View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6351_low_1 (Length: 1477)

Name: NF6351_low_1
Description: NF6351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6351_low_1
NF6351_low_1
[»] chr2 (30 HSPs)
chr2 (18-667)||(12267627-12268276)
chr2 (854-1467)||(12268283-12268889)
chr2 (1198-1311)||(12270163-12270276)
chr2 (661-726)||(1777462-1777527)
chr2 (659-726)||(25979252-25979319)
chr2 (670-726)||(2412429-2412485)
chr2 (670-726)||(23861754-23861810)
chr2 (670-726)||(25977872-25977928)
chr2 (668-722)||(23863055-23863109)
chr2 (671-726)||(36837779-36837834)
chr2 (670-726)||(11087051-11087107)
chr2 (670-726)||(19604920-19604976)
chr2 (670-726)||(30843646-30843702)
chr2 (660-726)||(8809588-8809655)
chr2 (671-714)||(24754171-24754214)
chr2 (666-723)||(1137979-1138036)
chr2 (670-726)||(20245306-20245363)
chr2 (658-723)||(24358890-24358955)
chr2 (670-726)||(1778791-1778847)
chr2 (670-718)||(25282409-25282457)
chr2 (670-726)||(25283273-25283329)
chr2 (670-716)||(3924877-3924923)
chr2 (668-726)||(21573936-21573994)
chr2 (660-726)||(38980195-38980261)
chr2 (670-723)||(4794132-4794185)
chr2 (669-726)||(8810704-8810761)
chr2 (670-723)||(18113091-18113144)
chr2 (667-700)||(29182410-29182443)
chr2 (670-723)||(33575754-33575807)
chr2 (661-726)||(37271732-37271797)
[»] chr3 (40 HSPs)
chr3 (658-726)||(52401007-52401075)
chr3 (670-726)||(4705683-4705739)
chr3 (670-726)||(20489359-20489415)
chr3 (670-726)||(45267307-45267363)
chr3 (670-726)||(48035733-48035789)
chr3 (670-726)||(52403125-52403181)
chr3 (667-726)||(20488365-20488424)
chr3 (670-723)||(20585648-20585701)
chr3 (670-726)||(39820605-39820661)
chr3 (670-726)||(45268571-45268627)
chr3 (670-726)||(53121304-53121360)
chr3 (670-719)||(42446528-42446577)
chr3 (670-722)||(46026078-46026130)
chr3 (670-726)||(48033060-48033116)
chr3 (670-726)||(52708618-52708674)
chr3 (670-721)||(38505585-38505636)
chr3 (660-722)||(9855170-9855232)
chr3 (664-722)||(40477379-40477437)
chr3 (673-726)||(977847-977900)
chr3 (670-719)||(40476223-40476272)
chr3 (670-726)||(3416497-3416553)
chr3 (670-726)||(42447788-42447844)
chr3 (670-726)||(46104345-46104401)
chr3 (670-726)||(47433810-47433866)
chr3 (670-722)||(54437472-54437524)
chr3 (671-726)||(22508738-22508793)
chr3 (671-714)||(42444040-42444083)
chr3 (664-726)||(39819308-39819370)
chr3 (660-722)||(41780813-41780875)
chr3 (670-726)||(976782-976838)
chr3 (670-726)||(32635596-32635652)
chr3 (670-726)||(32637189-32637245)
chr3 (670-726)||(43641145-43641201)
chr3 (670-726)||(46027418-46027474)
chr3 (661-721)||(51004135-51004195)
chr3 (671-723)||(52707539-52707591)
chr3 (678-724)||(20644575-20644621)
chr3 (665-723)||(43441548-43441606)
chr3 (661-706)||(3417813-3417858)
chr3 (678-723)||(8555193-8555238)
[»] chr7 (38 HSPs)
chr7 (659-726)||(41693636-41693703)
chr7 (670-726)||(35212070-35212126)
chr7 (664-726)||(24195603-24195665)
chr7 (670-726)||(17066427-17066483)
chr7 (670-726)||(41694956-41695012)
chr7 (664-726)||(42254954-42255016)
chr7 (670-726)||(13418952-13419008)
chr7 (670-726)||(31848145-31848201)
chr7 (671-726)||(12385708-12385763)
chr7 (671-726)||(38742184-38742239)
chr7 (670-720)||(31489942-31489992)
chr7 (670-722)||(5611512-5611564)
chr7 (658-726)||(28462629-28462697)
chr7 (670-722)||(31853550-31853602)
chr7 (670-726)||(32197910-32197966)
chr7 (670-718)||(39619800-39619848)
chr7 (671-726)||(11217072-11217127)
chr7 (671-726)||(32544775-32544830)
chr7 (670-721)||(36748200-36748250)
chr7 (671-718)||(43066004-43066051)
chr7 (660-722)||(36749252-36749314)
chr7 (670-723)||(32196686-32196739)
chr7 (673-726)||(39618661-39618713)
chr7 (665-721)||(554242-554298)
chr7 (670-726)||(12933421-12933477)
chr7 (670-726)||(24197104-24197160)
chr7 (670-726)||(25046241-25046297)
chr7 (670-726)||(40576768-40576824)
chr7 (682-726)||(42255903-42255947)
chr7 (674-726)||(43869913-43869965)
chr7 (671-726)||(5610159-5610214)
chr7 (660-723)||(25988694-25988757)
chr7 (665-700)||(28263039-28263074)
chr7 (664-723)||(44568635-44568694)
chr7 (650-700)||(8555767-8555817)
chr7 (662-723)||(1614849-1614910)
chr7 (657-722)||(11766906-11766971)
chr7 (673-726)||(25037755-25037808)
[»] chr1 (45 HSPs)
chr1 (670-726)||(46075051-46075107)
chr1 (670-722)||(24609921-24609973)
chr1 (665-726)||(9774889-9774950)
chr1 (662-726)||(11710547-11710611)
chr1 (670-726)||(27262910-27262966)
chr1 (670-726)||(27264217-27264273)
chr1 (670-726)||(39163025-39163081)
chr1 (664-726)||(47038862-47038924)
chr1 (670-723)||(48588965-48589018)
chr1 (670-723)||(48594052-48594105)
chr1 (670-723)||(48598663-48598716)
chr1 (670-726)||(23469970-23470026)
chr1 (670-726)||(24611118-24611174)
chr1 (670-726)||(35721103-35721159)
chr1 (670-726)||(37395635-37395691)
chr1 (670-726)||(50164405-50164461)
chr1 (671-726)||(9774040-9774095)
chr1 (663-726)||(20723689-20723752)
chr1 (670-726)||(11711255-11711310)
chr1 (670-726)||(13074575-13074631)
chr1 (670-726)||(20722474-20722530)
chr1 (670-726)||(24427370-24427426)
chr1 (670-726)||(26863862-26863918)
chr1 (670-726)||(46073887-46073943)
chr1 (670-716)||(2604138-2604184)
chr1 (673-726)||(17976766-17976819)
chr1 (673-726)||(17977560-17977613)
chr1 (673-726)||(27816721-27816774)
chr1 (660-700)||(25658269-25658309)
chr1 (670-726)||(34934748-34934804)
chr1 (670-726)||(35722286-35722342)
chr1 (670-726)||(35911889-35911945)
chr1 (670-726)||(37396841-37396897)
chr1 (660-723)||(33000614-33000677)
chr1 (659-726)||(45290448-45290515)
chr1 (670-717)||(45979506-45979553)
chr1 (668-723)||(51240119-51240174)
chr1 (665-723)||(10631473-10631531)
chr1 (673-723)||(28198435-28198485)
chr1 (670-716)||(48856214-48856260)
chr1 (678-723)||(12360673-12360718)
chr1 (663-700)||(17130051-17130088)
chr1 (670-723)||(24507481-24507534)
chr1 (673-726)||(27815446-27815499)
chr1 (670-726)||(39162825-39162882)
[»] chr6 (24 HSPs)
chr6 (665-723)||(17516159-17516217)
chr6 (670-726)||(17517310-17517366)
chr6 (670-726)||(34998142-34998198)
chr6 (670-723)||(29291361-29291414)
chr6 (671-723)||(1171655-1171707)
chr6 (670-726)||(18810534-18810590)
chr6 (670-726)||(21165248-21165304)
chr6 (671-726)||(3279500-3279555)
chr6 (670-723)||(1974156-1974209)
chr6 (665-726)||(16995448-16995509)
chr6 (665-726)||(25440674-25440735)
chr6 (670-726)||(20393269-20393325)
chr6 (663-715)||(20895953-20896005)
chr6 (670-726)||(20897498-20897554)
chr6 (670-726)||(21953208-21953264)
chr6 (659-719)||(30253547-30253607)
chr6 (670-726)||(34995116-34995172)
chr6 (670-726)||(1972402-1972458)
chr6 (670-722)||(3276369-3276421)
chr6 (667-723)||(13617528-13617584)
chr6 (671-722)||(20391217-20391268)
chr6 (670-723)||(17000281-17000334)
chr6 (659-700)||(19320758-19320799)
chr6 (670-723)||(31198617-31198670)
[»] chr5 (23 HSPs)
chr5 (664-726)||(3936574-3936636)
chr5 (667-726)||(3205103-3205162)
chr5 (665-726)||(27571130-27571191)
chr5 (670-726)||(4565395-4565451)
chr5 (670-726)||(6894011-6894067)
chr5 (667-722)||(15604063-15604117)
chr5 (670-727)||(14809165-14809222)
chr5 (670-726)||(3954054-3954110)
chr5 (670-726)||(31540498-31540554)
chr5 (670-726)||(31541623-31541679)
chr5 (670-721)||(15599767-15599818)
chr5 (665-722)||(34911833-34911890)
chr5 (670-726)||(3938061-3938117)
chr5 (670-718)||(27097314-27097362)
chr5 (670-721)||(27570058-27570109)
chr5 (665-723)||(6912802-6912860)
chr5 (670-708)||(25252643-25252681)
chr5 (660-726)||(25254132-25254198)
chr5 (670-708)||(25316428-25316466)
chr5 (660-726)||(25317922-25317988)
chr5 (661-723)||(40764725-40764787)
chr5 (658-723)||(19565457-19565522)
chr5 (670-719)||(34910595-34910643)
[»] chr8 (37 HSPs)
chr8 (665-726)||(22534723-22534784)
chr8 (659-726)||(10718449-10718516)
chr8 (667-723)||(3483632-3483688)
chr8 (670-726)||(10717123-10717179)
chr8 (670-722)||(14197827-14197879)
chr8 (1038-1118)||(17032022-17032100)
chr8 (1038-1118)||(17562458-17562536)
chr8 (670-722)||(28997998-28998050)
chr8 (665-726)||(36588219-36588280)
chr8 (670-726)||(28996836-28996892)
chr8 (670-725)||(45517962-45518017)
chr8 (670-723)||(1420446-1420499)
chr8 (665-726)||(22533314-22533375)
chr8 (670-723)||(39440426-39440479)
chr8 (670-726)||(4182624-4182680)
chr8 (670-726)||(22270945-22271001)
chr8 (670-726)||(22272271-22272327)
chr8 (670-726)||(39439926-39439982)
chr8 (660-723)||(10872907-10872970)
chr8 (670-723)||(3680746-3680799)
chr8 (1056-1109)||(17030575-17030627)
chr8 (1056-1109)||(17561011-17561063)
chr8 (665-726)||(45516394-45516455)
chr8 (670-726)||(3031544-3031600)
chr8 (670-726)||(4183980-4184036)
chr8 (658-722)||(27117922-27117986)
chr8 (670-726)||(30124224-30124280)
chr8 (670-726)||(38456731-38456787)
chr8 (670-726)||(38658483-38658539)
chr8 (664-723)||(20984142-20984201)
chr8 (671-718)||(41357375-41357422)
chr8 (668-722)||(38455447-38455501)
chr8 (673-726)||(1376940-1376993)
chr8 (673-726)||(1385556-1385609)
chr8 (670-723)||(4473989-4474042)
chr8 (658-723)||(28346384-28346449)
chr8 (665-726)||(36589388-36589449)
[»] chr4 (38 HSPs)
chr4 (670-726)||(33137229-33137285)
chr4 (670-726)||(3879088-3879144)
chr4 (670-726)||(22204057-22204113)
chr4 (670-726)||(42359347-42359403)
chr4 (670-726)||(54121701-54121757)
chr4 (670-722)||(3880501-3880553)
chr4 (662-726)||(29060883-29060947)
chr4 (670-722)||(32699319-32699371)
chr4 (670-722)||(33134893-33134945)
chr4 (670-726)||(45618287-45618343)
chr4 (671-726)||(17371846-17371901)
chr4 (661-723)||(34659699-34659761)
chr4 (666-719)||(41935078-41935131)
chr4 (665-726)||(55542580-55542641)
chr4 (670-726)||(19674416-19674472)
chr4 (670-718)||(38166497-38166545)
chr4 (658-726)||(42358022-42358090)
chr4 (670-726)||(45619732-45619788)
chr4 (687-726)||(40198593-40198632)
chr4 (664-726)||(16573374-16573436)
chr4 (670-720)||(41933820-41933870)
chr4 (670-707)||(5259171-5259208)
chr4 (670-723)||(19675624-19675677)
chr4 (667-719)||(16916066-16916118)
chr4 (660-723)||(26412182-26412245)
chr4 (670-724)||(4211563-4211617)
chr4 (670-723)||(12152438-12152491)
chr4 (670-723)||(14487804-14487857)
chr4 (662-723)||(14791751-14791812)
chr4 (665-726)||(17281568-17281629)
chr4 (665-726)||(17370070-17370131)
chr4 (670-723)||(23245540-23245593)
chr4 (670-723)||(26412529-26412582)
chr4 (662-723)||(30046737-30046798)
chr4 (662-723)||(30061078-30061139)
chr4 (670-715)||(32698001-32698046)
chr4 (662-723)||(43231334-43231395)
chr4 (670-723)||(46292394-46292447)
[»] scaffold0002 (4 HSPs)
scaffold0002 (673-726)||(344942-344995)
scaffold0002 (670-722)||(374337-374389)
scaffold0002 (670-722)||(345902-345954)
scaffold0002 (670-715)||(376381-376426)
[»] scaffold0562 (1 HSPs)
scaffold0562 (670-726)||(9924-9980)
[»] scaffold0517 (2 HSPs)
scaffold0517 (670-726)||(11523-11579)
scaffold0517 (670-726)||(10317-10373)
[»] scaffold0230 (1 HSPs)
scaffold0230 (670-726)||(432-488)
[»] scaffold0106 (2 HSPs)
scaffold0106 (670-726)||(30908-30964)
scaffold0106 (670-726)||(29731-29787)
[»] scaffold0001 (2 HSPs)
scaffold0001 (670-726)||(120986-121042)
scaffold0001 (670-726)||(119595-119651)
[»] scaffold0095 (1 HSPs)
scaffold0095 (670-723)||(42759-42812)
[»] scaffold0516 (1 HSPs)
scaffold0516 (670-722)||(1140-1192)
[»] scaffold0009 (1 HSPs)
scaffold0009 (670-726)||(202581-202637)
[»] scaffold0765 (1 HSPs)
scaffold0765 (671-722)||(1863-1914)
[»] scaffold0176 (1 HSPs)
scaffold0176 (658-700)||(21686-21728)
[»] scaffold0005 (1 HSPs)
scaffold0005 (662-723)||(47919-47980)


