View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6349_low_7 (Length: 317)

Name: NF6349_low_7
Description: NF6349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6349_low_7
NF6349_low_7
[»] chr1 (15 HSPs)
chr1 (65-215)||(9553062-9553212)
chr1 (114-195)||(30050327-30050408)
chr1 (112-192)||(3450519-3450599)
chr1 (95-162)||(8068964-8069030)
chr1 (121-160)||(34826831-34826870)
chr1 (105-162)||(3048204-3048261)
chr1 (125-162)||(28620443-28620480)
chr1 (106-162)||(3602863-3602919)
chr1 (126-166)||(5133303-5133343)
chr1 (124-192)||(12238582-12238650)
chr1 (106-164)||(10018722-10018780)
chr1 (106-163)||(27900638-27900695)
chr1 (127-160)||(38951156-38951189)
chr1 (87-164)||(40967346-40967423)
chr1 (126-162)||(46500826-46500862)
[»] chr5 (11 HSPs)
chr5 (88-156)||(2825394-2825462)
chr5 (124-163)||(30118491-30118530)
chr5 (87-162)||(8407227-8407302)
chr5 (124-166)||(3709605-3709647)
chr5 (106-192)||(24444397-24444483)
chr5 (107-152)||(655436-655481)
chr5 (114-195)||(28297484-28297565)
chr5 (118-162)||(12403095-12403139)
chr5 (124-160)||(22579537-22579573)
chr5 (124-160)||(27554349-27554385)
chr5 (88-164)||(35293839-35293915)
[»] chr7 (10 HSPs)
chr7 (114-160)||(29196780-29196826)
chr7 (106-162)||(1052399-1052455)
chr7 (126-192)||(5358246-5358312)
chr7 (114-160)||(40352031-40352077)
chr7 (126-162)||(39608612-39608648)
chr7 (128-171)||(23474548-23474591)
chr7 (88-163)||(34703630-34703704)
chr7 (106-163)||(1247517-1247574)
chr7 (106-163)||(5362466-5362523)
chr7 (126-162)||(5429528-5429564)
[»] chr8 (10 HSPs)
chr8 (87-162)||(29911607-29911682)
chr8 (104-162)||(42442744-42442802)
chr8 (115-163)||(2987175-2987222)
chr8 (114-166)||(28802310-28802362)
chr8 (124-171)||(21600439-21600486)
chr8 (104-163)||(41302648-41302707)
chr8 (128-166)||(41303178-41303216)
chr8 (106-163)||(21601926-21601983)
chr8 (112-160)||(12530820-12530868)
chr8 (112-160)||(41616666-41616714)
[»] chr6 (6 HSPs)
chr6 (106-165)||(21020870-21020929)
chr6 (99-160)||(34937441-34937502)
chr6 (106-161)||(34806627-34806682)
chr6 (137-171)||(22260413-22260447)
chr6 (124-201)||(21021085-21021162)
chr6 (129-157)||(26293585-26293613)
[»] chr4 (11 HSPs)
chr4 (128-171)||(40407659-40407702)
chr4 (124-163)||(4161659-4161698)
chr4 (88-163)||(40317794-40317869)
chr4 (88-163)||(40327868-40327943)
chr4 (121-163)||(14945385-14945427)
chr4 (106-163)||(12034401-12034458)
chr4 (114-163)||(27146441-27146490)
chr4 (126-163)||(46804794-46804831)
chr4 (106-163)||(48158190-48158247)
chr4 (88-163)||(17753259-17753335)
chr4 (137-201)||(46217200-46217264)
[»] chr3 (7 HSPs)
chr3 (121-162)||(17572033-17572074)
chr3 (139-192)||(43838824-43838877)
chr3 (124-192)||(3941812-3941880)
chr3 (121-164)||(1324524-1324567)
chr3 (124-163)||(38989766-38989805)
chr3 (124-163)||(47199744-47199783)
chr3 (114-158)||(43837110-43837154)
[»] chr2 (10 HSPs)
chr2 (126-162)||(33583378-33583414)
chr2 (131-162)||(29488701-29488732)
chr2 (124-163)||(34883935-34883974)
chr2 (108-163)||(43503032-43503087)
chr2 (88-162)||(6788517-6788591)
chr2 (114-163)||(1517567-1517616)
chr2 (114-163)||(7165776-7165825)
chr2 (114-171)||(17604256-17604313)
chr2 (95-171)||(6923867-6923943)
chr2 (140-192)||(29926889-29926941)
[»] scaffold0329 (1 HSPs)
scaffold0329 (127-163)||(6236-6272)


Alignment Details
Target: chr1 (Bit Score: 135; Significance: 2e-70; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 65 - 215
Target Start/End: Complemental strand, 9553212 - 9553062
Alignment:
Q  65 aatagttgtataaatatggaacaaatagtaattttcatctatgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtca 164  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9553212 aatagttgtataaatatagaacaaatagtaatttttatctatgaatatataacgaataatcacaatagttcttcaatgtatcaaacttttaaaatagtca 9553113  T
Q  165 ttcattgagtattttataagtcaaaataatccttaactctaaaatgctctt 215  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9553112 ttgattgagtattttataagtcaaaataatccttaactctaaaatgctctt 9553062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 195
Target Start/End: Original strand, 30050327 - 30050408
Alignment:
