View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6353_low_10 (Length: 382)

Name: NF6353_low_10
Description: NF6353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6353_low_10
NF6353_low_10
[»] chr7 (66 HSPs)
chr7 (11-160)||(15128979-15129128)
chr7 (168-317)||(816191-816342)
chr7 (159-317)||(22486372-22486533)
chr7 (159-297)||(2457649-2457787)
chr7 (168-317)||(24605826-24605977)
chr7 (168-317)||(47523650-47523801)
chr7 (168-319)||(37135283-37135436)
chr7 (168-319)||(40847433-40847586)
chr7 (160-317)||(31425511-31425671)
chr7 (168-317)||(23232027-23232178)
chr7 (168-297)||(31042239-31042370)
chr7 (158-320)||(15014402-15014567)
chr7 (168-287)||(22501582-22501703)
chr7 (168-317)||(1907343-1907494)
chr7 (180-317)||(23750736-23750875)
chr7 (168-297)||(36636494-36636625)
chr7 (160-287)||(10050866-10050996)
chr7 (160-317)||(21917334-21917494)
chr7 (160-317)||(27805997-27806157)
chr7 (161-318)||(11036488-11036647)
chr7 (168-317)||(28800866-28801017)
chr7 (161-317)||(18217810-18217968)
chr7 (168-317)||(10222630-10222780)
chr7 (175-318)||(39979623-39979768)
chr7 (168-318)||(20174008-20174160)
chr7 (175-317)||(23577189-23577333)
chr7 (168-317)||(7733312-7733463)
chr7 (168-319)||(20429453-20429606)
chr7 (184-318)||(1842898-1843034)
chr7 (161-318)||(42926418-42926578)
chr7 (168-318)||(48933124-48933276)
chr7 (189-318)||(3904477-3904608)
chr7 (189-318)||(4514774-4514905)
chr7 (168-317)||(20923958-20924109)
chr7 (160-292)||(38057611-38057746)
chr7 (161-317)||(23699825-23699983)
chr7 (161-297)||(24140431-24140569)
chr7 (160-318)||(9698537-9698698)
chr7 (168-289)||(26415412-26415535)
chr7 (189-317)||(3872187-3872317)
chr7 (160-317)||(21871552-21871707)
chr7 (160-318)||(33427669-33427829)
chr7 (180-317)||(6849211-6849350)
chr7 (193-297)||(11852021-11852127)
chr7 (160-317)||(15969765-15969924)
chr7 (190-317)||(21623031-21623159)
chr7 (202-317)||(23539254-23539371)
chr7 (158-316)||(27132722-27132883)
chr7 (168-315)||(32267335-32267483)
chr7 (189-318)||(1824199-1824330)
chr7 (202-319)||(2650826-2650945)
chr7 (160-258)||(25777173-25777272)
chr7 (205-313)||(27304895-27305005)
chr7 (189-320)||(26577274-26577407)
chr7 (180-258)||(45664768-45664846)
chr7 (169-287)||(11890177-11890297)
chr7 (202-320)||(14786632-14786752)
chr7 (168-317)||(36993808-36993959)
chr7 (168-246)||(27130322-27130398)
chr7 (168-257)||(687865-687954)
chr7 (189-317)||(2093362-2093492)
chr7 (52-133)||(15107469-15107551)
chr7 (318-364)||(15129126-15129172)
chr7 (207-239)||(5235420-5235452)
chr7 (175-250)||(15330274-15330349)
chr7 (155-188)||(26577254-26577287)
[»] chr6 (77 HSPs)
chr6 (168-297)||(12844991-12845122)
chr6 (158-321)||(28364888-28365054)
chr6 (160-317)||(9892942-9893102)
chr6 (160-318)||(15364457-15364618)
chr6 (160-318)||(22579348-22579509)
chr6 (161-317)||(9885224-9885382)
chr6 (155-289)||(12680212-12680349)
chr6 (168-318)||(22083826-22083978)
chr6 (168-317)||(6598452-6598603)
chr6 (168-317)||(12951696-12951847)
chr6 (160-318)||(11049750-11049911)
chr6 (159-293)||(12351610-12351747)
chr6 (168-287)||(21691526-21691647)
chr6 (168-319)||(24661007-24661160)
chr6 (175-314)||(25397997-25398138)
chr6 (160-318)||(1939241-1939401)
chr6 (168-297)||(2992603-2992734)
chr6 (168-317)||(14886549-14886700)
chr6 (161-317)||(18048768-18048927)
chr6 (160-318)||(21990174-21990333)
chr6 (160-317)||(20182124-20182284)
chr6 (168-314)||(21140927-21141075)
chr6 (160-317)||(22153707-22153867)
chr6 (160-317)||(26224407-26224567)
chr6 (180-317)||(495627-495766)
chr6 (159-287)||(27705400-27705531)
chr6 (161-313)||(12157380-12157534)
chr6 (168-316)||(27796835-27796985)
chr6 (159-317)||(2669287-2669448)
chr6 (168-317)||(18033526-18033676)
chr6 (168-319)||(33250706-33250859)
chr6 (202-316)||(5360431-5360547)
chr6 (175-293)||(23281781-23281901)
chr6 (168-317)||(12200682-12200833)
chr6 (168-319)||(6978267-6978418)
chr6 (175-319)||(11530220-11530366)
chr6 (168-319)||(18492357-18492510)
chr6 (160-317)||(16250802-16250961)
chr6 (180-317)||(30833960-30834099)
chr6 (168-319)||(12160845-12160997)
chr6 (190-317)||(15448395-15448524)
chr6 (161-246)||(14036601-14036686)
chr6 (189-314)||(11077658-11077785)
chr6 (189-317)||(12499225-12499356)
chr6 (189-317)||(12506554-12506685)
chr6 (189-317)||(12509545-12509676)
chr6 (168-317)||(17919524-17919675)
chr6 (168-317)||(26939575-26939726)
chr6 (189-311)||(5192195-5192319)
chr6 (168-276)||(5270380-5270491)
chr6 (175-258)||(343624-343707)
chr6 (189-317)||(6605496-6605626)
chr6 (168-307)||(22055622-22055763)
chr6 (183-297)||(12205205-12205321)
chr6 (189-319)||(15961405-15961537)
chr6 (168-288)||(9060079-9060200)
chr6 (189-297)||(14872128-14872238)
chr6 (169-297)||(16118135-16118265)
chr6 (158-287)||(2396180-2396313)
chr6 (212-319)||(28668132-28668241)
chr6 (189-258)||(13145011-13145080)
chr6 (189-311)||(20692817-20692941)
chr6 (208-297)||(15509184-15509275)
chr6 (166-244)||(11431715-11431793)
chr6 (210-317)||(14772691-14772800)
chr6 (168-250)||(19175846-19175927)
chr6 (170-243)||(3619619-3619692)
chr6 (202-320)||(6065459-6065579)
chr6 (189-258)||(33547555-33547624)
chr6 (189-314)||(11350191-11350315)
chr6 (176-242)||(13668071-13668137)
chr6 (161-316)||(28221573-28221730)
chr6 (236-320)||(8844165-8844252)
chr6 (218-316)||(10458802-10458902)
chr6 (194-258)||(30745780-30745842)
chr6 (219-258)||(3673194-3673233)
chr6 (202-318)||(10929495-10929614)
[»] chr4 (63 HSPs)
chr4 (168-318)||(22128311-22128463)
chr4 (159-317)||(19839155-19839316)
chr4 (168-317)||(1638433-1638584)
chr4 (160-319)||(46286227-46286389)
chr4 (160-318)||(55309211-55309373)
chr4 (159-317)||(27040025-27040186)
chr4 (159-317)||(33914035-33914196)
chr4 (168-297)||(38223496-38223627)
chr4 (168-318)||(2275676-2275829)
chr4 (159-317)||(8878859-8879020)
chr4 (168-319)||(30268986-30269139)
chr4 (168-319)||(30283050-30283203)
chr4 (180-319)||(32175735-32175876)
chr4 (161-310)||(39234921-39235071)
chr4 (160-317)||(5399586-5399746)
chr4 (160-317)||(5473826-5473986)
chr4 (161-319)||(18051818-18051978)
chr4 (167-317)||(22168253-22168405)
chr4 (160-297)||(25147698-25147838)
chr4 (175-317)||(36689670-36689814)
chr4 (168-317)||(9913244-9913395)
chr4 (160-316)||(24682328-24682485)
chr4 (159-312)||(37378628-37378784)
chr4 (189-318)||(38619854-38619985)
chr4 (190-318)||(4586757-4586887)
chr4 (189-317)||(38645757-38645887)
chr4 (160-318)||(13564914-13565075)
chr4 (160-318)||(19680423-19680584)
chr4 (168-258)||(22156662-22156752)
chr4 (168-249)||(37761912-37761993)
chr4 (190-319)||(13028814-13028945)
chr4 (204-317)||(18714924-18715039)
chr4 (189-317)||(9670479-9670609)
chr4 (190-318)||(25026565-25026695)
chr4 (175-318)||(25225092-25225235)
chr4 (165-317)||(30420033-30420187)
chr4 (202-317)||(9058952-9059069)
chr4 (168-287)||(18744100-18744221)
chr4 (168-318)||(16915355-16915507)
chr4 (168-310)||(30568006-30568150)
chr4 (180-318)||(45532578-45532718)
chr4 (175-318)||(44783475-44783621)
chr4 (189-292)||(9239306-9239411)
chr4 (189-317)||(7111946-7112076)
chr4 (175-319)||(12071955-12072101)
chr4 (189-297)||(12105990-12106099)
chr4 (189-297)||(29625332-29625442)
chr4 (189-317)||(30507994-30508124)
chr4 (202-317)||(9238625-9238742)
chr4 (169-316)||(29238410-29238559)
chr4 (189-318)||(4606828-4606959)
chr4 (160-258)||(3612972-3613071)
chr4 (190-317)||(54539294-54539423)
chr4 (189-250)||(14944753-14944814)
chr4 (190-317)||(45091282-45091398)
chr4 (190-316)||(4627079-4627207)
chr4 (210-287)||(313615-313694)
chr4 (189-297)||(34557190-34557300)
chr4 (212-317)||(42055427-42055534)
chr4 (178-240)||(4068749-4068811)
chr4 (189-287)||(6553811-6553911)
chr4 (205-258)||(23104371-23104424)
chr4 (203-243)||(1518313-1518353)
[»] chr5 (59 HSPs)
chr5 (168-297)||(27428032-27428163)
chr5 (168-319)||(33818559-33818712)
chr5 (168-318)||(16121838-16121990)
chr5 (161-318)||(12328225-12328384)
chr5 (161-319)||(7003728-7003886)
chr5 (159-317)||(7888775-7888936)
chr5 (168-318)||(618282-618434)
chr5 (159-317)||(12045705-12045866)
chr5 (158-320)||(17036409-17036574)
chr5 (180-319)||(17039629-17039770)
chr5 (168-319)||(20959496-20959649)
chr5 (168-317)||(36196382-36196533)
chr5 (168-317)||(36716200-36716351)
chr5 (168-318)||(25673228-25673379)
chr5 (159-317)||(8886851-8887012)
chr5 (168-320)||(10420249-10420403)
chr5 (189-318)||(746867-746998)
chr5 (168-317)||(2472714-2472865)
chr5 (189-318)||(10494746-10494877)
chr5 (189-318)||(25397787-25397918)
chr5 (160-318)||(35620343-35620503)
chr5 (175-318)||(13620126-13620271)
chr5 (175-317)||(23975630-23975775)
chr5 (168-317)||(8108860-8109011)
chr5 (168-317)||(11927786-11927937)
chr5 (168-317)||(15060961-15061112)
chr5 (168-317)||(36831890-36832041)
chr5 (189-317)||(38837671-38837801)
chr5 (168-250)||(17079393-17079475)
chr5 (175-318)||(23423755-23423900)
chr5 (168-317)||(5982633-5982785)
chr5 (189-318)||(40484053-40484184)
chr5 (189-317)||(16631874-16632004)
chr5 (156-319)||(17986704-17986870)
chr5 (190-317)||(26708585-26708714)
chr5 (190-317)||(26978319-26978448)
chr5 (175-318)||(28265474-28265619)
chr5 (168-317)||(13974078-13974229)
chr5 (190-319)||(24138839-24138970)
chr5 (159-316)||(33734974-33735132)
chr5 (160-317)||(23408959-23409120)
chr5 (176-258)||(32726787-32726869)
chr5 (168-258)||(33816819-33816909)
chr5 (160-297)||(3080716-3080856)
chr5 (168-317)||(25652583-25652734)
chr5 (189-317)||(4125188-4125318)
chr5 (158-247)||(18413533-18413623)
chr5 (175-289)||(20187969-20188085)
chr5 (189-292)||(17771993-17772098)
chr5 (160-237)||(29727928-29728006)
chr5 (175-242)||(22649406-22649473)
chr5 (160-238)||(31158634-31158712)
chr5 (175-316)||(16472182-16472325)
chr5 (189-314)||(35778150-35778277)
chr5 (195-249)||(31853158-31853212)
chr5 (213-318)||(23974575-23974682)
chr5 (189-317)||(36597340-36597470)
chr5 (196-242)||(26301919-26301965)
chr5 (190-242)||(5043588-5043640)
[»] chr8 (66 HSPs)
chr8 (160-318)||(3823110-3823271)
chr8 (168-319)||(17103863-17104016)
chr8 (161-317)||(17824616-17824772)
chr8 (161-317)||(24576024-24576182)
chr8 (168-319)||(15251589-15251740)
chr8 (158-321)||(27869213-27869379)
chr8 (158-321)||(18010056-18010221)
chr8 (168-319)||(19240853-19241006)
chr8 (168-319)||(19314037-19314190)
chr8 (160-317)||(4330955-4331115)
chr8 (161-317)||(29345049-29345208)
chr8 (160-315)||(37992076-37992234)
chr8 (167-317)||(8555304-8555456)
chr8 (160-318)||(4647754-4647915)
chr8 (168-319)||(21350464-21350617)
chr8 (189-296)||(26399028-26399137)
chr8 (160-318)||(33652544-33652705)
chr8 (168-319)||(40289419-40289571)
chr8 (168-317)||(17810284-17810435)
chr8 (190-319)||(19256220-19256351)
chr8 (168-317)||(27910764-27910915)
chr8 (168-317)||(27957183-27957334)
chr8 (189-317)||(32247916-32248046)
chr8 (177-317)||(43431559-43431701)
chr8 (159-317)||(22939289-22939450)
chr8 (159-317)||(24193196-24193357)
chr8 (168-297)||(6816403-6816534)
chr8 (190-317)||(11938753-11938881)
chr8 (161-318)||(9631382-9631542)
chr8 (175-317)||(16061939-16062083)
chr8 (189-318)||(19488060-19488191)
chr8 (189-318)||(30687943-30688074)
chr8 (179-318)||(6084245-6084384)
chr8 (190-318)||(30466953-30467083)
chr8 (155-318)||(32961631-32961797)
chr8 (190-317)||(5670169-5670298)
chr8 (168-315)||(9915043-9915191)
chr8 (202-317)||(25655858-25655975)
chr8 (189-319)||(23752284-23752416)
chr8 (168-317)||(29350909-29351061)
chr8 (168-317)||(6817040-6817191)
chr8 (168-289)||(31344200-31344323)
chr8 (160-279)||(5879181-5879303)
chr8 (157-320)||(18844541-18844707)
chr8 (169-317)||(21219240-21219388)
chr8 (189-317)||(31399508-31399638)
chr8 (190-292)||(24636660-24636764)
chr8 (189-317)||(25273328-25273457)
chr8 (189-318)||(13060930-13061061)
chr8 (168-243)||(24479874-24479949)
chr8 (204-319)||(10917849-10917966)
chr8 (190-317)||(25000431-25000560)
chr8 (212-317)||(8824855-8824962)
chr8 (212-284)||(19493688-19493762)
chr8 (202-320)||(33412974-33413087)
chr8 (215-317)||(8789873-8789977)
chr8 (161-258)||(3692232-3692330)
chr8 (182-321)||(17003262-17003403)
chr8 (239-317)||(25274654-25274734)
chr8 (175-237)||(25651071-25651133)
chr8 (177-243)||(29473376-29473442)
chr8 (223-288)||(2265407-2265474)
chr8 (219-258)||(15289679-15289718)
chr8 (219-258)||(15470048-15470087)
chr8 (156-228)||(6103846-6103919)
chr8 (177-237)||(6263036-6263096)
[»] chr3 (89 HSPs)
chr3 (160-317)||(27449063-27449223)
chr3 (160-318)||(18104529-18104689)
chr3 (156-318)||(19269863-19270026)
chr3 (168-317)||(11219122-11219273)
chr3 (168-297)||(23217228-23217359)
chr3 (159-317)||(7623531-7623692)
chr3 (160-318)||(30219313-30219474)
chr3 (160-318)||(25882546-25882706)
chr3 (160-314)||(1628190-1628347)
chr3 (160-297)||(26830461-26830602)
chr3 (168-318)||(8110323-8110475)
chr3 (175-317)||(11007683-11007827)
chr3 (168-318)||(11085341-11085493)
chr3 (180-317)||(5260933-5261072)
chr3 (168-317)||(8428155-8428306)
chr3 (168-317)||(16299845-16299996)
chr3 (168-317)||(17762626-17762777)
chr3 (168-317)||(18091547-18091698)
chr3 (168-317)||(19063946-19064097)
chr3 (175-292)||(28389964-28390083)
chr3 (168-317)||(36543733-36543884)
chr3 (189-321)||(13921330-13921464)
chr3 (159-310)||(18539778-18539932)
chr3 (181-317)||(19610335-19610473)
chr3 (168-319)||(4393348-4393501)
chr3 (160-318)||(9652553-9652714)
chr3 (168-287)||(17582331-17582452)
chr3 (161-316)||(27968892-27969049)
chr3 (168-291)||(31433721-31433846)
chr3 (190-317)||(48404866-48404995)
chr3 (174-316)||(11915748-11915892)
chr3 (168-319)||(46942471-46942624)
chr3 (181-318)||(1310958-1311097)
chr3 (161-317)||(21020041-21020200)
chr3 (168-317)||(29215976-29216127)
chr3 (189-319)||(21088757-21088887)
chr3 (160-318)||(26390633-26390794)
chr3 (168-258)||(27212842-27212932)
chr3 (189-319)||(5565727-5565859)
chr3 (180-317)||(19223445-19223584)
chr3 (161-293)||(20615367-20615502)
chr3 (190-317)||(29236050-29236179)
chr3 (168-317)||(31250072-31250223)
chr3 (189-317)||(23773482-23773612)
chr3 (189-317)||(26098818-26098948)
chr3 (190-317)||(21816727-21816856)
chr3 (176-317)||(11837214-11837357)
chr3 (189-318)||(13905037-13905168)
chr3 (189-318)||(15063991-15064122)
chr3 (168-297)||(29704052-29704183)
chr3 (168-317)||(29956356-29956507)
chr3 (168-317)||(30005511-30005662)
chr3 (168-317)||(36564439-36564590)
chr3 (189-317)||(21490034-21490164)
chr3 (168-247)||(49915435-49915514)
chr3 (202-317)||(10941665-10941782)
chr3 (180-287)||(19545506-19545615)
chr3 (161-249)||(8543446-8543534)
chr3 (189-317)||(43329763-43329893)
chr3 (189-317)||(46012728-46012858)
chr3 (204-319)||(8546265-8546382)
chr3 (160-317)||(29451069-29451230)
chr3 (189-317)||(1745488-1745617)
chr3 (175-317)||(15490026-15490169)
chr3 (168-317)||(18380008-18380159)
chr3 (189-317)||(3461310-3461440)
chr3 (189-297)||(28859596-28859706)
chr3 (210-317)||(17269604-17269713)
chr3 (224-317)||(20761950-20762045)
chr3 (189-317)||(5744421-5744551)
chr3 (189-317)||(5781380-5781510)
chr3 (160-318)||(10803695-10803857)
chr3 (174-274)||(20088390-20088492)
chr3 (168-319)||(27182656-27182807)
chr3 (189-297)||(50665656-50665766)
chr3 (210-297)||(37283549-37283638)
chr3 (202-287)||(6718728-6718815)
chr3 (189-317)||(6088228-6088358)
chr3 (184-312)||(26963254-26963384)
chr3 (189-258)||(23233224-23233293)
chr3 (221-318)||(6447245-6447344)
chr3 (189-251)||(27711236-27711298)
chr3 (189-258)||(10772115-10772184)
chr3 (190-239)||(35579605-35579654)
chr3 (190-317)||(47263265-47263394)
chr3 (196-245)||(13615427-13615476)
chr3 (189-287)||(50240751-50240851)
chr3 (188-239)||(10743156-10743207)
chr3 (166-227)||(30132330-30132391)
[»] chr2 (59 HSPs)
chr2 (160-317)||(41637593-41637753)
chr2 (161-317)||(8430273-8430431)
chr2 (158-320)||(13788052-13788217)
chr2 (168-317)||(21293711-21293862)
chr2 (162-316)||(23388379-23388535)
chr2 (168-318)||(28841341-28841493)
chr2 (160-317)||(29749403-29749563)
chr2 (160-317)||(32185807-32185967)
chr2 (168-317)||(30783322-30783473)
chr2 (168-317)||(41736156-41736307)
chr2 (159-322)||(26687685-26687851)
chr2 (168-310)||(32300435-32300579)
chr2 (168-317)||(22140364-22140515)
chr2 (168-297)||(31266338-31266469)
chr2 (159-317)||(40018776-40018937)
chr2 (160-317)||(15636735-15636895)
chr2 (175-297)||(35697447-35697570)
chr2 (168-317)||(20065074-20065225)
chr2 (175-292)||(37724017-37724136)
chr2 (161-317)||(18551253-18551411)
chr2 (185-316)||(28319580-28319713)
chr2 (190-317)||(37552233-37552362)
chr2 (168-317)||(37802379-37802529)
chr2 (168-310)||(1141520-1141664)
chr2 (189-319)||(43408509-43408641)
chr2 (158-257)||(27522984-27523084)
chr2 (160-318)||(32008927-32009089)
chr2 (189-317)||(44476375-44476505)
chr2 (190-317)||(12779606-12779735)
chr2 (168-318)||(27327600-27327752)
chr2 (159-297)||(13613113-13613254)
chr2 (168-319)||(14757119-14757272)
chr2 (160-245)||(29998633-29998719)
chr2 (168-318)||(2556079-2556231)
chr2 (189-317)||(7093573-7093703)
chr2 (175-291)||(28262355-28262473)
chr2 (160-318)||(36373875-36374034)
chr2 (168-258)||(18916461-18916551)
chr2 (192-320)||(36550844-36550973)
chr2 (168-318)||(44722916-44723068)
chr2 (159-291)||(13134646-13134778)
chr2 (190-317)||(23857958-23858086)
chr2 (168-307)||(44366007-44366148)
chr2 (204-318)||(26243320-26243436)
chr2 (224-317)||(27039908-27040003)
chr2 (161-297)||(8763612-8763749)
chr2 (174-317)||(9004308-9004453)
chr2 (189-312)||(38362276-38362401)
chr2 (161-233)||(24117315-24117388)
chr2 (168-228)||(27058407-27058467)
chr2 (169-227)||(16098996-16099054)
chr2 (175-297)||(9590461-9590585)
chr2 (176-258)||(18609506-18609588)
chr2 (169-227)||(22192177-22192235)
chr2 (269-317)||(16098917-16098965)
chr2 (210-287)||(31966555-31966633)
chr2 (168-243)||(6410836-6410912)
chr2 (257-317)||(22192254-22192314)
chr2 (191-227)||(37786373-37786409)
[»] scaffold0603 (1 HSPs)
scaffold0603 (160-317)||(5979-6139)
[»] chr1 (78 HSPs)
chr1 (168-318)||(50845329-50845481)
chr1 (160-318)||(38531169-38531330)
chr1 (175-317)||(12720804-12720948)
chr1 (168-285)||(13522993-13523112)
chr1 (168-297)||(19081716-19081847)
chr1 (168-297)||(19129604-19129735)
chr1 (168-317)||(41752421-41752572)
chr1 (160-317)||(22789593-22789751)
chr1 (168-318)||(6412052-6412204)
chr1 (168-318)||(6459205-6459357)
chr1 (168-318)||(14760855-14761007)
chr1 (168-317)||(9109975-9110126)
chr1 (168-317)||(45839280-45839431)
chr1 (168-320)||(18894897-18895051)
chr1 (168-292)||(41071860-41071986)
chr1 (160-317)||(9985327-9985487)
chr1 (168-317)||(12989840-12989991)
chr1 (161-317)||(20408160-20408319)
chr1 (168-317)||(22603536-22603687)
chr1 (180-317)||(29549418-29549557)
chr1 (168-317)||(52183666-52183817)
chr1 (168-316)||(9259184-9259334)
chr1 (160-318)||(15243064-15243225)
chr1 (159-317)||(13102295-13102455)
chr1 (168-318)||(46865231-46865383)
chr1 (168-289)||(9464091-9464214)
chr1 (161-297)||(16913597-16913735)
chr1 (161-297)||(30928398-30928536)
chr1 (162-318)||(41063179-41063337)
chr1 (158-320)||(7181552-7181717)
chr1 (171-253)||(14486698-14486780)
chr1 (175-317)||(7830026-7830170)
