View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6341_low_15 (Length: 291)

Name: NF6341_low_15
Description: NF6341
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6341_low_15
NF6341_low_15
[»] chr8 (38 HSPs)
chr8 (3-252)||(9623387-9623636)
chr8 (4-137)||(6199017-6199150)
chr8 (3-137)||(24473688-24473822)
chr8 (3-137)||(37396708-37396842)
chr8 (5-140)||(37397067-37397202)
chr8 (5-137)||(17431287-17431419)
chr8 (8-140)||(24473340-24473472)
chr8 (3-139)||(34498120-34498255)
chr8 (6-137)||(20861561-20861692)
chr8 (2-137)||(41662521-41662656)
chr8 (5-115)||(33727027-33727137)
chr8 (3-137)||(34498475-34498609)
chr8 (5-137)||(6198658-6198790)
chr8 (5-134)||(15444569-15444698)
chr8 (3-140)||(16169527-16169664)
chr8 (8-134)||(25439052-25439176)
chr8 (3-135)||(15444213-15444345)
chr8 (5-140)||(16169171-16169305)
chr8 (14-137)||(2856526-2856650)
chr8 (3-68)||(33726734-33726799)
chr8 (31-146)||(39723996-39724111)
chr8 (31-109)||(39723430-39723508)
chr8 (31-109)||(9823309-9823387)
chr8 (31-109)||(13027229-13027307)
chr8 (20-135)||(15442765-15442880)
chr8 (73-140)||(25438789-25438856)
chr8 (31-109)||(3307366-3307444)
chr8 (31-109)||(13026663-13026741)
chr8 (39-105)||(13936754-13936820)
chr8 (31-145)||(22851382-22851496)
chr8 (31-104)||(9822781-9822854)
chr8 (31-109)||(6092803-6092881)
chr8 (21-134)||(15042148-15042261)
chr8 (75-135)||(33726696-33726756)
chr8 (67-138)||(9623864-9623936)
chr8 (59-137)||(13937365-13937443)
chr8 (30-139)||(41662349-41662459)
chr8 (21-109)||(15043721-15043809)
[»] chr4 (43 HSPs)
chr4 (2-145)||(32703569-32703712)
chr4 (3-139)||(4239286-4239422)
chr4 (2-137)||(28196692-28196827)
chr4 (5-137)||(9380663-9380795)
chr4 (5-136)||(25161879-25162010)
chr4 (2-137)||(28196346-28196481)
chr4 (3-137)||(292782-292916)
chr4 (3-137)||(39744385-39744519)
chr4 (2-140)||(169358-169496)
chr4 (2-137)||(169013-169149)
chr4 (5-137)||(293139-293271)
chr4 (9-137)||(9380307-9380435)
chr4 (2-138)||(23540171-23540307)
chr4 (2-137)||(32703225-32703360)
chr4 (3-137)||(9023244-9023378)
chr4 (6-136)||(43292038-43292168)
chr4 (2-138)||(39086542-39086678)
chr4 (5-137)||(39744030-39744162)
chr4 (8-137)||(9023605-9023734)
chr4 (3-139)||(43292279-43292413)
chr4 (3-114)||(25162233-25162344)
chr4 (2-137)||(48405962-48406096)
chr4 (2-114)||(23539862-23539974)
chr4 (2-114)||(26207383-26207495)
chr4 (6-114)||(48406308-48406416)
chr4 (3-114)||(12757789-12757900)
chr4 (2-137)||(26207665-26207800)
chr4 (6-134)||(12758127-12758254)
chr4 (8-114)||(44468849-44468954)
chr4 (3-140)||(39912407-39912543)
chr4 (8-137)||(39912054-39912181)
chr4 (39-109)||(36095845-36095915)
chr4 (31-109)||(50678807-50678885)
chr4 (31-139)||(50679372-50679480)
chr4 (31-109)||(36096423-36096501)
chr4 (31-134)||(43050610-43050713)
chr4 (31-109)||(43051200-43051278)
chr4 (35-137)||(56505693-56505795)
chr4 (83-139)||(11241387-11241443)
chr4 (29-139)||(16555762-16555873)
chr4 (39-109)||(45830152-45830222)
chr4 (31-137)||(56506522-56506628)
chr4 (59-136)||(11529169-11529246)
[»] scaffold0460 (2 HSPs)
scaffold0460 (3-137)||(330-464)
scaffold0460 (3-140)||(685-819)
[»] chr7 (36 HSPs)
chr7 (2-140)||(37888830-37888968)
chr7 (2-137)||(10533034-10533169)
chr7 (2-137)||(37889178-37889313)
chr7 (3-137)||(20419244-20419378)
chr7 (3-137)||(37972316-37972450)
chr7 (5-137)||(22740156-22740288)
chr7 (2-137)||(17156967-17157102)
chr7 (3-134)||(18863970-18864101)
chr7 (2-137)||(29292922-29293057)
chr7 (5-134)||(20418891-20419020)
chr7 (2-137)||(3205012-3205147)
chr7 (2-137)||(13744152-13744286)
chr7 (3-114)||(18864322-18864433)
chr7 (9-139)||(36527724-36527854)
chr7 (2-139)||(3204667-3204802)
chr7 (3-137)||(42418591-42418725)
chr7 (2-138)||(9035211-9035348)
chr7 (2-137)||(9034867-9035003)
chr7 (3-139)||(13741555-13741690)
chr7 (5-137)||(37971960-37972092)
chr7 (2-138)||(48359319-48359453)
chr7 (2-140)||(29293265-29293403)
chr7 (5-114)||(42418950-42419060)
chr7 (2-137)||(38826832-38826967)
chr7 (3-114)||(22740512-22740622)
chr7 (25-133)||(48359600-48359707)
chr7 (2-134)||(36527387-36527518)
chr7 (73-137)||(16198967-16199031)
chr7 (31-140)||(44599486-44599595)
chr7 (31-109)||(44600083-44600161)
chr7 (31-137)||(8643714-8643820)
chr7 (31-109)||(13863341-13863419)
chr7 (31-109)||(13863905-13863982)
chr7 (60-137)||(46816288-46816365)
chr7 (87-139)||(3687660-3687712)
chr7 (81-136)||(18925320-18925373)
[»] chr2 (32 HSPs)
chr2 (2-141)||(26692739-26692878)
chr2 (7-140)||(7664597-7664730)
chr2 (3-134)||(8851151-8851282)
chr2 (3-137)||(8851503-8851636)
chr2 (2-114)||(19141768-19141880)
chr2 (3-137)||(17851323-17851456)
chr2 (6-134)||(5793450-5793578)
chr2 (3-138)||(16910826-16910961)
chr2 (5-114)||(6324940-6325049)
chr2 (5-114)||(16911191-16911300)
chr2 (5-145)||(17850970-17851109)
chr2 (7-137)||(7664248-7664378)
chr2 (3-115)||(7979587-7979699)
chr2 (2-134)||(26692399-26692531)
chr2 (8-137)||(7979928-7980056)
chr2 (3-135)||(6325267-6325399)
chr2 (2-137)||(41790831-41790966)
chr2 (2-114)||(41790513-41790625)
chr2 (39-137)||(37720204-37720301)
chr2 (14-137)||(5379890-5380013)
chr2 (2-139)||(18749724-18749859)
chr2 (21-137)||(5378661-5378777)
chr2 (33-135)||(19141446-19141547)
chr2 (2-114)||(18750059-18750157)
chr2 (31-138)||(38490789-38490895)
chr2 (31-109)||(2638848-2638926)
chr2 (31-109)||(18296104-18296182)
chr2 (31-109)||(2639430-2639508)
chr2 (31-109)||(7591229-7591307)
chr2 (31-109)||(26841615-26841693)
chr2 (31-109)||(26842186-26842264)
chr2 (31-109)||(7591798-7591876)
[»] chr1 (59 HSPs)
chr1 (5-140)||(48105038-48105173)
chr1 (7-140)||(26814691-26814824)
chr1 (2-145)||(49318085-49318227)
chr1 (2-140)||(9347123-9347261)
chr1 (3-137)||(32162963-32163097)
chr1 (2-135)||(50526391-50526524)
chr1 (5-137)||(6703460-6703592)
chr1 (8-148)||(13918435-13918575)
chr1 (5-137)||(28633720-28633852)
chr1 (2-138)||(49317751-49317886)
chr1 (3-139)||(50430001-50430137)
chr1 (2-137)||(999444-999578)
chr1 (3-134)||(48104681-48104812)
chr1 (3-137)||(20480168-20480301)
chr1 (2-140)||(50615540-50615677)
chr1 (2-140)||(50623368-50623505)
chr1 (4-137)||(46824199-46824332)
chr1 (2-137)||(4692352-4692487)
chr1 (3-134)||(28634077-28634208)
chr1 (3-140)||(21687022-21687159)
chr1 (8-145)||(27172108-27172244)
chr1 (2-134)||(42611188-42611320)
chr1 (5-136)||(13918789-13918920)
chr1 (3-134)||(46823846-46823977)
chr1 (3-139)||(6703814-6703950)
chr1 (2-114)||(9347470-9347582)
chr1 (5-137)||(27172464-27172595)
chr1 (3-140)||(20371272-20371409)
chr1 (7-137)||(26815043-26815173)
chr1 (3-145)||(47498293-47498433)
chr1 (2-140)||(49318364-49318499)
chr1 (8-114)||(999134-999239)
chr1 (3-143)||(20480534-20480671)
chr1 (2-139)||(42611533-42611670)
chr1 (3-114)||(20371061-20371171)
chr1 (2-137)||(44911025-44911160)
chr1 (2-137)||(50429656-50429790)
chr1 (3-112)||(44224039-44224148)
chr1 (2-114)||(21687386-21687498)
chr1 (2-134)||(44911356-44911488)
chr1 (2-114)||(50949484-50949596)
chr1 (2-137)||(4692022-4692155)
chr1 (3-132)||(32162734-32162857)
chr1 (25-137)||(19008692-19008804)
chr1 (20-137)||(39691937-39692054)
chr1 (5-76)||(44223745-44223815)
chr1 (31-109)||(49284437-49284515)
chr1 (31-145)||(6002229-6002343)
chr1 (31-109)||(49285003-49285081)
chr1 (31-104)||(6002842-6002915)
chr1 (29-92)||(6712215-6712279)
chr1 (21-68)||(19007774-19007821)
chr1 (61-114)||(50949184-50949237)
chr1 (83-138)||(41082908-41082963)
chr1 (2-45)||(50615289-50615332)
chr1 (2-45)||(50623117-50623160)
chr1 (88-137)||(50615240-50615289)
chr1 (88-137)||(50623068-50623117)
chr1 (81-137)||(8108991-8109047)
[»] chr3 (35 HSPs)
chr3 (5-146)||(10348721-10348862)
chr3 (8-137)||(48159897-48160026)
chr3 (5-140)||(27238822-27238957)
chr3 (3-137)||(40848881-40849015)
chr3 (3-135)||(22429516-22429647)
chr3 (5-137)||(40848521-40848652)
chr3 (2-138)||(47666254-47666390)
chr3 (8-140)||(48160258-48160390)
chr3 (2-144)||(3353121-3353260)
chr3 (3-114)||(24485044-24485155)
chr3 (3-114)||(27238488-27238599)
chr3 (3-114)||(36180577-36180688)
chr3 (3-138)||(42672977-42673111)
chr3 (10-137)||(53687888-53688015)
chr3 (3-145)||(24485381-24485521)
chr3 (2-114)||(3353471-3353582)
chr3 (8-140)||(42673221-42673352)
chr3 (5-148)||(26007541-26007686)
chr3 (3-136)||(22429159-22429292)
chr3 (5-142)||(36180912-36181049)
chr3 (3-140)||(44007964-44008101)
chr3 (3-140)||(53766160-53766296)
chr3 (3-114)||(26007204-26007315)
chr3 (3-140)||(53688223-53688359)
chr3 (3-136)||(10348480-10348613)
chr3 (8-105)||(42456121-42456217)
chr3 (5-140)||(44008323-44008457)
chr3 (2-148)||(47665900-47666046)
chr3 (20-139)||(8314011-8314130)
chr3 (2-138)||(21896432-21896565)
chr3 (35-109)||(1928386-1928460)
chr3 (3-137)||(53766511-53766633)
chr3 (3-54)||(42455852-42455903)
chr3 (74-137)||(42455790-42455853)
chr3 (87-140)||(20969023-20969076)
[»] scaffold0017 (2 HSPs)
scaffold0017 (6-139)||(185197-185330)
scaffold0017 (5-136)||(184840-184971)
[»] chr5 (38 HSPs)
chr5 (2-137)||(12498847-12498982)
chr5 (3-137)||(26571084-26571218)
chr5 (3-114)||(19514549-19514660)
chr5 (5-134)||(21207229-21207358)
chr5 (2-134)||(2817152-2817283)
chr5 (2-137)||(12498567-12498701)
chr5 (8-137)||(34147435-34147564)
chr5 (2-134)||(3888581-3888713)
chr5 (2-137)||(34147141-34147274)
chr5 (5-137)||(43464114-43464245)
chr5 (2-139)||(3888237-3888373)
chr5 (3-136)||(22729360-22729492)
chr5 (5-142)||(26570724-26570861)
chr5 (5-137)||(19514885-19515017)
chr5 (2-114)||(41072133-41072245)
chr5 (3-134)||(10098861-10098991)
chr5 (5-134)||(11316896-11317025)
chr5 (8-140)||(30401879-30402010)
chr5 (5-139)||(22729006-22729138)
chr5 (3-140)||(37780664-37780799)
chr5 (29-134)||(43463759-43463863)
chr5 (21-137)||(25940521-25940637)
chr5 (8-114)||(37610544-37610649)
chr5 (26-145)||(25940956-25941076)
chr5 (43-137)||(37780320-37780413)
chr5 (2-140)||(2817495-2817631)
chr5 (43-137)||(37610202-37610295)
chr5 (54-139)||(10098517-10098602)
chr5 (3-73)||(25940885-25940955)
chr5 (42-114)||(11316737-11316809)
chr5 (31-139)||(18817559-18817667)
chr5 (20-137)||(42919305-42919421)
chr5 (31-109)||(18816980-18817058)
chr5 (61-109)||(11351405-11351453)
chr5 (31-109)||(11350836-11350913)
chr5 (3-40)||(10098602-10098639)
chr5 (85-137)||(16466744-16466796)
chr5 (81-137)||(26020450-26020506)
[»] chr6 (19 HSPs)
chr6 (3-138)||(33974219-33974354)
chr6 (3-140)||(32733916-32734053)
chr6 (2-137)||(7654467-7654602)
chr6 (3-138)||(10087779-10087913)
chr6 (3-136)||(22755010-22755142)
chr6 (5-145)||(22684280-22684419)
chr6 (5-145)||(22754649-22754788)
chr6 (2-140)||(2354406-2354543)
chr6 (3-140)||(13176617-13176753)
chr6 (2-114)||(29074291-29074403)
chr6 (2-114)||(29079055-29079167)
chr6 (2-114)||(29106864-29106976)
chr6 (3-114)||(32733580-32733691)
chr6 (2-114)||(2354730-2354841)
chr6 (11-114)||(13176984-13177087)
chr6 (31-140)||(33828987-33829096)
chr6 (8-114)||(33973887-33973991)
chr6 (31-109)||(33829584-33829662)
chr6 (87-145)||(18242160-18242218)
[»] scaffold0041 (2 HSPs)
scaffold0041 (3-137)||(38615-38749)
scaffold0041 (3-104)||(38284-38385)
[»] scaffold0029 (3 HSPs)
scaffold0029 (3-137)||(9905-10040)
scaffold0029 (3-67)||(10268-10332)
scaffold0029 (75-142)||(10311-10376)
[»] scaffold0069 (2 HSPs)
scaffold0069 (3-140)||(50426-50563)
scaffold0069 (3-114)||(50096-50206)
[»] scaffold0176 (2 HSPs)
scaffold0176 (5-137)||(19621-19752)
scaffold0176 (3-137)||(19964-20097)
[»] scaffold0328 (2 HSPs)
scaffold0328 (31-109)||(6743-6821)
scaffold0328 (31-139)||(6150-6258)
[»] scaffold0001 (1 HSPs)
scaffold0001 (83-137)||(439199-439253)
[»] scaffold0802 (1 HSPs)
scaffold0802 (87-139)||(1424-1476)


Alignment Details
Target: chr8 (Bit Score: 234; Significance: 1e-129; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 3 - 252
Target Start/End: Complemental strand, 9623636 - 9623387
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  9623636 atcagcactaaatgtcaaggggaccataaaatcagaaaaagggaaaactatagggggcaaaattgctcgtttaaaactatggggtgcaaaatcgcacaat 9623537  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagccaaataaaatatgtttgcagtacatgttaagatttgctagcctggtttatatgatgaaggttttga 202  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9623536 tggcaaactatagtgagaaaaagtgcaattaagccaaataaaatatgtttgcagtacatgttaagatttgctagcctggtttatatgatgaaggttttga 9623437  T
Q  203 attcgggtacgtcttgttcttcgaatcttgtactttgagtatgcagtttt 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9623436 attcgggtacgtcttgttcttcgaatcttgtactttgagtatgcagtttt 9623387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 6199017 - 6199150
Alignment:
Q  4 tcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaatt 103  Q
    |||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6199017 tcagcactaaatgtcatggggatcataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaatt 6199116  T
Q  104 ggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||||||  ||  |||||||||||||||||    
T  6199117 ggcaaactatagggaagaaaagtgcaattaagcc 6199150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 24473688 - 24473822
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  24473688 atcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 24473787  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||||||  ||  |||||||||||||||||    
T  24473788 tggcaaactatagggatgaaaagtgcaattaagcc 24473822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 37396842 - 37396708
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37396842 atcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 37396743  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcc 137  Q
     |||||||||||  | | |||||||||||||||||    
T  37396742 cggcaaactataggggggaaaagtgcaattaagcc 37396708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 37397067 - 37397202
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||  |||||||||||||||||    
T  37397067 cagcactaaatgtcatggggaccataaaatcagaaagggggaaatctatagggggcaaagtcgctcgtttaaaactatggggggcaaaatcgcacaattg 37397166  T
Q  105 gcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    ||||||||||  | | ||||||||||||||||||||    
T  37397167 gcaaactataggggggaaaagtgcaattaagccaaa 37397202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 17431419 - 17431287
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||    
T  17431419 cagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgaaaaatcgcacaattg 17431320  T
Q  105 gcaaactataatgagaaaaagtgcaattaagcc 137  Q
     |||||||||  | | |||||||||||||||||    
T  17431319 acaaactatatgggggaaaagtgcaattaagcc 17431287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 24473472 - 24473340
Alignment:
Q  8 cactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggca 107  Q
    |||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||| |||||| ||||||||| |||||||||||    
T  24473472 cactaaatgtcatggggaccataaaatcagaaaggggggaaactatagggggcaaaatcgctcatttaaaattatggggtgcaaaatcacacaattggca 24473373  T
Q  108 aactataatgagaaaaagtgcaattaagccaaa 140  Q
    |||||||  | ||||||||||||||||||||||    
T  24473372 aactatagggggaaaaagtgcaattaagccaaa 24473340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 34498255 - 34498120
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  34498255 atcagcactaaatgtcatggggaccataaaatcagaaagggggaaa-ctatagggtgcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 34498157  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagccaa 139  Q
    || |||||||||  | |||||||||||||||| ||||    
T  34498156 tgacaaactatagggggaaaaagtgcaattaaaccaa 34498120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 20861561 - 20861692
Alignment:
Q  6 agcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgg 105  Q
    |||||||||||||| |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  20861561 agcactaaatgtcatggggaccataaaatcagaaagggggaaaattataggaggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgg 20861660  T
Q  106 caaactataatgagaaaaagtgcaattaagcc 137  Q
    || ||||||  | |||||| ||||||||||||    
T  20861661 cagactatagggggaaaaaatgcaattaagcc 20861692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 41662656 - 41662521
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| ||| |||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  41662656 catcagcactaaatgtcatgggaaccataaaattagaaagggagaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaa 41662557  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||||||||  | | |||||||||||||||||    
T  41662556 ttggcaaactatatgggggaaaagtgcaattaagcc 41662521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 33727027 - 33727137
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||     
T  33727027 cagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaatta 33727126  T
Q  105 gcaaactataa 115  Q
    |||||||||||    
T  33727127 gcaaactataa 33727137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 34498475 - 34498609
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| |||| || ||||||||||||||| ||||||||||||||||    
T  34498475 atcagcactaaatgtcatggggaccataaaatcagaaagggggaaaaatatagggggcataatctcttgtttaaaactatggggtgcaaaatcgcacaat 34498574  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    | ||||||||||  | | |||||||||||||||||    
T  34498575 ttgcaaactataggggggaaaagtgcaattaagcc 34498609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 6198790 - 6198658
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  6198790 cagcactaaatgtcatggggaccataaaatcagaaatggggaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattg 6198691  T
Q  105 gcaaactataatgaga-aaaagtgcaattaagcc 137  Q
    | | || || ||| || |||||||||||||||||    
T  6198690 gaagaccat-atgggagaaaagtgcaattaagcc 6198658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 15444569 - 15444698
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||    
T  15444569 cagcactaaatgtcatggggaccataaaatcagaaagagggaaaactataggggataaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattg 15444668  T
Q  105 gcaaactataatgagaaaaagtgcaattaa 134  Q
    | ||| ||||  | ||||||||||||||||    
T  15444669 gtaaattatagggggaaaaagtgcaattaa 15444698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 16169527 - 16169664
