View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6340_low_38 (Length: 202)
Name: NF6340_low_38
Description: NF6340
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6340_low_38 |
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Alignment Details
Target: chr8 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 6 - 188
Target Start/End: Original strand, 39305822 - 39306004
Alignment:
| Q |
6 |
gggatcagccctatgcttcctttgtgtaaactcgaaaaattgtttccaagtgaaatcaggatatttcattggctcttgtcttcccagtatattttcaggt |
105 |
Q |
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| T |
39305822 |
gggatcagccctatgcttcctttgtgtaaactcgaaaaattgtttccaagtgaaatcaggatatttcgttggctcttgtcttcccagtatattttcaggt |
39305921 |
T |
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| Q |
106 |
gctctcacaattttgtctccttttggacacaaaaagaaagcaagagtctttctatccttctccttattagccaataccctatg |
188 |
Q |
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| T |
39305922 |
gctctcacaattttgtctccttttggacacaaaaagaaagcaagagtctttctatccttctccctattagccaataccctatg |
39306004 |
T |
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