chr1 (168-318)||(23457885-23458037)
chr1 (168-318)||(51973412-51973564)
chr1 (168-297)||(11917774-11917904)
chr1 (168-317)||(12161802-12161953)
chr1 (189-318)||(19865253-19865384)
chr1 (168-297)||(22158790-22158921)
chr1 (189-318)||(28229454-28229585)
chr1 (189-318)||(46790009-46790140)
chr1 (190-318)||(4340417-4340547)
chr1 (190-317)||(9177110-9177239)
chr1 (160-318)||(17200009-17200170)
chr1 (168-318)||(12369950-12370092)
chr1 (167-289)||(17661037-17661161)
chr1 (175-317)||(48522513-48522657)
chr1 (190-319)||(41120735-41120866)
chr1 (190-311)||(46785964-46786087)
chr1 (168-318)||(18787912-18788061)
chr1 (168-319)||(46339443-46339596)
chr1 (168-318)||(13195571-13195723)
chr1 (174-255)||(16258550-16258631)
chr1 (161-258)||(26825221-26825318)
chr1 (211-316)||(25787998-25788105)
chr1 (189-317)||(8940994-8941124)
chr1 (175-310)||(18890556-18890693)
chr1 (168-297)||(20580897-20581029)
chr1 (182-287)||(12174796-12174903)
chr1 (219-318)||(27253854-27253955)
chr1 (168-246)||(29093627-29093705)
chr1 (158-287)||(32046853-32046985)
chr1 (204-317)||(13308820-13308935)
chr1 (189-317)||(39748942-39749072)
chr1 (212-284)||(41359020-41359094)
chr1 (161-317)||(50092298-50092456)
chr1 (168-316)||(17733954-17734105)
chr1 (168-287)||(52621142-52621263)
chr1 (204-297)||(12806856-12806952)
chr1 (168-318)||(20290320-20290471)
chr1 (190-276)||(6091297-6091385)
chr1 (190-244)||(25687355-25687409)
chr1 (168-216)||(13295039-13295087)
chr1 (189-293)||(49881053-49881159)
chr1 (212-246)||(9882110-9882144)
chr1 (188-242)||(30673502-30673556)
chr1 (212-257)||(45918966-45919011)
chr1 (174-258)||(6775881-6775965)
chr1 (168-200)||(27253957-27253989)
[»] scaffold0576 (1 HSPs)
scaffold0576 (160-318)||(9228-9389)
[»] scaffold0219 (1 HSPs)
scaffold0219 (168-319)||(19591-19744)
[»] scaffold0058 (1 HSPs)
scaffold0058 (158-320)||(74538-74703)
[»] scaffold0087 (1 HSPs)
scaffold0087 (160-317)||(37787-37947)
[»] scaffold0007 (4 HSPs)
scaffold0007 (175-317)||(202769-202913)
scaffold0007 (184-319)||(3746-3883)
scaffold0007 (161-246)||(276207-276293)
scaffold0007 (269-317)||(274665-274713)
[»] scaffold0717 (1 HSPs)
scaffold0717 (168-318)||(917-1070)
[»] scaffold0108 (1 HSPs)
scaffold0108 (160-318)||(12632-12792)
[»] scaffold0076 (1 HSPs)
scaffold0076 (180-319)||(26483-26624)
[»] scaffold0047 (1 HSPs)
scaffold0047 (159-317)||(58560-58721)
[»] scaffold0001 (3 HSPs)
scaffold0001 (168-319)||(8108-8261)
scaffold0001 (168-319)||(21840-21993)
scaffold0001 (168-317)||(84291-84442)
[»] scaffold0006 (2 HSPs)
scaffold0006 (168-297)||(121007-121138)
scaffold0006 (189-313)||(84678-84804)
[»] scaffold0599 (1 HSPs)
scaffold0599 (174-316)||(7499-7643)
[»] scaffold0069 (1 HSPs)
scaffold0069 (175-297)||(10153-10277)
[»] scaffold0240 (1 HSPs)
scaffold0240 (190-318)||(14989-15119)
[»] scaffold0062 (1 HSPs)
scaffold0062 (178-318)||(43915-44057)
[»] scaffold0014 (1 HSPs)
scaffold0014 (190-322)||(22221-22355)
[»] scaffold0655 (1 HSPs)
scaffold0655 (168-318)||(3161-3311)
[»] scaffold0023 (1 HSPs)
scaffold0023 (168-319)||(39701-39854)
[»] scaffold0128 (1 HSPs)
scaffold0128 (190-319)||(10661-10792)
[»] scaffold0009 (2 HSPs)
scaffold0009 (168-317)||(219624-219775)
scaffold0009 (212-316)||(182562-182668)
[»] scaffold0019 (1 HSPs)
scaffold0019 (175-289)||(173439-173557)
[»] scaffold0035 (1 HSPs)
scaffold0035 (168-291)||(74743-74869)
[»] scaffold0161 (1 HSPs)
scaffold0161 (168-319)||(6783-6936)
[»] scaffold0024 (1 HSPs)
scaffold0024 (168-250)||(112316-112398)
[»] scaffold0184 (1 HSPs)
scaffold0184 (175-292)||(7451-7570)
[»] scaffold0502 (1 HSPs)
scaffold0502 (160-297)||(10871-11011)
[»] scaffold0011 (1 HSPs)
scaffold0011 (231-317)||(17617-17705)
[»] scaffold0002 (1 HSPs)
scaffold0002 (189-318)||(439972-440103)
[»] scaffold0038 (1 HSPs)
scaffold0038 (161-316)||(22071-22228)
[»] scaffold0284 (1 HSPs)
scaffold0284 (189-287)||(1549-1649)
[»] scaffold0211 (1 HSPs)
scaffold0211 (189-287)||(19168-19268)


Alignment Details
Target: chr7 (Bit Score: 126; Significance: 7e-65; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 15128979 - 15129128
Alignment:
Q  11 atcatcacattacattatattacaatgacacaccaatgcatatgctacatttattgaaattcaaatggatatctaacaacaccaactgataagttggaaa 110  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15128979 atcataacattacattatattacaaagacacaccaatgcatatgctacatttattgaaattcaaatggatatctaacaacaccaactgacaagttggaaa 15129078  T
Q  111 cagcgattgtttattaaaagtagctagtatcatgtagattcatgatataa 160  Q
    |||  |||||||||||||||||||||| ||||||||||||||||||||||    
T  15129079 cagacattgtttattaaaagtagctaggatcatgtagattcatgatataa 15129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 816342 - 816191
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||    
T  816342 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagagatt 816243  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    ||||||||||||| ||||||||||||||||||| |||||||||| |||||||    
T  816242 ttgttttttccgtcactaatttccctccctaaatttgttttttccagtagtg 816191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 22486372 - 22486533
Alignment:
Q  159 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt- 256  Q
    ||||||||||||||  ||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  22486372 aacactactaaaaaaacaaaaattagtgagggaaatttagtgacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 22486471  T
Q  257 -tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
     |||| |||||  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  22486472 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 22486533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 159 - 297
Target Start/End: Original strand, 2457649 - 2457787
Alignment:
Q  159 aacactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    |||||||||||||| |||||||||||||||||||||| | || ||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  2457649 aacactactaaaaaacaaaaattagtgaggaaaattttgtgagggaaaacatgaaatccctctcaaattccgtcactaaattttgcgacaaaagaatttg 2457748  T
Q  259 agaaattttgttttttccgttactaatttccctccctaa 297  Q
     || ||||| | ||||| || ||||||||||||||||||    
T  2457749 tgagattttatattttctgtcactaatttccctccctaa 2457787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 24605826 - 24605977
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| |||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||| ||||    
T  24605826 aaaaatcaaaaattagtgaggaaaatttagtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatt 24605925  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||||||||||||| || |  ||  ||||||||||||||    
T  24605926 tcattttttccgtcactaatttccctcgctgatttttctttttctagtagtg 24605977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 47523801 - 47523650
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||    
T  47523801 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatt 47523702  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||||||||||||| ||||  || |||||||||||||||    
T  47523701 tcattttttccgtcactaatttccctcgctaattttattttttctagtagtg 47523650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 37135436 - 37135283
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||| ||||||  |||||  |||| ||||    
T  37135436 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatggaatttatgaggaatt 37135337  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||||||| ||||||||||||| ||||  ||||||||||||||||||||    
T  37135336 tcattttttccgtcactaatttccctcactaattttgttttttctagtagtgta 37135283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 40847586 - 40847433
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgaga--aatt 265  Q
    ||||| ||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||    
T  40847586 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaatt 40847487  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    || | |||||||| || |||||||||||||||  ||  |||| |||||||||||    
T  40847486 ttatgttttccgtcacaaatttccctccctaattttacttttcctagtagtgta 40847433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 160 - 317
Target Start/End: Complemental strand, 31425671 - 31425511
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||      
T  31425671 acactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccacagaatttg 31425572  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| |||||  |||||||||| ||||||||||||| ||||  ||| |||||||| |||||    
T  31425571 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctaatagtg 31425511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 23232027 - 23232178
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||  |||| ||||    
T  23232027 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctttctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatt 23232126  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  23232127 tcattttttccgtcactaatttccctctctaattttgctttttctagtagtg 23232178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 168 - 297
Target Start/End: Original strand, 31042239 - 31042370
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||  |||||||||    
T  31042239 aaaaagcaaaaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaatt 31042338  T
Q  266 ttgttttttccgttactaatttccctccctaa 297  Q
    || |||||||| | |||||||| |||| ||||    
T  31042339 ttattttttccataactaattttcctctctaa 31042370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 158 - 320
Target Start/End: Complemental strand, 15014567 - 15014402
Alignment:
Q  158 taacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt 256  Q
    |||||||||||||||  ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||||||||||||||| || |||||    
T  15014567 taacactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaaggaatt 15014468  T
Q  257 --tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgtaa 320  Q
      |||| |||||| |||||||||| || |||||||||| ||||  ||  |||||||||||||||||    
T  15014467 tgtgaggaattttattttttccgtcaccaatttccctcgctaattttactttttctagtagtgtaa 15014402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 168 - 287
Target Start/End: Original strand, 22501582 - 22501703
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgagaa--att 265  Q
    ||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||  |||    
T  22501582 aaaaaccaaaaattagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcattaaattttgcggccaaagaatttgtgaaagatt 22501681  T
Q  266 ttgttttttccgttactaattt 287  Q
    || |||||||||| ||||||||    
T  22501682 ttattttttccgtcactaattt 22501703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 1907343 - 1907494
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaga--atttgagaaatt 265  Q
    ||||| |||||||||||||||||||| ||| || ||||||| |||||||||||||||||| |||||||||||||||||||||||||  || ||||  |||    
T  1907343 aaaaaacaaaaattagtgaggaaaatctagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgagggatt 1907442  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || |||||||||| ||||||||||||| ||||  ||| |||| |||||||||    
T  1907443 ttattttttccgtcactaatttccctcgctaattttgcttttcctagtagtg 1907494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 23750875 - 23750736
Alignment:
Q  180 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccg 277  Q
    ||||||||| |||||||| || |||||| || ||||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||  |||||||||    
T  23750875 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaatttcattttttccg 23750776  T
Q  278 ttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    | ||||||||||||| ||||  ||||||||||||||||||    
T  23750775 tcactaatttccctcgctaattttgttttttctagtagtg 23750736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 297
Target Start/End: Original strand, 36636494 - 36636625
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  |||| ||||    
T  36636494 aaaaaacaaaaattagtgaggcaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatt 36636593  T
Q  266 ttgttttttccgttactaatttccctccctaa 297  Q
    || | |||||||| || |||||||||||||||    
T  36636594 ttatgttttccgtcacaaatttccctccctaa 36636625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 160 - 287
Target Start/End: Complemental strand, 10050996 - 10050866
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||      
T  10050996 acactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttg 10050897  T
Q  257 tgagaaattttgttttttccgttactaattt 287  Q
    ||||||||||  |||||||||| ||||||||    
T  10050896 tgagaaatttcattttttccgtcactaattt 10050866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 160 - 317
Target Start/End: Complemental strand, 21917494 - 21917334
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  | ||| ||||||||| | |||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||      
T  21917494 acactactaaaaaaactaaatttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttg 21917395  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| |||||  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  21917394 tgaggaatttcattttttccgtcactaatttccctcactaattttgctttttctagtagtg 21917334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 160 - 317
Target Start/End: Original strand, 27805997 - 27806157
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| | |||||| || ||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||      
T  27805997 acactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaggaatttg 27806096  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| |||||  |||||||||| |||||||| |||| ||||  ||| ||||||||||||||    
T  27806097 tgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 27806157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 161 - 318
Target Start/End: Original strand, 11036488 - 11036647
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tg 258  Q
    ||||||||||||   ||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||   ||||  ||    
T  11036488 cactactaaaaaaacaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtg 11036587  T
Q  259 agaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    || |||||  |||||||||| ||||||||||||  ||||  ||| |||||||||||||||    
T  11036588 aggaatttcattttttccgtcactaatttcccttgctaattttgctttttctagtagtgt 11036647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 28800866 - 28801017
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||  |||| ||||    
T  28800866 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatt 28800965  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  ||||||| || ||||||||||||| ||||  ||| ||||||||||||||    
T  28800966 tcattttttctgtcactaatttccctcgctaattttgctttttctagtagtg 28801017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 161 - 317
Target Start/End: Original strand, 18217810 - 18217968
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tg 258  Q
    ||||||||||||   ||| ||||||||| |||||||| || | ||||||| |||||||||||||||| |||||||||||||||||||||| |||||  ||    
T  18217810 cactactaaaaaattaaatttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtg 18217909  T
Q  259 agaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || |||||  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  18217910 aggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 18217968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 10222780 - 10222630
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-tgagaaattt 266  Q
    |||||| ||||||||||||| ||||||||||||  |||||||| ||||||||||||||||| |||| |||||||||||| |||| | || ||||||||||    
T  10222780 aaaaagtaaaaattagtgagaaaaatttagagaaagaaaacgtaaaatccctctctaattctgtcattaaattttgcgatcaaaaatttatgagaaattt 10222681  T
Q  267 tgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||| || |||||||| |||||||||   |||||||||||||||||    
T  10222680 tactttttctgtcactaattttcctccctaattatgttttttctagtagtg 10222630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 175 - 318
Target Start/End: Complemental strand, 39979768 - 39979623
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    |||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||| |||||||||||||||| |||||  |||| |||||| | ||    
T  39979768 aaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaattttatgtt 39979669  T
Q  273 ttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||||| || |||||||||||||||  ||| |||| ||| ||||||    
T  39979668 ttccgtcacaaatttccctccctaattttgcttttcctaatagtgt 39979623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 168 - 318
Target Start/End: Original strand, 20174008 - 20174160
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||   ||||  |||| ||||    
T  20174008 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatt 20174107  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |  |||||||||| ||||||||||||| ||||  ||| |||| || |||||||    
T  20174108 tcattttttccgtcactaatttccctcgctaattttgcttttcctggtagtgt 20174160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 175 - 317
Target Start/End: Complemental strand, 23577333 - 23577189
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    |||||||||||||| |||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||| |||||  |||| |||||  ||||    
T  23577333 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttt 23577234  T
Q  273 ttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||||| ||||||||| ||| || |  ||  ||||||||||||||    
T  23577233 ttccgtcactaatttctctcgctgatttttctttttctagtagtg 23577189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 7733463 - 7733312
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || | ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||  |||| ||||    
T  7733463 aaaaatcaaaaattagtgagggatatttagtgaggtaaaacatgaaatccctctctaattccgtctctaaattttgcgaccaaggaatttgtgaggaatt 7733364  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||||||||||||| ||||  | | ||||||||||||||    
T  7733363 tcattttttccgtcactaatttccctcgctaatttcgctttttctagtagtg 7733312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 168 - 319
Target Start/End: Original strand, 20429453 - 20429606
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||| ||||||   ||||  |||| ||||    
T  20429453 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgtgaggaatt 20429552  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||||||| ||||||||||||   |||  ||| ||||||||||||||||    
T  20429553 tcattttttccgtcactaatttcccttgttaattttgctttttctagtagtgta 20429606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 318
Target Start/End: Original strand, 1842898 - 1843034
Alignment:
Q  184 tgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttac 281  Q
    ||||| |||||||| || ||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||  |||| |||||  |||||||||| ||    
T  1842898 tgagggaaatttagtgagggaaaacgtaaaatccctccctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 1842997  T
Q  282 taatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||||||||||  |||  ||| |||||||||||||||    
T  1842998 taatttccctcgttaattttgctttttctagtagtgt 1843034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 161 - 318
