagatcccttatccatgcttgagtagagatgaaaggaac |
271 |
Q |
| |
|
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |
|
|
| T |
6996622 |
cttaccctcccacttgaccgtttacaaaccatggcctccaatcatctacaatggagtagtttagattccttatccaagcttgagtagacatgaaaggaac |
6996523 |
T |
|
| Q |
272 |
aactgcatcatgatctccactgccaacaacacatcaa |
308 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6996522 |
aactgcatcatgatctccactgccaacaacacatcaa |
6996486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 21 - 308
Target Start/End: Complemental strand, 7049259 - 7048972
Alignment:
| Q |
21 |
ttcaacctggttcgattgtgattcaatccaattaaatgggactatgatacaactggaatctagccaactggcggattggttggtgttcggttcaaccagt |
120 |
Q |
| |
|
|||||||| ||||||||||| |||| |||| || || |||||||||||| |||||||||| |||||||||||| || | || ||||||||||| || |
|
|
| T |
7049259 |
ttcaacctagttcgattgtggttcagtccagttcaacgggactatgataaaactggaatcaagccaactggcgaatatgctgactttcggttcaactggt |
7049160 |
T |
|
| Q |
121 |
tgtactcaccagttcgatccaatatttaaaacattgataagacgttttaatcttaccctcccacttggtcttttacaaaccatggcctccaatcatctac |
220 |
Q |
| |
|
|| || |||||||| ||| ||| ||||||||||||||| || | || | |||||||| |||||||| | |||||| |||||| ||||||||| |||| |
|
|
| T |
7049159 |
tgaaccgaccagttcaatctaatttttaaaacattgatatgaaggttgatgcttaccctgccacttggccatttacataccatgacctccaatcctctat |
7049060 |
T |
|
| Q |
221 |
aatggagtagtttagatcccttatccatgcttgagtagagatgaaaggaacaactgcatcatgatctccactgccaacaacacatcaa |
308 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||| |||| ||||||| || |||||||||| |
|
|
| T |
7049059 |
aatggagtagtttagatcccttatccatgcttgagtagaccggaaaggaacaattaaatcaagatccccactgcaaaaaacacatcaa |
7048972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 172 - 297
Target Start/End: Complemental strand, 7022282 - 7022157
Alignment:
| Q |
172 |
cttaccctcccacttggtcttttacaaaccatggcctccaatcatctacaatggagtagtttagatcccttatccatgcttgagtagagatgaaaggaac |
271 |
Q |
| |
|
|||||||||||||||| | |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
7022282 |
cttaccctcccacttgaccatttacaaaccatggcctccaatcatctacagtggagtaatttagatcccttatccatgcttgagtagacatgaaaggaac |
7022183 |
T |
|
| Q |
272 |
aactgcatcatgatctccactgccaa |
297 |
Q |
| |
|
|| ||||||| || | |||||||||| |
|
|
| T |
7022182 |
aattgcatcaagaaccccactgccaa |
7022157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 562 - 742
Target Start/End: Complemental strand, 7041219 - 7041038
Alignment:
| Q |
562 |
ctacatta-aaagataaaatcttcacctgtatatcaaagaacggtatccttttttgcttagatttgcatgaaactcaaagctaccaaatatatcatactc |
660 |
Q |
| |
|
|||||||| ||||| ||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| ||| || ||| ||| |
|
|
| T |
7041219 |
ctacattataaagagaaaatattcacctgtatatcaaagagcgatatccttttttgcttagatttgcatgaaactcaacgctactaaagatctcacgctc |
7041120 |
T |
|
| Q |
661 |
aaaattattcatgtaacaacgttcccatttccctatggttccctgcagggatcaaaattatgtacattaatatgatattgat |
742 |
Q |
| |
|
||||| | | ||||||| |||||||||||||||||| ||||||| | || ||||| ||||||||| |||||||||||||| |
|
|
| T |
7041119 |
aaaatcagtagtgtaacatcgttcccatttccctatgcttccctgtatggctcaaagatatgtacatcaatatgatattgat |
7041038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 576 - 742
Target Start/End: Complemental strand, 7028756 - 7028591
Alignment:
| Q |
576 |
aaaatcttcacctgtatatcaaagaacggtatccttttttgcttagatttgcatgaaactcaaagctaccaaatatatcatactcaaaattattcatgta |
675 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||| ||| || ||| |||||||| | | |||| |
|
|
| T |
7028756 |
aaaatcttcacctgtatatcaaagagcggtatccttttttgcttagattcacatgaaactcaacgctactaaagatctcacgctcaaaatcagtagtgta |
7028657 |
T |
|
| Q |
676 |