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| ||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||  |||||||| | |||||||    
T  16169527 atcagcactaaatgtcatgggaaccataaaatcagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactataagatgcaaatttgcacaat 16169626  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    ||  ||||||||  ||| ||||||||||||||||||||    
T  16169627 tgaaaaactatagggaggaaaagtgcaattaagccaaa 16169664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 25439052 - 25439176
Alignment:
Q  8 cactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggca 107  Q
    |||||||||||| |||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  25439052 cactaaatgtcatggggaccataaaatca-aaaagggggaaactatagagggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgaca 25439150  T
Q  108 aactataatgagaaaaagtgcaattaa 134  Q
    |||||| | | ||||||||||||||||    
T  25439151 aactat-aggggaaaaagtgcaattaa 25439176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 15444345 - 15444213
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| || ||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||| ||| ||||| | |||||    
T  15444345 atcagcactaaatgtcatggagaccataaaatcataaagggggaaaactatagggagcaaaatcgctcgtttaaaactatggaatgtaaaattgtacaat 15444246  T
Q  103 tggcaaactataatgagaaaaagtgcaattaag 135  Q
    ||||||||||||  | | |||| ||||||||||    
T  15444245 tggcaaactatagaggggaaaaatgcaattaag 15444213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 16169305 - 16169171
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||| ||||||||| | |||||||||||||||||| || ||||||||||||||| ||||| ||||||||||||||||| | |||||||| |||||||||    
T  16169305 cagcattaaatgtcacgaggaccataaaatcagaaagggagaaaactatagggggaaaaattgctcgtttaaaactatgaggtgcaaaattgcacaattg 16169206  T
Q  105 gcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    ||||||||| | ||  ||||||||||||||||||||    
T  16169205 gcaaactat-aggatgaaaagtgcaattaagccaaa 16169171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 137
Target Start/End: Complemental strand, 2856650 - 2856526
Alignment:
Q  14 atgtcaaggg-gaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaacta 112  Q
    |||||||||| |||||  |||||||||| |||||||||||||||||  |||||||  ||||| |||||||||| ||||||||||||||||||||||||||    
T  2856650 atgtcaagggcgaccaataaatcagaaagggggaaaactataggggataaaatcgaacgttttaaactatggggtgcaaaatcgcacaattggcaaacta 2856551  T
Q  113 taatgagaaaaagtgcaattaagcc 137  Q
    ||  ||| |||| | ||||||||||    
T  2856550 tagggaggaaaattacaattaagcc 2856526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 33726799 - 33726734
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgc 68  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||    
T  33726799 atcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggaggcaaaatcgc 33726734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 39723996 - 39724111
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaa 130  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||  |||  |   ||||||||||    
T  39723996 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 39724095  T
Q  131 ttaagccaaataaaat 146  Q
    |||||||||| |||||    
T  39724096 ttaagccaaaaaaaat 39724111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 39723508 - 39723430
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  39723508 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatgggatgcaaaatcgcacaattggcaaa 39723430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 9823309 - 9823387
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  9823309 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 9823387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 13027229 - 13027307
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  13027229 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 13027307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 15442880 - 15442765
Alignment:
Q  20 aggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgag 119  Q
    ||||||||||||||||| |||  |||||||  |||||| |||||||||| |||||||||  ||||| ||||||||| |||||||||| || ||||  | |    
T  15442880 aggggaccataaaatcacaaagcgggaaaaggatagggtgcaaaatcgcacgtttaaaaacatggggtgcaaaatcacacaattggcgaaatataggggg 15442781  T
Q  120 aaaaagtgcaattaag 135  Q
     |||| ||||||||||    
T  15442780 gaaaaatgcaattaag 15442765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 25438856 - 25438789
Alignment:
Q  73 ttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    ||||||||||||| ||||||||||||||||||||||||||||  | | ||||||||||||||| ||||    
T  25438856 ttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagtcaaa 25438789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 3307444 - 3307366
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| || |||||  || ||| ||||||||||| |||||||| ||||||||||||||||||||||||| ||||    
T  3307444 aaatcagaaagggagaaaaagatggggtgcaaaatcgcttgtttaaaaatatgggatgcaaaatcgcacaattgacaaa 3307366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 13026741 - 13026663
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||| | |||||||||||||||||||||||    
T  13026741 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatgaggtgcaaaatcgcacaattggcaaa 13026663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 13936820 - 13936754
Alignment:
Q  39 aaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgg 105  Q
    |||||||||||  || ||| |||||||||||||||||||| |||||| |||||||||||||||||||    
T  13936820 aaaggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattgg 13936754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 145
Target Start/End: Complemental strand, 22851496 - 22851382
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaa 130  Q
    |||||||||| ||||||||  || ||| ||||||||||| ||||||||  ||||| |||||||||||||||||| ||||  |||  |   ||||||||||    
T  22851496 aaatcagaaagggggaaaaagatggggtgcaaaatcgcttgtttaaaaacatggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaa 22851397  T
Q  131 ttaagccaaataaaa 145  Q
    |||||||||| ||||    
T  22851396 ttaagccaaaaaaaa 22851382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 9822854 - 9822781
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    |||||||||| ||||||||  ||| || ||||||||||||||||||||  ||||| ||||||||||||||||||    
T  9822854 aaatcagaaagggggaaaaagatatggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattg 9822781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 6092881 - 6092803
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    ||||| |||||||||||||  || ||| ||||||||| ||  |||||| ||||||||||||||||||||||||| ||||    
T  6092881 aaatctgaaaaggggaaaaagatggggtgcaaaatcgttcaattaaaaatatgggatgcaaaatcgcacaattgacaaa 6092803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 15042261 - 15042148
Alignment:
Q  21 ggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgaga 120  Q
    ||||||| | |||||||||| ||||||||  || | | |||||||||||| |||||||| || || ||||||||| |||||||||||||  |||| | |     
T  15042261 ggggaccttgaaatcagaaagggggaaaatgatggcgtgcaaaatcgctcatttaaaacaatagggtgcaaaatcacacaattggcaaaagataaggggg 15042162  T
Q  121 aaaagtgcaattaa 134  Q
     |||||||||||||    
T  15042161 gaaagtgcaattaa 15042148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 33726756 - 33726696
Alignment:
Q  75 aaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaag 135  Q
    |||||||| ||| |||||||||||||||||| ||||||||  | |||||||||||||||||    
T  33726756 aaaactataggaggcaaaatcgcacaattggtaaactatagggggaaaaagtgcaattaag 33726696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 9623864 - 9623936
Alignment:
Q  67 gctcgtttaaaactat--gggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagcca 138  Q
    ||||||||||||||||  ||| ||||||||| ||| ||||||||||||| | ||  ||||||||||||||||||    
T  9623864 gctcgtttaaaactatatggggtgcaaaatcacacgattggcaaactat-aggatgaaaagtgcaattaagcca 9623936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 13937365 - 13937443
Alignment:
Q  59 gcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||| |||||||||||  ||||| |||||| ||||||||||| ||||  |||  | | |||||||||||||||||    
T  13937365 gcaaaatcactcgtttaaaaacatggggtgcaaattcgcacaattgacaaaaaataggggggaaaagtgcaattaagcc 13937443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 41662349 - 41662459
Alignment:
Q  30 aaaatcagaaaagggg-aaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgc 128  Q
    ||||||||||| |||| ||||  || ||| ||||||||||||  | ||||  | ||| |||||||||||||||||||||||  |||  | | ||||||||    
T  41662349 aaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgc 41662448  T
Q  129 aattaagccaa 139  Q
    |||||||||||    
T  41662449 aattaagccaa 41662459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 109
Target Start/End: Original strand, 15043721 - 15043809
Alignment:
Q  21 ggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    ||||||| | ||||||||||||| |||||  |  ||| | ||||||||||||||||||||||||    ||||||||| |||||| ||||    
T  15043721 ggggaccttgaaatcagaaaaggagaaaagaacggggtgtaaaatcgctcgtttaaaactatggagcacaaaatcgcgcaattgtcaaa 15043809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 32703569 - 32703712
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32703569 catcatcactaaatgtcatggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaa 32703668  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagccaaataaaa 145  Q
    |||||||||||||  | | |||||||||||||||||||| ||||    
T  32703669 ttggcaaactataggggggaaaagtgcaattaagccaaaaaaaa 32703712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 4239286 - 4239422
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    |||| |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4239286 atcaacactaaatgtcatggggaccataaaatcagaaagggggaaaaatatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 4239385  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagccaa 139  Q
    ||||||||||||  | |||||||||||||||||||||    
T  4239386 tggcaaactatagggggaaaaagtgcaattaagccaa 4239422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 28196692 - 28196827
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    ||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28196692 catcatcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaa 28196791  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||||||||  | | |||||||||||||||||    
T  28196792 ttggcaaactataggggggaaaagtgcaattaagcc 28196827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 9380663 - 9380795
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  9380663 cagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattg 9380762  T
Q  105 gcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||||  | | |||||||||||||||||    
T  9380763 gcaaactataggggggaaaagtgcaattaagcc 9380795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 25162010 - 25161879
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25162010 cagcactaaatgtcatggggaccatacaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattg 25161911  T
Q  105 gcaaactataatgagaaaaagtgcaattaagc 136  Q
    ||||||||||  | | ||||||||||||||||    
T  25161910 gcaaactataggggggaaaagtgcaattaagc 25161879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 28196481 - 28196346
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28196481 catcagcattaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaa 28196382  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||| ||||  | | |||||||||||||||||    
T  28196381 ttggcaaattataggggggaaaagtgcaattaagcc 28196346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 292916 - 292782
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  292916 atcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactgtagggggcaaaatcgctcgtttaaaactatgagatgcaaaattgcacaat 292817  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||||||  | | |||||||||||||||||    
T  292816 tggcaaactataggggggaaaagtgcaattaagcc 292782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 39744385 - 39744519
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39744385 atcagcactaaatgtcatggggaccacaaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 39744484  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    || |||||||||  | | |||||||||||||||||    
T  39744485 tgacaaactataggggggaaaagtgcaattaagcc 39744519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 169358 - 169496
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    ||||| |||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  169358 catcaacactaaatgtcatggggaccataaaatcaaaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaa 169457  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    ||| |||||||||  | | |||| |||||||||||||||    
T  169458 ttgacaaactataggggggaaaaatgcaattaagccaaa 169496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 169149 - 169013
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    ||||| |||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  169149 catcaacactaaatgtcatggggaccataaaatcagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaattatggggtgcaaaatcgcacaa 169050  T
Q  102 ttggcaaactataatgaga-aaaagtgcaattaagcc 137  Q
    |||||||||||||  | || |||||||||||||||||    
T  169049 ttggcaaactatagggggagaaaagtgcaattaagcc 169013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 293139 - 293271
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||| ||| |||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  293139 cagcactaaatttcatgggggccataaaatcagaaagggggaaaactatacggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattg 293238  T
Q  105 gcaaactataatgagaaaaagtgcaattaagcc 137  Q
     |||||||||  | |||||||||||||||||||    
T  293239 acaaactatagggggaaaaagtgcaattaagcc 293271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 9380435 - 9380307
Alignment:
Q  9 actaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaa 108  Q
    ||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  9380435 actaaatgtcatgaggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggggcaaaatcgcacaattggcaa 9380336  T
Q  109 actataatgagaaaaagtgcaattaagcc 137  Q
    ||||||  | | |||||||||||||||||    
T  9380335 actataggggggaaaagtgcaattaagcc 9380307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 2 - 138
Target Start/End: Original strand, 23540171 - 23540307
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||    
T  23540171 catcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggtaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaa 23540270  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcca 138  Q
    ||| |||||||||  |   ||||||||||||||||||    
T  23540271 ttgacaaactataggggtgaaaagtgcaattaagcca 23540307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 32703360 - 32703225
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  32703360 catcagcattaaatgtcacggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacggggtgcataatcgcacaa 32703261  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||| ||||  | | |||||||||||||||||    
T  32703260 ttggcaaattataggggggaaaagtgcaattaagcc 32703225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 9023378 - 9023244
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||| ||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  9023378 atcagcattaaatgtcatggggaccataaaatcataaagggggaaaactatagggggcaaaatcactcgtttaaaactatggggtgcaaaatcgcacaat 9023279  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||||||  |   |||||||||||||||||    
T  9023278 tggcaaactataggggagaaaagtgcaattaagcc 9023244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 43292168 - 43292038
Alignment:
Q  6 agcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgg 105  Q
    |||||||||||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  43292168 agcactaaatgtcatgaggaccataaaatcagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattga 43292069  T
Q  106 caaactataatgagaaaaagtgcaattaagc 136  Q
    |||||||||  |  |||||||||||||||||    
T  43292068 caaactataggggaaaaaagtgcaattaagc 43292038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 138
Target Start/End: Original strand, 39086542 - 39086678
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| |  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  39086542 catcagcactaaatgtcatgcagaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactattaggtgcaaaatcgcacaa 39086641  T
Q  102 ttggcaaactataatgaga-aaaagtgcaattaagcca 138  Q
    |||||||||||| ||| || ||||||||||||||||||    
T  39086642 ttggcaaactat-atgggagaaaagtgcaattaagcca 39086678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 39744162 - 39744030
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||  ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||    
T  39744162 cagcactaaacatcacggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaattatggggtggaaaatcgcacaattg 39744063  T
Q  105 gcaaactataatgagaaaaagtgcaattaagcc 137  Q
    | ||||||||  | |||||||||||||||||||    
T  39744062 gtaaactatagggggaaaaagtgcaattaagcc 39744030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 9023605 - 9023734
Alignment:
Q  8 cactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggca 107  Q
    |||||||| | | |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||    
T  9023605 cactaaatctgatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgaca 9023704  T
Q  108 aactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||  | | |||||||||||||||||    
T  9023705 aactataggggggaaaagtgcaattaagcc 9023734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 43292279 - 43292413
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    |||| ||||||||||||  ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43292279 atcaacactaaatgtcattgggac-ataaaatcagaaa-ggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 43292376  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagccaa 139  Q
    |||||||||| |  | | |||| ||||||||||||||    
T  43292377 tggcaaactaaaggggggaaaaatgcaattaagccaa 43292413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 25162233 - 25162344