Q  114 taacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtcattcattgagtattttataagtcaaaataatc 195  Q
    |||| |||| |||||||| ||||||||||||||| |||||||||||||||  | |||| ||||||| | ||||||| |||||    
T  30050327 taacaaatagtcacaataattcttcaatgtatcataattttaaaatagtctctgattgtgtattttgttagtcaaactaatc 30050408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 192
Target Start/End: Complemental strand, 3450599 - 3450519
Alignment:
Q  112 tataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtcattcattgagtattttataagtcaaaata 192  Q
    |||||||| || |||| |||| |||| ||||||||||||||||||||||||  || |||||  ||||||| ||||||||||    
T  3450599 tataacgattagtcaccatagctctttaatgtatcaaaattttaaaatagttgttgattgaccattttattagtcaaaata 3450519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 162
Target Start/End: Original strand, 8068964 - 8069030
Alignment:
Q  95 attttcatctatgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagt 162  Q
    ||||| ||| |||||| | ||||||||||||||||||||| |||||||||| |||||| |||||||||    
T  8068964 attttaatccatgaatgtgtaacgaataatcacaatagtt-ttcaatgtattaaaattctaaaatagt 8069030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 160
Target Start/End: Original strand, 34826831 - 34826870
Alignment:
Q  121 taatcacaatagttcttcaatgtatcaaaattttaaaata 160  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  34826831 taatcacaatagtccttcaatgtatcaaaattttaaaata 34826870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 3048261 - 3048204
Alignment:
Q  105 atgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagt 162  Q
    |||||||| ||||||||| ||  ||||||| |||||| ||||||||||||||||||||    
T  3048261 atgaatatctaacgaatagtcgtaatagtttttcaatctatcaaaattttaaaatagt 3048204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 28620443 - 28620480
Alignment:
Q  125 cacaatagttcttcaatgtatcaaaattttaaaatagt 162  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  28620443 cacaatagttctttaatgtatcaaaattttaaaatagt 28620480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 3602919 - 3602863
Alignment:
Q  106 tgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagt 162  Q
    ||||||| |||||||||| ||||||| || || ||||||||||| ||||||||||||    
T  3602919 tgaatatgtaacgaataaccacaataattttttaatgtatcaaacttttaaaatagt 3602863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 5133343 - 5133303
Alignment:
Q  126 acaatagttcttcaatgtatcaaaattttaaaatagtcatt 166  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  5133343 acaataattcttcaacgtatcaaaattttaaaatagtcatt 5133303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 12238650 - 12238582
Alignment:
Q  124 tcacaatagttcttcaatgtatcaaaattttaaaatagtcattcattgagtattttataagtcaaaata 192  Q
    |||||||| |||||||| ||||  ||||||||||||||||||| |||| | ||||||| || |||||||    
T  12238650 tcacaataattcttcaacgtattgaaattttaaaatagtcattgattgtgcattttatgagccaaaata 12238582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 10018722 - 10018780
Alignment:
Q  106 tgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtca 164  Q
    ||||||| |||| | || ||||||||||   ||||||||||||||||||||||||||||    
T  10018722 tgaatatgtaaccagtagtcacaatagtctatcaatgtatcaaaattttaaaatagtca 10018780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 27900638 - 27900695
Alignment:
Q  106 tgaatatataacgaataatcacaatagt-tcttcaatgtatcaaaattttaaaatagtc 163  Q
    ||||||||||| ||||| | |||||||| |||| |||||||||||||||||||||||||    
T  27900638 tgaatatataaagaatagttacaatagtctctt-aatgtatcaaaattttaaaatagtc 27900695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 38951189 - 38951156
Alignment:
Q  127 caatagttcttcaatgtatcaaaattttaaaata 160  Q
    ||||| ||||||||||||||||||||||||||||    
T  38951189 caataattcttcaatgtatcaaaattttaaaata 38951156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 40967423 - 40967346
Alignment:
Q  87 aaatagtaattttcatctatgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtca 164  Q
    ||||||| |||||| ||| |||||||  ||||||||  ||||||| | |||||| ||||| ||||| |||||||||||    
T  40967423 aaatagtcattttcgtctctgaatatgcaacgaatagccacaataatccttcaaagtatcgaaattataaaatagtca 40967346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 46500862 - 46500826