acaacgttcccatttccctatggttccctgcagggatcaaaattatgtacattaatatgatattgat |
742 |
Q |
| |
|
||| |||||||||||||||||| ||||||| |||| || || |||||||||||||||||||||||| |
|
|
| T |
7028656 |
acatcgttcccatttccctatgcttccctgtagggctc-aatctatgtacattaatatgatattgat |
7028591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 172 - 308
Target Start/End: Complemental strand, 7029016 - 7028880
Alignment:
| Q |
172 |
cttaccctcccacttggtcttttacaaaccatggcctccaatcatctacaatggagtagtttagatcccttatccatgcttgagtagagatgaaaggaac |
271 |
Q |
| |
|
|||||||| ||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
7029016 |
cttaccctgccacttgaccatttacaaaccatgacctccaatcatctacaatggagtagtttagatcccttatccatgcttgagtagactggaaaggaac |
7028917 |
T |
|
| Q |
272 |
aactgcatcatgatctccactgccaacaacacatcaa |
308 |
Q |
| |
|
|||| |||| |||| ||||||| || |||||||||| |
|
|
| T |
7028916 |
aactaaatcaagatccccactgcaaaaaacacatcaa |
7028880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 562 - 728
Target Start/End: Complemental strand, 7057177 - 7057010
Alignment:
| Q |
562 |
ctacatta-aaagataaaatcttcacctgtatatcaaagaacggtatccttttttgcttagatttgcatgaaactcaaagctaccaaatatatcatactc |
660 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||| || ||| ||| |
|
|
| T |
7057177 |
ctacattagaaagagaaaatcttcacctgtatatcaaagagcggtatccttttttgcttagatttgcatgaaactcaacgctactaaaaatctcacgctc |
7057078 |
T |
|
| Q |
661 |
aaaattattcatgtaacaacgttcccatttccctatggttccctgcagggatcaaaattatgtacatt |
728 |
Q |
| |
|
||||| | | |||||| ||||||||||| |||||||| ||||||| |||| ||| |||||||||| |
|
|
| T |
7057077 |
aaaatcagtacggtaacatcgttcccattttcctatggtaccctgcatggattaaagctatgtacatt |
7057010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 562 - 716
Target Start/End: Complemental strand, 7048338 - 7048183
Alignment:
| Q |
562 |
ctacatta-aaagataaaatcttcacctgtatatcaaagaacggtatccttttttgcttagatttgcatgaaactcaaagctaccaaatatatcatactc |
660 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||| ||| || ||| || |
|
|
| T |
7048338 |
ctacattagaaagagaaaatcttcacctgtatatcaaagagcggtatccttttttgcttagatttgcatgaaactcaacggtactaaagatctcacgctt |
7048239 |
T |
|
| Q |
661 |
aaaattattcatgtaacaacgttcccatttccctatggttccctgcagggatcaaa |
716 |
Q |
| |
|
||||| | | ||||||| ||||||||| | |||||||| ||||||| |||||||| |
|
|
| T |
7048238 |
aaaatcagtagtgtaacatcgttcccatgttcctatggtaccctgcatggatcaaa |
7048183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 570 - 704
Target Start/End: Complemental strand, 7022025 - 7021891
Alignment:
| Q |
570 |
aaagataaaatcttcacctgtatatcaaagaacggtatccttttttgcttagatttgcatgaaactcaaagctaccaaatatatcatactcaaaattatt |
669 |
Q |
| |
|
||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| | ||| || || | |||||||| | | |
|
|
| T |
7022025 |
aaagagaaaaacttcacctgtatatcaaagagcggtatccttttttgcttagatttgcatgaaactcaacgctgctaaagatctccttctcaaaatcagt |
7021926 |
T |
|
| Q |
670 |
catgtaacaacgttcccatttccctatggttccct |
704 |
Q |
| |
|
|||||||||| | |||||| |||| |||||||| |
|
|
| T |
7021925 |
attgtaacaacgataccattttcctacggttccct |
7021891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 316 - 410
Target Start/End: Complemental strand, 6995966 - 6995868
Alignment:
| Q |
316 |
cattgcttcaaaactgaaattaagagtaatttatacaaac----cactcgactaacaaaggtgtctttcaactaagggtaaaaccgtgagcgcttacac |
410 |
Q |
| |
|
||||||||| ||| | |||||||||||||||||||||||| ||||| |||||| |||| |||||||||||| || |||||| || |||||||| |
|
|
| T |
6995966 |
cattgcttcgaaattaaaattaagagtaatttatacaaaccacgcactcaactaaccaaggcatctttcaactaatggcgaaaccgcaagggcttacac |
6995868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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