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  25162233 atcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcacacaat 25162332  T
Q  103 tggcaaactata 114  Q
    || |||| ||||    
T  25162333 tgacaaaatata 25162344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 48406096 - 48405962
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    ||||| |||||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||| ||    
T  48406096 catcatcactaaatgtcatggggaccataaagtcagaaagggggaaaattatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcataa 48405997  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||||||| | | | |||||||||||||||||    
T  48405996 ttggcaaactat-agggggaaaagtgcaattaagcc 48405962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 23539974 - 23539862
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| ||| |||||||||||||||| | |||||| ||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  23539974 catcagcactaaatgtcatgggaaccataaaatcagaaaggaggaaaaatatagggggcaaaatcgttcgttttaaactatggggtgcaaaatcgcacaa 23539875  T
Q  102 ttggcaaactata 114  Q
    |||||||||||||    
T  23539874 ttggcaaactata 23539862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 26207495 - 26207383
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||| ||||||||| ||| |||||||||||||||| | ||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  26207495 catcagcattaaatgtcatgggaaccataaaatcagaaaggaggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaa 26207396  T
Q  102 ttggcaaactata 114  Q
    |||||||||||||    
T  26207395 ttggcaaactata 26207383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 48406308 - 48406416
Alignment:
Q  6 agcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgg 105  Q
    |||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  48406308 agcattaaatgtcatggggaccataaaatcagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattgg 48406407  T
Q  106 caaactata 114  Q
    |||| ||||    
T  48406408 caaattata 48406416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 12757900 - 12757789
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||| ||| ||||||||||||||||||||  || ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  12757900 atcagcactaaatatcatggggaccataaaatcagaaagaggaaaaactataggggacaaaatcgctcgtttaaaactatgagatgcaaaatcgcacaat 12757801  T
Q  103 tggcaaactata 114  Q
    || |||||||||    
T  12757800 tgacaaactata 12757789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 26207665 - 26207800
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    ||||| |||||||| ||| ||| |||||||||||||||| | ||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  26207665 catcaacactaaatatcatgggaaccataaaatcagaaaggaggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaa 26207764  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||||||||  | | |||| ||||||||||||    
T  26207765 ttggcaaactataggggggaaaaatgcaattaagcc 26207800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 6 - 134
Target Start/End: Original strand, 12758127 - 12758254
Alignment:
Q  6 agcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgg 105  Q
    ||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||  ||||||| | || ||||||    
T  12758127 agcactaaatgtcatagggaccataaaatcagaaagggggaaaactatagggggcaaaattgctcgtttaaaactatggcgtgcaaaaacacataattgg 12758226  T
Q  106 caaactataatgagaaaaagtgcaattaa 134  Q
    |||||||| | || |||||||||||||||    
T  12758227 caaactat-aggaaaaaaagtgcaattaa 12758254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 44468849 - 44468954
Alignment:
Q  8 cactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggca 107  Q
    |||||||||||| ||| | |||||||||||||| | |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  44468849 cactaaatgtcatggg-atcataaaatcagaaaggaggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggca 44468947  T
Q  108 aactata 114  Q
    |||||||    
T  44468948 aactata 44468954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 39912407 - 39912543
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||| ||||||||| ||| | | ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  39912407 atcagcactaaatgtcatggggactataaaatcataaaggcgaaaaactataggtggcaaaatcactcgtttaaaactatgggatgcaaaatcgcacaat 39912506  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    ||  ||||||| |  || ||||||| ||||||||||||    
T  39912507 tgataaactat-agaaggaaaagtgtaattaagccaaa 39912543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 137
Target Start/End: Complemental strand, 39912181 - 39912054
Alignment:
Q  8 cactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggca 107  Q
    |||||||| | | |||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||| ||||||||||||||   |    
T  39912181 cactaaatctgatggggaccataaaatcagaaagggggaaaactata-ggggcaaaatcgttcgtttaaaactat-ggatgtaaaatcgcacaattaata 39912084  T
Q  108 aactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||  ||| |||||||||||||||||    
T  39912083 aactatagggaggaaaagtgcaattaagcc 39912054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 36095915 - 36095845
Alignment:
Q  39 aaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||||  |||||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  36095915 aaaggggaaaaagatagggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 36095845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 50678885 - 50678807
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  50678885 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 50678807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 139
Target Start/End: Original strand, 50679372 - 50679480
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaa 130  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||| ||||||||||||  |||  |   ||||||||||    
T  50679372 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgtacaattggcaaaagataggggtgaaaagtgcaa 50679471  T
Q  131 ttaagccaa 139  Q
    |||||||||    
T  50679472 ttaagccaa 50679480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 36096423 - 36096501
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| ||| ||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  36096423 aaatcagaaaggggaaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 36096501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 43050713 - 43050610
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaa 130  Q
    |||||||||| ||||||||  || ||| |||||||| |||||||||||  ||||| ||||||||||||||||||| |||  |||  ||  ||||||||||    
T  43050713 aaatcagaaagggggaaaaagatggggtgcaaaatcactcgtttaaaaacatggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaa 43050614  T
Q  131 ttaa 134  Q
    ||||    
T  43050613 ttaa 43050610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 43051200 - 43051278
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    ||||||||||  |||||||  || ||| ||||||||||||||||||||  ||||| ||||||||| |||||||||||||    
T  43051200 aaatcagaaagagggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcacacaattggcaaa 43051278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 137
Target Start/End: Complemental strand, 56505795 - 56505693
Alignment:
Q  35 cagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaa 134  Q
    |||||| ||||||||  || ||| ||||||| ||||  |||||| |||||| |||||||||||||||||||||||  |||  | | ||||||||||||||    
T  56505795 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 56505696  T
Q  135 gcc 137  Q
    |||    
T  56505695 gcc 56505693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 11241443 - 11241387
Alignment:
Q  83 gggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagccaa 139  Q
    |||||||||||||||||||||  ||||  |||| ||| |||||||||||||||||||    
T  11241443 gggatgcaaaatcgcacaattaacaaaagataaggaggaaaagtgcaattaagccaa 11241387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 16555762 - 16555873
Alignment:
Q  29 taaaatcagaaaagggg-aaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtg 127  Q
    |||||||||||| |||| ||||  || ||| ||||||||||||    ||||  ||||| ||||||||||||||||| |||||  |||| | | |||||||    
T  16555762 taaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtg 16555861  T
Q  128 caattaagccaa 139  Q
    ||||||||||||    
T  16555862 caattaagccaa 16555873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 45830152 - 45830222
Alignment:
Q  39 aaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||||  || ||| |||||||||||| |||||||  ||||| || ||||||||||||||| ||||    
T  45830152 aaaggggaaaaagatggggtgcaaaatcgctcttttaaaaacatggggtgtaaaatcgcacaattgacaaa 45830222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 56506522 - 56506628
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaa 130  Q
    |||||||||| ||||||||  || ||| ||||||||||||  ||||||  ||||  | |||||| ||||||||||||||  |||| |   ||||||||||    
T  56506522 aaatcagaaagggggaaaatgatggggtgcaaaatcgctcaattaaaaacatggagtacaaaattgcacaattggcaaaagataagggtgaaaagtgcaa 56506621  T
Q  131 ttaagcc 137  Q
    |||||||    
T  56506622 ttaagcc 56506628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 136
Target Start/End: Complemental strand, 11529246 - 11529169
Alignment:
Q  59 gcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagc 136  Q
    |||||||||| || ||||||  ||||| ||||||||| |||||||||||||   ||  ||| ||||||||||||||||    
T  11529246 gcaaaatcgcacgattaaaaacatggggtgcaaaatcacacaattggcaaaagttagggaggaaaagtgcaattaagc 11529169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 111; Significance: 5e-56; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 464 - 330
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  464 atcagcactaaatgtcacggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 365  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    || |||||||||  | | |||||||||||||||||    
T  364 tgacaaactataggggggaaaagtgcaattaagcc 330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 685 - 819
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||| ||||||||| |||||||||||||||||||| | | ||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  685 atcagcattaaatgtcatggggaccataaaatcagaaatgag-aaaactatagggg-caaaatcgctcgtttaaaattatggggtgcaaaatcgcacaat 782  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    ||||||||||| | | ||||||||||||||||||||||    
T  783 tggcaaactat-aggggaaaaagtgcaattaagccaaa 819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 5e-56; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 37888968 - 37888830
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37888968 catcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaa 37888869  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    |||||||||||||  | | ||||||||||||||||||||    
T  37888868 ttggcaaactataggggggaaaagtgcaattaagccaaa 37888830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 10533169 - 10533034
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10533169 catcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaa 10533070  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||||||||  | | |||||||||||||||||    
T  10533069 ttggcaaactataggggggaaaagtgcaattaagcc 10533034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 37889178 - 37889313
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37889178 catcagcactaaatgtcatggggaccataaaatcagaaagggagaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaa 37889277  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||||||||  | | |||||||||||||||||    
T  37889278 ttggcaaactataggggggaaaagtgcaattaagcc 37889313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 20419244 - 20419378
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20419244 atcagcactaaatgtcacggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 20419343  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    || |||||||||  | | |||||||||||||||||    
T  20419344 tgacaaactataggggggaaaagtgcaattaagcc 20419378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 37972316 - 37972450
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37972316 atcagcactaaatgtcatggggaccataaaatctgaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 37972415  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||||||  | | |||||||||||||||||    
T  37972416 tggcaaactataggggggaaaagtgcaattaagcc 37972450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 22740288 - 22740156
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22740288 cagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattg 22740189  T
Q  105 gcaaactataatgagaaaaagtgcaattaagcc 137  Q
     |||||||||  | | |||||||||||||||||    
T  22740188 acaaactataggggggaaaagtgcaattaagcc 22740156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 17157102 - 17156967
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  17157102 catcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaa 17157003  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||| |||||||||  | | |||||||||||||||||    
T  17157002 ttgacaaactataggggggaaaagtgcaattaagcc 17156967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 18864101 - 18863970
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18864101 atcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 18864002  T
Q  103 tggcaaactataatgagaaaaagtgcaattaa 134  Q
    || |||||||||  | | ||||||||||||||    
T  18864001 tgacaaactataggggggaaaagtgcaattaa 18863970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 29293057 - 29292922
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  29293057 catcagcactaaatgtcatgggaaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatgggatgcaaaatcgcacaa 29292958  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||||||||  | | |||||||||||||||||    
T  29292957 ttggcaaactataggggggaaaagtgcaattaagcc 29292922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 20419020 - 20418891
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20419020 cagcactaaatgtcatggggaccataaaatcagaaagggtgaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattg 20418921  T
Q  105 gcaaactataatgagaaaaagtgcaattaa 134  Q
    ||||||||||  | | ||||||||||||||    
T  20418920 gcaaactataggggggaaaagtgcaattaa 20418891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 3205012 - 3205147
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    ||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  3205012 catcaacactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacggggtgcaaaatcgcacaa 3205111  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||| |||||||||  | | |||||||||||||||||    
T  3205112 ttgacaaactataggggggaaaagtgcaattaagcc 3205147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 13744152 - 13744286
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||| ||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13744152 catcagcactaaatatcatggggaccataaaatcaaaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaa 13744251  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||| |||||||| | | | |||||||||||||||||    
T  13744252 ttgacaaactat-agggggaaaagtgcaattaagcc 13744286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 18864322 - 18864433
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||    
T  18864322 atcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcttttaaaactatgaggtgcaaaatcgcacaat 18864421  T
Q  103 tggcaaactata 114  Q
    ||||||||||||    
T  18864422 tggcaaactata 18864433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 36527724 - 36527854
Alignment:
Q  9 actaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaa 108  Q
    ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36527724 actaaatgtcatggagaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcataattggcaa 36527823  T
Q  109 actataatga-gaaaaagtgcaattaagccaa 139  Q
    ||||| |||| | |||| ||||||||||||||    
T  36527824 actat-atgagggaaaaatgcaattaagccaa 36527854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 3204802 - 3204667
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||| ||||||||| ||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  3204802 catcagcaataaatgtcatggggaccataaaatcagaaagagggaaaactatagggggcaaaattgctcgtttaaaactatggggtgcaaaatcgcacaa 3204703  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagccaa 139  Q
    |||||||||||||  | |  ||||||||||||||||||    
T  3204702 ttggcaaactata--gggggaaagtgcaattaagccaa 3204667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 42418725 - 42418591
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  42418725 atcagcactaaatgtcatggggaccataaaattagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactataggatacaaaatcgcacaat 42418626  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    | ||||||||||  | | ||||||| |||||||||    
T  42418625 tagcaaactataggggggaaaagtgaaattaagcc 42418591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 138
Target Start/End: Original strand, 9035211 - 9035348
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggg-gaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcaca 100  Q
    ||||| ||||||||||||   |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9035211 catcatcactaaatgtcatctggaccataaaatcagaaaggggagaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcaca 9035310  T
Q  101 attggcaaactataatgagaaaaagtgcaattaagcca 138  Q
    ||||||||||||||  | | ||||||||||||||||||    
T  9035311 attggcaaactataggggggaaaagtgcaattaagcca 9035348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 9035003 - 9034867
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactat-gggatgcaaaatcgcaca 100  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||    
T  9035003 catcagcattaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggggtgcagaatcgcaca 9034904  T
Q  101 attggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||| ||||  | | |||||||||||||||||    
T  9034903 attggcaaattataggggggaaaagtgcaattaagcc 9034867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 13741690 - 13741555
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13741690 atcagcactaaatgtcacggggaccataaa-tcagaaagtgggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 13741592  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagccaa 139  Q