Alignment:
Q  126 acaatagttcttcaatgtatcaaaattttaaaatagt 162  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  46500862 acaatagttctacaatatatcaaaattttaaaatagt 46500826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 2825394 - 2825462
Alignment:
Q  88 aatagtaattttcatctatgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaa 156  Q
    |||||||||||| |||| ||||||||||| ||||| | |||||||||||| |||||||| |||||||||    
T  2825394 aatagtaattttgatctctgaatatataatgaatagttacaatagttcttgaatgtatcgaaattttaa 2825462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 163
Target Start/End: Original strand, 30118491 - 30118530
Alignment:
Q  124 tcacaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  30118491 tcacaatagttcttcaatgtatcaaaattttaaaacagtc 30118530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 8407302 - 8407227
Alignment:
Q  87 aaatagtaattttcatctatgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagt 162  Q
    ||||||| ||||||||| || ||| | |||||||||| || | |||||  | ||||||||||||||||||||||||    
T  8407302 aaatagtcattttcatccataaatgtgtaacgaataaccatattagtttctgaatgtatcaaaattttaaaatagt 8407227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 3709647 - 3709605
Alignment:
Q  124 tcacaatagttcttcaatgtatcaaaattttaaaatagtcatt 166  Q
    ||||||||||  |||||| ||||||||||||||||||||||||    
T  3709647 tcacaatagtaattcaatatatcaaaattttaaaatagtcatt 3709605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 192
Target Start/End: Complemental strand, 24444483 - 24444397
Alignment:
Q  106 tgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtcattcattgagtattttataagtcaaaata 192  Q
    ||||||| |||||||||| |||| | |||||||||| |||| |||||||||||| ||  || |||| ||||||| | | ||||||||    
T  24444483 tgaatatttaacgaataaacacacttgttcttcaatatatccaaattttaaaatggtatttgattgtgtattttgttaatcaaaata 24444397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 655481 - 655436
Alignment:
Q  107 gaatatataacgaataatcacaatagttcttcaatgtatcaaaatt 152  Q
    ||||||||||||| || |||||||||||| |||||| |||||||||    
T  655481 gaatatataacgagtagtcacaatagttcgtcaatgcatcaaaatt 655436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 195
Target Start/End: Complemental strand, 28297565 - 28297484
Alignment:
Q  114 taacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtcattcattgagtattttataagtcaaaataatc 195  Q
    |||| |||||||||||||||  |||||| |||||| |||||||||||||  || |||    ||||||| |||||||||||||    
T  28297565 taacaaataatcacaatagtcattcaatatatcaacattttaaaatagttgttgattatacattttattagtcaaaataatc 28297484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 12403095 - 12403139
Alignment:
Q  118 gaataatcacaatagttcttcaatgtatcaaaattttaaaatagt 162  Q
    ||||| ||||||| |||| ||||||||||||||| ||||||||||    
T  12403095 gaatattcacaattgttcatcaatgtatcaaaatattaaaatagt 12403139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 22579573 - 22579537
Alignment:
Q  124 tcacaatagttcttcaatgtatcaaaattttaaaata 160  Q
    |||||||||| | ||||||||||||||||||||||||    
T  22579573 tcacaatagtccatcaatgtatcaaaattttaaaata 22579537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 27554385 - 27554349
Alignment:
Q  124 tcacaatagttcttcaatgtatcaaaattttaaaata 160  Q
    |||||||||| |||||||||||||||||| |||||||    
T  27554385 tcacaatagtccttcaatgtatcaaaattctaaaata 27554349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 35293915 - 35293839
Alignment:
Q  88 aatagtaattttcatctatgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtca 164  Q
    |||||| |||||  ||| |||||||||||||||||  ||||||  | ||||||| |||| |||||| ||||||||||    
T  35293915 aatagtcattttagtctctgaatatataacgaatagccacaatgatccttcaatctatcgaaatttcaaaatagtca 35293839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 29196780 - 29196826
Alignment:
Q  114 taacgaataatcacaatagttcttcaatgtatcaaaattttaaaata 160  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  29196780 taacgaatagtcacaatagtttttcaatgtatcaaaattttaaaata 29196826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 1052399 - 1052455
Alignment:
Q  106 tgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagt 162  Q
    ||||||| |||||||||| ||||||| || || ||||||||||||||||||||||||    
T  1052399 tgaatatgtaacgaataaccacaataattttttaatgtatcaaaattttaaaatagt 1052455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 192
Target Start/End: Original strand, 5358246 - 5358312
Alignment:
Q  126 acaatagttcttcaatgtatcaaaattttaaaatagtcattcattgagtattttataagtcaaaata 192  Q
    |||||||| |||||||||||||||||||||||||||||  | |||| ||| | ||| ||||||||||    
T  5358246 acaatagtccttcaatgtatcaaaattttaaaatagtctctgattgtgtactctattagtcaaaata 5358312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 40352031 - 40352077
Alignment:
Q  114 taacgaataatcacaatagttcttcaatgtatcaaaattttaaaata 160  Q
    |||||||| | ||||||||||||||||||||||||||||| ||||||    
T  40352031 taacgaatcaacacaatagttcttcaatgtatcaaaatttcaaaata 40352077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 39608648 - 39608612
Alignment:
Q  126 acaatagttcttcaatgtatcaaaattttaaaatagt 162  Q
    ||||||||| |||||||||||||||||||||||||||    
T  39608648 acaatagtttttcaatgtatcaaaattttaaaatagt 39608612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 23474548 - 23474591
Alignment:
Q  128 aatagttcttcaatgtatcaaaattttaaaatagtcattcattg 171  Q
    |||||| |||||||||||||||||||||||||||| ||| ||||    
T  23474548 aatagtccttcaatgtatcaaaattttaaaatagttattgattg 23474591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 34703630 - 34703704
Alignment:
Q  88 aatagtaattttcatctatgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    |||||| ||||| ||| || ||| |||||||| || |||||||||| | |||||||||| ||||||||||||||||    
T  34703630 aatagtcattttgatccataaatgtataacgagtagtcacaatagtccatcaatgtatc-aaattttaaaatagtc 34703704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 1247517 - 1247574
Alignment:
Q  106 tgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    ||||||| |||||| || |||||||||||  | ||||||| |||||||||||||||||    
T  1247517 tgaatatgtaacgagtagtcacaatagtttcttaatgtattaaaattttaaaatagtc 1247574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 5362523 - 5362466
Alignment:
Q  106 tgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    ||||||| ||| || || |||||||| |  ||||||||||||||||||||||||||||    
T  5362523 tgaatatgtaaggagtagtcacaataatcattcaatgtatcaaaattttaaaatagtc 5362466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 5429564 - 5429528
Alignment:
Q  126 acaatagttcttcaatgtatcaaaattttaaaatagt 162  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  5429564 acaataattcctcaatgtatcaaaattttaaaatagt 5429528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 29911682 - 29911607
Alignment:
Q  87 aaatagtaattttcatctatgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagt 162  Q
    ||||||| |||||||||| ||||| | |||||| |   |||||||||| || ||||||||||||||||||||||||    
T  29911682 aaatagtcattttcatctctgaatgtgtaacgagtggccacaatagttgtttaatgtatcaaaattttaaaatagt 29911607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 42442802 - 42442744
Alignment:
Q  104 tatgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagt 162  Q
    ||||||||||||| ||||| ||||||||||  |||||||||||||||| | ||||||||    
T  42442802 tatgaatatataatgaatagtcacaatagtctttcaatgtatcaaaatctcaaaatagt 42442744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 2987222 - 2987175
Alignment:
Q  115 aacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    ||||| || ||||||||||||| ||||||||||||||||||||||||||    
T  2987222 aacgattagtcacaatagttct-caatgtatcaaaattttaaaatagtc 2987175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 28802310 - 28802362
Alignment:
Q  114 taacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtcatt 166  Q
    |||| |||| |||||||||| | || |||||||||||||||||||||||||||    
T  28802310 taacaaatagtcacaatagtccatcgatgtatcaaaattttaaaatagtcatt 28802362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 21600439 - 21600486
Alignment:
Q  124 tcacaatagttcttcaatgtatcaaaattttaaaatagtcattcattg 171  Q
    |||||||||| | | |||||||||||||||||||||||||||| ||||    