Alignment Details
Target: chr2 (Bit Score: 589; Significance: 0; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 589; E-Value: 0
Query Start/End: Original strand, 18 - 667
Target Start/End: Original strand, 12267627 - 12268276
Alignment:
Q  18 agaatataggtcaagaataaaagagagtatagaatataggcgaagatttgattaataatcagaaatggtttatcctcatcnnnnnnncttttctattttg 117  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||||||||||    
T  12267627 agaatataggtcaagaataaaagagagtatagaatataggccaagatttgattaataatcagaaatggtttatcctcatctctttttcttttctattttg 12267726  T
Q  118 taaaatgtacgcatggaacaaatcaaccaatggagagatgttttataaggatgcttacatgtttcaaaatcctccattgaataagcagcctagggctaag 217  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12267727 taaaatgtacgcatggaacaaatcaaccaatggtgagatgttttataaggatgcttacatgtttcaaaatcctccattgtataagcagcctagggctaag 12267826  T
Q  218 aatgtttggaaatcatttgttcctccttccagttcaatgccatcagatcacacaatgaataaatgacaaagctatagatactcatgctatgaattaaaat 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12267827 aatgtttggaaatcatttgttcctccttccagttcaatgccatcagatcacgcaatgaataaatgacaaagctatagatactcatactatgaattaaaat 12267926  T
Q  318 ctaataacttgaacccttcccactatagaaattaaagaggccttcaaagttgtcaatttggatttgattctatccacaactttctcttcaacaagaagat 417  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12267927 ctaataacttgaacccttcccactatagaaattaaagatgccttcaaagttgtcaatttggatttgattctatccacaactttctcttcaacaagaagat 12268026  T
Q  418 tattgttgtagacactatcattagtttgactctgaatttgatgaaggttagatttagttacttggaaattgatgttaatgtccccgaacacattcttatt 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12268027 tattgttgtagacactatcattagtttgactctgaatttgatgaaggttgtattcagttacttggaaattgatgttaatgtccccgaacacattcttatt 12268126  T
Q  518 ccaatccttatgtttgactttcaaggatttgatgttttgactaagcacaaacatggggcacctagtgtaaacctcattccaagttttgtttaatgatatt 617  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12268127 ccaatccttatgtttgactttcaaggatttgatgttttgactaagcacaaacatggggcacctagtgtaaacctcattccaagttttgtttaatgatatt 12268226  T
Q  618 gatacattcaagatgagaataccacacttacgatgacattttaaaataaa 667  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12268227 gatacattcaagatgagaataccacacttacaatgacattttaaaataaa 12268276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 492; E-Value: 0
Query Start/End: Original strand, 854 - 1467
Target Start/End: Original strand, 12268283 - 12268889
Alignment:
Q  854 aaaccaatttttcatttaagnnnnnnnaaaatttctttgataaacaaattatagcaaaaagatgatgcactataaaaatcttctttttnnnnnnnttata 953  Q
    ||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||  |||||||||||  ||||||||       |||||    
T  12268283 aaaccaatttttcatttaagtttttttaaaatttctttgataaacaaattatagcaaaaagatgacacactataaaaaatttctttttaaaaaaattata 12268382  T
Q  954 acaatcgagctcaaaatcaacagcactccatttttgcttctgggtttcgatcacaattgagtgaggagaagaaggtggaagtgagagaaatttaaagagt 1053  Q
    ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  12268383 acaatcgagctcaaaattaatagcactccatttttgcttctggggttcgatcacaatcgagtgagaagaagaaggtggaagtgagagaaatttaaagagt 12268482  T
Q  1054 tagaaaattgaaatgtaatttaaaaggaaaattataaagcactaataacaaaaagattgttacaacttacaaagtatgaaacacattttggaaatgttac 1153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12268483 tagaaaattgaaatgtaatttaaaaggaaaattataaagcactaataacaaaaagattgttacaacgtacaaagtatgaaacacattttggaaatgttac 12268582  T
Q  1154 aaaatcaccatagcagtaacaatttaacaaatgttacaaggtgagtgagtgagtgttactaaaagtcacaaatgcagtagtggctacccatccccccata 1253  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||    
T  12268583 aaaatcaccatatcagtaacaatttaacaaatgttacaaggtgagtgagtgagtgttactaaaagtcacaaatgcagtagtggcta--------cccata 12268674  T
Q  1254 tcaatattttcatttattactaataaattataaattattttatagaatcgtttgctat-aaaaaataaaggtctaatgcaaatatctttttgggtgagtc 1352  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12268675 tcaatattttcatttattactaataaattataaattattttatagaatcgtttgctataaaaaaataaaggtctaatgcaaatatctttttgggtgagtc 12268774  T
Q  1353 atctgcaaaatctaaaacatcacaaactggagaattttagtccagattcagaaaagataaatagctagaagagttatggtagttagtcaagtaaaacaat 1452  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12268775 atctgcaaaatctaaaacatcacaaactggagaattttagtccagattcagaaaagataaatagctagaagagttatggtagttagtcaagtaaaacaat 12268874  T
Q  1453 gcgttgtgatgatgt 1467  Q
    |||||||||||||||    
T  12268875 gcgttgtgatgatgt 12268889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 4e-26
Query Start/End: Original strand, 1198 - 1311
Target Start/End: Original strand, 12270163 - 12270276
Alignment:
Q  1198 gtgagtgagtgttactaaaagtcacaaatgcagtagtggctacccatccccccatatcaatattttcatttattactaataaattataaattattttata 1297  Q
    |||||| |||||||| |||||||| ||||| ||||||||||||| ||| |||||||| ||||||||||||||||   |||||||||||||||| |||| |    
T  12270163 gtgagtaagtgttacaaaaagtcataaatgtagtagtggctaccaatcaccccatataaatattttcatttatttgcaataaattataaattactttaaa 12270262  T
Q  1298 gaatcgtttgctat 1311  Q
    |||||||| |||||    
T  12270263 gaatcgttggctat 12270276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 661 - 726
Target Start/End: Original strand, 1777462 - 1777527
Alignment:
Q  661 aaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  1777462 aaataaaggctaaaatatgtttttggtccctgcaaatatagcgagtttgagttttggtccctggta 1777527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 659 - 726
Target Start/End: Complemental strand, 25979319 - 25979252
Alignment:
Q  659 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||| ||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  25979319 taaaattaaggctaaaatatgtttttggtccctgcaaatatagcgaatttgggttttggtccctggta 25979252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 2412485 - 2412429
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||    
T  2412485 ctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttagtccctggta 2412429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 23861754 - 23861810
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||    
T  23861754 ctaaaatatgtttttggtccctgcaaatatggagagtttggattttggtccctggta 23861810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 25977872 - 25977928
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||    
T  25977872 ctaaaatatgtttttggtccctgcaaatatagtgagtttgggttttggtccctggta 25977928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 668 - 722
Target Start/End: Complemental strand, 23863109 - 23863055
Alignment:
Q  668 gactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||| |||||    
T  23863109 gactaaaatatgtttttggtctctgcaaatatggcgagtttgggttttgatccct 23863055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 671 - 726
Target Start/End: Complemental strand, 36837834 - 36837779
Alignment:
Q  671 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||| |||||| || |||||||||| ||||||||||||||||||||||||||    
T  36837834 taaaatatatttttggtctctgcaaatatagcgagtttgggttttggtccctggta 36837779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 11087051 - 11087107
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| |||| |||||||||||||| |||||||||| ||||||||| |||||    
T  11087051 ctaaaatatgattttaatccctgcaaatatagcgagtttggcttttggtccttggta 11087107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 19604976 - 19604920
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| |||||| |||||||||   |||||||||||||||||||||    
T  19604976 ctaaaatatgtttttggtccctgtaaatatggctcatttgggttttggtccctggta 19604920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 30843646 - 30843702
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| |||| ||| ||||||||||  |||||||||||||||||||||||||    
T  30843646 ctaaaatatgcttttaatcactgcaaatataacgagtttgggttttggtccctggta 30843702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 660 - 726
Target Start/End: Original strand, 8809588 - 8809655
Alignment:
Q  660 aaaataaagactaaaatatgtttttgatccct-gcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||| |||| |||||||||||||||| ||||| ||||||||  ||| |||||||||||||||||||||    
T  8809588 aaaaaaaaggctaaaatatgtttttggtcccttgcaaatataacgaatttgggttttggtccctggta 8809655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 671 - 714
Target Start/End: Complemental strand, 24754214 - 24754171
Alignment:
Q  671 taaaatatgtttttgatccctgcaaatatggcgagtttgggttt 714  Q
    ||||||||||||||| |||||||||||||||||| |||||||||    
T  24754214 taaaatatgtttttggtccctgcaaatatggcgaatttgggttt 24754171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 666 - 723
Target Start/End: Original strand, 1137979 - 1138036
Alignment:
Q  666 aagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||||||| ||||| |||||||||||||| |  |||| ||||||||||||||    
T  1137979 aagactaaaatatggttttggtccctgcaaatatgcctcgttttggttttggtccctg 1138036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 20245363 - 20245306
Alignment:
Q  670 ctaaaatatg-tttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| |||||||| ||||||||||| |||| |||||||||| ||||||||||    
T  20245363 ctaaaatatggtttttgattcctgcaaatatagcgaatttgggttttagtccctggta 20245306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 658 - 723
Target Start/End: Complemental strand, 24358955 - 24358890
Alignment:
Q  658 ttaaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||||| ||| |||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  24358955 ttaaaatgaaggctaaaatatggttttgatccctgcaaatatgcctcgttttggttttagtccctg 24358890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 1778847 - 1778791
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| | ||||||||||| |||| ||||||||||||||| |||||    
T  1778847 ctaaaatatgcttttggttcctgcaaatatagcgactttgggttttggtccttggta 1778791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 718
Target Start/End: Original strand, 25282409 - 25282457
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggt 718  Q
    |||||||||||||||| |||||| ||||||| |||||||| ||||||||    
T  25282409 ctaaaatatgtttttggtccctgtaaatatgtcgagtttgagttttggt 25282457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 25283329 - 25283273
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| || |||||||||| |||| |||| |||||| |||||||||    
T  25283329 ctaaaatatgtttttggtcactgcaaatatagcgaatttgagttttgatccctggta 25283273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 670 - 716
Target Start/End: Complemental strand, 3924923 - 3924877
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttg 716  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||||    
T  3924923 ctaaaatatgcttttgctccttgcaaatatggcgagtttggattttg 3924877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 668 - 726
Target Start/End: Original strand, 21573936 - 21573994
Alignment:
Q  668 gactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||| ||||| |||||||||||||| | ||||||  ||||||||| |||||    
T  21573936 gactaaaatatgcttttggtccctgcaaatatgacaagtttgatttttggtccttggta 21573994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 660 - 726
Target Start/End: Complemental strand, 38980261 - 38980195
Alignment:
Q  660 aaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||| |||||||||| ||||  |||||||||||||| |  |||| |||||| ||||||||||    
T  38980261 aaaataaaggctaaaatatggttttagtccctgcaaatatgcctcgttttggttttagtccctggta 38980195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 670 - 723
Target Start/End: Original strand, 4794132 - 4794185
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  4794132 ctaaaatatggttttgatccctgcaaatatgtctcgttttggttttagtccctg 4794185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 669 - 726
Target Start/End: Complemental strand, 8810761 - 8810704
Alignment:
Q  669 actaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||||||||||| || |||||||||| |||| ||||| ||||  |||||||||    
T  8810761 actaaaatatgtttttggtctctgcaaatatagcgaatttggattttaatccctggta 8810704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 670 - 723
Target Start/End: Original strand, 18113091 - 18113144
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||| ||||| |||||||||||||| | ||||| |||||| |||||||    
T  18113091 ctaaaatatggttttggtccctgcaaatatgcctagttttggttttagtccctg 18113144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 667 - 700
Target Start/End: Complemental strand, 29182443 - 29182410
Alignment:
Q  667 agactaaaatatgtttttgatccctgcaaatatg 700  Q
    ||||||||||||| ||||||||||||||||||||    
T  29182443 agactaaaatatgattttgatccctgcaaatatg 29182410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 670 - 723
Target Start/End: Original strand, 33575754 - 33575807
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  33575754 ctaaaatatggttttgatccctgcaaatatgtctcgttttggttttagtccctg 33575807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 661 - 726
Target Start/End: Original strand, 37271732 - 37271797
Alignment:
Q  661 aaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||| |||||||||| ||||  |||||||||||||| |  |||| |||||| ||||||||||    
T  37271732 aaataaaggctaaaatatggttttagtccctgcaaatatgcctcgttttggttttagtccctggta 37271797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 4e-23; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 658 - 726
Target Start/End: Original strand, 52401007 - 52401075
Alignment:
Q  658 ttaaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  52401007 ttaaaattaaggctaaaatatgtttttggtccctgcaaatatggcgagtttgggttttggtccctggta 52401075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 4705683 - 4705739
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  4705683 ctaaaatatgcttttgatccctgcaaatatggcgagtttaggttttggtccctggta 4705739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 20489415 - 20489359
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  20489415 ctaaaatatgtttttggtccctgcaaatatgacgagtttgggttttggtccctggta 20489359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 45267307 - 45267363
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  45267307 ctaaaatatgtttttgatccctgcaaatatagcgagtttgagttttggtccctggta 45267363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 48035789 - 48035733
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  48035789 ctaaaatatgtttttgatccctgcaaatatgacgagtttggattttggtccctggta 48035733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 52403181 - 52403125
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  52403181 ctaaaatatgcttttggtccctgcaaatatggcgagtttgggttttggtccctggta 52403125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 667 - 726