Target Start/End: Complemental strand, 42926578 - 42926418
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tg 258  Q
    |||||||||||| ||||||||||||||| | |||||| || | ||||| |||||||||||||||||||||||||||||||||||||| ||  ||||  ||    
T  42926578 cactactaaaaaacaaaaattagtgagggatatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgtg 42926479  T
Q  259 agaaattt-tgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    || |||||   |||||||||| |||||||| |||| ||||  || ||||||||||||||||    
T  42926478 aggaatttcatttttttccgtcactaattttcctcgctaattttattttttctagtagtgt 42926418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 168 - 318
Target Start/End: Original strand, 48933124 - 48933276
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | ||   |||||||||||| |||||||||||||||||||||||||||||||||  |||||  |||| ||||    
T  48933124 aaaaaacaaaaattagtgagggaaattttgtgagaaaaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatt 48933223  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    || |||||||||| |||||||| |||| ||||  ||| |||||||| ||||||    
T  48933224 ttattttttccgtcactaattttcctcgctaattttgctttttctaatagtgt 48933276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 318
Target Start/End: Complemental strand, 3904608 - 3904477
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt--gagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| |||||||||||||||||||||||||||||||||||||||  |||||  ||| |||||  |||||||||| |||||||    
T  3904608 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgcgaggaatttcattttttccgtcactaatt 3904509  T
Q  287 tccctccctaaacttgttttttctagtagtgt 318  Q
    |||||| ||||  ||| |||||||||||||||    
T  3904508 tccctcgctaattttgctttttctagtagtgt 3904477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 318
Target Start/End: Original strand, 4514774 - 4514905
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||  |||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||| | |||||||| || ||||    
T  4514774 aaaaattagtgagggaaaatatgaaatccctctctaattccttcactaaattttgcgaccaaagaatttgtgagaaattttatgttttccgtcacaaatt 4514873  T
Q  287 tccctccctaaacttgttttttctagtagtgt 318  Q
    |||||||||||  ||| |||| ||||||||||    
T  4514874 tccctccctaattttgcttttcctagtagtgt 4514905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 20924109 - 20923958
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg--agaaatt 265  Q
    ||||| ||||||||||||| | |||||||| || ||||||| ||||||||||||||||||| |||||||||||||| ||||||  ||||||  ||| |||    
T  20924109 aaaaaacaaaaattagtgatggaaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgtgaccaacaaatttgtaagagatt 20924010  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || |||||||| | |||||||||||||| |||  ||  ||||||||||||||    
T  20924009 ttattttttccatcactaatttccctccataattttactttttctagtagtg 20923958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 160 - 292
Target Start/End: Original strand, 38057611 - 38057746
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||| ||||| |||||||| || |||||||||||||||||||| |||||||||||||||| ||||||||||| |||||      
T  38057611 acactactaaaaaatcaaaaattaatgagggaaatttagcgagggaaaacgtgaaatccctctttaattccgtcactaaactttgcgaccaaggaatttg 38057710  T
Q  257 tgagaaattttgttttttccgttactaatttccctc 292  Q
    |||| |||||| |||||||| | |||||||| ||||    
T  38057711 tgaggaattttattttttccatcactaattttcctc 38057746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 161 - 317
Target Start/End: Complemental strand, 23699983 - 23699825
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tg 258  Q
    |||||||||||| ||||||||||||||  |||||| | || |||||| ||||||||||||| |||||| ||||||||||||||||||||   ||||  ||    
T  23699983 cactactaaaaaacaaaaattagtgagagaaattttgtgagggaaaatgtgaaatccctctttaattctgtcactaaattttgcgaccatgaaatttgtg 23699884  T
Q  259 agaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || |||||  |||||||||| ||||||||||||| ||||  ||  ||||||||||||||    
T  23699883 aggaatttcattttttccgtcactaatttccctcgctaatttttctttttctagtagtg 23699825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 161 - 297
Target Start/End: Original strand, 24140431 - 24140569
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tg 258  Q
    |||||||||||| ||||||||||||||| |||||||| || ||||||| | |||||| |||| |||||||||| |||||||| |||||||||||||  ||    
T  24140431 cactactaaaaaacaaaaattagtgagggaaatttagtgagggaaaacataaaatccttctccaattccgtcattaaattttacgaccaaagaatttgtg 24140530  T
Q  259 agaaattttgttttttccgttactaatttccctccctaa 297  Q
    || |||||| | |||||||| || ||||| |||||||||    
T  24140531 aggaattttatattttccgtcacaaattttcctccctaa 24140569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 9698698 - 9698537
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    |||||||||||||  | ||| ||||||||| |||||||| || ||||||||| |||| ||||||||||||||||||||||||||  |||||| |||||||    
T  9698698 acactactaaaaaaactaaatttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttg 9698599  T
Q  259 aga--aattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
     ||  |||||  || ||||||| ||||||||||||| ||||  ||| |||||||||||||||    
T  9698598 tgatgaatttcattatttccgtcactaatttccctcgctaattttgctttttctagtagtgt 9698537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 168 - 289
Target Start/End: Original strand, 26415412 - 26415535
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||||||||||||||||||| || |||||||| | ||||||| |||||||||| ||||| |||||||||||||| ||| |||| ||||  |||||||||    
T  26415412 aaaaagcaaaaattagtgagggaattttagagaggaaaaacgtaaaatccctctttaatttcgtcactaaattttacgatcaaaaaatttgtgagaaatt 26415511  T
Q  266 ttgttttttccgttactaatttcc 289  Q
    || |||||||| | ||||||||||    
T  26415512 ttattttttccatcactaatttcc 26415535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 3872317 - 3872187
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| ||||| |||||||||||||||||||||||||| |||||| |||||  |||| |||||  |||||||||| |||||||    
T  3872317 aaaaattagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaatttcattttttccgtcactaatt 3872218  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    |||||| ||||  ||| ||||||||||||||    
T  3872217 tccctcgctaattttgctttttctagtagtg 3872187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 160 - 317
Target Start/End: Original strand, 21871552 - 21871707
Alignment:
Q  160 acactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--t 257  Q
    ||||||| ||||| |||||||||||||||||||||||| || |||||| || |||    ||||||||||||||||||||||||||||||||  ||||  |    
T  21871552 acactacaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaatgtaaaa----tctctaattccgtcactaaattttgcgaccaagaaatttgt 21871647  T
Q  258 gagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    ||| |||||  |||||||||  ||| |||| |||| ||||  ||||||||||||||||||    
T  21871648 gaggaatttcattttttccgccactgattttcctcgctaattttgttttttctagtagtg 21871707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 33427669 - 33427829
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    |||||||||||||  ||||||||| | ||| | | |||| || ||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||    
T  33427669 acactactaaaaaaacaaaaattaataagggatacttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttg 33427768  T
Q  259 aga--aattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
     ||  |||||  ||||||  || ||||||||||||| ||||  |||||||||||||||||||    
T  33427769 tgaggaatttcattttttg-gtcactaatttccctcgctaattttgttttttctagtagtgt 33427829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 6849350 - 6849211
Alignment:
Q  180 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccg 277  Q
    |||| |||| |||||||| || | ||||||| ||||| |||||||||||||||||||||||||||||| || |||||  |||| |||||  |||| ||||    
T  6849350 ttagcgagggaaatttagtgaggtaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttctccg 6849251  T
Q  278 ttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    | ||||||||||||| ||||  ||| ||||||||||||||    
T  6849250 tcactaatttccctcgctaattttgctttttctagtagtg 6849211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 193 - 297
Target Start/End: Original strand, 11852021 - 11852127
Alignment:
Q  193 tttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccc 290  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||  ||||| ||||| ||||||| || || |||||| |    
T  11852021 tttagagagggaaaacctgaaatccttctctaattccgtcactaaattttgtgaccaaagaatttgtgagacattttattttttctgtcacaaatttctc 11852120  T
Q  291 tccctaa 297  Q
    |||||||    
T  11852121 tccctaa 11852127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 160 - 317
Target Start/End: Original strand, 15969765 - 15969924
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||  | |||||| || ||||||| |||||| |||||||||||||||||||||||||| |||||||||||||      
T  15969765 acactactaaaaaaacaaaaattagtgag--atatttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttg 15969862  T
Q  257 tgagaaattt-tgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    ||||||||||   |||||||||| |||||| ||||||  |||  ||  ||||||||||||||    
T  15969863 tgagaaatttcatttttttccgtcactaatatccctcattaattttactttttctagtagtg 15969924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 190 - 317
Target Start/End: Original strand, 21623031 - 21623159
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| |||||||||||||||||| ||||||||||||||| |||| |||||  |||| |||||  |||||||||| ||||||||    
T  21623031 aaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgcccaaggaatttgtgaggaatttcattttttccgtcactaattt 21623130  T
Q  288 ccctccctaaacttgttttttctagtagtg 317  Q
    ||||| || |  ||| ||||||||||||||    
T  21623131 ccctcgct-attttgctttttctagtagtg 21623159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 202 - 317
Target Start/End: Original strand, 23539254 - 23539371
Alignment:
Q  202 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaac 299  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||| |  |||||  |||| |||||  |||||||||| ||||||||||||| ||||      
T  23539254 ggaatacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 23539353  T
Q  300 ttgttttttctagtagtg 317  Q
    ||| ||||||||||||||    
T  23539354 ttgctttttctagtagtg 23539371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 158 - 316
Target Start/End: Complemental strand, 27132883 - 27132722
Alignment:
Q  158 taacactacta-aaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt 256  Q
    ||||||||||| |||||||||||||||||||| |||||  |||| | |||||| |||||  ||||||||||| ||||||||||||||| || ||  ||||    
T  27132883 taacactactagaaaagcaaaaattagtgagggaaattgtgagaggaaaaacgcgaaatatctctctaattctgtcactaaattttgcaacaaacaaatt 27132784  T
Q  257 tgaga--aattttgttttttccgttactaatttccctccctaaacttgttttttctagtagt 316  Q
    || ||   ||||| ||||||||||||| |||||||||| ||||  ||  |||||||||||||    
T  27132783 tgtgatggattttattttttccgttaccaatttccctctctaattttactttttctagtagt 27132722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 315
Target Start/End: Original strand, 32267335 - 32267483
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    |||||| ||||||| |||||| ||||||||||| ||||||||  ||||||||||||||||| ||||||||||||||||| |||  ||||  ||||  |||    
T  32267335 aaaaagtaaaaatttgtgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgatcaagaaatttgtgagggatt 32267434  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtag 315  Q
    ||  ||||||||| |||||| |||||||||||  |||  |||||||||||    
T  32267435 tt-atttttccgtcactaatctccctccctaattttgcattttctagtag 32267483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 318
Target Start/End: Complemental strand, 1824330 - 1824199
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||  |||||| ||||||||||||||||||||||||||||||||||  ||||  |||| |||||| | |||||||| || ||||    
T  1824330 aaaaattagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccgtcacaaatt 1824231  T
Q  287 tccctccctaaacttgttttttctagtagtgt 318  Q
    |||||||||||  ||| |||| ||||||||||    
T  1824230 tccctccctaattttgcttttcctagtagtgt 1824199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 202 - 319
Target Start/End: Complemental strand, 2650945 - 2650826
Alignment:
Q  202 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaac 299  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||   ||||  |||| |||||  |||||||||| ||||| ||||||| ||||      
T  2650945 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaaattccctcactaatt 2650846  T
Q  300 ttgttttttctagtagtgta 319  Q
    ||  ||||||||||||||||    
T  2650845 tttctttttctagtagtgta 2650826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 25777272 - 25777173
Alignment:
Q  160 acactactaaaaa-gcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    ||||||||||||| |||||| ||| ||||| ||||||||||| ||||||||||||||| |||||||||| | |||||||||||| ||| |||| ||||||    
T  25777272 acactactaaaaatgcaaaatttaatgagggaaatttagagagggaaaacgtgaaatcactctctaatttcatcactaaattttacgatcaaaaaatttg 25777173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 205 - 313
Target Start/End: Original strand, 27304895 - 27305005
Alignment:
Q  205 aaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgagaa--attttgttttttccgttactaatttccctccctaaacttg 302  Q
    |||||||| |||||||||||||||||||||||||||||||| |||| ||||||| |    ||||| ||||||| || ||||||||||||||||||  |||    
T  27304895 aaacgtgacatccctctctaattccgtcactaaattttgcggccaaggaatttgtgggggattttattttttctgtcactaatttccctccctaattttg 27304994  T
Q  303 ttttttctagt 313  Q
    ||||| |||||    
T  27304995 tttttcctagt 27305005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 189 - 320
Target Start/End: Original strand, 26577274 - 26577407
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||  |||| |||||| | |||||||| || | ||    
T  26577274 aaaaattagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaagtt 26577373  T
Q  287 tccctccctaaacttgttttttctagtagtgtaa 320  Q
    ||||| |||||  ||| |||| | ||||||||||    
T  26577374 tcccttcctaattttgcttttcccagtagtgtaa 26577407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 45664768 - 45664846
Alignment:
Q  180 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    ||||||||| |||| ||| || ||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||    
T  45664768 ttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaaggaatttg 45664846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 11890297 - 11890177
Alignment:
Q  169 aaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattt 266  Q
    |||| ||||| |||||||||||||||||| || ||||||  ||| ||||||| |||| | ||||||||||||||| ||||||||||||  ||||  ||||    
T  11890297 aaaaacaaaagttagtgaggaaaatttagtgagggaaaatatgatatccctcgctaacttcgtcactaaattttgagaccaaagaatttatgagggattt 11890198  T
Q  267 tgttttttccgttactaattt 287  Q
    | |||||||||| ||||||||    
T  11890197 tattttttccgtcactaattt 11890177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 320
Target Start/End: Complemental strand, 14786752 - 14786632
Alignment:
Q  202 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaac 299  Q
    ||||||||| |||| ||| | ||||||||||||||||||||||||||||| ||||  |||| |||||  ||||||| || |||||||| |||| ||||      
T  14786752 ggaaaacgtaaaattcctttttaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttctgtcactaattttcctcactaatt 14786653  T
Q  300 ttgttttttctagtagtgtaa 320  Q
    |||||||||||| ||||||||    
T  14786652 ttgttttttctaatagtgtaa 14786632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 36993808 - 36993959
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||| | |||||||| || | ||||| ||||||| || |||||||||||||||||||||| |||| ||  ||||  |||| ||||    
T  36993808 aaaaaacaaaaattagtgaaggaaatttagtgaggaaaaacatgaaatctctttctaattccgtcactaaattttacgactaagaaatttgtgaggaatt 36993907  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || | |||||| | || |||||||||||||||  ||| |||| |||||||||    
T  36993908 ttatattttccatcacaaatttccctccctaattttgcttttcctagtagtg 36993959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 27130322 - 27130398
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcga 246  Q
    |||||| |||||||| ||||| ||||||||||| |||||| |||||||||  |||||||||||||||||| ||||||||    
T  27130322 aaaaagtaaaaattaatgagggaaatttagagagggaaaatgtgaaatcc--ctctaattccgtcactaacttttgcga 27130398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 168 - 257
Target Start/End: Original strand, 687865 - 687954
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 257  Q
    ||||| ||||||||||||||  |||||||| || |||||| || |||||| |||||||||| ||||||||| |||||||| || ||||||    
T  687865 aaaaaacaaaaattagtgagagaaatttagtgagggaaaatgtaaaatccttctctaattctgtcactaaactttgcgacaaaggaattt 687954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 2093492 - 2093362
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaa--gaatttgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| ||||| ||||||||||||||||||||||||| ||| ||||     |||||| |||||  |||||||||| |||||||    
T  2093492 aaaaattagtgagggaaaacgtcaaatctctctctaattccgtcactaaatttttcgatcaaattttttttgaggaatttcattttttccgtcactaatt 2093393  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    |||||| || |  ||  ||||||||||||||    
T  2093392 tccctcgctgatttttctttttctagtagtg 2093362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 15107469 - 15107551
Alignment:
Q  52 atgctacatttattgaaattcaaatggatatctaacaacaccaactgataagttggaaacagcgatt-gtttattaaaagtag 133  Q
    |||||||| ||||| ||||||| |||||||||||| || |||||||||| |||||||||||  ||||  ||||||||||||||    
T  15107469 atgctacacttatttaaattcagatggatatctaagaaaaccaactgattagttggaaacaaagattcctttattaaaagtag 15107551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 15129126 - 15129172
Alignment:
Q  318 taatgcatggttgatagacatatcaagattaagtggcaatctctaca 364  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||||    
T  15129126 taatgcatggttcatagacatatcaagattaagatgcaatctctaca 15129172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 5235452 - 5235420
Alignment:
Q  207 acgtgaaatccctctctaattccgtcactaaat 239  Q
    |||||||||||||||||||||||||||||||||    
T  5235452 acgtgaaatccctctctaattccgtcactaaat 5235420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 15330349 - 15330274
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaa 250  Q
    |||||||| ||||| | ||||||  | | ||||| ||||||  ||||||||||| |||||||||||||||||||||    
T  15330349 aaaaattaatgagggatatttagtaaggaaaaacttgaaatttctctctaattctgtcactaaattttgcgaccaa 15330274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 26577254 - 26577287
Alignment:
Q  155 atataacactactaaaaagcaaaaattagtgagg 188  Q
    |||||||||||||||||| |||||||||||||||    
T  26577254 atataacactactaaaaaacaaaaattagtgagg 26577287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 1e-47; HSPs: 77)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 168 - 297
Target Start/End: Original strand, 12844991 - 12845122
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||| ||||    
T  12844991 aaaaagaaaaaattagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgagcaatt 12845090  T
Q  266 ttgttttttccgttactaatttccctccctaa 297  Q