T  21600439 tcacaatagtcccttaatgtatcaaaattttaaaatagtcattgattg 21600486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 41302648 - 41302707
Alignment:
Q  104 tatgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    ||||||| | |||||| |||||||||||||  ||||| |||| |||||||||||||||||    
T  41302648 tatgaatgtgtaacgagtaatcacaatagtctttcaaagtattaaaattttaaaatagtc 41302707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 166
Target Start/End: Complemental strand, 41303216 - 41303178
Alignment:
Q  128 aatagttcttcaatgtatcaaaattttaaaatagtcatt 166  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  41303216 aatagtccctcaatgtatcaaaattttaaaatagtcatt 41303178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 21601926 - 21601983
Alignment:
Q  106 tgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    ||||||| |||| |||| |||||||||| | ||||||||||||||||  |||||||||    
T  21601926 tgaatatgtaacaaatagtcacaatagtccatcaatgtatcaaaattccaaaatagtc 21601983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 12530868 - 12530820
Alignment:
Q  112 tataacgaataatcacaatagttcttcaatgtatcaaaattttaaaata 160  Q
    |||||||||||| || ||||||| || |||||||| |||||||||||||    
T  12530868 tataacgaataaccataatagttttttaatgtatcgaaattttaaaata 12530820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 41616666 - 41616714
Alignment:
Q  112 tataacgaataatcacaatagttcttcaatgtatcaaaattttaaaata 160  Q
    ||||||||||||||| |||| ||||| |||||||  |||||||||||||    
T  41616666 tataacgaataatcataataattctttaatgtattgaaattttaaaata 41616714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 21020870 - 21020929
Alignment:
Q  106 tgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtcat 165  Q
    |||||||||||||| |||| | ||||||  ||| ||||||||||||||||||||||||||    
T  21020870 tgaatatataacgagtaattataatagtctttcgatgtatcaaaattttaaaatagtcat 21020929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 34937441 - 34937502
Alignment:
Q  99 tcatctatgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaata 160  Q
    |||||| ||||| | |||||| || ||||||||||||||||||||||| |||||| ||||||    
T  34937441 tcatctttgaatgtgtaacgagtagtcacaatagttcttcaatgtatccaaatttcaaaata 34937502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 34806627 - 34806682
Alignment:
Q  106 tgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatag 161  Q
    |||||||| ||||||||| ||||  ||||| ||||| |||||||||||||||||||    
T  34806627 tgaatataaaacgaataaccacatgagttcctcaatttatcaaaattttaaaatag 34806682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 22260413 - 22260447
Alignment:
Q  137 tcaatgtatcaaaattttaaaatagtcattcattg 171  Q
    |||||||||||||||||||||||||||||| ||||    
T  22260413 tcaatgtatcaaaattttaaaatagtcattgattg 22260447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 21021162 - 21021085
Alignment:
Q  124 tcacaatagttcttcaatgtatcaaaattttaaaatagtcattcattgagtattttataagtcaaaataatccttaac 201  Q
    ||||||| ||| || || ||||||||||||||||||||| ||| |||  | ||||||| |||||||||| || |||||    
T  21021162 tcacaatcgttttttaaagtatcaaaattttaaaatagttattgattatgcattttattagtcaaaatagtcattaac 21021085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 157
Target Start/End: Complemental strand, 26293613 - 26293585
Alignment:
Q  129 atagttcttcaatgtatcaaaattttaaa 157  Q
    |||||||||||||||||||||||||||||    
T  26293613 atagttcttcaatgtatcaaaattttaaa 26293585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 40407702 - 40407659
Alignment:
Q  128 aatagttcttcaatgtatcaaaattttaaaatagtcattcattg 171  Q
    |||||| |||||||||||||||||||||||||||||||| ||||    
T  40407702 aatagtccttcaatgtatcaaaattttaaaatagtcattgattg 40407659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 163
Target Start/End: Original strand, 4161659 - 4161698
Alignment:
Q  124 tcacaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    |||||||||| ||||||||||||||||||| |||||||||    
T  4161659 tcacaatagtccttcaatgtatcaaaatttcaaaatagtc 4161698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 40317869 - 40317794
Alignment:
Q  88 aatagtaattttcatctatgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    |||||| ||||| ||| |||||| | ||| ||||  |||||||||||| ||||||||| ||| |||||||||||||    