    ||| ||||||||  | | |||| ||||||||||||||    
T  13741591 tggtaaactataggggggaaaaatgcaattaagccaa 13741555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 37972092 - 37971960
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    |||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37972092 cagcgctaaatgtcatggggaccataaaatcagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattg 37971993  T
Q  105 gcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||| |  |   |||||||||||||||||    
T  37971992 gcaaactacaggggagaaaagtgcaattaagcc 37971960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 2 - 138
Target Start/End: Complemental strand, 48359453 - 48359319
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  48359453 catcagcactaaatgtcatggggaccataaaatcagaaagggggaaa-ctatagggggtaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaa 48359355  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcca 138  Q
    ||| |||||||| | | | ||||||||||||||||||    
T  48359354 ttgacaaactat-agggggaaaagtgcaattaagcca 48359319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 29293265 - 29293403
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||  |||||||||||||||    
T  29293265 catcagcagtaaatgtcatgggaaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatggagtgcaaaatcgcacaa 29293364  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    |||||||||||||  | | |||| |||||||||||||||    
T  29293365 ttggcaaactataggggggaaaaatgcaattaagccaaa 29293403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 42418950 - 42419060
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactat-gggatgcaaaatcgcacaatt 103  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||    
T  42418950 cagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggggtgcaaaaacgcacaatt 42419049  T
Q  104 ggcaaactata 114  Q
    |||||||||||    
T  42419050 ggcaaactata 42419060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 38826832 - 38826967
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| | |||||||||||||||    
T  38826832 catcagcactaaatgtcatggggatcataaaatcagaaagggggaaaactatagggggcaaaaccgttcgtttaaaactatgaggtgcaaaatcgcacaa 38826931  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||| |||||||||  | | |||| ||||||||||||    
T  38826932 ttgacaaactataggggggaaaaatgcaattaagcc 38826967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 22740512 - 22740622
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||| ||||| ||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  22740512 atcagcactaaatgtcatggggaccatagaatcataaa-ggggaaaactatagggagcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 22740610  T
Q  103 tggcaaactata 114  Q
    || |||||||||    
T  22740611 tgacaaactata 22740622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 48359600 - 48359707
Alignment:
Q  25 accataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaa 124  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||| ||||||| | | ||||||    
T  48359600 accataaaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatgtggtgcaaaatcgcacaattggtaaactat-aggggaaaaa 48359698  T
Q  125 gtgcaatta 133  Q
    |||||||||    
T  48359699 gtgcaatta 48359707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 36527518 - 36527387
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    ||||| ||| |||||||| |||||| ||||||||||||| ||| ||||||||| |||| ||||| | ||||||||||||||||| |||||||||||||||    
T  36527518 catcatcaccaaatgtcatggggactataaaatcagaaaggggaaaaactataaggggaaaaattgatcgtttaaaactatggggtgcaaaatcgcacaa 36527419  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaa 134  Q
    ||| |||||||| | | ||||||||||||||||    
T  36527418 ttgacaaactat-aggggaaaaagtgcaattaa 36527387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 16198967 - 16199031
Alignment:
Q  73 ttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16198967 ttaaaactatggggtgcaaaatcgcacaattggcaaactataatgggaaaaagtgcaattaagcc 16199031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 140
Target Start/End: Complemental strand, 44599595 - 44599486
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaa 130  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||  |||  |   ||||||||||    
T  44599595 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 44599496  T
Q  131 ttaagccaaa 140  Q
    ||||||||||    
T  44599495 ttaagccaaa 44599486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 44600083 - 44600161
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  44600083 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 44600161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 8643714 - 8643820
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaa 130  Q
    |||||||||| ||||||||  || ||| |||||||||||||||||| |  ||||| ||||||||||||||||||| |||  |||  ||  ||||||||||    
T  8643714 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaataacatggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaa 8643813  T
Q  131 ttaagcc 137  Q
    |||||||    
T  8643814 ttaagcc 8643820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 13863419 - 13863341
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    ||||||||||  |||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  13863419 aaatcagaaagagggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 13863341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 13863905 - 13863982
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| ||||||||  || ||| |||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  13863905 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgc-aaatcgcacaattggcaaa 13863982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 60 - 137
Target Start/End: Original strand, 46816288 - 46816365
Alignment:
Q  60 caaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||||||||||||| |||||| |||||||||||| |||||| |||  |||  | |||||||||||||||||||    
T  46816288 caaaatcgctcgtttaaaaatatggggtgcaaaatcgcataattggtaaaagatagcgggaaaaagtgcaattaagcc 46816365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 3687660 - 3687712
Alignment:
Q  87 tgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagccaa 139  Q
    |||||||||||||||||||||||  |||  | | |||||||||||||||||||    
T  3687660 tgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccaa 3687712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 18925320 - 18925373
Alignment:
Q  81 atgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagc 136  Q
    ||||| ||||||||||||||||| ||||| ||||  ||| ||||||||||||||||    
T  18925320 atggggtgcaaaatcgcacaattagcaaaatata--gaggaaaagtgcaattaagc 18925373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 3e-54; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 26692739 - 26692878
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  26692739 catcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaa 26692838  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagccaaat 141  Q
    |||||||||||||  | | |||||||||||||| ||||||    
T  26692839 ttggcaaactatagaggggaaaagtgcaattaaaccaaat 26692878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 7664597 - 7664730
Alignment:
Q  7 gcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggc 106  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  7664597 gcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgac 7664696  T
Q  107 aaactataatgagaaaaagtgcaattaagccaaa 140  Q
    ||||||||  ||| ||||||||||||||||||||    
T  7664697 aaactatagggaggaaaagtgcaattaagccaaa 7664730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 8851282 - 8851151
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    |||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8851282 atcaacactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 8851183  T
Q  103 tggcaaactataatgagaaaaagtgcaattaa 134  Q
    ||||||||||||  | | ||||||||||||||    
T  8851182 tggcaaactataggggggaaaagtgcaattaa 8851151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 8851503 - 8851636
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8851503 atcagcactaaatgtcatggggaccataaaatcagaaa-ggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 8851601  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    || |||||||||  | | |||||||||||||||||    
T  8851602 tgacaaactataggggggaaaagtgcaattaagcc 8851636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 19141768 - 19141880
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19141768 catcagcactaaatgtcatgggaaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatgggatgcaaaatcgcacaa 19141867  T
Q  102 ttggcaaactata 114  Q
    |||||||||||||    
T  19141868 ttggcaaactata 19141880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 17851323 - 17851456
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  17851323 atcagcactaaatgtcatggg-accataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgtaaaatcgcacaat 17851421  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||||||||    ||||||||||||||||||    
T  17851422 tggcaaactataaaagaaaaaagtgcaattaagcc 17851456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 6 - 134
Target Start/End: Complemental strand, 5793578 - 5793450
Alignment:
Q  6 agcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgg 105  Q
    ||||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5793578 agcacaaaatgtcatggggaccataaaatcagaaagagggaaaactatagggggcaaaatcgctcgtttaaaactataggatgcaaaatcgcacaattgg 5793479  T
Q  106 caaactataatgagaaaaagtgcaattaa 134  Q
    ||||||| || | | ||||||||||||||    
T  5793478 caaactacaagggggaaaagtgcaattaa 5793450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 16910961 - 16910826
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    |||| |||||||||||| |||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  16910961 atcaacactaaatgtcatggggaccataaaatcagaaaggaggaaaactatagagggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 16910862  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcca 138  Q
    |||||||||| |  | | ||||||||||||||||||    
T  16910861 tggcaaactacatgggggaaaagtgcaattaagcca 16910826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 6325049 - 6324940
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| |||| |||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6325049 cagcactaaatgtcatgggggccataaaatcagaaagagggaaaactataggggacaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 6324950  T
Q  105 gcaaactata 114  Q
    ||||||||||    
T  6324949 gcaaactata 6324940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 16911191 - 16911300
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  16911191 cagcactaaatgtcacggagaccataaaatcagaaagggggaaaactataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattg 16911290  T
Q  105 gcaaactata 114  Q
    ||||||||||    
T  16911291 gcaaactata 16911300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 5 - 145
Target Start/End: Complemental strand, 17851109 - 17850970
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||| ||| |||||||||||||||| ||| ||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  17851109 cagcactaaatatcatggggaccataaaatcataaagggggaaatctatagggggcaaaatcgctcgtt-aaaactatggggtgcaaaatcgcacaattg 17851011  T
Q  105 gcaaactataatgagaaaaagtgcaattaagccaaataaaa 145  Q
    ||||||||||  | | |||||||||||||||||||| ||||    
T  17851010 gcaaactataggggggaaaagtgcaattaagccaaaaaaaa 17850970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 7664378 - 7664248
Alignment:
Q  7 gcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggc 106  Q
    ||||||||| ||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||      
T  7664378 gcactaaatatcatggggaccataaaatcagaaagggggaaaattatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgat 7664279  T
Q  107 aaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||  | | |||||||||||||||||    
T  7664278 aaactataggggggaaaagtgcaattaagcc 7664248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 7979699 - 7979587
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    |||||||||||||||||  |||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7979699 atcagcactaaatgtcatagggatcataaaatcagaaagagggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 7979600  T
Q  103 tggcaaactataa 115  Q
    || ||||||||||    
T  7979599 tgtcaaactataa 7979587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 26692531 - 26692399
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||| ||||||||  |||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  26692531 catcagcaataaatgtcttggggaccataaaatcagaaaggggaaaaattatagggagcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaa 26692432  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaa 134  Q
    ||| |||||||||  | ||||||||||||||||    
T  26692431 ttgacaaactatagagggaaaaagtgcaattaa 26692399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 7979928 - 7980056
Alignment:
Q  8 cactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggca 107  Q
    |||||||| ||| |||||||||||||||||||| ||| ||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||| |||    
T  7979928 cactaaatatcatggggaccataaaatcagaaaggggaaaaactataggcggcgaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattagca 7980027  T
Q  108 aactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||  | |||||||||||||||||||    
T  7980028 aactatagag-gaaaaagtgcaattaagcc 7980056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 6325267 - 6325399
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||| ||   ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||    
T  6325267 atcagcactaaatatcctagggaccataaagtcagaaatggggaaaactatagggggcaaaatcgctcgtttaatactatgaggtgcaaaatcgcacaat 6325366  T
Q  103 tggcaaactataatgagaaaaagtgcaattaag 135  Q
    ||||||||||||  | | |||||||||||||||    
T  6325367 tggcaaactatatgggggaaaagtgcaattaag 6325399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 41790831 - 41790966
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    ||||| |||||||| ||| ||| ||||||||||||||||  |||||||||||||||||||||||||||||||| |||| |||||  ||||||||||||||    
T  41790831 catcaacactaaatatcatgggaaccataaaatcagaaagagggaaaactatagggggcaaaatcgctcgttttaaacaatggggggcaaaatcgcacaa 41790930  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||| ||||  | | |||||||||||||||||    
T  41790931 ttggcaaaatataggggggaaaagtgcaattaagcc 41790966  T

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Target: chr2; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 41790625 - 41790513
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||| ||||||||| | | |||||||||||||||| | ||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  41790625 catcagcattaaatgtcatgagaaccataaaatcagaaaggaggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaa 41790526  T
Q  102 ttggcaaactata 114  Q
    ||| |||||||||    
T  41790525 ttgacaaactata 41790513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 39 - 137
Target Start/End: Complemental strand, 37720301 - 37720204
Alignment:
Q  39 aaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||  | | |||||||||||||||||    
T  37720301 aaaggggaaaactatagggg-caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37720204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 5379890 - 5380013
Alignment:
Q  14 atgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactat 113  Q
    |||||| ||||||||| |||||||||| |||| ||| |||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||| |||||||    
T  5379890 atgtcagggggaccatcaaatcagaaagggggtaaaatatagggggcaaaatcgcacgttttaaactacggggtgcaaaatcgcacaattggtaaactat 5379989  T
Q  114 aatgagaaaaagtgcaattaagcc 137  Q
    |  | | |||||||||||||||||    
T  5379990 aggggggaaaagtgcaattaagcc 5380013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 18749859 - 18749724
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||| | |||| ||||||||||||||| ||| |||||||||||||||||||||  ||||||||||||||||| ||||||||| || ||    
T  18749859 catcagcactaaatgttatggggcccataaaatcagaaa-gggaaaaactatagggggcaaaatcattcgtttaaaactatggggtgcaaaatcacataa 18749761  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagccaa 139  Q
    ||| |||||||  | ||| |||||||||||||| ||||    
T  18749760 ttgacaaacta-gaggagtaaaagtgcaattaaaccaa 18749724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 5378777 - 5378661
Alignment:
Q  21 ggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgaga 120  Q
    ||||||||| ||||||||||  ||| ||| |||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||||||  | |     
T  5378777 ggggaccatcaaatcagaaagagggtaaaatatagggggcaaaatcgcacgttttaaactacggggtgcaaaatcgcacaattggcaaactatagggggg 5378678  T
Q  121 aaaagtgcaattaagcc 137  Q
    |||||||||||||||||    
T  5378677 aaaagtgcaattaagcc 5378661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 19141547 - 19141446
Alignment:
Q  33 atcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaatt 132  Q
    |||| ||| |||||||||||||||||| ||| ||||||||||||||||||||| |||||||| |||||||||||||||||||  | ||||||||||||||    
T  19141547 atcataaagggggaaaactatagggggtaaattcgctcgtttaaaactatggggtgcaaaat-gcacaattggcaaactatagggggaaaaagtgcaatt 19141449  T
Q  133 aag 135  Q
    |||    
T  19141448 aag 19141446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 18750059 - 18750157
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| ||||||||||||||||||||              ||||||||||||||||||||||||||||||| |||||||||||||||    
T  18750059 catcagcactaaatgtcatggggaccataaaatcagaaa--------------gggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaa 18750144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 138
Target Start/End: Original strand, 38490789 - 38490895
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaa 130  Q
    |||||| ||| ||||||||  || ||| ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||  |||  |||||||||    
T  38490789 aaatcataaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaccatgagatgcaaaatcgcacaattggtaaactatagggag-gaaagtgcaa 38490887  T