Target Start/End: Original strand, 20488365 - 20488424
Alignment:
Q  667 agactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||    
T  20488365 agactaaaatatgtttttggtccctgcaaatatggtgaatttgggttttggtccctggta 20488424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 670 - 723
Target Start/End: Complemental strand, 20585701 - 20585648
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  20585701 ctaaaatatgtttttgatccctgcaaatatagcgagtttggattttggtccctg 20585648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 39820661 - 39820605
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  39820661 ctaaaatatggttttggtccctgcaaatatagcgagtttgggttttggtccctggta 39820605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 45268627 - 45268571
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||    
T  45268627 ctaaaatatgtttttaatccctgcaaatatagcaagtttgggttttggtccctggta 45268571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 53121304 - 53121360
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||    
T  53121304 ctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttagtccctggta 53121360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 670 - 719
Target Start/End: Original strand, 42446528 - 42446577
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtc 719  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  42446528 ctaaaatatgcttttggtccctgcaaatatggcgagtttgggttttggtc 42446577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 722
Target Start/End: Original strand, 46026078 - 46026130
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    |||||||||||||||| ||||||||||||| |||||||||| |||||||||||    
T  46026078 ctaaaatatgtttttggtccctgcaaatatagcgagtttggattttggtccct 46026130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 48033060 - 48033116
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| ||| ||||||||||| |||||||| |||||||||||||||    
T  48033060 ctaaaatatgtttttggtccttgcaaatatggtgagtttggattttggtccctggta 48033116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 52708674 - 52708618
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  52708674 ctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttggtctctggta 52708618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 670 - 721
Target Start/End: Complemental strand, 38505636 - 38505585
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccc 721  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||||||||||    
T  38505636 ctaaaatatgcttttgctccctgcaaatatggcgagtttgagttttggtccc 38505585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 660 - 722
Target Start/End: Original strand, 9855170 - 9855232
Alignment:
Q  660 aaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    ||||||| | |||||||||| |||||||||||| |||||| |||||||||| |||||||||||    
T  9855170 aaaataatggctaaaatatgattttgatccctgtaaatatagcgagtttggattttggtccct 9855232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 664 - 722
Target Start/End: Complemental strand, 40477437 - 40477379
Alignment:
Q  664 taaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    ||||| |||||||||| ||||| |||||||||||||  |||||||||||||||||||||    
T  40477437 taaaggctaaaatatgattttggtccctgcaaatataacgagtttgggttttggtccct 40477379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 673 - 726
Target Start/End: Complemental strand, 977900 - 977847
Alignment:
Q  673 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||||||| |||||    
T  977900 aaatatgcttttggtccctgcaaatatgacgagtttgggttttggtccttggta 977847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 670 - 719
Target Start/End: Original strand, 40476223 - 40476272
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtc 719  Q
    |||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  40476223 ctaaaatatgtttttggtccctgcaaatatagcgagtttggattttggtc 40476272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 3416497 - 3416553
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| |||||||||||| |||||| || ||||||| |||||||||||||||    
T  3416497 ctaaaatatgattttgatccctgtaaatatagcaagtttggtttttggtccctggta 3416553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 42447844 - 42447788
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||||| |||||||||| ||  |||||||||||||||||||||||    
T  42447844 ctaaaatatgcttttgattcctgcaaatacggttagtttgggttttggtccctggta 42447788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 46104345 - 46104401
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| ||||||||| ||||| ||||||||||    
T  46104345 ctaaaatatgattttggtccctgcaaatatagcgagtttgagtttttgtccctggta 46104401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 47433866 - 47433810
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| |||| |||| ||||||||||||||||    
T  47433866 ctaaaatatggttttggtccctgcaaatatagcgaatttgagttttggtccctggta 47433810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 722
Target Start/End: Complemental strand, 54437524 - 54437472
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    |||||||||||||||| ||||||||||||| |||| |||| ||||||||||||    
T  54437524 ctaaaatatgtttttggtccctgcaaatatagcgaatttgagttttggtccct 54437472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 671 - 726
Target Start/End: Original strand, 22508738 - 22508793
Alignment:
Q  671 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||| ||||| ||||||||||||| ||||||||| |||||||||| |||||    
T  22508738 taaaatatgattttggtccctgcaaatatagcgagtttgagttttggtccttggta 22508793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 671 - 714
Target Start/End: Original strand, 42444040 - 42444083
Alignment:
Q  671 taaaatatgtttttgatccctgcaaatatggcgagtttgggttt 714  Q
    ||||||||||||||| |||||||||||||||| |||||||||||    
T  42444040 taaaatatgtttttggtccctgcaaatatggcaagtttgggttt 42444083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 664 - 726
Target Start/End: Original strand, 39819308 - 39819370
Alignment:
Q  664 taaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||| |||||||||| ||||  ||||||||||||| |||||||||  |||||||||||||||    
T  39819308 taaagcctaaaatatggttttagtccctgcaaatatagcgagtttgaattttggtccctggta 39819370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 660 - 722
Target Start/End: Complemental strand, 41780875 - 41780813
Alignment:
Q  660 aaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    |||| |||| ||||||||||||||||||||||  |||||| || ||||||||||| |||||||    
T  41780875 aaaaaaaaggctaaaatatgtttttgatccctaaaaatatagcaagtttgggtttcggtccct 41780813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 976782 - 976838
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||||||||||||||||| |||| |||  ||||| ||||||||||    
T  976782 ctaaaatatgcttttgatccctgcaaatatagcgaatttaagttttagtccctggta 976838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 32635596 - 32635652
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||| |||||  ||| || |||||| ||||||||||||||||||||||||||    
T  32635596 ctaaaatatattttttgtccttgtaaatatagcgagtttgggttttggtccctggta 32635652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 32637245 - 32637189
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| |||||| |||| | |||||||||||||||||| |||||||    
T  32637245 ctaaaatatgcttttggtccctgtaaatgtagcgagtttgggttttggttcctggta 32637189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 43641145 - 43641201
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||  ||||||||||||| |||||||||| || ||||||||||||    
T  43641145 ctaaaatatgcttttagtccctgcaaatatagcgagtttggattatggtccctggta 43641201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 46027474 - 46027418
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||  ||||| ||||||||||||| |||||||||  |||||||||||||||    
T  46027474 ctaaaatatacttttggtccctgcaaatatagcgagtttgaattttggtccctggta 46027418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 661 - 721
Target Start/End: Original strand, 51004135 - 51004195
Alignment:
Q  661 aaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccc 721  Q
    ||||| || |||||||||||||||   ||||| ||||||||||| ||||||||||||||||    
T  51004135 aaatataggctaaaatatgtttttagaccctgtaaatatggcgaatttgggttttggtccc 51004195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 671 - 723
Target Start/End: Original strand, 52707539 - 52707591
Alignment:
Q  671 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||||||||||||| ||| ||||||||| |||| |||| |||||||||||||    
T  52707539 taaaatatgtttttggtccttgcaaatatagcgaatttgagttttggtccctg 52707591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 678 - 724
Target Start/End: Original strand, 20644575 - 20644621
Alignment:
Q  678 tgtttttgatccctgcaaatatggcgagtttgggttttggtccctgg 724  Q
    ||||||||||||||||||||||| |  |||| |||||||||||||||    
T  20644575 tgtttttgatccctgcaaatatgtctcgttttggttttggtccctgg 20644621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 665 - 723
Target Start/End: Complemental strand, 43441606 - 43441548
Alignment:
Q  665 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||| |||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  43441606 aaaggctaaaatatggttttgatccctgcaaatatgcctcgttttggttttagtccctg 43441548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 661 - 706
Target Start/End: Complemental strand, 3417858 - 3417813
Alignment:
Q  661 aaataaagactaaaatatgtttttgatccctgcaaatatggcgagt 706  Q
    |||| ||| |||||||||||||||| |||||| |||||||||||||    
T  3417858 aaatcaaggctaaaatatgtttttggtccctgtaaatatggcgagt 3417813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 678 - 723
Target Start/End: Complemental strand, 8555238 - 8555193
Alignment:
Q  678 tgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||||||||||||||||||||| |  |||| ||||||||||||||    
T  8555238 tgtttttgatccctgcaaatatgtcttgttttggttttggtccctg 8555193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 2e-22; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 659 - 726
Target Start/End: Original strand, 41693636 - 41693703
Alignment:
Q  659 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41693636 taaattaaaggctaaaatatgtttttgatccctgcaaatatggcgaatttgggttttggtccctggta 41693703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 35212070 - 35212126
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  35212070 ctaaaatatgtttttggtccctgcaaatatgacgagtttgggttttggtccctggta 35212126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 664 - 726
Target Start/End: Original strand, 24195603 - 24195665
Alignment:
Q  664 taaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||| |||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||    
T  24195603 taaaggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttgctccctggta 24195665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 17066427 - 17066483
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||    
T  17066427 ctaaaatatgcttttaatccctgcaaatatagcgagtttgggttttggtccctggta 17066483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 41695012 - 41694956
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  41695012 ctaaaatatgtttttcatccctgcaaatatagcgagtttgagttttggtccctggta 41694956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 664 - 726
Target Start/End: Original strand, 42254954 - 42255016
Alignment:
Q  664 taaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||| |||||||||| ||||| |||||| |||||||||||||||| ||||||||||||||||    
T  42254954 taaaggctaaaatatgcttttggtccctgtaaatatggcgagtttgagttttggtccctggta 42255016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 13418952 - 13419008
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||    
T  13418952 ctaaaatatgtttttggtccctgcaaatattgcgaatttgggtattggtccctggta 13419008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 31848201 - 31848145
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||  ||||||||||||| |||| |||||||||||||||||||||    
T  31848201 ctaaaatatgtttttagtccctgcaaatatagcgaatttgggttttggtccctggta 31848145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 671 - 726
Target Start/End: Complemental strand, 12385763 - 12385708
Alignment:
Q  671 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||| ||||| ||||||||||||| |||||||||| |||||||||||||||    
T  12385763 taaaatatgattttggtccctgcaaatatagcgagtttggattttggtccctggta 12385708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 671 - 726
Target Start/End: Original strand, 38742184 - 38742239
Alignment:
Q  671 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||||||||  ||||||||||||| ||||||||||||||||||||| ||||    
T  38742184 taaaatatgtttttagtccctgcaaatatagcgagtttgggttttggtccccggta 38742239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 31489992 - 31489942
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtcc 720  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||||||    
T  31489992 ctaaaatatgtttttggtccctgcaaatataacgagtttgggttttggtcc 31489942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 722
Target Start/End: Complemental strand, 5611564 - 5611512
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||| ||||||    
T  5611564 ctaaaatatgattttggtccctgcaaatatagcgagtttgggttttcgtccct 5611512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 658 - 726
Target Start/End: Complemental strand, 28462697 - 28462629
Alignment:
Q  658 ttaaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||| ||| ||||||||||| ||||| || ||||||||||| ||| ||||||||||| |||||||||    
T  28462697 ttaaaaaaaatactaaaatatgcttttggtctctgcaaatatgacgaatttgggttttgatccctggta 28462629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 722
Target Start/End: Original strand, 31853550 - 31853602
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    |||||||||||||||| ||||||||||||| | |||||||| |||||||||||    
T  31853550 ctaaaatatgtttttggtccctgcaaatattgtgagtttggattttggtccct 31853602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 32197966 - 32197910
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| |||| ||||||||||||||| |||||    
T  32197966 ctaaaatatgcttttggtccctgcaaatatagcgaatttgggttttggtccttggta 32197910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 718
Target Start/End: Complemental strand, 39619848 - 39619800
