View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6344_low_10 (Length: 318)
Name: NF6344_low_10
Description: NF6344
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6344_low_10 |
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Alignment Details
Target: chr6 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 211 - 305
Target Start/End: Original strand, 21007464 - 21007558
Alignment:
| Q |
211 |
ccaaaggaggaatctgatcaaaggaaatcatcggttctgcaataaacatcaacataggtttcaaataaaataaattcattggggagtaggtgatg |
305 |
Q |
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| T |
21007464 |
ccaaaggaggaatctgatcaaaggaaatcatcagttctgcaataaacatcaacataggtttcaaataaaataaattcattgaggagtaggagatg |
21007558 |
T |
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Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 21007429 - 21007469
Alignment:
| Q |
11 |
atcatcaataaacaaccctgatgagtgagatcagcccaaag |
51 |
Q |
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| T |
21007429 |
atcaccaataaacaaccctgatgagtgagatcagcccaaag |
21007469 |
T |
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