Q  131 ttaagcca 138  Q
    ||||||||    
T  38490888 ttaagcca 38490895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 2638926 - 2638848
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| ||||||||  || ||| |||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  2638926 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaa 2638848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 18296182 - 18296104
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||||||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  18296182 aaatcagaaaaggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 18296104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 2639430 - 2639508
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  2639430 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 2639508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 7591307 - 7591229
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  7591307 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 7591229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 26841693 - 26841615
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  26841693 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 26841615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 26842186 - 26842264
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  26842186 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 26842264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 7591798 - 7591876
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| ||||||||  ||  || ||||||||||||||||||||  ||||| |||||||||||||||||| ||||    
T  7591798 aaatcagaaagggggaaaaaaatgaggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattgacaaa 7591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 3e-54; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 48105038 - 48105173
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  48105038 cagcactaaatatcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattg 48105137  T
Q  105 gcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    ||||||||||| | | ||||||||||||||||||||    
T  48105138 gcaaactataagggggaaaagtgcaattaagccaaa 48105173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 26814824 - 26814691
Alignment:
Q  7 gcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggc 106  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  26814824 gcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgac 26814725  T
Q  107 aaactataatgagaaaaagtgcaattaagccaaa 140  Q
    ||||||||  ||| ||||||||||||||||||||    
T  26814724 aaactatagggaggaaaagtgcaattaagccaaa 26814691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 49318085 - 49318227
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  49318085 catcagcactaaatgtcatgggaaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatgggatgcaaaatcgcacaa 49318184  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagccaaataaaa 145  Q
    |||||||||||| | | |  ||||||||||||||||||||||||    
T  49318185 ttggcaaactat-aggggggaaagtgcaattaagccaaataaaa 49318227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 9347261 - 9347123
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    ||||||| |||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9347261 catcagcgctaaatgtcatgcggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaa 9347162  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    |||||||||||||  | | ||||||||||||||||||||    
T  9347161 ttggcaaactataggggggaaaagtgcaattaagccaaa 9347123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 32162963 - 32163097
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  32162963 atcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataaggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 32163062  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||||||  | | |||||||||||||||||    
T  32163063 tggcaaactataggggggaaaagtgcaattaagcc 32163097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 50526391 - 50526524
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  50526391 catcagcattaaatgtcatgtggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaa 50526490  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaag 135  Q
    |||||||||||||  | |||||||||||||||||    
T  50526491 ttggcaaactatagggggaaaaagtgcaattaag 50526524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 6703592 - 6703460
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  6703592 cagcactaaatgtcatggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattg 6703493  T
Q  105 gcaaactataatgagaaaaagtgcaattaagcc 137  Q
    | ||||||||    |||||||||||||||||||    
T  6703492 gtaaactataggaggaaaaagtgcaattaagcc 6703460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 8 - 148
Target Start/End: Complemental strand, 13918575 - 13918435
Alignment:
Q  8 cactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggca 107  Q
    ||||||||||||  | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13918575 cactaaatgtcatagtgaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggca 13918476  T
Q  108 aactataatgagaaaaagtgcaattaagccaaataaaatat 148  Q
    |||||||    |||||||||||||||||||||| |||||||    
T  13918475 aactataggaggaaaaagtgcaattaagccaaaaaaaatat 13918435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 28633852 - 28633720
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  28633852 cagcactaaatgtcatgggaaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattg 28633753  T
Q  105 gcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||||| | | |||||||||||||||||    
T  28633752 gcaaactataagggggaaaagtgcaattaagcc 28633720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 2 - 138
Target Start/End: Complemental strand, 49317886 - 49317751
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  49317886 catcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggtaaaatcgctcgtttaaaactatgggatgcaaaattgcacaa 49317787  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcca 138  Q
    |||||||||||| | | | ||||||||||||||||||    
T  49317786 ttggcaaactat-agggggaaaagtgcaattaagcca 49317751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 50430001 - 50430137
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  50430001 atcagcactaaatgtcatggggaccataaaatcagaaagggagaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 50430100  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagccaa 139  Q
    ||||||||||||  | | |||||||||||||| ||||    
T  50430101 tggcaaactataggggggaaaagtgcaattaaaccaa 50430137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 999444 - 999578
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  999444 catcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggttgcaaaatcgcacaa 999543  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||| |||| | | | |||||||||||||||||    
T  999544 ttggcaatctat-agggggaaaagtgcaattaagcc 999578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 48104812 - 48104681
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  48104812 atcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 48104713  T
Q  103 tggcaaactataatgagaaaaagtgcaattaa 134  Q
    || |||||||||  | | ||||||||||||||    
T  48104712 tgccaaactataggggggaaaagtgcaattaa 48104681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 20480301 - 20480168
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20480301 atcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 20480202  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    || |||||||| | | | |||||||||||||||||    
T  20480201 tgacaaactat-agggggaaaagtgcaattaagcc 20480168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 50615540 - 50615677
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  50615540 catcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaa 50615639  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    ||| |||||||| | | | ||||||||||||||||||||    
T  50615640 ttgacaaactat-agggggaaaagtgcaattaagccaaa 50615677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 50623368 - 50623505
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  50623368 catcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaa 50623467  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    ||| |||||||| | | | ||||||||||||||||||||    
T  50623468 ttgacaaactat-agggggaaaagtgcaattaagccaaa 50623505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 46824199 - 46824332
Alignment:
Q  4 tcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaatt 103  Q
    |||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  46824199 tcagcactaaatgtcatggggaccataaaatcaaaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaatt 46824298  T
Q  104 ggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||||||    |||||||||||||||||||    
T  46824299 ggcaaactataggaggaaaaagtgcaattaagcc 46824332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 4692352 - 4692487
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| |||||||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||||| |||||||| ||||||    
T  4692352 catcagcactaaatgtcatggggaccataaaatcagaaaggggaaaaactataggaggtaaaatcgctcgtttaaaactatggggtgcaaaattgcacaa 4692451  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||||||||  | |||||||||||||||||||    
T  4692452 ttggcaaactatagggggaaaaagtgcaattaagcc 4692487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 28634077 - 28634208
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  28634077 atcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgatcgtttaaaactatggggtgcaaaatcgcacaat 28634176  T
Q  103 tggcaaactataatgagaaaaagtgcaattaa 134  Q
    || |||||||||  | | ||||||||||||||    
T  28634177 tgacaaactataggggggaaaagtgcaattaa 28634208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 21687159 - 21687022
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||    
T  21687159 atcagcactaaatgtcatggggaccataaaatcagaaaggaggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattacacaat 21687060  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    || |||||||||  | | ||||||||||||||||||||    
T  21687059 tgacaaactataggggggaaaagtgcaattaagccaaa 21687022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 27172244 - 27172108
Alignment:
Q  8 cactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggca 107  Q
    |||||||||||| ||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27172244 cactaaatgtcatgggaagcataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggca 27172145  T
Q  108 aactataatgagaaaaagtgcaattaagccaaataaaa 145  Q
    |||||| | | | |||||||||||||||||||| ||||    
T  27172144 aactat-agggggaaaagtgcaattaagccaaaaaaaa 27172108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 42611320 - 42611188
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    ||||| |||||||||||| ||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||    
T  42611320 catcaacactaaatgtcatgggaaccataaaatcagaaagggggaaaactataggaggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaa 42611221  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaa 134  Q
    |||||||||||||| | | ||||||||||||||    
T  42611220 ttggcaaactataagggggaaaagtgcaattaa 42611188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 13918789 - 13918920
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| |||||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||    
T  13918789 cagcactaaatgtcatggggaccataaaatcaaaaggggggaaaactatagggggcaaaatcgttcgtttaaaactatgaggtgcaaaatcgcacaattg 13918888  T
Q  105 gcaaactataatgagaaaaagtgcaattaagc 136  Q
    ||||||||||  ||| ||||||||||||||||    
T  13918889 gcaaactatagggaggaaaagtgcaattaagc 13918920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 46823977 - 46823846
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    |||| |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  46823977 atcaacactaaatgtcatgggtaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcgcacaat 46823878  T
Q  103 tggcaaactataatgagaaaaagtgcaattaa 134  Q
    ||||||||||||  | | ||||||||||||||    
T  46823877 tggcaaactataggggggaaaagtgcaattaa 46823846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 6703814 - 6703950
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| | |||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||| |||||||| |||||||    
T  6703814 atcagcactaaatgtcatgaggaccataaaatcagaaagggggaaaactatatgaggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaat 6703913  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagccaa 139  Q
    ||||||||||||  |   |||||||||||||||||||    
T  6703914 tggcaaactataggggagaaaagtgcaattaagccaa 6703950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 9347470 - 9347582
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    ||||| |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  9347470 catcaacactaaatgtcatgggaaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaa 9347569  T
Q  102 ttggcaaactata 114  Q
    |||||||||||||    
T  9347570 ttggcaaactata 9347582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 27172464 - 27172595
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  27172464 cagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggg-caaaatcgctcgtttaaaacaatgggatgcaaaatcgcacaattg 27172562  T
Q  105 gcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||| || |  | | |||||||||||||||||    
T  27172563 gcaaagtacaggggggaaaagtgcaattaagcc 27172595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 20371272 - 20371409
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactat-gggatgcaaaatcgcacaa 101  Q
    ||||||| ||||||||| |||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||    
T  20371272 atcagcattaaatgtcatggggaccataaaatcagaaagggggtaaactatagggggcaaaattgctcgtttaaaactatgggggtgcaaaatcgcacaa 20371371  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    |||||||||||| | | | ||||||||||||||||||||    
T  20371372 ttggcaaactat-agggggaaaagtgcaattaagccaaa 20371409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 137
Target Start/End: Original strand, 26815043 - 26815173
Alignment:
Q  7 gcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggc 106  Q
    ||||||||| ||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||      
T  26815043 gcactaaatatcatggggaccataaaatcagaaagggggaaaattatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgat 26815142  T
Q  107 aaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||  | | |||||||||||||||||    
T  26815143 aaactataggggggaaaagtgcaattaagcc 26815173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 3 - 145
Target Start/End: Complemental strand, 47498433 - 47498293
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| || ||||||||||||| ||| || ||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  47498433 atcagcactaaatgtcatggagaccataaaatcaaaaagggagaaaactatagagggcaaaatcgcttgtttaaaactatgggatgcaaaattgcacaat 47498334  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagccaaataaaa 145  Q
    ||||||||||||  | |  ||||||||||||||||||| ||||    
T  47498333 tggcaaactata--gggggaaagtgcaattaagccaaaaaaaa 47498293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 49318364 - 49318499
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| ||| ||||||||||||||||  ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  49318364 catcagcactaaatgtcatgggaaccataaaatcagaaa--gggaaaactataggggataaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 49318461  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    |||  ||||||||  | |||||| |||||||||||||||    
T  49318462 ttgataaactatagggggaaaaa-tgcaattaagccaaa 49318499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 999239 - 999134
Alignment:
Q  8 cactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggca 107  Q
    |||||||||||| || ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  999239 cactaaatgtcatggagaccataaaatcagaaa-ggagaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgaca 999141  T
Q  108 aactata 114  Q
    |||||||    
T  999140 aactata 999134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 3 - 143
Target Start/End: Original strand, 20480534 - 20480671
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||| ||||||||| |||||||||||||||||||| ||| || |||||||||||  ||||||||||||||||||||| || ||||||||||||||||    
T  20480534 atcagcattaaatgtcatggggaccataaaatcagaaaggggaaacactataggggg--aaatcgctcgtttaaaactatagggtgcaaaatcgcacaat 20480631  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagccaaataa 143  Q
    ||||||||||| | | | |||||||||||||||||||||||    
T  20480632 tggcaaactat-agggggaaaagtgcaattaagccaaataa 20480671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 42611533 - 42611670
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||| | |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||| | |||||||||||||||    
T  42611533 catcagcactaaatgttatggggaccataaaatcagaaaggggaaaaactatagggggcaaaatcgcttgtttaaaactatgaggtgcaaaatcgcacaa 42611632  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagccaa 139  Q
    ||| |||||||||  |   |||||||||||||| ||||    
T  42611633 ttgacaaactataggggagaaaagtgcaattaaaccaa 42611670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 20371171 - 20371061
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||    
T  20371171 atcagcactaaatgtcatagggaccataaaatcagaaa-ggggaaaactacagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaat 20371073  T
Q  103 tggcaaactata 114  Q
    || |||||||||    
T  20371072 tgacaaactata 20371061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 44911160 - 44911025
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    ||||| |||||||| ||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  44911160 catcaacactaaatatcatgggaaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaa 44911061  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||| ||||  | |  ||||||||||||||||    
T  44911060 ttggcaaaatatagggggggaaagtgcaattaagcc 44911025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 50429790 - 50429656