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggt 718  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||||||||    
T  39619848 ctaaaatatgcttttggtccatgcaaatatggcgagtttgggttttggt 39619800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 671 - 726
Target Start/End: Complemental strand, 11217127 - 11217072
Alignment:
Q  671 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||| ||||| ||||||||||||| |||||||||  |||||||||||||||    
T  11217127 taaaatatgcttttggtccctgcaaatatagcgagtttgaattttggtccctggta 11217072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 671 - 726
Target Start/End: Complemental strand, 32544830 - 32544775
Alignment:
Q  671 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||| ||||| ||||||||||||| |||| ||||||||||||||| |||||    
T  32544830 taaaatatgattttggtccctgcaaatatagcgaatttgggttttggtccttggta 32544775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 670 - 721
Target Start/End: Original strand, 36748200 - 36748250
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccc 721  Q
    |||||||||||||||| ||||||||||||| | |||||||||||||||||||    
T  36748200 ctaaaatatgtttttggtccctgcaaatat-gagagtttgggttttggtccc 36748250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 671 - 718
Target Start/End: Original strand, 43066004 - 43066051
Alignment:
Q  671 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggt 718  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  43066004 taaaatatgttttttatccctgcaaatatagcgagtttgagttttggt 43066051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 660 - 722
Target Start/End: Complemental strand, 36749314 - 36749252
Alignment:
Q  660 aaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    |||| |||| |||||||||||||||| ||  |||||||||| |||||||| ||||||||||||    
T  36749314 aaaaaaaaggctaaaatatgtttttggtcattgcaaatatgacgagtttgagttttggtccct 36749252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 670 - 723
Target Start/End: Original strand, 32196686 - 32196739
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||||||||| ||||||||||||| |||  ||||| ||||||||||||    
T  32196686 ctaaaatatgtttttggtccctgcaaatatagcgtatttggattttggtccctg 32196739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 673 - 726
Target Start/End: Original strand, 39618661 - 39618713
Alignment:
Q  673 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||||||| ||  |||||| |||||||||||||||||||||||||||||    
T  39618661 aaatatgtttttg-tctatgcaaaaatggcgagtttgggttttggtccctggta 39618713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 665 - 721
Target Start/End: Original strand, 554242 - 554298
Alignment:
Q  665 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccc 721  Q
    |||| |||||||||  | ||| ||||||||||||| |||||||||||||||||||||    
T  554242 aaaggctaaaatataatattggtccctgcaaatatagcgagtttgggttttggtccc 554298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 12933421 - 12933477
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| | |||||||  |||||||||||||||    
T  12933421 ctaaaatatgcttttggtccctgcaaatatagtgagtttgaattttggtccctggta 12933477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 24197160 - 24197104
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| |||| |||| |||||||| |||||||    
T  24197160 ctaaaatatgcttttggtccctgcaaatatagcgaatttgagttttggttcctggta 24197104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 25046297 - 25046241
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||| |||||||||||||||||| | ||||||||| |||||    
T  25046297 ctaaaatatgattttggtccttgcaaatatggcgagtttagattttggtccatggta 25046241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 40576768 - 40576824
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| |||||||||||||| ||| ||||| |||||||| ||||||    
T  40576768 ctaaaatatgcttttggtccctgcaaatatgacgaatttggattttggtctctggta 40576824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 682 - 726
Target Start/End: Complemental strand, 42255947 - 42255903
Alignment:
Q  682 tttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||    
T  42255947 tttggtccctgcaaatatgacgagtttgagttttggtccctggta 42255903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 674 - 726
Target Start/End: Complemental strand, 43869965 - 43869913
Alignment:
Q  674 aatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||| ||||| ||||||||||||| || | |||||||||||||||||||||    
T  43869965 aatatggttttggtccctgcaaatatagccaatttgggttttggtccctggta 43869913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 671 - 726
Target Start/End: Original strand, 5610159 - 5610214
Alignment:
Q  671 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||| |||||||||||||||||||  ||| |||||||||| ||| ||||||    
T  5610159 taaaatatgcttttgatccctgcaaatataacgaatttgggttttagtctctggta 5610214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 660 - 723
Target Start/End: Complemental strand, 25988757 - 25988694
Alignment:
Q  660 aaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||||||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  25988757 aaaataaaggctaaaatatggttttggtccctgcaaatatgcctcgttttggttttagtccctg 25988694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 665 - 700
Target Start/End: Complemental strand, 28263074 - 28263039
Alignment:
Q  665 aaagactaaaatatgtttttgatccctgcaaatatg 700  Q
    ||||||||||||||| ||||||||||||||||||||    
T  28263074 aaagactaaaatatggttttgatccctgcaaatatg 28263039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 664 - 723
Target Start/End: Complemental strand, 44568694 - 44568635
Alignment:
Q  664 taaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||| |||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  44568694 taaaggctaaaatatggttttgatccctgcaaatatgtctcgttttggttttagtccctg 44568635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 650 - 700
Target Start/End: Complemental strand, 8555817 - 8555767
Alignment:
Q  650 atgacattttaaaataaagactaaaatatgtttttgatccctgcaaatatg 700  Q
    |||| |||||||||||||| |||||||||| ||||  ||||||||||||||    
T  8555817 atgatattttaaaataaaggctaaaatatggttttagtccctgcaaatatg 8555767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 662 - 723
Target Start/End: Complemental strand, 1614910 - 1614849
Alignment:
Q  662 aataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  1614910 aataaaggctaaaatatggttttggtccctgcaaatatgcctcgttttggttttagtccctg 1614849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 657 - 722
Target Start/End: Original strand, 11766906 - 11766971
Alignment:
Q  657 tttaaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    ||||||| ||||| ||||||||| ||||| |||||||||||||| |  |||| |||||| ||||||    
T  11766906 tttaaaaaaaagattaaaatatggttttggtccctgcaaatatgcctcgttttggttttcgtccct 11766971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 673 - 726
Target Start/End: Original strand, 25037755 - 25037808
Alignment:
Q  673 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||| ||||  |||||||||||||| ||||||||  |||||||||||||||    
T  25037755 aaatatgattttagtccctgcaaatatgacgagtttgaattttggtccctggta 25037808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 1e-20; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 46075107 - 46075051
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  46075107 ctaaaatatgtttttgatccctgcaaatatagcgagtttgggttttggtccctggta 46075051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 670 - 722
Target Start/End: Original strand, 24609921 - 24609973
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24609921 ctaaaatatgtttttggtccctgcaaatatggcgagtttgggttttggtccct 24609973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 665 - 726
Target Start/End: Complemental strand, 9774950 - 9774889
Alignment:
Q  665 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||| |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  9774950 aaaggctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggta 9774889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 662 - 726
Target Start/End: Original strand, 11710547 - 11710611
Alignment:
Q  662 aataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||| ||||||||||||||||||||||| ||||||  |||| ||||||||||||||||||||    
T  11710547 aataaaggctaaaatatgtttttgatccctgtaaatataacgaggttgggttttggtccctggta 11710611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 27262910 - 27262966
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  27262910 ctaaaatatgtttttggtccctgcaaatatagcgagtttgtgttttggtccctggta 27262966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 27264273 - 27264217
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  27264273 ctaaaatatgattttggtccctgcaaatatagcgagtttgggttttggtccctggta 27264217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 39163081 - 39163025
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  39163081 ctaaaatatgcttttggtccctgcaaatatggcgaggttgggttttggtccctggta 39163025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 664 - 726
Target Start/End: Original strand, 47038862 - 47038924
Alignment:
Q  664 taaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||| |||||||||||||||  ||||||||||||| || |||||||||||||||||||||||    
T  47038862 taaaggctaaaatatgtttttagtccctgcaaatatagctagtttgggttttggtccctggta 47038924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 670 - 723
Target Start/End: Complemental strand, 48589018 - 48588965
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||    
T  48589018 ctaaaatatgtttttggtccctgtaaatatggtgagtttgggttttggtccctg 48588965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 670 - 723
Target Start/End: Complemental strand, 48594105 - 48594052
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||| ||||||    
T  48594105 ctaaaatatgtttttggtccctgtaaatatggcgagtttgggttttgatccctg 48594052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 670 - 723
Target Start/End: Complemental strand, 48598716 - 48598663
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||| ||||||    
T  48598716 ctaaaatatgtttttggtccctgtaaatatggcgagtttgggttttgatccctg 48598663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 23470026 - 23469970
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| ||||||||||||| |||||||| ||||||| |||||||||    
T  23470026 ctaaaatatgtttttggtccctgcaaatatagcgagtttcggttttgatccctggta 23469970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 24611174 - 24611118
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| |||||| ||||||| |||||||| ||||||||||||||||    
T  24611174 ctaaaatatgtttttggtccctgtaaatatgacgagtttgagttttggtccctggta 24611118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 35721103 - 35721159
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| |||||||||||||  ||| |||||||||||||||||||||    
T  35721103 ctaaaatatgtttttggtccctgcaaatataacgaatttgggttttggtccctggta 35721159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 37395635 - 37395691
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| ||||||||||||| |||  |||||||||||||||||||||    
T  37395635 ctaaaatatgtttttggtccctgcaaatatagcgtatttgggttttggtccctggta 37395691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 50164405 - 50164461
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||    
T  50164405 ctaaaatatgcttttggtccctgcaaatatggcgagtttgagttttggtccttggta 50164461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 671 - 726
Target Start/End: Original strand, 9774040 - 9774095
Alignment:
Q  671 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||||||||| |||||||||||||  |||||||| ||||||||||||||||    
T  9774040 taaaatatgtttttggtccctgcaaatataacgagtttgagttttggtccctggta 9774095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 663 - 726
Target Start/End: Complemental strand, 20723752 - 20723689
Alignment:
Q  663 ataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||| |||||||||||||||| ||||||||||||| |||| |||| ||||| ||||||||||    
T  20723752 ataaaggctaaaatatgtttttggtccctgcaaatatagcgaatttgagttttagtccctggta 20723689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 11711310 - 11711255
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| ||||||||||||| |||| |||||| ||||||||||||||    
T  11711310 ctaaaatatgtttttggtccctgcaaatatagcgaatttggg-tttggtccctggta 11711255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 13074631 - 13074575
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||| |||||| | |||||||||||| |||||||| ||||||||||||||||    
T  13074631 ctaaaatatatttttggttcctgcaaatatgacgagtttgagttttggtccctggta 13074575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 20722474 - 20722530
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||| || ||||| ||||||||||||| |||| |||||||||||||||||||||    
T  20722474 ctaaaatgtgcttttggtccctgcaaatatagcgaatttgggttttggtccctggta 20722530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 24427426 - 24427370
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| ||||| ||||||| ||||||||| ||||| ||||||||||    
T  24427426 ctaaaatatgtttttggtccctacaaatatagcgagtttgagttttagtccctggta 24427370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 26863862 - 26863918
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||| |||||||| ||||||||||||| |||| |||| ||||||||||||||||    
T  26863862 ctaaaatgtgtttttggtccctgcaaatatagcgaatttgagttttggtccctggta 26863918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 46073887 - 46073943
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||||||||||||||||| || | |||||||||| ||||||||||    
T  46073887 ctaaaatatgcttttgatccctgcaaatatagcaaatttgggttttagtccctggta 46073943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 670 - 716
Target Start/End: Complemental strand, 2604184 - 2604138
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttg 716  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||||    
T  2604184 ctaaaatatgtttttagtccctgcaaatatggggagtttgggttttg 2604138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 673 - 726
Target Start/End: Original strand, 17976766 - 17976819
Alignment:
Q  673 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||| ||||| | ||||||||||| |||| |||||||||||||||||||||    
T  17976766 aaatatggttttggttcctgcaaatatagcgaatttgggttttggtccctggta 17976819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 673 - 726
Target Start/End: Complemental strand, 17977613 - 17977560
Alignment:
Q  673 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||| ||||| ||||||||||||| |||| ||||||||||||||| |||||    
T  17977613 aaatatggttttggtccctgcaaatatagcgaatttgggttttggtccttggta 17977560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 673 - 726
Target Start/End: Complemental strand, 27816774 - 27816721
Alignment:
Q  673 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||| ||||| ||||||||||||| || | |||||||||||||||||||||    
T  27816774 aaatatggttttggtccctgcaaatatagccaatttgggttttggtccctggta 27816721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 660 - 700
Target Start/End: Complemental strand, 25658309 - 25658269
Alignment:
Q  660 aaaataaagactaaaatatgtttttgatccctgcaaatatg 700  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  25658309 aaaataaagactaaaatattcttttgatccctgcaaatatg 25658269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 34934804 - 34934748
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||  ||||||||||||| |||| ||||||||||||||| |||||    
T  34934804 ctaaaatatgctttttgtccctgcaaatatagcgaatttgggttttggtccttggta 34934748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 35722342 - 35722286
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| |||||| |||||| |||| ||||| |||||||| ||||||    
T  35722342 ctaaaatatgtttttggtccctgtaaatatagcgaatttggattttggtctctggta 35722286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 35911945 - 35911889
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| |||| ||||| ||||||||| |||||    
T  35911945 ctaaaatatgcttttggtccctgcaaatatagcgaatttggattttggtccttggta 35911889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 37396897 - 37396841
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| |||| |||| |||||||||| |||||    
T  37396897 ctaaaatatgcttttggtccctgcaaatatagcgaatttgagttttggtccttggta 37396841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 660 - 723
Target Start/End: Complemental strand, 33000677 - 33000614
Alignment:
Q  660 aaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||||||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  33000677 aaaataaaggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctg 33000614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 659 - 726
Target Start/End: Original strand, 45290448 - 45290515
Alignment:
Q  659 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| |||||||||| ||||  |||||||||||||| |  |||| |||||| ||||||||||    
T  45290448 taaaataaaggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctggta 45290515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 670 - 717
Target Start/End: Complemental strand, 45979553 - 45979506
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttgg 717  Q
    |||||||||||||||| ||||||||||||| |||| |||| |||||||    
T  45979553 ctaaaatatgtttttggtccctgcaaatatagcgaatttgagttttgg 45979506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 668 - 723
Target Start/End: Original strand, 51240119 - 51240174
Alignment:
Q  668 gactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||||||||||| || |||||||||| |||| ||||| ||||| ||||||    
T  51240119 gactaaaatatgtttttggtctctgcaaatatagcgaatttggattttgatccctg 51240174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 665 - 723
Target Start/End: Complemental strand, 10631531 - 10631473
Alignment:
Q  665 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||| |||||||||| ||||| ||||||||||||||||  |||| |||||| |||||||    
T  10631531 aaaggctaaaatatggttttggtccctgcaaatatggctcgttttggttttagtccctg 10631473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 673 - 723
Target Start/End: Original strand, 28198435 - 28198485
Alignment:
Q  673 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||| |||||||| ||| |||||||||||||||||||  ||||||||||||    
T  28198435 aaatgtgtttttgttccttgcaaatatggcgagtttgaattttggtccctg 28198485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 670 - 716
Target Start/End: Original strand, 48856214 - 48856260
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttg 716  Q
    ||||||||||||||| |||| ||||||||||| |||||| |||||||    
T  48856214 ctaaaatatgtttttaatccttgcaaatatggtgagtttaggttttg 48856260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 678 - 723
Target Start/End: Original strand, 12360673 - 12360718
Alignment:
Q  678 tgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||||||||||||||||||||| |  |||| ||||||||||||||    
T  12360673 tgtttttgatccctgcaaatatgtcccgttttggttttggtccctg 12360718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 663 - 700
Target Start/End: Complemental strand, 17130088 - 17130051
Alignment:
Q  663 ataaagactaaaatatgtttttgatccctgcaaatatg 700  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  17130088 ataaagactaaaatatggttttggtccctgcaaatatg 17130051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 670 - 723
Target Start/End: Original strand, 24507481 - 24507534
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  24507481 ctaaaatatggttttgatccctgcaaatatgcctcgttttggttttagtccctg 24507534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 673 - 726
Target Start/End: Original strand, 27815446 - 27815499
Alignment:
Q  673 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||| || || ||||||||||||| || | |||||||||||||||||||||    
T  27815446 aaatatggttctggtccctgcaaatatagccaatttgggttttggtccctggta 27815499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 39162825 - 39162882
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaata-tggcgagtttgggttttggtccctggta 726  Q
    ||||| |||| ||||| |||||||||||| |||||||||||| ||||||||| |||||    
T  39162825 ctaaattatgcttttggtccctgcaaataatggcgagtttggattttggtccttggta 39162882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-19; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 665 - 723
Target Start/End: Original strand, 17516159 - 17516217
Alignment:
Q  665 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  17516159 aaagactaaaatatgtttttggtccctgcaaatatggtgagtttgggttttggtccctg 17516217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 17517366 - 17517310
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  17517366 ctaaaatatgtttttggtccctgcaaatatggcgagtttgagttttggtccctggta 17517310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 34998198 - 34998142
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  34998198 ctaaaatatgcttttgatccctgcaaatatagcgagtttgggttttggtccctggta 34998142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 670 - 723
Target Start/End: Original strand, 29291361 - 29291414
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||||||||||||    
T  29291361 ctaaaatatgcttttggtccttgcaaatatggcgagtttgggttttggtccctg 29291414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 671 - 723
Target Start/End: Complemental strand, 1171707 - 1171655
Alignment:
Q  671 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||    
T  1171707 taaaatatgtttttgatccctgcaaatataacgagtttggtttttggtccctg 1171655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 18810534 - 18810590
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||    
T  18810534 ctaaaatatgattttggtccctgcaaatatagtgagtttgggttttggtccctggta 18810590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 21165248 - 21165304
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  21165248 ctaaaatatgcttttggtccctgcaaatatagcgagtttgtgttttggtccctggta 21165304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 671 - 726
Target Start/End: Complemental strand, 3279555 - 3279500
Alignment:
Q  671 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||||||||||||||||||||||| |||||||||  ||||||| |||||||    
T  3279555 taaaatatgtttttgatccctgcaaatatagcgagtttgaattttggttcctggta 3279500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 670 - 723
Target Start/End: Complemental strand, 1974209 - 1974156
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||||||||||||| ||||||||| |||| |||| |||||||||||||    
T  1974209 ctaaaatatgtttttgatccttgcaaatatagcgaatttgagttttggtccctg 1974156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 665 - 726
Target Start/End: Original strand, 16995448 - 16995509
Alignment:
Q  665 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||| |||||||||||||||| |||||||||||||   || |||||||||||||||||||||    
T  16995448 aaaggctaaaatatgtttttggtccctgcaaatataaagaatttgggttttggtccctggta 16995509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 665 - 726
Target Start/End: Complemental strand, 25440735 - 25440674
Alignment:
Q  665 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||| |||||| ||| | |||||||||||||||||  |||||||||||||||    
T  25440735 aaagactaaaatatatttttggtccttacaaatatggcgagtttgaattttggtccctggta 25440674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 20393325 - 20393269
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||  ||||||||||    
T  20393325 ctaaaatatgcttttgatccctgcaaatatagcgaatttgggtttcagtccctggta 20393269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 663 - 715
Target Start/End: Original strand, 20895953 - 20896005
Alignment:
Q  663 ataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggtttt 715  Q
    ||||||||||||||||||||||| ||||||||||||| |||| |||| |||||    
T  20895953 ataaagactaaaatatgtttttggtccctgcaaatatagcgaatttgagtttt 20896005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 20897554 - 20897498
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| | || |||||||||||||||||||||    
T  20897554 ctaaaatatggttttggtccctgcaaatatagtgaatttgggttttggtccctggta 20897498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 21953208 - 21953264
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| |||| ||||| |||||||||||||||    
T  21953208 ctaaaatatgcttttggtccctgcaaatatagcgaatttggattttggtccctggta 21953264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 659 - 719
Target Start/End: Complemental strand, 30253607 - 30253547
Alignment:
Q  659 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtc 719  Q
    ||||| ||||||||||||||||||||| ||||||||||||  |||||| || |||||||||    
T  30253607 taaaaaaaagactaaaatatgtttttggtccctgcaaatacagcgagtatgagttttggtc 30253547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 34995116 - 34995172
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||||||||||||||||| |||| |||| |||||||| |||||||    
T  34995116 ctaaaatatgcttttgatccctgcaaatatagcgaatttgagttttggttcctggta 34995172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 1972402 - 1972458
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| ||||||||||||  |||| |||||||||| ||| ||||||    
T  1972402 ctaaaatatgtttttggtccctgcaaataaagcgaatttgggttttagtctctggta 1972458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 722
Target Start/End: Original strand, 3276369 - 3276421
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    |||||||||||||||| ||||||||||||| |||| ||||| |||| ||||||    
T  3276369 ctaaaatatgtttttggtccctgcaaatatagcgaatttggattttagtccct 3276421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 667 - 723
Target Start/End: Original strand, 13617528 - 13617584
Alignment:
Q  667 agactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||||||||||| ||||| ||||||||||||||||  |||| |||||| |||||||    
T  13617528 agactaaaatatggttttggtccctgcaaatatggctcgttttggttttagtccctg 13617584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 671 - 722
Target Start/End: Original strand, 20391217 - 20391268
Alignment:
Q  671 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    ||||||||| ||||| ||||||||||||| | || |||||||||||||||||    
T  20391217 taaaatatgcttttggtccctgcaaatatagtgaatttgggttttggtccct 20391268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 670 - 723
Target Start/End: Complemental strand, 17000334 - 17000281
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||  ||||| ||||||||||| | | |||||||||||||||||||||    
T  17000334 ctaaaatatacttttggtccctgcaaatgtagtgagtttgggttttggtccctg 17000281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 659 - 700
Target Start/End: Original strand, 19320758 - 19320799
Alignment:
Q  659 taaaataaagactaaaatatgtttttgatccctgcaaatatg 700  Q
    |||||||| |||||||||||| ||||| ||||||||||||||    
T  19320758 taaaataatgactaaaatatggttttggtccctgcaaatatg 19320799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 670 - 723
Target Start/End: Original strand, 31198617 - 31198670
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||| ||||| ||||||||||||||||  |||| |||||| |||||||    
T  31198617 ctaaaatatggttttggtccctgcaaatatggctcgttttggttttagtccctg 31198670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-19; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 664 - 726
Target Start/End: Original strand, 3936574 - 3936636
Alignment:
Q  664 taaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  3936574 taaaggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttggtccctggta 3936636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 667 - 726
Target Start/End: Complemental strand, 3205162 - 3205103
Alignment:
Q  667 agactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  3205162 agactaaaatatgcttttgatccctgcaaatatgatgagtttgggttttggtccctggta 3205103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 665 - 726
Target Start/End: Complemental strand, 27571191 - 27571130
Alignment:
Q  665 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||| |||||||||| ||||| ||||||||||||| |||||||||||||||| |||||||||    
T  27571191 aaaggctaaaatatgattttggtccctgcaaatatagcgagtttgggttttgatccctggta 27571130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 4565395 - 4565451
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||  ||||| ||||||| ||||||||||||||||||||||||||    
T  4565395 ctaaaatatgtttttagtccctacaaatatagcgagtttgggttttggtccctggta 4565451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 6894067 - 6894011
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  6894067 ctaaaatatgtttttggtccttgcaaatatgacgagtttaggttttggtccctggta 6894011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 667 - 722
Target Start/End: Complemental strand, 15604117 - 15604063
Alignment:
Q  667 agactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    |||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||    
T  15604117 agactaaaatgtgtttttggtcc-tgcaaatatggcgagtttgggttttggtccct 15604063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 670 - 727