T  40317869 aatagtcattttgatccatgaatgtgtaatgaattgtcacaatagttcatcaatgtataaaatttttaaaatagtc 40317794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 40327943 - 40327868
Alignment:
Q  88 aatagtaattttcatctatgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    |||||| ||||| ||| |||||| | ||| ||||  |||||||||||| ||||||||| ||| |||||||||||||    
T  40327943 aatagtcattttgatccatgaatgtgtaatgaattgtcacaatagttcatcaatgtataaaatttttaaaatagtc 40327868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 14945385 - 14945427
Alignment:
Q  121 taatcacaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    |||||| |||||| ||||||| |||||||||||||||||||||    
T  14945385 taatcataatagtccttcaatttatcaaaattttaaaatagtc 14945427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 12034401 - 12034458
Alignment:
Q  106 tgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    ||||| |||||||| || |||||||||| | ||||||||||||||||  |||||||||    
T  12034401 tgaatgtataacgagtagtcacaatagtccctcaatgtatcaaaattgcaaaatagtc 12034458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 27146490 - 27146441
Alignment:
Q  114 taacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    |||||| ||||||||||| ||| | |||||||| ||||||||||||||||    
T  27146490 taacgagtaatcacaataattcattaatgtatcgaaattttaaaatagtc 27146441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 46804794 - 46804831
Alignment:
Q  126 acaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    |||||||| | |||||||||||||||||||||||||||    
T  46804794 acaatagtccctcaatgtatcaaaattttaaaatagtc 46804831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 48158247 - 48158190
Alignment:
Q  106 tgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    ||||||||| || | ||||||||||||||   |||| |||||||||||||||||||||    
T  48158247 tgaatatatgacaagtaatcacaatagtttcacaatatatcaaaattttaaaatagtc 48158190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 17753259 - 17753335
Alignment:
Q  88 aatagtaattttcatctatgaatatataacgaataatcacaatagttctt-caatgtatcaaaattttaaaatagtc 163  Q
    |||||| ||||| |||| ||||||| ||| || || ||||||||||  || |||||||||||||||| |||||||||    
T  17753259 aatagtcattttgatctctgaatatgtaatgagtagtcacaatagtcatttcaatgtatcaaaatttcaaaatagtc 17753335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 46217264 - 46217200
Alignment:
Q  137 tcaatgtatcaaaattttaaaatagtcattcattgagtattttataagtcaaaataatccttaac 201  Q
    |||||| ||||||||| ||||||||||||| |||| ||||||  | |||||||||| || |||||    
T  46217264 tcaatgcatcaaaattataaaatagtcattgattgtgtatttcgttagtcaaaatagtctttaac 46217200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000004; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 17572074 - 17572033
Alignment:
Q  121 taatcacaatagttcttcaatgtatcaaaattttaaaatagt 162  Q
    ||||||||||||||||||||||||| |||||| |||||||||    
T  17572074 taatcacaatagttcttcaatgtattaaaattctaaaatagt 17572033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 43838877 - 43838824
Alignment:
Q  139 aatgtatcaaaattttaaaatagtcattcattgagtattttataagtcaaaata 192  Q
    |||||||||||||||||||||||||||| |||| | ||||| | ||||||||||    
T  43838877 aatgtatcaaaattttaaaatagtcattgattgtgcattttgttagtcaaaata 43838824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 3941880 - 3941812
Alignment:
Q  124 tcacaatagttcttcaatgtatcaaaattttaaaatagtcattcattgagtattttataagtcaaaata 192  Q
    ||||| |||| ||| ||||||||||||||||||||||||| || |||||  ||||| | ||||||||||    
T  3941880 tcacagtagtcctttaatgtatcaaaattttaaaatagtccttaattgaacattttgttagtcaaaata 3941812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 1324524 - 1324567
Alignment:
Q  121 taatcacaatagttcttcaatgtatcaaaattttaaaatagtca 164  Q
    ||||||||||| | |||| |||||||||||||||||||||||||    
T  1324524 taatcacaataatccttcgatgtatcaaaattttaaaatagtca 1324567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 163
Target Start/End: Original strand, 38989766 - 38989805
Alignment:
Q  124 tcacaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  38989766 tcacaatagtccatcaatgtatcaaaattttaaaatagtc 38989805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 163