    || |||||||||| ||||||||||||||||||    
T  12845091 ttattttttccgtcactaatttccctccctaa 12845122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 158 - 321
Target Start/End: Original strand, 28364888 - 28365054
Alignment:
Q  158 taacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt 256  Q
    |||||||||||||||  ||||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28364888 taacactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatt 28364987  T
Q  257 --tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgtaat 321  Q
      |||| |||||  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||||||    
T  28364988 tgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtaat 28365054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 160 - 317
Target Start/End: Original strand, 9892942 - 9893102
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||      
T  9892942 acactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttg 9893041  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| |||||  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  9893042 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 9893102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 15364618 - 15364457
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||||| || ||||||||| |||||| |||||||||||||||||||||||||||||||| |||||      
T  15364618 acactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttg 15364519  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||| |||||  |||||||||| ||||||||||||| ||||  ||| |||||||||||||||    
T  15364518 tgaggaatttcattttttccgtcactaatttccctcactaattttgctttttctagtagtgt 15364457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 22579509 - 22579348
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||      
T  22579509 acactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttg 22579410  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||| |||||  |||||||||| ||||||||||||| ||||  ||| |||||||| ||||||    
T  22579409 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctaatagtgt 22579348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 161 - 317
Target Start/End: Original strand, 9885224 - 9885382
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tg 258  Q
    |||||||||||||||||||||||||| |||||||||| || ||||||| |||||||||||| |||||  ||||||||||||||| |||||  ||||  ||    
T  9885224 cactactaaaaagcaaaaattagtgacgaaaatttagtgagggaaaacatgaaatccctctttaattttgtcactaaattttgcaaccaacaaatttgtg 9885323  T
Q  259 agaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    ||| ||||| |||||||||| |||||||||||||||| |  ||| ||||||||||||||    
T  9885324 agagattttattttttccgtcactaatttccctccctgattttgctttttctagtagtg 9885382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 155 - 289
Target Start/End: Complemental strand, 12680349 - 12680212
Alignment:
Q  155 atataacactactaaaaa-gcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaga 253  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||| ||||||    
T  12680349 atatagcactactaaaaaagaaaaaattagtgaggaaaatttagagagggaaaacgtgaaattcctctctaattccgtcattaaattttacgatcaaaga 12680250  T
Q  254 att--tgagaaattttgttttttccgttactaatttcc 289  Q
    |||  |||| |||||| |||||||||| ||||||||||    
T  12680249 attcgtgagcaattttattttttccgtcactaatttcc 12680212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 168 - 318
Target Start/End: Original strand, 22083826 - 22083978
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||  |||| ||||    
T  22083826 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcacaaaattttgcgaccaaggaatttgtgaggaatt 22083925  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    || | |||||||| || |||||||||||||||  ||| |||| ||||||||||    
T  22083926 ttatgttttccgtcacaaatttccctccctaattttgcttttcctagtagtgt 22083978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 6598452 - 6598603
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||  |||| ||||    
T  6598452 aaaaaacaaaaattagtgagggatatttagtgagggaaaacttgaaatccctctctaattccgtcactaaattttgcgaccaagtaatttgtgaggaatt 6598551  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  6598552 tcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 6598603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 12951696 - 12951847
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||| |||||||||||||||| |||||  |||||||||    
T  12951696 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaatt 12951795  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || | |||||||| || |||||||||| ||||  ||| |||| |||||||||    
T  12951796 ttatgttttccgtcacaaatttccctctctaattttgcttttcctagtagtg 12951847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 11049911 - 11049750
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||  | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||      
T  11049911 acactactaaaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttg 11049812  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||| |||||  |||||||||| ||||||||||||  ||||  |||||||||||||||||||    
T  11049811 tgaggaatttcattttttccgtcactaatttcccttgctaattttgttttttctagtagtgt 11049750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 159 - 293
Target Start/End: Complemental strand, 12351747 - 12351610
Alignment:
Q  159 aacactactaaaaa-gcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt- 256  Q
    |||||||||||||| | |||||||||||||| ||||||||||| ||||||||||||||  |||||||||||||||| ||||||||||||| || |||||     
T  12351747 aacactactaaaaaagtaaaaattagtgagggaaatttagagagggaaaacgtgaaatttctctctaattccgtcattaaattttgcgactaaggaattt 12351648  T
Q  257 -tgagaaattttgttttttccgttactaatttccctcc 293  Q
     |||| |||||| |||||||||| ||||||||||||||    
T  12351647 gtgaggaattttattttttccgtcactaatttccctcc 12351610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 168 - 287
Target Start/End: Complemental strand, 21691647 - 21691526
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||||||||||||||||||| || |||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||    
T  21691647 aaaaagcaaaaattagtgagggaattttagagaggaaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatttgtgagaaatt 21691548  T
Q  266 ttgttttttccgttactaattt 287  Q
    || |||||| | | ||||||||    
T  21691547 ttatttttttcatcactaattt 21691526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 24661160 - 24661007
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||| |||||||||||||||| |||||||||||||||| |||||  |||| ||||    
T  24661160 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatt 24661061  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||||    
T  24661060 tcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 24661007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 25397997 - 25398138
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    |||||||||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||  ||||    
T  25397997 aaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttt 25398096  T
Q  273 ttccgttactaatttccctccctaaacttgttttttctagta 314  Q
    |||||| ||||||||||||| ||||  ||  |||||||||||    
T  25398097 ttccgtcactaatttccctcgctaatttttctttttctagta 25398138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 1939401 - 1939241
Alignment:
Q  160 acactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--t 257  Q
    ||||||||||||| ||||||||||||||| | ||| || ||  |||||| |||||||||||||||||||||||| ||||||||||||||||| ||||  |    
T  1939401 acactactaaaaaacaaaaattagtgagggatattcagtgagagaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaaaaatttgt 1939302  T
Q  258 gagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    ||| |||||  ||||||| || ||||||||||||| ||||  ||| |||||||||||||||    
T  1939301 gaggaatttcattttttcggtcactaatttccctcgctaattttgctttttctagtagtgt 1939241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 297
Target Start/End: Original strand, 2992603 - 2992734
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  |||| ||||    
T  2992603 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatt 2992702  T
Q  266 ttgttttttccgttactaatttccctccctaa 297  Q
    || |||||||| | ||||||||||||| ||||    
T  2992703 ttattttttccatcactaatttccctcgctaa 2992734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 14886549 - 14886700
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaga--atttgagaaatt 265  Q
    ||||| |||||||||||||||||||||||| || ||||||| | ||||||||||||||||||||||||||||||| ||||||||||  || ||||  |||    
T  14886549 aaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatcaaatccctctctaattccgtcactaaattttacgaccaaagaatatgtgagggatt 14886648  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || ||||||| || |||||||| |||||||||  ||| ||||||| ||||||    
T  14886649 ttattttttctgtcactaattttcctccctaattttgctttttctggtagtg 14886700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 161 - 317
Target Start/End: Original strand, 18048768 - 18048927
Alignment:
Q  161 cactactaaaaagcaaaa-attagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--t 257  Q
    |||||||||||| ||||| |||||||||| |||||||| || | ||||| ||||||||||| |||||||  |||||||||||||||||||| |||||  |    
T  18048768 cactactaaaaaacaaaaaattagtgagggaaatttagtgaggaaaaacatgaaatccctccctaattctctcactaaattttgcgaccaacgaatttgt 18048867  T
Q  258 gagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||||||||| |||||||||| |||||||| |||| ||||  |||||||| |||||||||    
T  18048868 gagaaattttattttttccgtcactaattttcctctctaattttgtttttcctagtagtg 18048927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 21990333 - 21990174
Alignment:
Q  160 acactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttga 259  Q
    |||||||||||||   |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||| ||||||||||||  ||||||     
T  21990333 acactactaaaaaaacaaaattagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaatttttgcgaccaagaaatttgt 21990234  T
Q  260 ga-aattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    ||  | |||  ||||||||| | ||||||||||| ||||  ||| |||||||||||||||    
T  21990233 gaggaatttcatttttccgtcattaatttccctcgctaattttgctttttctagtagtgt 21990174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 160 - 317
Target Start/End: Original strand, 20182124 - 20182284
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||| ||   ||||      
T  20182124 acactactaaaaaatcaaaaattagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttg 20182223  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| |||||  |||||||||| ||||||||||||| ||||  ||  ||||||||||||||    
T  20182224 tgaggaatttcattttttccgtcactaatttccctcgctaattttactttttctagtagtg 20182284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 168 - 314
Target Start/End: Original strand, 21140927 - 21141075
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt--gagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||   |||||  ||| ||||    
T  21140927 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgggaggaatt 21141026  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagta 314  Q
    |  |||||||||| |||||||||||||  |||  ||| |||||||||||    
T  21141027 tcattttttccgtcactaatttccctcgttaattttgctttttctagta 21141075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 160 - 317
Target Start/End: Complemental strand, 22153867 - 22153707
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||| ||   ||||      
T  22153867 acactactaaaaaatcaaaaattagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttg 22153768  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| |||||  |||||||||| ||||||||||||| ||||  ||  ||||||||||||||    
T  22153767 tgaggaatttcattttttccgtcactaatttccctcgctaattttactttttctagtagtg 22153707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 160 - 317
Target Start/End: Original strand, 26224407 - 26224567
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  |||||||||| |||| | |||||| || ||||||| |||||||||||||||||||||||||||||||||| ||||||  ||||      
T  26224407 acactactaaaaaaacaaaaattagcgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaagaaatttg 26224506  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| |||||  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  26224507 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 26224567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 495766 - 495627
Alignment:
Q  180 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccg 277  Q
    ||||||||| |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||  |||| |||||  |||||||||    
T  495766 ttagtgagggaaatttagtgagggaaaacgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 495667  T
Q  278 ttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    | ||||||||||||  ||||  ||| ||||||||||||||    
T  495666 tcactaatttcccttgctaattttgctttttctagtagtg 495627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 159 - 287
Target Start/End: Original strand, 27705400 - 27705531
Alignment:
Q  159 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt- 256  Q
    ||||||||||||||  ||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||  |||||     
T  27705400 aacactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaattt 27705499  T
Q  257 -tgagaaattttgttttttccgttactaattt 287  Q
     |||| |||||  |||||||||| ||||||||    
T  27705500 gtgaggaatttcattttttccgtaactaattt 27705531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 161 - 313
Target Start/End: Complemental strand, 12157534 - 12157380
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg-- 258  Q
    ||||||||||||||||||| ||||||||||||||||||||   ||||  |||||||  ||||||||||||||||||||||||  ||||||||| ||||      
T  12157534 cactactaaaaagcaaaaactagtgaggaaaatttagagagcaaaaatatgaaatcattctctaattccgtcactaaattttatgaccaaagattttgta 12157435  T
Q  259 agaaattttgttttttccgttactaatttccctccctaaacttgttttttctagt 313  Q
    ||  ||||| |||||||||| |||||||||||||| |||  ||| ||||||||||    
T  12157434 agggattttattttttccgtcactaatttccctccttaattttgctttttctagt 12157380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 168 - 316
Target Start/End: Complemental strand, 27796985 - 27796835
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||||||||||||||||||||||||||||||| | ||| |||||  ||||||||     
T  27796985 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaatcaaggaatttatgagaaata 27796886  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagt 316  Q
    |  |||||| ||| ||||||||||||| ||||  ||| |||||||||||||    
T  27796885 tcatttttttcgtcactaatttccctcgctaattttgctttttctagtagt 27796835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 2669287 - 2669448
Alignment:
Q  159 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt- 256  Q
    ||||||||||||||  ||||||||||||||| |||||||| |  | ||||||| |||| |||||||||||||||||||||||||||||||||| |||||     
T  2669287 aacactactaaaaaaacaaaaattagtgagggaaatttagtgtggaaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaattt 2669386  T
Q  257 -tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
     |||| |||||  |||||| ||| |||||||||||||  |||  ||| ||||||||||||||    
T  2669387 gtgaggaatttcatttttttcgtcactaatttccctcgttaattttgctttttctagtagtg 2669448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 18033676 - 18033526
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgaga-aattt 266  Q
    ||||| ||||||||||||||| |||||||  || ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||  | ||    
T  18033676 aaaaaacaaaaattagtgagggaaatttaatgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatt 18033577  T
Q  267 tgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  | ||||||| || |||||||||||||||  ||| |||| |||||||||    
T  18033576 taatgtttccgtcacaaatttccctccctaattttgcttttcctagtagtg 18033526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 33250859 - 33250706
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||  | |||||| || ||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||  |||| ||||    
T  33250859 aaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaattcctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatt 33250760  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||||||| |||||||||||||  |||  |||| |||||||||||||||    
T  33250759 tcattttttccgtcactaatttccctcgttaattttgtcttttctagtagtgta 33250706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 5360431 - 5360547
Alignment:
Q  202 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaac 299  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||  |||| |||||| |||||||||| ||||||||||||| ||||      
T  5360431 ggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaattttattttttccgtcactaatttccctcgctaatt 5360530  T
Q  300 ttgttttttctagtagt 316  Q
    ||| |||||||||||||    
T  5360531 ttgctttttctagtagt 5360547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 23281781 - 23281901
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    ||||||||| |||| |||||| | || |||||||||||||||||||||||||||||||||||||||||||||||| | ||||  |||| |||||| ||||    
T  23281781 aaaaattagggagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttatttt 23281880  T
Q  273 ttccgttactaatttccctcc 293  Q
    |||| | ||||||||||||||    
T  23281881 ttccatcactaatttccctcc 23281901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 12200682 - 12200833
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||  |||||||||||||||||||| |||||||||||| ||||||| |||||  |||| ||||    
T  12200682 aaaaaacaaaaattagtgagggatatttagtgagggaaaatatgaaatccctctctaattccctcactaaattttacgaccaaggaatttgtgaggaatt 12200781  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||||||||||||| ||||  ||| ||||||||| ||||    
T  12200782 tcattttttccgtcactaatttccctcactaattttgctttttctagcagtg 12200833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 168 - 319
Target Start/End: Original strand, 6978267 - 6978418
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| ||  |||||| |||||| |||||||||||||||||||||||||||||||||| |||||  |||| ||||    
T  6978267 aaaaaacaaaaattagtgagggatatttagtga--gaaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatt 6978364  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||||||| ||||||||||||| ||||  ||| |||| ||| |||||||    
T  6978365 tcattttttccgtaactaatttccctcgctaattttgcttttcctaatagtgta 6978418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 175 - 319
Target Start/End: Original strand, 11530220 - 11530366
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    ||||||||||||||||||||||| || ||||||| |||||||| |||||||||||||||||||||||| |||  ||  ||||  ||||||||||| | ||    
T  11530220 aaaaattagtgaggaaaatttagtgagggaaaacatgaaatccatctctaattccgtcactaaattttacgattaagaaatttatgagaaattttatgtt 11530319  T
Q  273 ttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |||||| || |||||||||||||||  ||| |||| ||| |||||||    
T  11530320 ttccgtcacaaatttccctccctaattttgcttttcctaatagtgta 11530366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 168 - 319
Target Start/End: Original strand, 18492357 - 18492510