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| ||| |||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  50429790 catcagcactaaatgtcatggg-accataaaatcagaaaggatgaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaa 50429692  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    || ||||| ||||| | | |||||| ||||||||||    
T  50429691 ttagcaaattataaaggggaaaagtacaattaagcc 50429656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 44224039 - 44224148
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    |||||||||||||||||   |||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  44224039 atcagcactaaatgtcataaggaccataaaatcagaaaggggtaaaactataggggacaaaatcgctcgtttaaaactatgggatgcaaaatcacacaat 44224138  T
Q  103 tggcaaacta 112  Q
    ||| ||||||    
T  44224139 tggtaaacta 44224148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 21687386 - 21687498
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||||||||| | | |||||||||||||    
T  21687386 catcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactacagagggaaaaatcgctcgtttaaaactatgaggtacaaaatcgcacaa 21687485  T
Q  102 ttggcaaactata 114  Q
    |||||||| ||||    
T  21687486 ttggcaaattata 21687498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 44911356 - 44911488
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||| ||||||||| | | |||||||||||||||| | ||||||||||||||||||||||||||||||| |||| || || |||||||||||||||    
T  44911356 catcagcattaaatgtcatgagaaccataaaatcagaaaggaggaaaactatagggggcaaaatcgctcgttttaaacaatagggtgcaaaatcgcacaa 44911455  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaa 134  Q
    |||||||||||||  | |||||| |||||||||    
T  44911456 ttggcaaactatagggggaaaaaatgcaattaa 44911488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 50949484 - 50949596
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| | | |||||||||||||||| ||| ||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  50949484 catcagcactaaatgtcatgagaaccataaaatcagaaaggggaaaaactatagggggcaaaatcgctcgttttaaacaatgagatgcaaaatcgcacaa 50949583  T
Q  102 ttggcaaactata 114  Q
    ||| |||||||||    
T  50949584 ttgacaaactata 50949596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 4692155 - 4692022
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||||| |||||||||||||||| |||||||| ||||||| ||||||||||||| ||||    
T  4692155 catcagcactaaatgtcatgggaaccataaaatcagaaagggggaaa-ctatagggggcaaaatggctcgttttaaactataggatgcaaaatcgtacaa 4692057  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    || ||||||||||  | || ||||||||||||||||    
T  4692056 ttagcaaactatagag-gagaaagtgcaattaagcc 4692022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 32162857 - 32162734
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||||     || ||||||||||||||||||| |||||||| |||||||    
T  32162857 atcagcattaaatgtcatggggaccataaaatcagaaaggggaaaaactatagggg-----at-gctcgtttaaaactatggggtgcaaaattgcacaat 32162764  T
Q  103 tggcaaactataatgagaaaaagtgcaatt 132  Q
    ||||||||||||   |||||||||||||||    
T  32162763 tggcaaactataggaagaaaaagtgcaatt 32162734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 137
Target Start/End: Original strand, 19008692 - 19008804
Alignment:
Q  25 accataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaa 124  Q
    ||||| |||||||||| |||||||| ||||||||||||||| || ||||| |||||||||| ||||||||||||||||||  ||||||||  | | ||||    
T  19008692 accatcaaatcagaaagggggaaaattatagggggcaaaattgcacgttttaaactatggggtgcaaaatcgcacaattgcgaaactataggggggaaaa 19008791  T
Q  125 gtgcaattaagcc 137  Q
    |||||||||||||    
T  19008792 gtgcaattaagcc 19008804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 39691937 - 39692054
Alignment:
Q  20 aggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgag 119  Q
    ||||||||||||||||||||| ||||||||  |||||| |||||||| | |||||||||  ||||| |||||||||||||||||| |||| ||||  | |    
T  39691937 aggggaccataaaatcagaaagggggaaaaagatagggtgcaaaatcacacgtttaaaaacatggggtgcaaaatcgcacaattgacaaaatataggggg 39692036  T
Q  120 aaaaagtgcaattaagcc 137  Q
     |||||||||||||||||    
T  39692037 gaaaagtgcaattaagcc 39692054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 44223815 - 44223745
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaa 76  Q
    ||||||||||||||| | | |||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  44223815 cagcactaaatgtcatgag-accataaaatcagaaaggggaaaaactatagggggcaaaatcgctcgtttaa 44223745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 49284515 - 49284437
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  49284515 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 49284437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 145
Target Start/End: Complemental strand, 6002343 - 6002229
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaa 130  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| ||||||||| |||||||| ||||  |||  |   ||||||||||    
T  6002343 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcacacaattgacaaaagataggggtgaaaagtgcaa 6002244  T
Q  131 ttaagccaaataaaa 145  Q
    |||||||||| ||||    
T  6002243 ttaagccaaaaaaaa 6002229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 49285003 - 49285081
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| ||||||||  || ||| ||||||||||| ||||||||  ||||| |||||||||||||||||||||||    
T  49285003 aaatcagaaagggggaaaaagatggggtgcaaaatcgcttgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 49285081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 6002842 - 6002915
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    |||||||||| ||||||||  ||  || ||||||||||||||||||||  ||||| ||||||||||||||||||    
T  6002842 aaatcagaaagggggaaaaagatgaggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattg 6002915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 6712279 - 6712215
Alignment:
Q  29 taaaatcagaaaaggggaaaactatagggggc-aaaatcgctcgtttaaaactatgggatgcaaa 92  Q
    |||||||  ||| ||||||||||||||||||  ||||||||||||||||||||||||| ||||||    
T  6712279 taaaatcgaaaagggggaaaactatagggggataaaatcgctcgtttaaaactatggggtgcaaa 6712215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 19007821 - 19007774
Alignment:
Q  21 ggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgc 68  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  19007821 ggggaccatcaaatcagaaagagggaaaactatagggggcaaaatcgc 19007774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 50949237 - 50949184
Alignment:
Q  61 aaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactata 114  Q
    |||||||||||||| |||| ||| | ||||||||||||||||||||| ||||||    
T  50949237 aaaatcgctcgttttaaacaatgaggtgcaaaatcgcacaattggcagactata 50949184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 41082963 - 41082908
Alignment:
Q  83 gggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagcca 138  Q
    |||||||||||||||||||||||||||  |||  | |||||||| |||||||||||    
T  41082963 gggatgcaaaatcgcacaattggcaaaagatagggggaaaaagtacaattaagcca 41082908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 50615332 - 50615289
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaagggg 45  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||    
T  50615332 catcagcattaaatgtcatggggaccataaaatcagaaaggggg 50615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 50623160 - 50623117
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaagggg 45  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||    
T  50623160 catcagcattaaatgtcatggggaccataaaatcagaaaggggg 50623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 50615289 - 50615240
Alignment:
Q  88 gcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||||||||||| |||||||||  | | |||||||||||||||||    
T  50615289 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 50615240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 50623117 - 50623068
Alignment:
Q  88 gcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||||||||||| |||||||||  | | |||||||||||||||||    
T  50623117 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 50623068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 8108991 - 8109047
Alignment:
Q  81 atgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||| |||||||||||||||||||||||  |||  | | |||||||||||||||||    
T  8108991 atggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 8109047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 1e-53; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 5 - 146
Target Start/End: Original strand, 10348721 - 10348862
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10348721 cagcactaaatgtcacggggaccataaaattagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattg 10348820  T
Q  105 gcaaactataatga-gaaaaagtgcaattaagccaaataaaat 146  Q
    ||||||||| |||| |||||||||||||||||||||| |||||    
T  10348821 gcaaactat-atgaggaaaaagtgcaattaagccaaaaaaaat 10348862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 8 - 137
Target Start/End: Complemental strand, 48160026 - 48159897
Alignment:
Q  8 cactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggca 107  Q
    |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48160026 cactaaatgtcacggggatcataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggca 48159927  T
Q  108 aactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||  | | |||||||||||||||||    
T  48159926 aactataggggggaaaagtgcaattaagcc 48159897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 27238822 - 27238957
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| ||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  27238822 cagcactaaatgtcatgggaaccataaaatcagaaagggggaaaactatagggagcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattg 27238921  T
Q  105 gcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    ||||||||||  | | |||||||||||||| |||||    
T  27238922 gcaaactatagaggggaaaagtgcaattaaaccaaa 27238957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 40848881 - 40849015
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    |||| |||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  40848881 atcaacactaaatgtcatggggaccataaaatcagaaagggtgaaaactatagggggcaaaatcgcttgtttaaaactatggggtgcaaaatcgcacaat 40848980  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||||||  | | |||||||||||||||||    
T  40848981 tggcaaactatagaggggaaaagtgcaattaagcc 40849015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 22429516 - 22429647
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22429516 atcagcactaaatgtcatggggaccataaaatcagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 22429615  T
Q  103 tggcaaactataatgagaaaaagtgcaattaag 135  Q
    || |||||||| | |||  ||||||||||||||    
T  22429616 tgacaaactat-aggagggaaagtgcaattaag 22429647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 40848652 - 40848521
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    |||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  40848652 cagcgctaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgtaaaatcgcacaattg 40848553  T
Q  105 gcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||| | | | |||||||||||||||||    
T  40848552 gcaaactat-agggggaaaagtgcaattaagcc 40848521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 2 - 138
Target Start/End: Original strand, 47666254 - 47666390
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| |||||||| ||||||    
T  47666254 catcagcactaaatgtcatgggaaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaattgcacaa 47666353  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcca 138  Q
    |||||||||||||  | | ||||||||||||||||||    
T  47666354 ttggcaaactataggggggaaaagtgcaattaagcca 47666390  T

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Target: chr3; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 48160258 - 48160390
Alignment:
Q  8 cactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggca 107  Q
    |||||||||||| ||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48160258 cactaaatgtcatggggatcataaaatcagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggca 48160357  T
Q  108 aactataatgagaaaaagtgcaattaagccaaa 140  Q
    |||||||  | |  |||||||||||||||||||    
T  48160358 aactatagggggggaaagtgcaattaagccaaa 48160390  T

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Target: chr3; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 144
Target Start/End: Complemental strand, 3353260 - 3353121
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||    
T  3353260 catcagtactaaatgtcatggggaccataaaatcagaaagggggaaaactataggggg--aaatcgctcgtttaaaactatggggtgcaaaatcgcacaa 3353163  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagccaaataaa 144  Q
    ||| |||||||| | | | ||||||||||||||||||||||||    
T  3353162 ttgacaaactat-agggggaaaagtgcaattaagccaaataaa 3353121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 24485155 - 24485044
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  24485155 atcagcactaaatgtcatggggaccataaaatcagaaaggggaaaaactatagggggcgaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 24485056  T
Q  103 tggcaaactata 114  Q
    ||||||||||||    
T  24485055 tggcaaactata 24485044  T

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Target: chr3; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 27238599 - 27238488
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    |||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  27238599 atcagcactaaaagtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaat 27238500  T
Q  103 tggcaaactata 114  Q
    ||||||||||||    
T  27238499 tggcaaactata 27238488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 36180688 - 36180577
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    |||| |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36180688 atcaacactaaatgtcatggggaccataaaatcagaaagggggaaaactataggggtcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 36180589  T
Q  103 tggcaaactata 114  Q
    || |||||||||    
T  36180588 tgacaaactata 36180577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 42673111 - 42672977
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||| ||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  42673111 atcagcactaaatgtcatgggggccataaaatcataaagggggaaaactatagggggcaaaatcgatcgtttaaaactatggggtgcaaaatcgcacaat 42673012  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcca 138  Q
    ||||||||||| | | | ||||||||||||||||||    
T  42673011 tggcaaactat-agggggaaaagtgcaattaagcca 42672977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 53688015 - 53687888
Alignment:
Q  10 ctaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  53688015 ctaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggtaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaa 53687916  T
Q  110 ctataatgagaaaaagtgcaattaagcc 137  Q
    |||||  | | |||||||||||||||||    
T  53687915 ctataggggggaaaagtgcaattaagcc 53687888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 145
Target Start/End: Original strand, 24485381 - 24485521
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||| ||||| |||||||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  24485381 atcagcactaa-tgtcatggggaccataaaattagaaagggggaatactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaat 24485479  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagccaaataaaa 145  Q
    ||||||||||||  ||| |||||||||||||||||||| ||||    
T  24485480 tggcaaactatagggag-aaaagtgcaattaagccaaaaaaaa 24485521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 3353471 - 3353582
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  3353471 catcagcactaaatgtcatggggaccataaaatcagaaagggggaaa-ctatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaa 3353569  T
Q  102 ttggcaaactata 114  Q
    |||||||||||||    
T  3353570 ttggcaaactata 3353582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 42673221 - 42673352
Alignment:
Q  8 cactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggca 107  Q
    |||||||| | | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  42673221 cactaaatctgatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgaca 42673320  T
Q  108 aactataatgagaaaaagtgcaattaagccaaa 140  Q
    |||||| | | | ||||||||||||||||||||    
T  42673321 aactat-agggggaaaagtgcaattaagccaaa 42673352  T

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Target: chr3; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 26007541 - 26007686
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||   |||||||||| |||||||    
T  26007541 cagcactaaatgttatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaattatgaagtgcaaaatcgtacaattg 26007640  T
Q  105 gcaaactataatgagaaaaagtgcaattaagcc--aaataaaatat 148  Q
    ||||||||||  | |||||||||||||||| ||  |||||||||||    
T  26007641 gcaaactatagggggaaaaagtgcaattaaacctaaaataaaatat 26007686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 22429292 - 22429159
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||| |||||||||    
T  22429292 atcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggggacaaaatcgctcgtttaaaactattgggtgcaaagtcgcacaat 22429193  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagc 136  Q
    ||||||| ||||  |   ||||||||||||||||    
T  22429192 tggcaaaatataggggagaaaagtgcaattaagc 22429159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 36180912 - 36181049
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| ||||| |||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||| | |||||||||||||||     
T  36180912 cagcactaaatgtcatggggatcataaaatcagaaaagggaaaaactataggggaaaaaatcgctcgtttaaaactatggggtacaaaatcgcacaatta 36181011  T
Q  105 gcaaactataatgagaaaaagtgcaattaagccaaata 142  Q
     |||||||||  ||| ||||||||||||||||| ||||    
T  36181012 acaaactatagggaggaaaagtgcaattaagcctaata 36181049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 44008101 - 44007964
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| ||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||  |||||||| | |||||||    