Target Start/End: Original strand, 47199744 - 47199783
Alignment:
Q  124 tcacaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  47199744 tcacaataattcttcaatgtatcaaaatttcaaaatagtc 47199783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 43837110 - 43837154
Alignment:
Q  114 taacgaataatcacaatagttcttcaatgtatcaaaattttaaaa 158  Q
    |||||||||||||||||||| | | |||||| |||||||||||||    
T  43837110 taacgaataatcacaatagtccctaaatgtaccaaaattttaaaa 43837154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 33583378 - 33583414
Alignment:
Q  126 acaatagttcttcaatgtatcaaaattttaaaatagt 162  Q
    |||||||||||||||||||| ||||||||||||||||    
T  33583378 acaatagttcttcaatgtattaaaattttaaaatagt 33583414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 162
Target Start/End: Original strand, 29488701 - 29488732
Alignment:
Q  131 agttcttcaatgtatcaaaattttaaaatagt 162  Q
    ||||||||||||||||||||||||||||||||    
T  29488701 agttcttcaatgtatcaaaattttaaaatagt 29488732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 163
Target Start/End: Original strand, 34883935 - 34883974
Alignment:
Q  124 tcacaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  34883935 tcacaatagtccctcaatgtatcaaaattttaaaatagtc 34883974  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 43503087 - 43503032
Alignment:
Q  108 aatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    ||||| |||||| || | ||||||||| |||||||||| |||||||||||||||||    
T  43503087 aatatgtaacgagtagttacaatagtttttcaatgtattaaaattttaaaatagtc 43503032  T

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Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 162
Target Start/End: Complemental strand, 6788591 - 6788517
Alignment:
Q  88 aatagtaattttcatctatgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagt 162  Q
    |||||| |||||||||  | ||| | |||| |||| ||| ||||||  |||||||||||||||||||||||||||    
T  6788591 aatagtcattttcatccttaaatgtgtaacaaatagtcataatagtcattcaatgtatcaaaattttaaaatagt 6788517  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 1517567 - 1517616
Alignment:
Q  114 taacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    ||||||||| | || ||||| |||||||||||| ||||||||||||||||    
T  1517567 taacgaatagttacgatagtccttcaatgtatcgaaattttaaaatagtc 1517616  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 7165825 - 7165776
Alignment:
Q  114 taacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    |||||| || ||||||||||  |||||||||| |||||||||||||||||    
T  7165825 taacgagtagtcacaatagtctttcaatgtattaaaattttaaaatagtc 7165776  T

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Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 17604256 - 17604313
Alignment:
Q  114 taacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtcattcattg 171  Q
    |||||| || |||||||||||  ||||| ||||||||||| |||||||||||| ||||    
T  17604256 taacgagtagtcacaatagttactcaatttatcaaaatttcaaaatagtcattgattg 17604313  T

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Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 6923943 - 6923867
Alignment:
Q  95 attttcatctatgaatatataacgaataatcacaatagttcttcaatgtatcaaaattttaaaatagtcattcattg 171  Q
    ||||| |||| ||||| ||||| || || | |||||| ||| ||||| |||||||||||||||||||| ||| ||||    
T  6923943 attttgatctctgaatgtataatgattagttacaataattcctcaatatatcaaaattttaaaatagttattgattg 6923867  T

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Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 29926941 - 29926889
Alignment:
Q  140 atgtatcaaaattttaaaatagtcattcattgagtattttataagtcaaaata 192  Q
    ||||||||||||||||||||||||| | |||| | |||| || ||||||||||    
T  29926941 atgtatcaaaattttaaaatagtcaatgattgtgcatttcattagtcaaaata 29926889  T

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Target: scaffold0329 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 6236 - 6272
Alignment:
Q  127 caatagttcttcaatgtatcaaaattttaaaatagtc 163  Q
    ||||||| | |||||||||||||||||||||||||||    
T  6236 caatagtccatcaatgtatcaaaattttaaaatagtc 6272  T

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