Target Start/End: Original strand, 14809165 - 14809222
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggtag 727  Q
    |||||||||||||||||||||| ||||||| |||| ||||| ||||||||||| ||||    
T  14809165 ctaaaatatgtttttgatccctacaaatatagcgaatttggattttggtccctagtag 14809222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 3954054 - 3954110
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| ||| |||||||||  ||| |||||||||||||||||||||    
T  3954054 ctaaaatatgtttttggtccttgcaaatatatcgaatttgggttttggtccctggta 3954110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 31540498 - 31540554
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| |||||||||||||  ||| ||||||||||||| |||||||    
T  31540498 ctaaaatatgtttttggtccctgcaaatataacgaatttgggttttggtacctggta 31540554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 31541679 - 31541623
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||||||||||||||||||||||||  ||| ||| |||||| ||||||||||    
T  31541679 ctaaaatatgtttttgatccctgcaaatataacgaattttggtttttgtccctggta 31541623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 670 - 721
Target Start/End: Original strand, 15599767 - 15599818
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccc 721  Q
    |||||||||| ||||| ||||| |||||||||||| ||||||||||||||||    
T  15599767 ctaaaatatgcttttggtccctacaaatatggcgaatttgggttttggtccc 15599818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 665 - 722
Target Start/End: Complemental strand, 34911890 - 34911833
Alignment:
Q  665 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    |||| |||||||||| ||||| ||||||||||||| |||||||||| ||||| |||||    
T  34911890 aaaggctaaaatatgattttggtccctgcaaatatagcgagtttggattttgatccct 34911833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 3938117 - 3938061
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||  ||||||||||||| || ||||| |||||||||||||||||    
T  3938117 ctaaaatatgcttttagtccctgcaaatatagcaagtttaggttttggtccctggta 3938061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 718
Target Start/End: Original strand, 27097314 - 27097362
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggt 718  Q
    ||||||||||||||||||||| | ||||||||  |||||||||||||||    
T  27097314 ctaaaatatgtttttgatccccgtaaatatggtaagtttgggttttggt 27097362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 670 - 721
Target Start/End: Original strand, 27570058 - 27570109
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccc 721  Q
    |||||||||| ||||| ||| ||||||||| |||||||||||||||| ||||    
T  27570058 ctaaaatatgattttggtccttgcaaatatagcgagtttgggttttgttccc 27570109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 665 - 723
Target Start/End: Complemental strand, 6912860 - 6912802
Alignment:
Q  665 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||||||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  6912860 aaagactaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctg 6912802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 670 - 708
Target Start/End: Original strand, 25252643 - 25252681
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagttt 708  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  25252643 ctaaaatatgtttttgatctctgcaaatatagcgagttt 25252681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 660 - 726
Target Start/End: Complemental strand, 25254198 - 25254132
Alignment:
Q  660 aaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||| || ||||||||||| ||||| |||||||||||||   ||||||| |||||| |||||||||    
T  25254198 aaaattaaaactaaaatatgcttttggtccctgcaaatatatagagtttgagttttgatccctggta 25254132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 670 - 708
Target Start/End: Original strand, 25316428 - 25316466
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagttt 708  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  25316428 ctaaaatatgtttttgatctctgcaaatatagcgagttt 25316466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 660 - 726
Target Start/End: Complemental strand, 25317988 - 25317922
Alignment:
Q  660 aaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||| || ||||||||||| ||||| |||||||||||||   ||||||| |||||| |||||||||    
T  25317988 aaaattaaaactaaaatatgcttttggtccctgcaaatatatagagtttgagttttgatccctggta 25317922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 661 - 723
Target Start/End: Complemental strand, 40764787 - 40764725
Alignment:
Q  661 aaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  40764787 aaataaaggctaaaatatggttttgctccctgcaaatatgcctcgttttggttttagtccctg 40764725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 658 - 723
Target Start/End: Original strand, 19565457 - 19565522
Alignment:
Q  658 ttaaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||||| ||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  19565457 ttaaaatcaaggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctg 19565522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 670 - 719
Target Start/End: Original strand, 34910595 - 34910643
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtc 719  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||    
T  34910595 ctaaaatatgttttt-atccctgcaaatatagcaagtttgagttttggtc 34910643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 6e-19; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 665 - 726
Target Start/End: Complemental strand, 22534784 - 22534723
Alignment:
Q  665 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  22534784 aaaggctaaaatatgcttttgatccctgcaaatatagcgagtttgggttttggtccctggta 22534723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 659 - 726
Target Start/End: Complemental strand, 10718516 - 10718449
Alignment:
Q  659 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||| || |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  10718516 taaaatataggctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggta 10718449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 667 - 723
Target Start/End: Original strand, 3483632 - 3483688
Alignment:
Q  667 agactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||    
T  3483632 agactaaaatatgtttttggtccctgcaaatatagcgagtttgagttttggtccctg 3483688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 10717123 - 10717179
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  10717123 ctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggta 10717179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 670 - 722
Target Start/End: Original strand, 14197827 - 14197879
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  14197827 ctaaaatatgtttttggtccctgcaaatatggcgagtttggattttggtccct 14197879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1038 - 1118
Target Start/End: Original strand, 17032022 - 17032100
Alignment:
Q  1038 gagaaatttaaagagttagaaaattgaaatgtaatttaaaaggaaaattataaagcactaataacaaaaagattgttacaa 1118  Q
    |||||||||||| |||||||||||||||||||| ||||||||| |||||||||| |||||||||| ||||||  |||||||    
T  17032022 gagaaatttaaa-agttagaaaattgaaatgtattttaaaaggcaaattataaa-cactaataactaaaagagagttacaa 17032100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1038 - 1118
Target Start/End: Original strand, 17562458 - 17562536
Alignment:
Q  1038 gagaaatttaaagagttagaaaattgaaatgtaatttaaaaggaaaattataaagcactaataacaaaaagattgttacaa 1118  Q
    |||||||||||| |||||||||||||||||||| ||||||||| |||||||||| |||||||||| ||||||  |||||||    
T  17562458 gagaaatttaaa-agttagaaaattgaaatgtattttaaaaggcaaattataaa-cactaataactaaaagagagttacaa 17562536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 670 - 722
Target Start/End: Complemental strand, 28998050 - 28997998
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  28998050 ctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttggtccct 28997998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 665 - 726
Target Start/End: Original strand, 36588219 - 36588280
Alignment:
Q  665 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||| |||||||||| ||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  36588219 aaaggctaaaatatgcttttggtccctgcaaatatagcgagtttgcgttttggtccctggta 36588280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 28996836 - 28996892
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||    
T  28996836 ctaaaatatgattttggtccctgcaaatatagtgagtttgggttttggtccctggta 28996892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 670 - 725
Target Start/End: Complemental strand, 45518017 - 45517962
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggt 725  Q
    |||||||||| ||||| ||||||||| ||| |||||||||||||||||||||||||    
T  45518017 ctaaaatatgcttttggtccctgcaagtatagcgagtttgggttttggtccctggt 45517962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 670 - 723
Target Start/End: Complemental strand, 1420499 - 1420446
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||||||||| ||||||||||||| |||||||||| | ||||||||||    
T  1420499 ctaaaatatgtttttggtccctgcaaatatagcgagtttggatattggtccctg 1420446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 665 - 726
Target Start/End: Original strand, 22533314 - 22533375
Alignment:
Q  665 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||| |||||||||| ||||| |||||| | |||| ||||||||||||||||||||||||||    
T  22533314 aaaggctaaaatatgcttttggtccctgtatatatagcgagtttgggttttggtccctggta 22533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 670 - 723
Target Start/End: Complemental strand, 39440479 - 39440426
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||| ||||| ||| ||||||||||||||||||| |||||||||||||    
T  39440479 ctaaaatatgcttttggtccttgcaaatatggcgagtttgagttttggtccctg 39440426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 4182624 - 4182680
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| |||||| |||||| |||| |||||||||||||||||||||    
T  4182624 ctaaaatatgcttttggtccctgtaaatatagcgaatttgggttttggtccctggta 4182680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 22270945 - 22271001
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||||||||||||||||| |||| ||||| |||| ||||||||||    
T  22270945 ctaaaatatgcttttgatccctgcaaatatagcgaatttggattttagtccctggta 22271001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 22272327 - 22272271
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| |||| |||||||| |||| |||||||||||||||||||||    
T  22272327 ctaaaatatgcttttggtccccgcaaatatagcgaatttgggttttggtccctggta 22272271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 39439926 - 39439982
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| |||||||||||||||| |||||| ||||||| ||||||||    
T  39439926 ctaaaatatgattttggtccctgcaaatatggctagtttgagttttggaccctggta 39439982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 660 - 723
Target Start/End: Original strand, 10872907 - 10872970
Alignment:
Q  660 aaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||||||| |||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  10872907 aaaataaaggctaaaatatggttttgatccctgcaaatatgcctcgttttggttttagtccctg 10872970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 670 - 723
Target Start/End: Complemental strand, 3680799 - 3680746
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||| |||||||||||||||||||| |  |||| ||||||||||||||    
T  3680799 ctaaaatatgattttgatccctgcaaatatgcctcgttttggttttggtccctg 3680746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1056 - 1109
Target Start/End: Complemental strand, 17030627 - 17030575
Alignment:
Q  1056 gaaaattgaaatgtaatttaaaaggaaaattataaagcactaataacaaaaaga 1109  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  17030627 gaaaactgaaatgtattttaaaaggaaaattataaa-cactaataactaaaaga 17030575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1056 - 1109
Target Start/End: Complemental strand, 17561063 - 17561011
Alignment:
Q  1056 gaaaattgaaatgtaatttaaaaggaaaattataaagcactaataacaaaaaga 1109  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  17561063 gaaaactgaaatgtattttaaaaggaaaattataaa-cactaataactaaaaga 17561011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 665 - 726
Target Start/End: Original strand, 45516394 - 45516455
Alignment:
Q  665 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||||||||||||||  ||| || |||||| |||| |||||||||||||| ||||||    
T  45516394 aaagactaaaatatgtttttagtccatgtaaatatagcgaatttgggttttggtctctggta 45516455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 3031600 - 3031544
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| |||||| |||||||||   ||| |||||||||||||||||    
T  3031600 ctaaaatatgtttttggtccctgtaaatatggctcatttaggttttggtccctggta 3031544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 4184036 - 4183980
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||  ||||||||||||| | | ||||||||||||||||||||||    
T  4184036 ctaaaatatgcttttagtccctgcaaatatagtgcgtttgggttttggtccctggta 4183980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 658 - 722
Target Start/End: Complemental strand, 27117986 - 27117922
Alignment:
Q  658 ttaaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    ||||||||||| |||||||||| ||||| |||||||||||||| |   ||| |||||||||||||    
T  27117986 ttaaaataaaggctaaaatatggttttggtccctgcaaatatgcctcattttggttttggtccct 27117922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 30124280 - 30124224
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||  || |||||| ||||||||||||||||    
T  30124280 ctaaaatatgcttttggtccctgcaaataaagcaagtttgagttttggtccctggta 30124224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 38456787 - 38456731
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| || | ||| |||||||||||||||||    
T  38456787 ctaaaatatgcttttggtccctgcaaatatagcaaatttaggttttggtccctggta 38456731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 38658483 - 38658539
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| || || ||| ||||||||| |||| |||||||||||||||||||||    
T  38658483 ctaaaatatgcttctggtccatgcaaatatagcgaatttgggttttggtccctggta 38658539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 664 - 723
Target Start/End: Original strand, 20984142 - 20984201
Alignment:
Q  664 taaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||| |||||||||| ||||| ||||||||||||||||  |||| |||||| |||||||    