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||  |||||| |  | ||||||||||||||||| ||||||||||||||||||||||||||||||  |||||  |||||||||    
T  18492357 aaaaaacaaaaattagtgagagaaattttgtaagggaaaacgtgaaatcccactctaattccgtcactaaattttgcgaccatggaatttgtgagaaatt 18492456  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||||||| |||||||| | || ||||  ||| ||||||||| ||||||    
T  18492457 tcattttttccgtcactaatttgcatcgctaattttgctttttctagcagtgta 18492510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 160 - 317
Target Start/End: Complemental strand, 16250961 - 16250802
Alignment:
Q  160 acactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--t 257  Q
    |||||||||||||  |||||||||||||  |||||| | || ||||||||||||||| ||||||||||| ||||||||||||||||| ||   ||||  |    
T  16250961 acactactaaaaaataaaaattagtgagagaaattttgtgagggaaaacgtgaaatctctctctaattctgtcactaaattttgcgatcatgaaatttgt 16250862  T
Q  258 gagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    ||| |||||  |||||||||| |||||||||||||  |||  ||| ||||||||||||||    
T  16250861 gaggaatttcattttttccgtcactaatttccctcgttaattttgctttttctagtagtg 16250802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 30834099 - 30833960
Alignment:
Q  180 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccg 277  Q
    ||||||| | |||||||| || ||| ||||| ||||||||||||||||| |||| ||||||||||||||||| ||||  |||| |||||  |||||||||    
T  30834099 ttagtgaaggaaatttagtgagggagaacgtaaaatccctctctaattctgtcattaaattttgcgaccaaaaaattagtgaggaatttcattttttccg 30834000  T
Q  278 ttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    | ||||||||||||| ||||  ||| ||||||||||||||    
T  30833999 tcactaatttccctcgctaattttgctttttctagtagtg 30833960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 12160997 - 12160845
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||||| |||||| || ||||||| | |||||||||||||||| |||||||||||||| ||| |||| ||||  |||| ||||    
T  12160997 aaaaaacaaaaattagtgaggaatatttagtgagggaaaacataaaatccctctctaatttcgtcactaaatttt-cgatcaaaaaatttgtgaggaatt 12160899  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||| ||| ||||||||||||| ||||  ||  ||||||||||||||||    
T  12160898 tcattttttacgtcactaatttccctcgctaattttactttttctagtagtgta 12160845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 190 - 317
Target Start/End: Original strand, 15448395 - 15448524
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| |||||||||||||||||||||| ||||||||||||  || |||||  |||| |||||  |||||||||| ||||||||    
T  15448395 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcactaattt 15448494  T
Q  288 ccctccctaaacttgttttttctagtagtg 317  Q
    ||||| ||||  ||| ||||||||||||||    
T  15448495 ccctcgctaattttgctttttctagtagtg 15448524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 14036601 - 14036686
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcga 246  Q
    |||||||||||| ||||||||||||||| |||||| | || ||||||||||||||||||||||||||| |||| ||||||||||||    
T  14036601 cactactaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcattaaattttgcga 14036686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 11077658 - 11077785
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||  |||| |||||| | |||||||| || ||||    
T  11077658 aaaaattagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatt 11077757  T
Q  287 tccctccctaaacttgttttttctagta 314  Q
    |||||||||||  ||  |||||||||||    
T  11077758 tccctccctaatttttctttttctagta 11077785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 317
Target Start/End: Original strand, 12499225 - 12499356
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||  |||| |||||  |||||||||| |||| ||    
T  12499225 aaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactt 12499324  T
Q  287 tccctccctaaacttg-ttttttctagtagtg 317  Q
    |||||| ||||  ||| |||||||||||||||    
T  12499325 tccctcgctaattttgtttttttctagtagtg 12499356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 317
Target Start/End: Original strand, 12506554 - 12506685
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||  |||| |||||  |||||||||| |||| ||    
T  12506554 aaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactt 12506653  T
Q  287 tccctccctaaacttg-ttttttctagtagtg 317  Q
    |||||| ||||  ||| |||||||||||||||    
T  12506654 tccctcgctaattttgtttttttctagtagtg 12506685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 12509676 - 12509545
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||  |||| |||||  |||||||||| |||| ||    
T  12509676 aaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactt 12509577  T
Q  287 tccctccctaaacttg-ttttttctagtagtg 317  Q
    |||||| ||||  ||| |||||||||||||||    
T  12509576 tccctcgctaattttgtttttttctagtagtg 12509545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 17919524 - 17919675
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||| ||  || |||||  || ||||||||||||||||||||||||||||||||||||||| |||||  |||  ||||    
T  17919524 aaaaaacaaaaattagtgagggaaatgtaatgagggaaactgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgatgaatt 17919623  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| | | ||||| ||| ||||  ||||||||||||||||||    
T  17919624 tcattttttccgtcattgatttctctcgctaattttgttttttctagtagtg 17919675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 26939575 - 26939726
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||  | |||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||  |||| ||||    
T  26939575 aaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatt 26939674  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  ||||||  || |||||||||||||  |||  ||  ||||||||||||||    
T  26939675 tcattttttttgtcactaatttccctcagtaattttactttttctagtagtg 26939726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 189 - 311
Target Start/End: Complemental strand, 5192319 - 5192195
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||  |||| |||||  |||||||| | |||||||    
T  5192319 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccttcactaatt 5192220  T
Q  287 tccctccctaaacttgttttttcta 311  Q
    | |||| ||||  ||| ||||||||    
T  5192219 ttcctcgctaattttgctttttcta 5192195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 168 - 276
Target Start/End: Original strand, 5270380 - 5270491
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaa---tttgagaaat 264  Q
    |||||| |||||||||||||| || |||||||| |||||| ||||||| |||||||||||||||||||||||||| ||| |||| ||   | ||||||||    
T  5270380 aaaaagtaaaaattagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcactaaattttacgatcaaaaaaatttgtgagaaat 5270479  T
Q  265 tttgttttttcc 276  Q
    ||| ||||||||    
T  5270480 tttattttttcc 5270491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 343707 - 343624
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    |||||||||||||| |||||||  || ||||||||| ||||||||||||||||| ||||||||| |||||||||||| ||||||    
T  343707 aaaaattagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattctgtcactaaaatttgcgaccaaaaaatttg 343624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 6605626 - 6605496
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||| ||||||| ||||||||||||||||||| |||||||||| ||  ||||  |||| |||||  |||||||||| |||||||    
T  6605626 aaaaattagtgagggaaaacatgaaatctctctctaattccgtcactatattttgcgactaagaaatttgtgaggaatttcattttttccgtcactaatt 6605527  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    |||||| ||||  ||| ||||||||||||||    
T  6605526 tccctcgctaattttgctttttctagtagtg 6605496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 168 - 307
Target Start/End: Complemental strand, 22055763 - 22055622
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| || ||||| || | ||||| |||||||||||||||||||| ||| | ||||||| |||||| |||||  |||| ||||    
T  22055763 aaaaaccaaaaattagtgagggaagtttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaatt 22055664  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttt 307  Q
    || ||||||| || | ||||||||||| ||||  ||||||||    
T  22055663 ttattttttctgtcattaatttccctctctaattttgttttt 22055622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 297
Target Start/End: Complemental strand, 12205321 - 12205205
Alignment:
Q  183 gtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgtta 280  Q
    |||||||||||||  ||| ||||||||||||||||||| ||||||||||||||||||||| |||   |||||||  ||||||||||  | |||||||| |    
T  12205321 gtgaggaaaattttaagagggaaaacgtgaaatccctcactaattccgtcactaaattttacgatttaagaatttgtgagaaatttaatgttttccgtca 12205222  T
Q  281 ctaatttccctccctaa 297  Q
    |||||||| || |||||    
T  12205221 ctaatttctcttcctaa 12205205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 319
Target Start/End: Complemental strand, 15961537 - 15961405
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg--agaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| |||| ||||||||||||||| |||||||||||||| |||  ||||||  || |||||  |||||||||| |||||||    
T  15961537 aaaaattagtgagggaaaacgtaaaattcctctctaattccgttactaaattttgcgatcaagaaatttgtaaggaatttcattttttccgtcactaatt 15961438  T
Q  287 tccctccctaaacttgttttttctagtagtgta 319  Q
    ||||||  |||  ||| ||||||||||||||||    
T  15961437 tccctcgttaattttgctttttctagtagtgta 15961405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 288
Target Start/End: Original strand, 9060079 - 9060200
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||| | |||||||| || ||||| | ||||||  ||||||||||| |||||||||||||||||||||| ||||  ||||  |||    
T  9060079 aaaaaacaaaaattagtgaaggaaatttagcgagggaaa-catgaaatttctctctaattctgtcactaaattttgcgaccaaaaaatttgtgagggatt 9060177  T
Q  266 ttgttttttccgttactaatttc 288  Q
    || |||||||||| |||||||||    
T  9060178 ttattttttccgtcactaatttc 9060200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 297
Target Start/End: Original strand, 14872128 - 14872238
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||| ||||||||||||||||||||||||||||||||||  ||||| |||||  |||| |||||| | |||||||| || ||||    
T  14872128 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattttggaaccaaggaatttgtgaggaattttatgttttccgtcacaaatt 14872227  T
Q  287 tccctccctaa 297  Q
    |||||| ||||    
T  14872228 tccctctctaa 14872238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 297
Target Start/End: Original strand, 16118135 - 16118265
Alignment:
Q  169 aaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg--agaaattt 266  Q
    |||| |||||||||||||| ||||||||  || ||| ||| ||||||| |||||||||| ||||| |||||||||||| | | |||||||  ||| ||||    
T  16118135 aaaaacaaaaattagtgagaaaaatttaatgagggagaacatgaaatctctctctaatttcgtcattaaattttgcgatcgaggaatttgtaagagattt 16118234  T
Q  267 tgttttttccgttactaatttccctccctaa 297  Q
    |  ||||||||| |||||||||| |||||||    
T  16118235 tagtttttccgtcactaatttccgtccctaa 16118265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 158 - 287
Target Start/End: Original strand, 2396180 - 2396313
Alignment:
Q  158 taacactactaaaa-agcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt 256  Q
    |||||||||||||| | ||||||||||| |||||||||||||||   ||||||||||||  ||||||  |||||||| |||||||| | |||||||||||    
T  2396180 taacactactaaaataacaaaaattagtaaggaaaatttagagagcaaaaacgtgaaatttctctctgtttccgtcattaaattttacaaccaaagaatt 2396279  T
Q  257 --tga-gaaattttgttttttccgttactaattt 287  Q
      ||| ||| |||| |||||||||| ||||||||    
T  2396280 tatgaggaatttttattttttccgtcactaattt 2396313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 319
Target Start/End: Original strand, 28668132 - 28668241
Alignment:
Q  212 aaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttc 309  Q
    |||||||| ||||||||||||| |||||||||||| ||| |||||  |||| |||||| |||||||||| ||| ||||||||| ||||  ||  ||||||    
T  28668132 aaatccctttctaattccgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtcactgatttccctcgctaattttactttttc 28668231  T
Q  310 tagtagtgta 319  Q
    ||||||||||    
T  28668232 tagtagtgta 28668241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 13145011 - 13145080
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    |||| |||| || ||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||    
T  13145011 aaaaattagtgagggaaaacgtgaaatctctctttaattccgtcactaaattttgcgaccaaggaatttg 13145080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 311
Target Start/End: Complemental strand, 20692941 - 20692817
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaa--tttgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| |||||||||||||||| ||||||||||||||||||||||| ||  | | |  |||||| |||||||||| |||||||    
T  20692941 aaaaattagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaaaaacttataaagaattttattttttccgtcactaatt 20692842  T
Q  287 tccctccctaaacttgttttttcta 311  Q
    | ||||  |||  ||||||||||||    
T  20692841 ttcctcgttaattttgttttttcta 20692817  T

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Target: chr6; HSP #63
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 297
Target Start/End: Original strand, 15509184 - 15509275
Alignment:
Q  208 cgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaa 297  Q
    ||||||||||||||||||||||||||||||||||| ||||||   ||||  |||| |||||  |||||||||| ||||||||||||| ||||    
T  15509184 cgtgaaatccctctctaattccgtcactaaattttccgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 15509275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 11431793 - 11431715
Alignment:
Q  166 ctaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgc 244  Q
    |||||||  |||| ||||||||| ||||||||||| | |||||| || |||||||| ||||||||||||||||||||||    
T  11431793 ctaaaaaataaaatttagtgagggaaatttagagaggaaaaacgcgatatccctctttaattccgtcactaaattttgc 11431715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 317
Target Start/End: Original strand, 14772691 - 14772800
Alignment:
Q  210 tgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaacttgttttt 307  Q
    ||||||| ||||||||||||||||||||||||| ||||||| |||||  |||| |||||| | |||| ||| || |||||| ||||||||  ||| ||||    
T  14772691 tgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaattttatgtttttcgtcacaaatttctctccctaattttgctttt 14772790  T
Q  308 tctagtagtg 317  Q
    |||| |||||    
T  14772791 tctaatagtg 14772800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 250
Target Start/End: Complemental strand, 19175927 - 19175846
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaa 250  Q
    ||||| |||||||||| |||| ||||| || || |||||| || |||| ||||||||||||||||||||||||||||||||||    
T  19175927 aaaaaacaaaaattagagagggaaatt-agtgagggaaaatgtaaaattcctctctaattccgtcactaaattttgcgaccaa 19175846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 3619692 - 3619619
Alignment:
Q  170 aaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttg 243  Q
    |||| ||||||||| ||| |||||||||||||| ||||||| ||||||||||||||||   |||||||||||||    
T  3619692 aaagaaaaaattagcgagaaaaatttagagatgaaaaacgttaaatccctctctaattttatcactaaattttg 3619619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 202 - 320
Target Start/End: Original strand, 6065459 - 6065579
Alignment:
Q  202 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaac 299  Q
    |||||||  ||||| |||||||||||  |||| |||||||||||| |||||||||  ||||| ||||| |||||||||| | |||||| |||||||||      
T  6065459 ggaaaacaagaaattcctctctaattttgtcattaaattttgcgatcaaagaatttgtgagagattttattttttccgtcattaattttcctccctaatt 6065558  T
Q  300 ttgttttttctagtagtgtaa 320  Q
    ||| |||| ||| ||||||||    
T  6065559 ttgcttttcctaatagtgtaa 6065579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 33547555 - 33547624
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    |||| |||| || ||||||| |||||||||| |||||||  |||||||||||||||||||||||||||||    
T  33547555 aaaaattagtgagggaaaacatgaaatccctatctaattttgtcactaaattttgcgaccaaagaatttg 33547624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 11350191 - 11350315
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgagaaattttgttttttccgttactaatttc 288  Q
    |||| |||| || ||||||| | ||||| ||||||||||| |||||||||||||||||  || ||||||| | | |||| | |||||||| || ||||||    
T  11350191 aaaaattagtgagggaaaacataaaatcgctctctaattctgtcactaaattttgcgattaaggaatttgtg-atttttttgttttccgtcacaaatttc 11350289  T
Q  289 cctccctaaacttgttttttctagta 314  Q
    |||||||||  ||| |||| ||||||    
T  11350290 cctccctaattttgcttttcctagta 11350315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 13668137 - 13668071
Alignment:
Q  176 aaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaatttt 242  Q
    |||||| |||| | ||||||||||| |||||||||||||| || |||||||||| ||| ||||||||    
T  13668137 aaaattggtgaaggaaatttagagagggaaaacgtgaaattcccctctaattccatcattaaatttt 13668071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 316
Target Start/End: Original strand, 28221573 - 28221730
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt--g 258  Q
    ||||||||||||   |||||| | |||| ||||||| | |||||| || |||||||  ||||||| |   ||| |||| ||||||| |||| |||||  |    
T  28221573 cactactaaaaaaacaaaattggcgagggaaatttacaaatggaacacatgaaatcattctctaactttctcattaaagtttgcgatcaaaaaatttatg 28221672  T
Q  259 agaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagt 316  Q
    ||||||||| |||||||| | |||||||||||||||| |  |||||||| ||| ||||    
T  28221673 agaaattttattttttccctcactaatttccctccctgattttgtttttcctaatagt 28221730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 320
Target Start/End: Complemental strand, 8844252 - 8844165
Alignment:
Q  236 aaattttgcgaccaaagaatttg---agaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgtaa 320  Q
    |||||||||||||||  ||||||   ||| ||||| |||||||||| |||||||||||||||| |  ||  |||||||||||||||||    
T  8844252 aaattttgcgaccaataaatttgttgagagattttattttttccgtcactaatttccctccctgatttttctttttctagtagtgtaa 8844165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 10458802 - 10458902
Alignment:
Q  218 ctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtag 315  Q
    |||| ||||||| |||||||||||||| ||||| |||||  |||| || ||  |||||||||| ||||||||||||| ||||  ||  ||||||||||||    
T  10458802 ctctttaattccatcactaaattttgcaaccaaggaatttgtgaggaaattcattttttccgtcactaatttccctcactaattttactttttctagtag 10458901  T
Q  316 t 316  Q
    |    
T  10458902 t 10458902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 30745842 - 30745780
Alignment:
Q  194 ttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    ||||||| |||||||||||||||  ||||||| |||||||||||||||| ||| |||| ||||||    
T  30745842 ttagagagggaaaacgtgaaatc--tctctaagtccgtcactaaattttacgatcaaaaaatttg 30745780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 258
Target Start/End: Complemental strand, 3673233 - 3673194
Alignment:
Q  219 tctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  3673233 tctctaattccgtcactaaattttacgaccaaaaaatttg 3673194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 318
Target Start/End: Complemental strand, 10929614 - 10929495
Alignment:
Q  202 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgaga---aattttgttttttccgttactaatttccctccctaaa 298  Q
    ||||||| ||||||| |||| | ||||||||| ||||||||||||| || ||||||| ||    ||||  |||||||||| |||||||| | |||||||     