T  44008101 atcagcactaaatgtcatgggaaccataaaatcagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactataagatgcaaatttgcacaat 44008002  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    ||  ||||||||  ||| ||||||||||||||||||||    
T  44008001 tgaaaaactatagggaggaaaagtgcaattaagccaaa 44007964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 53766296 - 53766160
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| || ||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  53766296 atcagcactaaatgtcatggagaccataaaatcaaaaatggggaaa-ctatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 53766198  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    || |||||||||    |||||||||||||||| |||||    
T  53766197 tgacaaactataggaggaaaaagtgcaattaaaccaaa 53766160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 26007315 - 26007204
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| ||||||||||||||||||||   |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  26007315 atcagcactaaatgtcatggggaccataaaatcagaaagatggaaaactatagagggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 26007216  T
Q  103 tggcaaactata 114  Q
    || |||||||||    
T  26007215 tgacaaactata 26007204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 53688223 - 53688359
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    |||| |||||||||||| | | | |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||    
T  53688223 atcaacactaaatgtcatgagaatcataaaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatggagtgcaaaatcgcacaat 53688322  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    ||||||||||| | | || |||||||||||||||||||    
T  53688323 tggcaaactat-aggggagaaagtgcaattaagccaaa 53688359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 10348613 - 10348480
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||    
T  10348613 atcagcactaaatgtcatggggactataaaatcagaaaggggaaaaactataggggacaaaatcgctcgtttaaaattatgggatgcaaaattgaacaat 10348514  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagc 136  Q
    || |||||||||  |   ||||||||||||||||    
T  10348513 tgacaaactatacgggagaaaagtgcaattaagc 10348480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 42456121 - 42456217
Alignment:
Q  8 cactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgg 105  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42456121 cactaaatgtcatggggaccataaaatcagaaagggggaaa-ctatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgg 42456217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 44008323 - 44008457
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||| ||||||||| | |||||||||||||||||| || ||||||||||||||| ||||| ||||||||||||||||| | |||||||| |||||||||    
T  44008323 cagcattaaatgtcacgaggaccataaaatcagaaagggagaaaactatagggggaaaaattgctcgtttaaaactatgaggtgcaaaattgcacaattg 44008422  T
Q  105 gcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    ||||||||| | ||  ||||||||||||||||||||    
T  44008423 gcaaactat-aggatgaaaagtgcaattaagccaaa 44008457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 148
Target Start/End: Complemental strand, 47666046 - 47665900
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    ||||| |||||||||||| | | |||||||||||| ||| ||||||||||||||| || |||||| ||||||| |||| ||| | |||||||||||||||    
T  47666046 catcaccactaaatgtcatgagaaccataaaatcaaaaagggggaaaactataggtggtaaaatcactcgttttaaacaatgaggtgcaaaatcgcacaa 47665947  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagccaaataaaatat 148  Q
    ||| |||||||||| | ||||||||||||||||||| || |||||||    
T  47665946 ttgacaaactataaggggaaaaagtgcaattaagcctaaaaaaatat 47665900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 8314130 - 8314011
Alignment:
Q  20 aggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgag 119  Q
    ||||| ||||||||||||||| ||||||||  |||||| |||||||||| |||||||||  || || |||||||||||||||||| |||| ||||  |      
T  8314130 agggggccataaaatcagaaagggggaaaatgatagggtgcaaaatcgcacgtttaaaaacattgggtgcaaaatcgcacaattgacaaaatatagggga 8314031  T
Q  120 aaaaagtgcaattaagccaa 139  Q
     |||||||||||||||||||    
T  8314030 gaaaagtgcaattaagccaa 8314011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 138
Target Start/End: Original strand, 21896432 - 21896565
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    ||||| |||||||| |||  ||||||||||||||| ||| ||| ||||  || ||| |||||||||||||| |||||| ||||| |||||||||||||||    
T  21896432 catcatcactaaatatca--gggaccataaaatcaaaaatgggaaaaatgatggggtgcaaaatcgctcgtataaaaccatggggtgcaaaatcgcacaa 21896529  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcca 138  Q
    ||| |||| ||| | | |||||| |||||||||||||    
T  21896530 ttgacaaaatat-aggggaaaaaatgcaattaagcca 21896565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 1928386 - 1928460
Alignment:
Q  35 cagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||||||||  |||||| |||||| | ||||||||||| |||||| |||||||||||||||||||||||    
T  1928386 cagaaaaggggaaaaggatagggtgcaaaaccactcgtttaaaaatatggggtgcaaaatcgcacaattggcaaa 1928460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 53766511 - 53766633
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||             |||||||||| || |||||||| |||||||    
T  53766511 atcagcactaaatgtcatggggaccataaaatcagaaa-ggggaaaaatatagggggag-----------ttaaaactatagggtgcaaaattgcacaat 53766598  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    | ||||||||||  | | |||||||||||||||||    
T  53766599 ttgcaaactataggggggaaaagtgcaattaagcc 53766633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 42455903 - 42455852
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactata 54  Q
    |||| ||||||| |||| |||||||||||||||||||| |||||||||||||    
T  42455903 atcatcactaaacgtcatggggaccataaaatcagaaagggggaaaactata 42455852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 42455853 - 42455790
Alignment:
Q  74 taaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||| ||  ||||||||||||||||| |||||||||  | | |||||||||||||||||    
T  42455853 taaaactatagggggcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 42455790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 20969023 - 20969076
Alignment:
Q  87 tgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    |||||||||||||||||||||||  |||  | | ||||||||||||||||||||    
T  20969023 tgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccaaa 20969076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 106; Significance: 4e-53; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 185197 - 185330
Alignment:
Q  6 agcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgg 105  Q
    |||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  185197 agcactaaatgtcatggggaccataaaatcagaaagagggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgg 185296  T
Q  106 caaactataatgagaaaaagtgcaattaagccaa 139  Q
    |||||||||  ||| |||||||||||||||||||    
T  185297 caaactatagggaggaaaagtgcaattaagccaa 185330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 184971 - 184840
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||| |||    
T  184971 cagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggtggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacagttg 184872  T
Q  105 gcaaactata-atgagaaaaagtgcaattaagc 136  Q
     ||||||||| | ||| ||||||||||||||||    
T  184871 acaaactatagaggag-aaaagtgcaattaagc 184840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 7e-52; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 12498847 - 12498982
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  12498847 catcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgcttgtttaaaactatggggtgcaaaatcgcacaa 12498946  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||||||||  | | |||||||||||||||||    
T  12498947 ttggcaaactataggggggaaaagtgcaattaagcc 12498982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 26571084 - 26571218
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26571084 atcagcactaaatgtcatggggaccataaaatcagaaaggaggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 26571183  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||||||  | | |||||||||||||||||    
T  26571184 tggcaaactataggggggaaaagtgcaattaagcc 26571218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 19514660 - 19514549
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19514660 atcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 19514561  T
Q  103 tggcaaactata 114  Q
    ||||||||||||    
T  19514560 tggcaaactata 19514549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 21207358 - 21207229
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21207358 cagcactaaatgtcatggggaccataaaatcagaaagggtgaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattg 21207259  T
Q  105 gcaaactataatgagaaaaagtgcaattaa 134  Q
    ||||||||||  | | ||||||||||||||    
T  21207258 gcaaactataggggggaaaagtgcaattaa 21207229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 2817283 - 2817152
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    ||||| |||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2817283 catcaacactaaatgtcatggggaccataaaatcagaaa-ggggaaaaatatagggggcaaaatcgctcgtttaaaattatgggatgcaaaatcgcacaa 2817185  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaa 134  Q
    |||||||||||||  ||| ||||||||||||||    
T  2817184 ttggcaaactatagggaggaaaagtgcaattaa 2817152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 12498701 - 12498567
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| ||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12498701 catcagcactaaatgtcatgga-accataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaa 12498603  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||||||||  | | |||||||||||||||||    
T  12498602 ttggcaaactataggggggaaaagtgcaattaagcc 12498567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 34147435 - 34147564
Alignment:
Q  8 cactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggca 107  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||| ||    
T  34147435 cactaaatgtcacggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacgaggtgcaaaatcgcacaattgaca 34147534  T
Q  108 aactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||  | |||||||||||||||||||    
T  34147535 aactatagggggaaaaagtgcaattaagcc 34147564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 3888581 - 3888713
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  3888581 catcagcattaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaa 3888680  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaa 134  Q
    |||||||| |||||   | ||||||||||||||    
T  3888681 ttggcaaattataagagggaaaagtgcaattaa 3888713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 34147274 - 34147141
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  34147274 catcagcactaaatgtcacggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacggggtgcaaaatcgcacaa 34147175  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||  |||||||||   | |||||||||||||||||    
T  34147174 ttgataaactataa--gggaaaagtgcaattaagcc 34147141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 43464114 - 43464245
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  43464114 cagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattg 43464213  T
Q  105 gcaaactataatgagaaaaagtgcaattaagcc 137  Q
     |||||||| | | | |||||||||||||||||    
T  43464214 acaaactat-agggggaaaagtgcaattaagcc 43464245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 3888373 - 3888237
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    ||||| |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  3888373 catcatcactaaatgtcatggg-accataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaa 3888275  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagccaa 139  Q
    |||||||||||||  | | ||| |||||||||||||||    
T  3888274 ttggcaaactataggggggaaatgtgcaattaagccaa 3888237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 22729360 - 22729492
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    |||| ||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22729360 atcaacactaaatgtcatagggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 22729459  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagc 136  Q
    ||||||| ||| | | | ||||||||||||||||    
T  22729460 tggcaaattat-agggggaaaagtgcaattaagc 22729492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 26570861 - 26570724
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    |||| |||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  26570861 cagcgctaaatgtcatggggaccataaaatcagaaagggggaaaactataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattg 26570762  T
Q  105 gcaaactataatgagaaaaagtgcaattaagccaaata 142  Q
     |||||||||  | | ||||||| ||||||||| ||||    
T  26570761 acaaactataggggggaaaagtgtaattaagcctaata 26570724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 19514885 - 19515017
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  19514885 cagcactaaatgtcatgggaaccataaaatcagaaagggggaaaactatagggggcaaaataactcgtttaaaactatggggtgcaaaatcgcacaattg 19514984  T
Q  105 gcaaactataatgagaaaaagtgcaattaagcc 137  Q
     |||||||||  | | |||||||||||||||||    
T  19514985 acaaactataggggggaaaagtgcaattaagcc 19515017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 41072133 - 41072245
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||    
T  41072133 catcagcactaaatgtcatggggaccataaaattagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgtacaa 41072232  T
Q  102 ttggcaaactata 114  Q
    ||| |||||||||    
T  41072233 ttgacaaactata 41072245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 10098861 - 10098991
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||| ||||||||||| ||||||||||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||    
T  10098861 atcagtactaaatgtcatggggaccataaaatcagaaagagggaaaactataggggataaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 10098960  T
Q  103 tggcaaactataatgagaaaaagtgcaattaa 134  Q
    || |||||||| | ||| ||||||||||||||    
T  10098961 tgacaaactat-aggaggaaaagtgcaattaa 10098991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 11316896 - 11317025
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  11316896 cagcactaaatgtcatggggaccataaaatcagaaagagggaaaactatagggggcaaaatcgctcatttaaaacaatggggtgcaaaatcgcacaattg 11316995  T
Q  105 gcaaactataatgagaaaaagtgcaattaa 134  Q
    ||||| || |  |  |||||||||||||||    
T  11316996 gcaaagtacagaggaaaaaagtgcaattaa 11317025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 30402010 - 30401879
Alignment:
Q  8 cactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggca 107  Q
    |||||||| ||| |||||||||||||||| ||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||    
T  30402010 cactaaatatcatggggaccataaaatcataaa-ggggaaaattatagggggcaaaatcgctagtttaaaactatgggatgcaaaattgtacaattggca 30401912  T
Q  108 aactataatgagaaaaagtgcaattaagccaaa 140  Q
    |||||||  ||| |||||||||||||| |||||    
T  30401911 aactatagagaggaaaagtgcaattaaaccaaa 30401879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 22729138 - 22729006
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||   |||||||||||||||||     
T  22729138 cagcactaaatgtcatggggaccataaaatcagaaagggggaaaactata-ggggcaaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaattt 22729040  T
Q  105 gcaaactataatgagaaaaagtgcaattaagccaa 139  Q
     |||||||| | | | |||||||||||||||||||    
T  22729039 acaaactat-agggggaaaagtgcaattaagccaa 22729006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 37780664 - 37780799
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||| ||| | ||||||||||||||||    
T  37780664 atcagcactaaatgtcatggggaccataaaatcagaaagggggaaa-ctatagggg-caaaatcgctcgtttaaaacaatgaggtgcaaaatcgcacaat 37780761  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    | ||||||||||  | | |||||| |||||||||||||    
T  37780762 tagcaaactataggggggaaaagtacaattaagccaaa 37780799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 43463863 - 43463759
Alignment:
Q  29 taaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgc 128  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | | ||||||||    
T  43463863 taaaatcagaaagggagaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataa-ggggaaaagtgc 43463765  T
Q  129 aattaa 134  Q
    ||||||    
T  43463764 aattaa 43463759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 25940637 - 25940521
Alignment:
Q  21 ggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgaga 120  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||  |  |    
T  25940637 ggggaccataaaatcagaaagggtgaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggaa 25940538  T
Q  121 aaaagtgcaattaagcc 137  Q
    |||| ||||||||||||    
T  25940537 aaaaatgcaattaagcc 25940521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 37610544 - 37610649
Alignment:
Q  8 cactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggca 107  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||||||||| |||    
T  37610544 cactaaatgtcatggggaccataaaatcagaaagggggaaa-ctatagggggcaaaatcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagca 37610642  T
Q  108 aactata 114  Q
    |||||||    
T  37610643 aactata 37610649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 25940956 - 25941076
Alignment:
Q  26 ccataaaatcagaaaagggg-aaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaa 124  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||    | ||||    
T  25940956 ccataaaatcagaaaggggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcataattaacaaactataggagggaaaa 25941055  T
Q  125 gtgcaattaagccaaataaaa 145  Q
    |||||||||||| ||| ||||    
T  25941056 gtgcaattaagcaaaaaaaaa 25941076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 37780413 - 37780320
Alignment:
Q  43 gggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| | | | |||||||||||||||||    
T  37780413 gggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactat-agggggaaaagtgcaattaagcc 37780320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 2817495 - 2817631