T  20984142 taaaggctaaaatatggttttggtccctgcaaatatggctcgttttggttttagtccctg 20984201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 671 - 718
Target Start/End: Complemental strand, 41357422 - 41357375
Alignment:
Q  671 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggt 718  Q
    ||||||||||||||| |||  |||||||||| ||||||||||||||||    
T  41357422 taaaatatgtttttggtcctcgcaaatatggtgagtttgggttttggt 41357375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 668 - 722
Target Start/End: Original strand, 38455447 - 38455501
Alignment:
Q  668 gactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    |||||||||||||||||| ||| ||||||||| | || |||| ||||||||||||    
T  38455447 gactaaaatatgtttttggtccttgcaaatatagtgaatttgagttttggtccct 38455501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 673 - 726
Target Start/End: Original strand, 1376940 - 1376993
Alignment:
Q  673 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||| ||||| ||||||||||||| || | ||||| |||||||||||||||    
T  1376940 aaatatgattttggtccctgcaaatatagccaatttggattttggtccctggta 1376993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 673 - 726
Target Start/End: Complemental strand, 1385609 - 1385556
Alignment:
Q  673 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||| ||||| ||||||||||||| || | ||||| |||||||||||||||    
T  1385609 aaatatggttttggtccctgcaaatatagccaatttggattttggtccctggta 1385556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 670 - 723
Target Start/End: Complemental strand, 4474042 - 4473989
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  4474042 ctaaaatatggttttgatccctgcaaatatgcctcgttttggttttagtccctg 4473989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 658 - 723
Target Start/End: Original strand, 28346384 - 28346449
Alignment:
Q  658 ttaaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||||| ||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  28346384 ttaaaattaaggctaaaatatggttttggtccctgcaaatatgcctcgttttggttttagtccctg 28346449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 665 - 726
Target Start/End: Complemental strand, 36589449 - 36589388
Alignment:
Q  665 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||| |||||||||| ||||  | ||||||||||| |||||||| ||||||||||| |||||    
T  36589449 aaaggctaaaatatgattttagttcctgcaaatatagcgagtttaggttttggtccttggta 36589388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 2e-18; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 33137285 - 33137229
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  33137285 ctaaaatatgtttttgatccctgcaaatatagcgagtttgggttttagtccctggta 33137229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 3879088 - 3879144
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||    
T  3879088 ctaaaatatgcttttgatccctgcaaatatagcgagtttggattttggtccctggta 3879144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 22204057 - 22204113
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||    
T  22204057 ctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttagtccctggta 22204113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 42359403 - 42359347
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||    
T  42359403 ctaaaatatgtttttggtccctgcaaatatagcgagtttggattttggtccctggta 42359347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 54121757 - 54121701
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  54121757 ctaaaatatgattttgctccctgcaaatacggcgagtttgggttttggtccctggta 54121701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 722
Target Start/End: Complemental strand, 3880553 - 3880501
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    |||||||||||||||| | ||||||||||| ||||||||||||||||||||||    
T  3880553 ctaaaatatgtttttggttcctgcaaatatagcgagtttgggttttggtccct 3880501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 662 - 726
Target Start/End: Complemental strand, 29060947 - 29060883
Alignment:
Q  662 aataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||| ||||||||||||||| |||||||||||||| |||||||||  ||||||||| |||||    
T  29060947 aataaaggctaaaatatgtttttaatccctgcaaatatagcgagtttgaattttggtccttggta 29060883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 722
Target Start/End: Complemental strand, 32699371 - 32699319
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    |||||||||||||||| |||||| |||||| ||||||||||||||||||||||    
T  32699371 ctaaaatatgtttttggtccctgtaaatatagcgagtttgggttttggtccct 32699319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 722
Target Start/End: Original strand, 33134893 - 33134945
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    ||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  33134893 ctaaaatatgtttttgatccctgcaaatatgacgagtttggatattggtccct 33134945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 45618287 - 45618343
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||| ||||| ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  45618287 ctaatatatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggta 45618343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 671 - 726
Target Start/End: Complemental strand, 17371901 - 17371846
Alignment:
Q  671 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||| |||||||||||||||||||  ||| |||||||||||||||||||||    
T  17371901 taaaatatgcttttgatccctgcaaatataacgaatttgggttttggtccctggta 17371846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 661 - 723
Target Start/End: Original strand, 34659699 - 34659761
Alignment:
Q  661 aaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||| ||| |||||||||| ||||| |||||||||||||||||||||  ||||||||||||||    
T  34659699 aaatgaaggctaaaatatgcttttggtccctgcaaatatggcgagttaaggttttggtccctg 34659761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 666 - 719
Target Start/End: Complemental strand, 41935131 - 41935078
Alignment:
Q  666 aagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtc 719  Q
    |||| ||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  41935131 aagattaaaatatgtttttggtccctgcaaatataacgagtttgggttttggtc 41935078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 665 - 726
Target Start/End: Complemental strand, 55542641 - 55542580
Alignment:
Q  665 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||| ||||||| |||||||||||||||||||||| ||  ||||||| ||||||||||||||    
T  55542641 aaaggctaaaatctgtttttgatccctgcaaatatagcatgtttgggatttggtccctggta 55542580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 19674416 - 19674472
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||| ||||||||| ||||||||| ||||||||||||||||    
T  19674416 ctaaaatatgcttttggtccttgcaaatatagcgagtttgagttttggtccctggta 19674472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 718
Target Start/End: Original strand, 38166497 - 38166545
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggt 718  Q
    ||||||||||||||| |||||||||||||| |||||||||| |||||||    
T  38166497 ctaaaatatgtttttaatccctgcaaatatagcgagtttggattttggt 38166545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 658 - 726
Target Start/End: Original strand, 42358022 - 42358090
Alignment:
Q  658 ttaaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||| |||| |||||||||||||||| ||||||||||||| |  |||||| |||||| |||||||||    
T  42358022 ttaaaaaaaaggctaaaatatgtttttggtccctgcaaatataggaagtttgagttttgatccctggta 42358090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 45619788 - 45619732
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||  ||||||||||||| |||||||| ||||||| |||||||||    
T  45619788 ctaaaatatgtttttagtccctgcaaatatagcgagtttaggttttgttccctggta 45619732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 687 - 726
Target Start/End: Original strand, 40198593 - 40198632
Alignment:
Q  687 tccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  40198593 tccctgcaaatatagcgagtttgggttttggtccctggta 40198632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 664 - 726
Target Start/End: Original strand, 16573374 - 16573436
Alignment:
Q  664 taaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||| |||||||||| ||||| || || |||||||||||| |||||||||||||| ||||||    
T  16573374 taaaggctaaaatatgcttttggtctctacaaatatggcgaatttgggttttggtctctggta 16573436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 41933820 - 41933870
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtcc 720  Q
    |||||||||| ||||| || |||||||||| ||||||||||||||||||||    
T  41933820 ctaaaatatgattttggtctctgcaaatatagcgagtttgggttttggtcc 41933870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 670 - 707
Target Start/End: Complemental strand, 5259208 - 5259171
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtt 707  Q
    |||||||||||||||| |||||||||||||||||||||    
T  5259208 ctaaaatatgtttttggtccctgcaaatatggcgagtt 5259171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 670 - 723
Target Start/End: Complemental strand, 19675677 - 19675624
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||| ||||| |||||||||||||  ||||||||| ||||||||||||    
T  19675677 ctaaaatatgcttttggtccctgcaaatataacgagtttggattttggtccctg 19675624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 667 - 719
Target Start/End: Original strand, 16916066 - 16916118
Alignment:
Q  667 agactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtc 719  Q
    ||||||||||||  ||||| ||||||||||||||| ||||||| |||||||||    
T  16916066 agactaaaatatacttttggtccctgcaaatatggtgagtttgagttttggtc 16916118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 660 - 723
Target Start/End: Original strand, 26412182 - 26412245
Alignment:
Q  660 aaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||| || |||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  26412182 aaaatataggctaaaatatggttttgatccctgcaaatatgtctcgttttggttttagtccctg 26412245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 670 - 724
Target Start/End: Original strand, 4211563 - 4211617
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctgg 724  Q
    |||||||||| ||||| |||||||||||||| |  |||| |||||||||||||||    
T  4211563 ctaaaatatggttttggtccctgcaaatatgcctcgttttggttttggtccctgg 4211617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 670 - 723
Target Start/End: Complemental strand, 12152491 - 12152438
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||| ||||| |||||||||||||| |  |||| ||||||||||||||    
T  12152491 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttggtccctg 12152438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 670 - 723
Target Start/End: Original strand, 14487804 - 14487857
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||| ||||| |||||||||||||| |  |||| ||||||||||||||    
T  14487804 ctaaaatatggttttggtccctgcaaatatgcctcgttttggttttggtccctg 14487857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 662 - 723
Target Start/End: Complemental strand, 14791812 - 14791751
Alignment:
Q  662 aataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  14791812 aataaaggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctg 14791751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 665 - 726
Target Start/End: Original strand, 17281568 - 17281629
Alignment:
Q  665 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||| ||||||| || ||||  ||||||||||||| |||| ||||| |||||||||||||||    
T  17281568 aaaggctaaaatgtgcttttagtccctgcaaatatagcgaatttggattttggtccctggta 17281629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 665 - 726
Target Start/End: Original strand, 17370070 - 17370131
Alignment:
Q  665 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||| ||||||| || ||||  ||||||||||||| |||| ||||| |||||||||||||||    
T  17370070 aaaggctaaaatgtgcttttagtccctgcaaatatagcgaatttggattttggtccctggta 17370131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 670 - 723
Target Start/End: Complemental strand, 23245593 - 23245540
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  23245593 ctaaaatatggttttgatccctgcaaatatgtctcgttttggttttagtccctg 23245540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 670 - 723
Target Start/End: Complemental strand, 26412582 - 26412529
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||| ||||| ||||||||||||||||  |||| |||||| |||||||    
T  26412582 ctaaaatatggttttggtccctgcaaatatggctcgttttggttttagtccctg 26412529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 662 - 723
Target Start/End: Complemental strand, 30046798 - 30046737
Alignment:
Q  662 aataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  30046798 aataaaggctaaaatatggttttggtccctgcaaatatgcctcgttttggttttagtccctg 30046737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 662 - 723
Target Start/End: Complemental strand, 30061139 - 30061078
Alignment:
Q  662 aataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  30061139 aataaaggctaaaatatggttttggtccctgcaaatatgcctcgttttggttttagtccctg 30061078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 670 - 715
Target Start/End: Original strand, 32698001 - 32698046
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggtttt 715  Q
    |||||||||| ||||||||||||||||||| |||| ||| ||||||    
T  32698001 ctaaaatatgattttgatccctgcaaatatagcgaatttaggtttt 32698046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 662 - 723
Target Start/End: Complemental strand, 43231395 - 43231334
Alignment:
Q  662 aataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  43231395 aataaaggctaaaatatggttttggtccctgcaaatatgcctcgttttggttttagtccctg 43231334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 670 - 723
Target Start/End: Original strand, 46292394 - 46292447
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||| ||||| |||||||||||||| |  |||| ||||||||||||||    
T  46292394 ctaaaatatggttttggtccctgcaaatatgcctcgttttggttttggtccctg 46292447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 46; Significance: 2e-16; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 673 - 726
Target Start/End: Original strand, 344942 - 344995
Alignment:
Q  673 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  344942 aaatatgattttggtccctgcaaatatggcgagtttgggttttggtccctggta 344995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 670 - 722
Target Start/End: Original strand, 374337 - 374389
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  374337 ctaaaatatgattttgatccctgcaaatatagcgagtttgggttttggtccct 374389  T