T  10929614 ggaaaacatgaaatctctctttgattccgtcattaaattttgcgacaaaggaatttgtgaggggatttaattttttccgtcactaattttcttccctaat 10929515  T
Q  299 cttgttttttctagtagtgt 318  Q
     ||| |||| | ||||||||    
T  10929514 tttgattttccaagtagtgt 10929495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 9e-46; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 168 - 318
Target Start/End: Complemental strand, 22128463 - 22128311
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||  ||||| |||    
T  22128463 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagagatt 22128364  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    || |||||||||| |||||||||||||||| |  |||||||||||||||||||    
T  22128363 ttattttttccgtcactaatttccctccctgattttgttttttctagtagtgt 22128311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 19839155 - 19839316
Alignment:
Q  159 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt- 256  Q
    ||||||||||||||  |||||||||| ||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||     
T  19839155 aacactactaaaaaaacaaaaattagcgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 19839254  T
Q  257 -tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
     ||||||||||  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  19839255 gtgagaaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 19839316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 1638433 - 1638584
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaga--atttgagaaatt 265  Q
    ||||| |||||||||||||||||||||||| || ||||||| |||||| |||| ||||||||||||||||||||||||||||||||  || ||||  |||    
T  1638433 aaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatgaaattcctccctaattccgtcactaaattttgcgaccaaagaatatgtgagggatt 1638532  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || |||||||||| ||||||||||||||||||  |||||||| |||||||||    
T  1638533 ttattttttccgtcactaatttccctccctaattttgtttttcctagtagtg 1638584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 160 - 319
Target Start/End: Complemental strand, 46286389 - 46286227
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||   ||||      
T  46286389 acactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttg 46286290  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |||| |||||| |||||||||| |||||||||| || ||||  ||| ||||||||||||||||    
T  46286289 tgaggaattttattttttccgtcactaatttccgtcactaattttgctttttctagtagtgta 46286227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 55309373 - 55309211
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||      
T  55309373 acactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttg 55309274  T
Q  257 tgagaaattt-tgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||| |||||   |||||||||| ||||||||||||| ||||  ||| |||||||||||||||    
T  55309273 tgaggaatttcatttttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 55309211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 159 - 317
Target Start/End: Complemental strand, 27040186 - 27040025
Alignment:
Q  159 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt- 256  Q
    ||||||||||||||  |||| |||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||   ||||     
T  27040186 aacactactaaaaaaacaaatattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaattt 27040087  T
Q  257 -tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
     |||| |||||| |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  27040086 gtgaggaattttcttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 27040025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 33914035 - 33914196
Alignment:
Q  159 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt- 256  Q
    ||||||||||||||  ||||||||||||||| |||||||| || | ||||| |||||||||||||||||||||||||||||||||||||||||| ||||     
T  33914035 aacactactaaaaaaacaaaaattagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaattt 33914134  T
Q  257 -tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
     |||| |||||| | |||||||| || |||||||||||||||  ||| |||| |||||||||    
T  33914135 atgaggaattttatgttttccgtcacaaatttccctccctaattttgcttttcctagtagtg 33914196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 297
Target Start/End: Original strand, 38223496 - 38223627
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg--agaaatt 265  Q
    |||||||||||||| |||||| ||||||||||| ||||||||  ||||||||||||||||| ||||||||||||||||||||| |||||||  || ||||    
T  38223496 aaaaagcaaaaatttgtgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtaaggaatt 38223595  T
Q  266 ttgttttttccgttactaatttccctccctaa 297  Q
    || |||||||||| |||||| |||||||||||    
T  38223596 ttattttttccgtcactaatctccctccctaa 38223627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 168 - 318
Target Start/End: Complemental strand, 2275829 - 2275676
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||  |||| ||||    
T  2275829 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatt 2275730  T
Q  266 ttgttttttccgttactaatttccctccctaa-acttgttttttctagtagtgt 318  Q
    |  |||||||||| ||||||||||||| ||||   |||||||||||||||||||    
T  2275729 tcattttttccgtcactaatttccctcgctaatttttgttttttctagtagtgt 2275676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 8878859 - 8879020
Alignment:
Q  159 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt- 256  Q
    ||||||||||||||  ||||||||||||| | |||||||| || ||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||     
T  8878859 aacactactaaaaaaacaaaaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgaccaacgaattt 8878958  T
Q  257 -tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
     ||||| ||||| |||||||||| ||||||||||||| || |  ||| ||||||| ||||||    
T  8878959 ctgagagattttattttttccgtcactaatttccctctctgattttgctttttcttgtagtg 8879020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 30269139 - 30268986
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt--gagaaatt 265  Q
    ||||| ||||||||||||||| |||||||| || |||||| || ||||| |||||||||||||||||||||||||||||||||| |||||  ||| ||||    
T  30269139 aaaaaacaaaaattagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatt 30269040  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||||||| ||| ||||||||| ||||  ||| ||||||||||||||||    
T  30269039 tcattttttccgtcactgatttccctcgctaattttgctttttctagtagtgta 30268986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 168 - 319
Target Start/End: Original strand, 30283050 - 30283203
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt--gagaaatt 265  Q
    ||||| ||||||||||||||| |||||||| || |||||| || ||||| |||||||||||||||||||||||||||||||||| |||||  ||| ||||    
T  30283050 aaaaaacaaaaattagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatt 30283149  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||||||| ||| ||||||||| ||||  ||| ||||||||||||||||    
T  30283150 tcattttttccgtcactgatttccctcgctaattttgctttttctagtagtgta 30283203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 180 - 319
Target Start/End: Complemental strand, 32175876 - 32175735
Alignment:
Q  180 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccg 277  Q
    ||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||  ||||  |||| |||||| |||||||||    
T  32175876 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccg 32175777  T
Q  278 ttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    | |||||||||||||  |||  ||| ||||||||||||||||    
T  32175776 tcactaatttccctcgttaattttgctttttctagtagtgta 32175735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 161 - 310
Target Start/End: Original strand, 39234921 - 39235071
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tg 258  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||  || ||||||||||||||||||| ||||  ||    
T  39234921 cactactaaaaagcaaaaattagtgagggaaatttagagaaggaaaacgtgaaat--ctctctaattttgttactaaattttgcgaccaaaaaatttgtg 39235018  T
Q  259 agaaattttgt-tttttccgttactaatttccctccctaaacttgttttttct 310  Q
    ||||||||| | |||||||||||| | |||||||||||||  ||| |||||||    
T  39235019 agaaattttatgtttttccgttacaagtttccctccctaattttggtttttct 39235071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 160 - 317
Target Start/End: Original strand, 5399586 - 5399746
Alignment:
Q  160 acactactaa-aaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||| ||| ||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||      
T  5399586 acactactaacaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttg 5399685  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| |||||| | |||||||| || ||||| |||||||||  ||| |||| |||||||||    
T  5399686 tgaggaattttatgttttccgtcacaaattttcctccctaagtttgcttttcctagtagtg 5399746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 160 - 317
Target Start/End: Original strand, 5473826 - 5473986
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  | ||| |||||||||||||||||| || ||||||||| |||||||||| |||||||||||||||||||||||||||| |||||      
T  5473826 acactactaaaaaaactaaatttagtgaggaaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaattgg 5473925  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| |||||  ||||| |||| ||||||||||||| ||||  ||| ||||||||||||||    
T  5473926 tgaggaatttcatttttcccgtcactaatttccctcgctaattttgctttttctagtagtg 5473986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 161 - 319
Target Start/End: Original strand, 18051818 - 18051978
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tg 258  Q
    ||||| |||||| ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||||||||||||||||    ||||  ||    
T  18051818 cactattaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtg 18051917  T
Q  259 agaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    ||||||||  |||||||||| ||||||||||||| ||||  ||| ||||||| | ||||||    
T  18051918 agaaatttcattttttccgtcactaatttccctcactaattttgctttttctggcagtgta 18051978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 167 - 317
Target Start/End: Original strand, 22168253 - 22168405
Alignment:
Q  167 taaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaat 264  Q
    |||||| ||||||||||||||| | |||||| || ||||||| |||||| |||||||||||||| ||||||||||||||||||| |||||  |||| |||    
T  22168253 taaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaattcctctctaattccggcactaaattttgcgaccaaggaatttatgaggaat 22168352  T
Q  265 tttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    ||  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  22168353 ttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 22168405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 160 - 297
Target Start/End: Original strand, 25147698 - 25147838
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||      
T  25147698 acactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 25147797  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaa 297  Q
    |||| |||||| | |||||||| |  |||||||||| ||||    
T  25147798 tgaggaattttatgttttccgtcataaatttccctctctaa 25147838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 175 - 317
Target Start/End: Original strand, 36689670 - 36689814
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    ||||||||| |||| |||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||  ||||    
T  36689670 aaaaattagcgagggaaatttagtgtgggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgagaaatttcatttt 36689769  T
Q  273 ttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| | |||||||||||||  |||  ||||||||||| ||||||    
T  36689770 ttccatcactaatttccctcgttaattttgttttttcttgtagtg 36689814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 9913244 - 9913395
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaa-agaatt-tgagaaatt 265  Q
    |||||||||||||| |||||| || |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||  |||    
T  9913244 aaaaagcaaaaatttgtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatt 9913343  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| |||||||| |||||||||  ||  ||||||||||||||    
T  9913344 taattttttccgtcactaattttcctccctaattttaatttttctagtagtg 9913395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 160 - 316
Target Start/End: Complemental strand, 24682485 - 24682328
Alignment:
Q  160 acactactaaaaa-gcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    ||||||||||||| |||||||||||||||| ||||| | ||  ||||||||||||||||||||||||||||  ||||||||||||||||||  |||||      
T  24682485 acactactaaaaaagcaaaaattagtgagggaaattgaaag--ggaaaacgtgaaatccctctctaattccaccactaaattttgcgaccatggaatttg 24682388  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagt 316  Q
    |||| |||||| |||||||||| | ||||||||||||||||  ||  |||||||||||||    
T  24682387 tgaggaattttattttttccgtcattaatttccctccctaatttttctttttctagtagt 24682328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 159 - 312
Target Start/End: Complemental strand, 37378784 - 37378628
Alignment:
Q  159 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt- 256  Q
    ||||||||||||||  ||||||||||||||| |||||| | || ||||||| ||||||||||||||||||||||||||||||||||||||||  |||||     
T  37378784 aacactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaattt 37378685  T
Q  257 -tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctag 312  Q
     |||| |||||  |||||||||| | |||||| |||| ||||  ||| |||||||||    
T  37378684 gtgaggaatttcattttttccgtcaataattttcctcgctaattttgctttttctag 37378628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 318
Target Start/End: Original strand, 38619854 - 38619985
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||  |||| |||||  |||||||||| | |||||    
T  38619854 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttatgaggaatttcattttttccgtcattaatt 38619953  T
Q  287 tccctccctaaacttgttttttctagtagtgt 318  Q
    |||||| ||||  ||| |||||||||||||||    
T  38619954 tccctcgctaattttgctttttctagtagtgt 38619985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 190 - 318
Target Start/End: Complemental strand, 4586887 - 4586757
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| ||||||||||||||||||||||||||||||| ||| ||| |||||  |||| |||||  |||||||||| ||||||||    
T  4586887 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgatcaaggaatttgtgaggaatttcattttttccgtcactaattt 4586788  T
Q  288 ccctccctaaacttgttttttctagtagtgt 318  Q
    ||||| ||||  ||| |||||||||||||||    
T  4586787 ccctcgctaattttgctttttctagtagtgt 4586757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 189 - 317
Target Start/End: Original strand, 38645757 - 38645887
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||  |||| |||||  |||||||||| | |||||    
T  38645757 aaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcaataatt 38645856  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    |||||| ||||  ||| ||||||||||||||    
T  38645857 tccctcgctaattttgctttttctagtagtg 38645887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 13565075 - 13564914
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    |||||||||||||  | ||| ||||||||| |||||||| || ||||||||| |||| ||||||||||||||||||||||||||  |||||| |||||||    
T  13565075 acactactaaaaaaactaaatttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttg 13564976  T
Q  259 aga--aattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
     ||  |||||  || ||||||| ||||||||||||| ||||  ||| |||||||||||||||    
T  13564975 tgatgaatttcattatttccgtcactaatttccctcgctaattttgctttttctagtagtgt 13564914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 19680584 - 19680423
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||| ||||| |||||| | || ||||||||| ||||||||||||||||||||||||||||||||||||||   ||||      
T  19680584 acactactaaaaaaacaaaaattaatgagggaaattttgtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttg 19680485  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||| |||||  |||||||||| ||||| ||||||| ||||  ||  |||||||||||||||    
T  19680484 tgaggaatttcattttttccgtcactaaattccctcactaatttttctttttctagtagtgt 19680423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 22156752 - 22156662
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22156752 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttg 22156662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 37761993 - 37761912
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 249  Q
    ||||| |||||| || |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37761993 aaaaatcaaaaaataatgaggaaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 37761912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 190 - 319
Target Start/End: Complemental strand, 13028945 - 13028814
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||  ||||  |||| ||||   |||||||||| ||||||||    
T  13028945 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattgcattttttccgtcactaattt 13028846  T
Q  288 ccctccctaaacttgttttttctagtagtgta 319  Q
     |||| ||||  ||| ||||||||||||||||    
T  13028845 tcctcgctaagtttgctttttctagtagtgta 13028814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 18714924 - 18715039
Alignment:
Q  204 aaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaactt 301  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||| |||||  |||| |||||| |||||||||| ||| ||||||||| ||||  ||    
T  18714924 aaaacgtaaaatccctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaattttattttttccgtcacttatttccctcgctaatatt 18715023  T
Q  302 gttttttctagtagtg 317  Q
    | ||||||||||||||    
T  18715024 gctttttctagtagtg 18715039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 9670609 - 9670479
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| |||| |||||||||||||||||||||||||||||||||| |||||  |||| |||||  |||||||||| |||||||    
T  9670609 aaaaattagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 9670510  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    |||||| ||||  ||  ||||||||||||||    
T  9670509 tccctcgctaatttttctttttctagtagtg 9670479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 190 - 318
Target Start/End: Original strand, 25026565 - 25026695
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| ||||| |||||||||||||||||||||||||||||| || |||||  ||||||||||  |||||||||| ||||||||    
T  25026565 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgagaaatttcattttttccgtcactaattt 25026664  T
Q  288 ccctccctaaacttgttttttctagtagtgt 318  Q
    ||||| ||||  ||  |||||||| ||||||    
T  25026665 ccctcactaattttactttttctaatagtgt 25026695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 175 - 318
Target Start/End: Original strand, 25225092 - 25225235
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgagaaattttgtttttt 274  Q
    |||||||| ||||  |||||||||||  |||| ||||||||||||||||||||| || | |||||||||||| |||||||||||| | ||||| | ||||    
T  25225092 aaaaattaatgagagaaatttagagaaagaaatcgtgaaatccctctctaattctgttattaaattttgcgatcaaagaatttgacagattttatatttt 25225191  T
Q  275 ccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||| | | ||||||||||||||  ||  |||||||||||||||    