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||| ||||||||||| |||||||||||||| ||||   ||||||  ||||||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  2817495 catcagtactaaatgtcatggggaccataaaattagaaggagggaaat-tatagggagcaaaatcgctcgtttaaaactattggatgtaaaatcgcacaa 2817593  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    || ||||||||| | | | ||||||||||||||| ||||    
T  2817594 ttcgcaaactat-agggggaaaagtgcaattaagtcaaa 2817631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 37610295 - 37610202
Alignment:
Q  43 gggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| | | | |||||||||||||||||    
T  37610295 gggaaaactataaggggcaaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactat-agggggaaaagtgcaattaagcc 37610202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 54 - 139
Target Start/End: Complemental strand, 10098602 - 10098517
Alignment:
Q  54 agggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagccaa 139  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    |||||||||||||||||||||    
T  10098602 agggggcaaaatcgctcgtttaaaactataggatgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaagccaa 10098517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 25940885 - 25940955
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtt 73  Q
    |||||||||| || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25940885 atcagcactatatatcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtt 25940955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 11316809 - 11316737
Alignment:
Q  42 ggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactata 114  Q
    |||||||||||||||||||||||| |||||||||||| ||| ||||||||||| | |||||||||||||||||    
T  11316809 ggggaaaactatagggggcaaaattgctcgtttaaaattataggatgcaaaattgtacaattggcaaactata 11316737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 31 - 139
Target Start/End: Original strand, 18817559 - 18817667
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaa 130  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||  |||  |   ||||||||||    
T  18817559 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 18817658  T
Q  131 ttaagccaa 139  Q
    |||||||||    
T  18817659 ttaagccaa 18817667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 42919421 - 42919305
Alignment:
Q  20 aggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgag 119  Q
    |||| |||||||||||||||| ||| ||||  |||||| ||||||||||||||||||||  ||| | || |||||||||||||||| ||| ||| | | |    
T  42919421 agggaaccataaaatcagaaaggggaaaaatgatagggtgcaaaatcgctcgtttaaaaacatgtggtgaaaaatcgcacaattggaaaaatat-agggg 42919323  T
Q  120 aaaaagtgcaattaagcc 137  Q
    |||||| |||||||||||    
T  42919322 aaaaagagcaattaagcc 42919305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 18817058 - 18816980
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| ||||||||  || ||  ||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  18817058 aaatcagaaagggggaaaaagatgggatgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 18816980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 11351405 - 11351453
Alignment:
Q  61 aaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||    
T  11351405 aaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaa 11351453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 11350913 - 11350836
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||| ||| ||||||||  || ||| |||||||||||||||||||| |||||| |||||||| ||||||||||||||    
T  11350913 aaatcaaaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaat-gcacaattggcaaa 11350836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 10098639 - 10098602
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaa 40  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  10098639 atcatcactaaatgtcatggggaccataaaatcagaaa 10098602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 16466744 - 16466796
Alignment:
Q  85 gatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||||||||||||| ||||| ||||  | | |||||||||||||||||    
T  16466744 gatgcaaaatcgcacaattagcaaaatataggggggaaaagtgcaattaagcc 16466796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 26020506 - 26020450
Alignment:
Q  81 atgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||| ||||||||||||||||| |||||  |||  ||| |||||||||||||||||    
T  26020506 atggggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgcaattaagcc 26020450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 2e-49; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 33974219 - 33974354
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33974219 atcagcactaaatgtcatggagaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 33974318  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcca 138  Q
    ||||||||||||  | | |||| |||||||||||||    
T  33974319 tggcaaactataggggggaaaaatgcaattaagcca 33974354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 32733916 - 32734053
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||| ||| ||| |||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32733916 atcagcactaaatatcatgggaaccataaaatcagaaagggagaaaattatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 32734015  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    ||||||||||||  ||| |||||||||||||| |||||    
T  32734016 tggcaaactatagggaggaaaagtgcaattaaaccaaa 32734053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 7654467 - 7654602
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||    
T  7654467 catcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaagtcactcgtttaaaactatggggtgcaaaatcgcacaa 7654566  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||| |||||||||  | | |||||||||||||||||    
T  7654567 ttgacaaactataggggggaaaagtgcaattaagcc 7654602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 10087779 - 10087913
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| | | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10087779 atcagcactaaatgtcatgag-accataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 10087877  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcca 138  Q
    |||||||||| |  | | ||||||||||||||||||    
T  10087878 tggcaaactaaaggggggaaaagtgcaattaagcca 10087913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 22755010 - 22755142
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||    
T  22755010 atcagcactaaatgtcatggggacaataaaatcagaaa-ggggaaaactatagggggcaaaatcgctcgtttaaaactatgtggtgcaaaatcgcataat 22755108  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagc 136  Q
    || |||||||||| | | ||||||||||||||||    
T  22755109 tgacaaactataaaggggaaaagtgcaattaagc 22755142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 5 - 145
Target Start/End: Original strand, 22684280 - 22684419
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||| | ||||||||||||||| ||||||||| ||||||||    
T  22684280 cagcactaaatatcatggggaccataaaatcagaaaggggaaaaactatagggggcaaaatcgtttgtttaaaactatggggtgcaaaatcacacaattg 22684379  T
Q  105 gcaaactataatgagaaaaagtgcaattaagccaaataaaa 145  Q
    ||||||||||| | | |||||||||||||||||||| ||||    
T  22684380 gcaaactataa-ggggaaaagtgcaattaagccaaaaaaaa 22684419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 5 - 145
Target Start/End: Complemental strand, 22754788 - 22754649
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||| | ||||||||||||||| ||||||||| ||||||||    
T  22754788 cagcactaaatatcatggggaccataaaatcagaaaggggaaaaactatagggggcaaaatcgtttgtttaaaactatggggtgcaaaatcacacaattg 22754689  T
Q  105 gcaaactataatgagaaaaagtgcaattaagccaaataaaa 145  Q
    ||||||||||| | | |||||||||||||||||||| ||||    
T  22754688 gcaaactataa-ggggaaaagtgcaattaagccaaaaaaaa 22754649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 2354543 - 2354406
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||| |||||||||||||| |||| |||||||||||||||| ||||    
T  2354543 catcagcactaaatgtcatgggaaccataaaatcagaaagggggaaaactatagggggaaaaatcgctcgttttaaacaatgggatgcaaaatcgtacaa 2354444  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    |||  ||||||||  | |||||| |||||||||||||||    
T  2354443 ttgaaaaactatagggggaaaaa-tgcaattaagccaaa 2354406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 13176753 - 13176617
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||  ||||||| |||||||| |||||    
T  13176753 atcagcactaaatgtcacggggaccataaaatcagaaagtgggaaaactatagggggcaaaatcgctcatttaaaatcatgggatacaaaatcgtacaat 13176654  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    ||||||||||||  || |||||| ||||||| ||||||    
T  13176653 tggcaaactataggga-aaaaagggcaattatgccaaa 13176617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 29074291 - 29074403
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| ||| | |||||||||||||| || ||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  29074291 catcagcactaaatgtcatgggaatcataaaatcagaaagggcgaaaactataggggggaaaatcgctcgttttaaactatggggtgcaaaatcgcacaa 29074390  T
Q  102 ttggcaaactata 114  Q
    |||||||||||||    
T  29074391 ttggcaaactata 29074403  T

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Target: chr6; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 29079055 - 29079167
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| ||| | |||||||||||||| || ||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  29079055 catcagcactaaatgtcatgggaatcataaaatcagaaagggcgaaaactataggggggaaaatcgctcgttttaaactatggggtgcaaaatcgcacaa 29079154  T
Q  102 ttggcaaactata 114  Q
    |||||||||||||    
T  29079155 ttggcaaactata 29079167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 29106864 - 29106976
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||||||||||||| ||| | |||||||||||||| || ||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  29106864 catcagcactaaatgtcatgggaatcataaaatcagaaagggcgaaaactataggggggaaaatcgctcgttttaaactatggggtgcaaaatcgcacaa 29106963  T
Q  102 ttggcaaactata 114  Q
    |||||||||||||    
T  29106964 ttggcaaactata 29106976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 32733691 - 32733580
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| ||| |||||||||||||||| ||| ||||||||||| |||||||| |||||||||||||||||||||||||||||| | |||    
T  32733691 atcagcactaaatgtcatgggaaccataaaatcagaaaggggaaaaactataggaggcaaaattgctcgtttaaaactatgggatgcaaaatcgtataat 32733592  T
Q  103 tggcaaactata 114  Q
    ||||||||||||    
T  32733591 tggcaaactata 32733580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 2354730 - 2354841
Alignment:
Q  2 catcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaa 101  Q
    |||||||| ||||||||| ||| ||||||||||||  || |||||||||||||||||||||||| |||||||| |||| ||||| |||||||||||||||    
T  2354730 catcagcattaaatgtcatgggaaccataaaatcatgaa-ggggaaaactatagggggcaaaatggctcgttttaaacaatggggtgcaaaatcgcacaa 2354828  T
Q  102 ttggcaaactata 114  Q
    ||| |||||||||    
T  2354829 ttgacaaactata 2354841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 13176984 - 13177087
Alignment:
Q  11 taaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaac 110  Q
    ||||||||| |||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||| | || |||||| |||||||| || ||    
T  13176984 taaatgtcatggggaccataaaatcagaaagggggacaactataaggggcaaaatcgctcgtttaaaactatgaggtgtaaaatctcacaattgacatac 13177083  T
Q  111 tata 114  Q
    ||||    
T  13177084 tata 13177087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 140
Target Start/End: Complemental strand, 33829096 - 33828987
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaa 130  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||  |||  |   ||||||||||    
T  33829096 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 33828997  T
Q  131 ttaagccaaa 140  Q
    ||||||||||    
T  33828996 ttaagccaaa 33828987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 33973991 - 33973887
Alignment:
Q  8 cactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggca 107  Q
    |||||||||||| |||||||||||||| |||||  || ||||||||||||| ||||||||||||| |||||||||    | ||||||||||||| || ||    
T  33973991 cactaaatgtcatggggaccataaaattagaaa--ggaaaaactataggggacaaaatcgctcgtgtaaaactataaagtacaaaatcgcacaactgaca 33973894  T
Q  108 aactata 114  Q
    |||||||    
T  33973893 aactata 33973887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 33829584 - 33829662
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  33829584 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 33829662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 145
Target Start/End: Original strand, 18242160 - 18242218
Alignment:
Q  87 tgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagccaaataaaa 145  Q
    |||||||||||||||||||||||  |||  || ||||| ||||||||||||||| ||||    
T  18242160 tgcaaaatcgcacaattggcaaaagatagggaaaaaaaatgcaattaagccaaaaaaaa 18242218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 38615 - 38749
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| || ||| ||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||    
T  38615 atcagcactaaatgtcatggagactataaaatcagaaagggggaaaactatagggggcaaaatcgttcgtttaagactatggggtgcaaaatcgcacaat 38714  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||||||  | |||||||||||||||||||    
T  38715 tggcaaactatagggggaaaaagtgcaattaagcc 38749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 38385 - 38284
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    ||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38385 atcagcactaaatgtcatggggaccataaaatcagaaagagggaaaactatagggggcaaaatcgctcatttaaaactatgggatgcaaaatcgcacaat 38286  T
Q  103 tg 104  Q
    ||    
T  38285 tg 38284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 92; Significance: 1e-44; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 10040 - 9905
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactat-gggatgcaaaatcgcacaa 101  Q
    |||| |||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||    
T  10040 atcaacactaaatgttatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggggtgaaaaatcgcacaa 9941  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    |||||||||||||  | |||||||||||||||||||    
T  9940 ttggcaaactatagggggaaaaagtgcaattaagcc 9905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 10268 - 10332
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcg 67  Q
    |||| |||||||||| | |||||||||||||||||||| |||||||||||||||| |||||||||    
T  10268 atcaacactaaatgttatggggaccataaaatcagaaagggggaaaactatagggtgcaaaatcg 10332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 10311 - 10376
Alignment:
Q  75 aaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagccaaata 142  Q
    |||||||| || |||||||||| |||||||||||||||||  | | |||||||| |||||||| ||||    
T  10311 aaaactatagggtgcaaaatcggacaattggcaaactata--ggggaaaagtgctattaagcctaata 10376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 50426 - 50563
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactat-gggatgcaaaatcgcacaa 101  Q
    ||||||| ||||||||| |||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||    
T  50426 atcagcattaaatgtcatggggaccataaaatcagaaagggggtaaactatagggggcaaaattgctcgtttaaaactatgggggtgcaaaatcgcacaa 50525  T
Q  102 ttggcaaactataatgagaaaaagtgcaattaagccaaa 140  Q
    |||||||||||| | | | ||||||||||||||||||||    
T  50526 ttggcaaactat-agggggaaaagtgcaattaagccaaa 50563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 50206 - 50096
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||    
T  50206 atcagcactaaatgtcatagggaccataaaatcagaaa-ggggaaaactacagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaat 50108  T
Q  103 tggcaaactata 114  Q
    || |||||||||    
T  50107 tgacaaactata 50096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 19752 - 19621
Alignment:
Q  5 cagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattg 104  Q
    ||||| ||||||||| |||||||||||||| ||||| |||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19752 cagcattaaatgtcatggggaccataaaattagaaaggggagaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattg 19653  T
Q  105 gcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||| ||| | |||| ||||||||||||    
T  19652 gcaaactat-atggggaaaattgcaattaagcc 19621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 19964 - 20097
Alignment:
Q  3 atcagcactaaatgtcaaggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaat 102  Q
    |||| ||||||||||||  ||||||||||||||| |||||||| |||||||||||||||||||||   |||||||||||||||  |||||||||||||||    
T  19964 atcaacactaaatgtcatagggaccataaaatca-aaaagggggaaactatagggggcaaaatcgtcagtttaaaactatggggggcaaaatcgcacaat 20062  T
Q  103 tggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    || |||||||||| | | |||||||||||||||||    
T  20063 tgacaaactataagggggaaaagtgcaattaagcc 20097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 6743 - 6821
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 109  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  6743 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 6821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 6258 - 6150
Alignment:
Q  31 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaa 130  Q
    |||||||||| ||||||||  || ||| |||||||||||| ||||||| |||||| || |||||||||||||| |||||  |||  |   ||||||||||    
T  6258 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcatttaaaaatatggggtgtaaaatcgcacaattagcaaaagatagaggtgaaaagtgcaa 6159  T
Q  131 ttaagccaa 139  Q
    |||||||||    
T  6158 ttaagccaa 6150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 439199 - 439253
Alignment:
Q  83 gggatgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagcc 137  Q
    ||||||||||||||||||||| |||||  |||| | |||||||||||||||||||    
T  439199 gggatgcaaaatcgcacaattagcaaaagataaggggaaaaagtgcaattaagcc 439253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 1424 - 1476
Alignment:
Q  87 tgcaaaatcgcacaattggcaaactataatgagaaaaagtgcaattaagccaa 139  Q
    |||||||||||||||||||||||  |||  | |||||||||||||||||||||    
T  1424 tgcaaaatcgcacaattggcaaaagatagggggaaaaagtgcaattaagccaa 1476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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