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Target: scaffold0002; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 722
Target Start/End: Complemental strand, 345954 - 345902
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    |||||||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  345954 ctaaaatatgtttttggtccctgcaaatatagcgaatttgggttttggtccct 345902  T

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Target: scaffold0002; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 670 - 715
Target Start/End: Complemental strand, 376426 - 376381
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggtttt 715  Q
    |||||||||| ||||| ||||||||||||| |||||||||||||||    
T  376426 ctaaaatatgcttttggtccctgcaaatatagcgagtttgggtttt 376381  T

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Target: scaffold0562 (Bit Score: 45; Significance: 6e-16; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 9924 - 9980
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||    
T  9924 ctaaaatatgcttttgatccctgcaaatatagcgagtttggattttggtccctggta 9980  T

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Target: scaffold0517 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 11579 - 11523
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||||||||| ||||||||||||| |||  |||||||||||||||||||||    
T  11579 ctaaaatatgtttttggtccctgcaaatatagcgtatttgggttttggtccctggta 11523  T

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Target: scaffold0517; HSP #2
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 10317 - 10373
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| |||| |||| |||||||||| |||||    
T  10317 ctaaaatatgcttttggtccctgcaaatatagcgaatttgagttttggtccttggta 10373  T

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Target: scaffold0230 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 488 - 432
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||    
T  488 ctaaaatatgattttggtccctgcaaatatagtgagtttgggttttggtccctggta 432  T

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Target: scaffold0106 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 30964 - 30908
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||    
T  30964 ctaaaatatggttttggtccctgcaaatatagtgagtttgggttttggtccctggta 30908  T

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Target: scaffold0106; HSP #2
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 29731 - 29787
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||   ||||||||| |||||||||||||||    
T  29731 ctaaaatatgcttttggtccctgcaaataaaacgagtttggattttggtccctggta 29787  T

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Target: scaffold0001 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 121042 - 120986
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| |||||||||||||  |||||||||||||||||||||||||    
T  121042 ctaaaatatgcttttggtccctgcaaatataacgagtttgggttttggtccctggta 120986  T

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Target: scaffold0001; HSP #2
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 119595 - 119651
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| ||||||||||||| |||| |||| ||||||||||||||||    
T  119595 ctaaaatatgcttttggtccctgcaaatatagcgaatttgagttttggtccctggta 119651  T

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Target: scaffold0095 (Bit Score: 38; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 670 - 723
Target Start/End: Complemental strand, 42812 - 42759
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    |||||||||| ||||| ||| ||||||||||||||||||| |||||||||||||    
T  42812 ctaaaatatgcttttggtccttgcaaatatggcgagtttgagttttggtccctg 42759  T

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Target: scaffold0516 (Bit Score: 37; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 670 - 722
Target Start/End: Complemental strand, 1192 - 1140
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    ||||||||| |||||| || |||||||||||||||||||| ||||||||||||    
T  1192 ctaaaatatatttttggtctctgcaaatatggcgagtttgagttttggtccct 1140  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 670 - 726
Target Start/End: Original strand, 202581 - 202637
Alignment:
Q  670 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 726  Q
    |||||||||| ||||| |||||||||||||  ||||||||| |||||||||| ||||    
T  202581 ctaaaatatgcttttggtccctgcaaatataacgagtttggattttggtcccgggta 202637  T

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Target: scaffold0765 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 671 - 722
Target Start/End: Original strand, 1863 - 1914
Alignment:
Q  671 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 722  Q
    ||||||||| ||||| ||||||||||||| ||||||||| |||||| |||||    
T  1863 taaaatatgattttggtccctgcaaatatagcgagtttgagttttgatccct 1914  T

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Target: scaffold0176 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 658 - 700
Target Start/End: Original strand, 21686 - 21728
Alignment:
Q  658 ttaaaataaagactaaaatatgtttttgatccctgcaaatatg 700  Q
    |||||| |||| |||||||||| ||||||||||||||||||||    
T  21686 ttaaaaaaaaggctaaaatatggttttgatccctgcaaatatg 21728  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 662 - 723
Target Start/End: Original strand, 47919 - 47980
Alignment:
Q  662 aataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 723  Q
    ||||||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  47919 aataaaggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctg 47980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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