T  25225192 ccgtcattgatttccctccctaatttttctttttctagtagtgt 25225235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 165 - 317
Target Start/End: Complemental strand, 30420187 - 30420033
Alignment:
Q  165 actaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg--agaa 262  Q
    |||||||| |||||||||||||| |||||||||||   |||||| |||||| ||||||||||| |||||||||||  | |||||||  ||||||  |  |    
T  30420187 actaaaaaacaaaaattagtgagaaaaatttagagtgagaaaacatgaaattcctctctaatttcgtcactaaatgcttcgaccaagtaatttgtaatga 30420088  T
Q  263 attttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    ||||| |||||||||| |||||||| |||||||||  ||| ||||||||||||||    
T  30420087 attttattttttccgtcactaattttcctccctaattttgctttttctagtagtg 30420033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 202 - 317
Target Start/End: Complemental strand, 9059069 - 9058952
Alignment:
Q  202 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaac 299  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||| |||||  ||||||||||| | ||||| || || |||||||||||||||      
T  9059069 ggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttcagtcacaaatttccctccctaatt 9058970  T
Q  300 ttgttttttctagtagtg 317  Q
    ||| |||| |||||||||    
T  9058969 ttgcttttcctagtagtg 9058952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 168 - 287
Target Start/End: Complemental strand, 18744221 - 18744100
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||||||||||  |||||   ||||  |||||||||    
T  18744221 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttatgaccatgaaatttgtgagaaatt 18744122  T
Q  266 ttgttttttccgttactaattt 287  Q
    |  |||||||||| ||||||||    
T  18744121 tcattttttccgtcactaattt 18744100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 168 - 318
Target Start/End: Original strand, 16915355 - 16915507
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||| | |||||||| || ||||||  ||||||| ||||||||||  |||||||||||||||||||||  ||||  ||||| |||    
T  16915355 aaaaaacaaaaattagtgacggaaatttagtgagggaaaatatgaaatctctctctaattttgtcactaaattttgcgaccaacaaatttgtgagagatt 16915454  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    || |||||||| | |||||||| ||||||| |  ||| |||||||||||||||    
T  16915455 ttattttttccatcactaattttcctccctgattttgctttttctagtagtgt 16915507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 168 - 310
Target Start/End: Complemental strand, 30568150 - 30568006
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||| | |||||| | || ||||||||| ||||| |||||||||||||||| |||||||| |||||| ||||||  |||| ||||    
T  30568150 aaaaatcaaaaattagtgaaggaaattttgtgagggaaaacgtaaaatctctctctaattccgtcattaaattttacgaccatagaatttgtgaggaatt 30568051  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttct 310  Q
    |  |||||||||| ||||||||| ||| ||||  |||||||||||    
T  30568050 tcattttttccgtcactaatttcgctcgctaattttgttttttct 30568006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 45532718 - 45532578
Alignment:
Q  180 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccg 277  Q
    ||||||||| |||||||| || ||||||||| |||||||||||||||||||||| |||||||||||| |||  ||||  |||| |||||  |||||||||    
T  45532718 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaatttcattttttccg 45532619  T
Q  278 ttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    | |||||||||||||  |||  ||| |||||||| ||||||    
T  45532618 tcactaatttccctcgttaattttgctttttctaatagtgt 45532578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 318
Target Start/End: Original strand, 44783475 - 44783621
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctct-ctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttt 271  Q
    |||||||| ||||| | |||||  || ||||||| |||||||||||| |||||||||||| |||||||||||||||| |||||  |||| |||||  |||    
T  44783475 aaaaattaatgagggatatttatcgaaggaaaacatgaaatccctcttctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattt 44783574  T
Q  272 tttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    ||||||| ||||||||||||| |||   ||| |||||||||||||||    
T  44783575 tttccgtcactaatttccctcgctagttttgctttttctagtagtgt 44783621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 189 - 292
Target Start/End: Complemental strand, 9239411 - 9239306
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || |||||||||||||||||||||||||||||||| | |||||||||||||| |||||  |||| |||||  |||||||||| |||||||    
T  9239411 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcattcaattttgcgaccaaggaatttgtgagcaatttcattttttccgtcactaatt 9239312  T
Q  287 tccctc 292  Q
    ||||||    
T  9239311 tccctc 9239306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 7112076 - 7111946
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || |||||| || |||||||||| |||||||||||||||||||| |||||||  ||||  |||| |||||  |||||||||| |||||||    
T  7112076 aaaaattagtgagggaaaatgtaaaatccctctataattccgtcactaaatttttcgaccaagaaatttgtgaggaatttcattttttccgtcactaatt 7111977  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    |||||| ||||  ||| ||||||||||||||    
T  7111976 tccctcgctaattttgctttttctagtagtg 7111946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 175 - 319
Target Start/End: Original strand, 12071955 - 12072101
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    |||||||||||||| | |||||| || ||||||| | ||||||||||||||||||||||||||||||||||| ||| |||||  |||  |||||  ||||    
T  12071955 aaaaattagtgagggatatttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgatcaaggaatttatgaagaatttcatttt 12072054  T
Q  273 ttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |||  | ||||||||| ||| ||||  ||| |||||||| |||||||    
T  12072055 ttcgatcactaatttcgctcgctaattttgctttttctaatagtgta 12072101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 297
Target Start/End: Original strand, 12105990 - 12106099
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||  ||||||||||| |||||||| | | |||||    
T  12105990 aaaaattagtgagggaaaacatgaaacccctctctaattccgtcactaaa-tttgcgaccaaagaatttatgagaaattttattttttccatcaataatt 12106088  T
Q  287 tccctccctaa 297  Q
    |||||| ||||    
T  12106089 tccctcgctaa 12106099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 297
Target Start/End: Original strand, 29625332 - 29625442
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || |||||||||||||||||||||||||||||||||||||||||||||| |  |||||  |||| |||||  |||||||||| | |||||    
T  29625332 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatggaatttgtgaggaatttcattttttccgtcattaatt 29625431  T
Q  287 tccctccctaa 297  Q
    |||||| ||||    
T  29625432 tccctcgctaa 29625442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 317
Target Start/End: Original strand, 30507994 - 30508124
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || |||||| || ||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||| |||||| ||| ||  |||    
T  30507994 aaaaattagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatttttttcgtcacagatt 30508093  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    | |||| ||||  ||| ||||||||||||||    
T  30508094 ttcctcgctaattttgctttttctagtagtg 30508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 202 - 317
Target Start/End: Complemental strand, 9238742 - 9238625
Alignment:
Q  202 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaac 299  Q
    ||||||||| ||||  |||||||||||||||||||||||||||||||||  ||||  |||| |||||  |||||||||| ||||||||||||| ||||      
T  9238742 ggaaaacgtaaaatttctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 9238643  T
Q  300 ttgttttttctagtagtg 317  Q
    ||| ||||| ||||||||    
T  9238642 ttgctttttttagtagtg 9238625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 169 - 316
Target Start/End: Original strand, 29238410 - 29238559
Alignment:
Q  169 aaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattt 266  Q
    |||| |||||||||| || | |||||||| || | ||||| | ||||| || |||||||| ||||||||||||||  |||||||||||  ||||| ||||    
T  29238410 aaaaacaaaaattagcgatggaaatttagtgaggaaaaacataaaatctctatctaattctgtcactaaattttgaaaccaaagaatttgtgagagattt 29238509  T
Q  267 tgttttttccgttactaatttccctccctaaacttgttttttctagtagt 316  Q
    | |||||||||| | |||||||||||||||   |||||||| ||||||||    
T  29238510 tattttttccgtcaataatttccctccctagttttgtttttcctagtagt 29238559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 189 - 318
Target Start/End: Complemental strand, 4606959 - 4606828
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || |||||| |||||||| |||||||||||||||||||||||||||| ||||  ||||  ||| | ||||| |||| ||||| |||||||    
T  4606959 aaaaattagtgagggaaaaagtgaaatcactctctaattccgtcactaaattttgcggccaagaaatttgtgacagattttattttgtccgtcactaatt 4606860  T
Q  287 tccctccctaaacttgttttttctagtagtgt 318  Q
    |||||||||||  ||  |||| ||||||||||    
T  4606859 tccctccctaattttacttttcctagtagtgt 4606828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 3612972 - 3613071
Alignment:
Q  160 acactactaaaaagcaaaaa-ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    |||||||||||||  ||||| ||||||||  || |||||||| | |||||||||||| ||||||||||| |||||||||| ||||||||||| |||||||    
T  3612972 acactactaaaaaagaaaaacttagtgagagaattttagagaggaaaaacgtgaaattcctctctaatttcgtcactaaaatttgcgaccaaggaatttg 3613071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 317
Target Start/End: Original strand, 54539294 - 54539423
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| ||||| |||| ||||| ||||||||||||||||||| || |||||  |||| |||||  |||||||||| ||||||||    
T  54539294 aaatttagtgagggaaaacgtaaaatcactctttaattgcgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 54539393  T
Q  288 ccctccctaaacttgttttttctagtagtg 317  Q
     |||  ||||  ||| ||||||||||||||    
T  54539394 tccttgctaattttgctttttctagtagtg 54539423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 14944753 - 14944814
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaa 250  Q
    |||| |||| || ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  14944753 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 14944814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 317
Target Start/End: Original strand, 45091282 - 45091398
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgagaaattttgttttttccgttactaatttcc 289  Q
    |||||||| || ||||||||| |||||| ||||||||||||||||||||||||||||           ||| |||||  |||||||||| ||||||||||    
T  45091282 aaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcga-----------gaggaatttcattttttccgtcactaatttcc 45091370  T
Q  290 ctccctaaacttgttttttctagtagtg 317  Q
    ||| ||||  ||||||||||||||||||    
T  45091371 ctcgctaattttgttttttctagtagtg 45091398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 4627207 - 4627079
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || |||||| || ||||| |||||||||| |||||||||||||| ||| |||  ||||  |||| |||||  |||||||||| | ||||||    
T  4627207 aaatttagtgagggaaaatgtaaaatctctctctaatttcgtcactaaattttacgatcaagaaatttgtgaggaatttcattttttccgtcattaattt 4627108  T
Q  288 ccctccctaaacttgttttttctagtagt 316  Q
    ||||| ||||  ||| |||||||||||||    
T  4627107 ccctcgctaattttgctttttctagtagt 4627079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 287
Target Start/End: Original strand, 313615 - 313694
Alignment:
Q  210 tgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    ||||||||||||||||||  || ||||||||||||||||||||||||  ||||  ||||| |||||||||| ||||||||    
T  313615 tgaaatccctctctaattatgttactaaattttgcgaccaaagaatttatgagggattttattttttccgtcactaattt 313694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 297
Target Start/End: Original strand, 34557190 - 34557300
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgagaa--attttgttttttccgttactaatt 286  Q
    ||||||||| || |||||| || |||||  ||| ||||||||||| ||||||||| |||||| ||||||| |||  ||||| |||||||||| |||||||    
T  34557190 aaaatttagcgagggaaaaggtaaaatctgtctttaattccgtcattaaattttgtgaccaaggaatttgtgaaggattttattttttccgtcactaatt 34557289  T
Q  287 tccctccctaa 297  Q
    | |||| ||||    
T  34557290 ttcctcactaa 34557300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 212 - 317
Target Start/End: Original strand, 42055427 - 42055534
Alignment:
Q  212 aaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttc 309  Q
    ||||| ||| |||||||||| |||||||||||||||||| |||||  |||| |||||  |||||| ||| ||  ||||||||| ||||  ||| ||||||    
T  42055427 aaatcactcactaattccgttactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcacagatttccctcgctaattttgctttttc 42055526  T
Q  310 tagtagtg 317  Q
    ||||||||    
T  42055527 tagtagtg 42055534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 4068811 - 4068749
Alignment:
Q  178 aattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaatt 240  Q
    |||||| || ||||||||||| ||||||||| | |||| |||||||||||| |||||||||||    
T  4068811 aattagcgatgaaaatttagaaatggaaaacataaaattcctctctaattctgtcactaaatt 4068749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 287
Target Start/End: Original strand, 6553811 - 6553911
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||| ||| ||||||||||||||||||  || ||||||||||||||||||  ||||  ||||  ||||| |||||||||| |||||||    
T  6553811 aaaaattagtgagggataacatgaaatccctctctaattatgttactaaattttgcgaccaagaaatttatgagggattttattttttccgtcactaatt 6553910  T
Q  287 t 287  Q
    |    
T  6553911 t 6553911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 23104371 - 23104424
Alignment:
Q  205 aaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    |||| |||||||||||||||||   ||| |||||||||||||||| ||||||||    
T  23104371 aaacatgaaatccctctctaatcatgtccctaaattttgcgaccatagaatttg 23104424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 1518353 - 1518313
Alignment:
Q  203 gaaaacgtgaaatccctctctaattccgtcactaaattttg 243  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  1518353 gaaaacgtgaaatccatctctaattccattactaaattttg 1518313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 3e-45; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 168 - 297
Target Start/End: Complemental strand, 27428163 - 27428032
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  | || ||||    
T  27428163 aaaaagaaaaaattagtgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttattagcaatt 27428064  T
Q  266 ttgttttttccgttactaatttccctccctaa 297  Q
    || |||||| ||| ||||||||||||||||||    
T  27428063 ttatttttttcgtcactaatttccctccctaa 27428032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 33818712 - 33818559
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  |||| ||||    
T  33818712 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatt 33818613  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    || | |||||||| || |||||||||||| ||  ||| ||||||||||||||||    
T  33818612 ttatgttttccgtcacaaatttccctccccaattttgctttttctagtagtgta 33818559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 168 - 318
Target Start/End: Complemental strand, 16121990 - 16121838
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||||||||||| |||||| |||||  |||| ||||    
T  16121990 aaaaaccaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatt 16121891  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    || |||||||||| ||||||||||||| ||||  ||| |||||||||||||||    
T  16121890 ttattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 16121838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 161 - 318
Target Start/End: Complemental strand, 12328384 - 12328225
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tg 258  Q
    |||||||||||| ||||||||||||||| | |||||| || ||||||| |||||| |||||||||||||||||||||||||||||| |||  ||||  ||    
T  12328384 cactactaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgatcaagaaatttgtg 12328285  T
Q  259 agaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    || |||||  |||||||||||||||||||||||| ||||  ||| |||||||||||||||    
T  12328284 aggaatttcattttttccgttactaatttccctcactaattttgctttttctagtagtgt 12328225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 161 - 319
Target Start/End: Complemental strand, 7003886 - 7003728
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgag 260  Q
    |||||||||||| |||| |||||||||| |||||| | || |||||||||||||||  |||||||||||||||||||||||||||| ||  ||||||| |    
T  7003886 cactactaaaaaacaaatattagtgagggaaattttgtgagggaaaacgtgaaatc--tctctaattccgtcactaaattttgcgatcatggaatttgtg 7003789  T
Q  261 a--aattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||| |||||||||| ||||||||||||| ||||  ||||||||||||||||||||    
T  7003788 aggaattttcttttttccgtcactaatttccctcgctaattttgttttttctagtagtgta 7003728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 7888775 - 7888936
Alignment:
Q  159 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt- 256  Q
    ||||||||||||||  |||||||||||||||||||||||| || ||||||||| |||||||||||||| |||||||||||||||| ||||||| |||||     
T  7888775 aacactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttacgaccaaggaattt 7888874  T
Q  257 -tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
     |||| |||||  |||||||||| | ||||||||||| ||||  ||| ||||||||||||||    
T  7888875 gtgaggaatttcattttttccgtcaataatttccctcgctaattttgctttttctagtagtg 7888936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 168 - 318
Target Start/End: Original strand, 618282 - 618434
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  |||| ||||    
T  618282 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatt 618381  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |  |||||||||| ||||||||||||| ||||  ||| |||||||| ||||||    
T  618382 tcattttttccgtcactaatttccctcgctaattttgctttttctaatagtgt 618434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 12045705 - 12045866
Alignment:
Q  159 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt- 256  Q
    ||||||||||||||  ||||||||||||||| |||||||| || ||||||||| |||||| |||||||||||||||||||||||| |||||||  ||||     
T  12045705 aacactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttacgaccaagaaattt 12045804  T
Q  257 -tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
     |||| |||||  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  12045805 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 12045866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 158 - 320
Target Start/End: Complemental strand, 17036574 - 17036409
Alignment:
Q  158 taacactactaaaaa-gcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt 256  Q
    ||||||||||||||| ||||||||| ||||||  |||||||||| ||||||||  ||||||||||||||||| ||||||||||||||||||||| |||||    
T  17036574 taacactactaaaaacgcaaaaatttgtgagggtaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatt 17036475  T
Q  257 --tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgtaa 320  Q
      |||| |||||| ||| |||||| |||||| || ||||||||  |||  ||||||||||||||||    
T  17036474 tgtgaggaattttatttcttccgtcactaatctcgctccctaattttgcattttctagtagtgtaa 17036409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 180 - 319
Target Start/End: Complemental strand, 17039770 - 17039629
Alignment:
Q  180 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccg 277  Q
    ||||||||| |||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||  |||||||||    
T  17039770 ttagtgagggaaatatagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 17039671  T
Q  278 ttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    | |||||||| |||| ||||  ||| ||||||||||||||||    
T  17039670 tcactaattttcctcactaattttgctttttctagtagtgta 17039629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 168 - 319
Target Start/End: Original strand, 20959496 - 20959649
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    |||||| |||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| || |||||  |||| ||||    
T  20959496 aaaaagtaaaaattagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttacgactaaggaatttgtgaggaatt 20959595  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    || |||||||||| | | |||| |||||||||  ||  ||||||||||||||||    
T  20959596 ttattttttccgtcagtgattttcctccctaattttactttttctagtagtgta 20959649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 36196382 - 36196533
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || |||||| |||||||||||||||||||||||||||||||||||||||||  || ||  |||| ||||    
T  36196382 aaaaaacaaaaattagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccatggattttgtgaggaatt 36196481  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  36196482 tcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 36196533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 36716351 - 36716200
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| |||||||||||||||||||||| | || |||||||||||||||| ||||||||||| ||| |||||||| |||||| ||||||  |||| ||||    
T  36716351 aaaaaacaaaaattagtgaggaaaattttgtgagggaaaacgtgaaatccttctctaattccttcattaaattttacgaccatagaatttgtgaggaatt 36716252  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||| | ||||||||||||| ||||  ||||||||||||||||||    
T  36716251 tcattttttccatcactaatttccctcgctaattttgttttttctagtagtg 36716200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 168 - 318
Target Start/End: Complemental strand, 25673379 - 25673228
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg-agaaattt 266  Q
    ||||| ||||| ||||||||| |||||||| ||  |||||| |||||||||||||||||||||||||| |||||||||||||||||||||| || | |||    
T  25673379 aaaaaacaaaatttagtgagggaaatttagtgacagaaaacatgaaatccctctctaattccgtcactgaattttgcgaccaaagaatttgtaggagttt 25673280  T
Q  267 tgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    | |||||||||| |||||||| |||||||||  ||  |||| ||||||||||    
T  25673279 tattttttccgtcactaattttcctccctaatttttattttcctagtagtgt 25673228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 159 - 317
Target Start/End: Complemental strand, 8887012 - 8886851
Alignment:
Q  159 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt- 256  Q
    ||||||||||||||  ||||||||||||||| |||||||| || |||||| || ||||||||||||||||||||||||||||||||||||||| |||||     
T  8887012 aacactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 8886913  T
Q  257 -tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
     |||| |||||  |||||| ||| || ||||| |||| ||||  ||| ||||||||||||||    
T  8886912 gtgaggaatttcatttttttcgtcacaaattttcctcgctaattttgctttttctagtagtg 8886851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 168 - 320
Target Start/End: Complemental strand, 10420403 - 10420249
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaa-agaatt-tgagaaatt 265  Q
    |||||| ||||||||||||||||| |||||||| ||||||| ||||||||||||||||||  ||||||||||||||||||||| | |||| ||||  |||    
T  10420403 aaaaagaaaaaattagtgaggaaattttagagagggaaaacatgaaatccctctctaattttgtcactaaattttgcgaccaacaaaattgtgagggatt 10420304  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgtaa 320  Q
    || |||||||||| ||||||||||||| ||||  ||| ||| | |||||||||||    
T  10420303 ttattttttccgtcactaatttccctctctaattttgatttctttagtagtgtaa 10420249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 189 - 318
Target Start/End: Complemental strand, 746998 - 746867
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||  |||||||||| |||||||    
T  746998 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 746899  T
Q  287 tccctccctaaacttgttttttctagtagtgt 318  Q
    |||||| ||||  ||| ||||||| |||||||    
T  746898 tccctcgctaattttgctttttcttgtagtgt 746867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 2472865 - 2472714
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||| ||||| | |||||| || ||||||| |||||||||||||||||||||||| |||||||||||||||| |||||  |||| ||||    
T  2472865 aaaaaacaaaaattaatgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatt 2472766  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| |||||||||| || ||||  ||| ||||||||||||||    
T  2472765 tcattttttccgtcactaatttccttcactaattttgctttttctagtagtg 2472714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 189 - 318
Target Start/End: Original strand, 10494746 - 10494877
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||  |||||||||| |||||||    
T  10494746 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 10494845  T
Q  287 tccctccctaaacttgttttttctagtagtgt 318  Q
    |||||| ||| | ||| |||||||||||||||    
T  10494846 tccctcgctacatttgctttttctagtagtgt 10494877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 189 - 318
Target Start/End: Complemental strand, 25397918 - 25397787
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgaga--aattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||| | |||||||| || ||||    
T  25397918 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccgtcacaaatt 25397819  T
Q  287 tccctccctaaacttgttttttctagtagtgt 318  Q
    |||||||||||  ||| |||| ||||||||||    
T  25397818 tccctccctaattttgcttttcctagtagtgt 25397787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 35620503 - 35620343
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    |||||||||||||  ||||||||| ||||| | |||||| || ||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  35620503 acactactaaaaaaacaaaaattaatgagggatatttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgaccaaggaatttg 35620404  T
Q  259 aga-aattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
     ||  | ||| |||||||||| ||||||||||||| ||||  ||| |||||||| ||||||    
T  35620403 tgaggaatttattttttccgtcactaatttccctcgctaattttgctttttctaatagtgt 35620343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 175 - 318
Target Start/End: Complemental strand, 13620271 - 13620126
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    |||||||||||| | |||||||| || ||||||| ||||||||||||||||||| ||||| |||||||||||||||  ||||  ||||| ||||| ||||    
T  13620271 aaaaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcacaaaattttgcgaccaacaaatttgtgagagattttatttt 13620172  T
Q  273 ttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||||| |||||||||||||||| |  ||  |||||||||||||||    
T  13620171 ttccgtcactaatttccctccctgatttttctttttctagtagtgt 13620126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 175 - 317
Target Start/End: Original strand, 23975630 - 23975775
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    |||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||   ||||  |||| |||||  ||||    
T  23975630 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcatttt 23975729  T
Q  273 ttccgttactaatttccctccctaaacttg-ttttttctagtagtg 317  Q
    |||||| ||||||||||||| ||||  ||| |||||| ||||||||    
T  23975730 ttccgtcactaatttccctcgctaattttgcttttttttagtagtg 23975775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 8109011 - 8108860
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||  |||||| | || ||||||| |||||| |||||||||||||||||||||||||||||||||   ||||  |||| ||||    
T  8109011 aaaaaacaaaaattagtgagagaaattttgtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatt 8108912  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  8108911 tcattttttccgtcactaatttccctctctaattttgctttttctagtagtg 8108860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 11927937 - 11927786
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    |||| |||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||  ||||  ||||  |||    
T  11927937 aaaatgcaaaaattagtgagggaattttagagacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacgaagtaatttgtgagggatt 11927838  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || |||||||| |  |||||||  ||||||||  ||| |||||||| |||||    
T  11927837 ttattttttccatctctaatttatctccctaattttgctttttctaatagtg 11927786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 15060961 - 15061112
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || | ||||||||||||||||||||||||||||||||||||||||||||||   ||||  |||| ||||    
T  15060961 aaaaaacaaaaattagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatt 15061060  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  ||||||| || ||||||||||||| ||||  ||| ||||||| ||||||    
T  15061061 tcattttttcggtcactaatttccctcgctaattttgctttttctggtagtg 15061112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 36832041 - 36831890
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||||| || |||||| || |||||||||||||||||| ||||||||||||| |||||| |||||  |||| ||||    
T  36832041 aaaaaacaaaaattagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccatcactaaattttgtgaccaaggaatttatgaggaatt 36831942  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||| |||  |||||||||||| ||||  ||| ||||||||||||||    
T  36831941 tcatttttttcgtccctaatttccctcactaattttgctttttctagtagtg 36831890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 38837801 - 38837671
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| |||||||||||||||||| |||||||||||||||||||| |||||  |||| |||||  |||||||||| |||||||    
T  38837801 aaaaattagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 38837702  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    |||||| ||||  ||| ||||||||||||||    
T  38837701 tccctcgctaattttgctttttctagtagtg 38837671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 168 - 250
Target Start/End: Original strand, 17079393 - 17079475
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaa 250  Q
    ||||||||||||||||||||| ||||||||| | ||||||| | |||||||||||||||||||||||||||||||||||||||    
T  17079393 aaaaagcaaaaattagtgagggaaatttagaaagggaaaacatcaaatccctctctaattccgtcactaaattttgcgaccaa 17079475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 318
Target Start/End: Complemental strand, 23423900 - 23423755
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    |||||||||||||  |||||||| || ||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||  |||| |||||| | ||    
T  23423900 aaaaattagtgagtgaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgtt 23423801  T
Q  273 ttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    || ||| || |||||||||||||||  ||| || | ||||||||||    
T  23423800 tttcgtcacaaatttccctccctaattttgcttatcctagtagtgt 23423755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 5982633 - 5982785
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||| |||||||||||||| || ||||||| | ||||||||||||||||||||||||||| ||||||||||| |||||  |||| ||||    
T  5982633 aaaaatcaaaaattaatgaggaaaatttagtgagggaaaacctaaaatccctctctaattccgtcactaaactttgcgaccaaggaatttgtgaggaatt 5982732  T
Q  266 -ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
        |||||||||| ||||||||||||| || |  ||| ||||||||||||||    
T  5982733 ccatttttttccgtcactaatttccctcgctgattttgctttttctagtagtg 5982785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 189 - 318
Target Start/End: Original strand, 40484053 - 40484184
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  | ||||||||  || ||||||| |||||||    
T  40484053 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttataagaaatttcattatttccgtcactaatt 40484152  T
Q  287 tccctccctaaacttgttttttctagtagtgt 318  Q
    |||||| ||||  ||  |||||||||||||||    
T  40484153 tccctcgctaatttttctttttctagtagtgt 40484184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 16632004 - 16631874
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| |||||||||||||||||||||||||||||||| |||||| |||||  |||| |||||  |||||||||| |||||||    
T  16632004 aaaaattagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 16631905  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    |||||| ||||  ||  ||||||||||||||    
T  16631904 tccctcgctaatttttctttttctagtagtg 16631874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 319
Target Start/End: Original strand, 17986704 - 17986870
Alignment:
Q  156 tataacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaa 254  Q
    |||| ||||||||||||  ||||||||||||||| | |||||| || ||||||| |||||| | ||||||||||||||||||||||||||||| || |||    
T  17986704 tatatcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaattcttctctaattccgtcactaaattttgcgacgaaggaa 17986803  T
Q  255 tttgaga--aattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |||| ||  |||||  |||||||||| ||||||||| ||| ||||  ||  ||||||||| ||||||    
T  17986804 tttgtgaagaatttcattttttccgtcactaatttctctcactaattttactttttctagcagtgta 17986870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 190 - 317
Target Start/End: Complemental strand, 26708714 - 26708585
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| |||| |||||||||||||||||||||||||||||||||| |||||  |||| |||||  |||||||||  ||||||||    
T  26708714 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaattt 26708615  T
Q  288 ccctccctaaacttgttttttctagtagtg 317  Q
    ||||| ||||  |||  |||||||||||||    
T  26708614 ccctcgctaattttgcattttctagtagtg 26708585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 190 - 317
Target Start/End: Complemental strand, 26978448 - 26978319
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| |||| |||||||||||||||||||||||||||||||||| |||||  |||| |||||  |||||||||  ||||||||    
T  26978448 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaattt 26978349  T
Q  288 ccctccctaaacttgttttttctagtagtg 317  Q
    ||||| ||||  |||  |||||||||||||    
T  26978348 ccctcgctaattttgcattttctagtagtg 26978319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 175 - 318
Target Start/End: Complemental strand, 28265619 - 28265474
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    |||||||| ||||| |||||| | || |||| |||| ||||||||||||||||||||||||||||||||||||||  |||||  |||| |||||  ||||    
T  28265619 aaaaattaatgagggaaattttgtgagggaagacgtaaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcatttt 28265520  T
Q  273 ttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||||| |||||||| |||| ||||  ||  |||||||||||||||    
T  28265519 ttccgtcactaattttcctcgctaattttactttttctagtagtgt 28265474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 13974229 - 13974078
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgaga--aatt 265  Q
    ||||| ||||||||||||||| |||||| | || |||||||||||||||||||||| |||||||||||||||||  ||||||   |||||| ||  ||||    
T  13974229 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctgattccgtcactaaatttcacgaccatgaaatttgtgaagaatt 13974130  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||| |||  |||||||||||| ||||  ||| ||||||||||||||    
T  13974129 tcatttttttcgtcgctaatttccctcgctaattttgctttttctagtagtg 13974078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 190 - 319
Target Start/End: Complemental strand, 24138970 - 24138839
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| ||||| |||||||||||||||||||||||||||||||||  ||||  ||||||||||  |||||||||| || |||||    
T  24138970 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaagcaatttgtgagaaatttcattttttccgtcaccaattt 24138871  T
Q  288 ccctccctaaacttgttttttctagtagtgta 319  Q
     |||| ||||  ||| |||||||| |||||||    
T  24138870 tcctcgctaattttgctttttctaatagtgta 24138839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 316
Target Start/End: Complemental strand, 33735132 - 33734974
Alignment:
Q  159 aacactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    ||||||| |||||| |||||||||||| || ||||||| ||| | ||||| ||||| |||||| |||||||||||||||||||||||||||| |||||      
T  33735132 aacactagtaaaaaacaaaaattagtgggggaaatttataga-gaaaaacatgaaacccctctttaattccgtcactaaattttgcgaccaaggaattta 33735034  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagt 316  Q
    ||||  ||||| |||||||| | | |||||| |||||||||  ||| |||| ||||||||    
T  33735033 tgagggattttattttttccctcattaattttcctccctaattttgcttttcctagtagt 33734974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 317
Target Start/End: Original strand, 23408959 - 23409120
Alignment:
Q  160 acactactaaaa-agcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||| | | ||| ||||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||||||||||| |||  ||||      
T  23408959 acactactaaaacaactaaatttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttg 23409058  T
Q  257 tgagaaattt-tgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| |||||   |||||||||| ||||||||  ||| ||||  ||| ||||||||||||||    
T  23409059 tgaggaatttcatttttttccgtcactaatttttctcgctaattttgctttttctagtagtg 23409120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 32726869 - 32726787
Alignment:
Q  176 aaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    ||||||||||| | ||||||||||| |||||| |||||||  ||||||||||||||||||||||||||||||||| |||||||    
T  32726869 aaaattagtgaaggaaatttagagagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccaaggaatttg 32726787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 33816909 - 33816819
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    ||||| ||||| ||||||||| |||||||| || ||||||| |||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  33816909 aaaaaacaaaagttagtgagggaaatttagtgagggaaaacatgaaattcctttctaattccgtcactaaattttgcgaccaaggaatttg 33816819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 160 - 297
Target Start/End: Complemental strand, 3080856 - 3080716
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||| |||||||||| || ||||||| ||||||||||||| |||| | ||||||| ||||| ||| ||||||||      
T  3080856 acactactaaaaaaacaaaaattagtgaagaaaatttagtgagggaaaacatgaaatccctctcaaatttcatcactaagttttgtgactaaagaatttg 3080757  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaa 297  Q
    ||||| ||||| |||||||| | || ||||||||| |||||    
T  3080756 tgagagattttattttttccatcacgaatttccctacctaa 3080716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 25652734 - 25652583
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||| || |||||| |||||||| || |||||| || ||||||||||||||||||||||| |||||||||||| || |||||  |||| ||||    
T  25652734 aaaaaacaaaatttggtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcacaaaattttgcgactaaggaatttgtgaggaatt 25652635  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  ||||||| || ||| ||||||||| ||||  ||| |||||||| |||||    
T  25652634 tcattttttctgtcactgatttccctcgctaattttgctttttctaatagtg 25652583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 4125318 - 4125188
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || |||||| |||||||| ||||||||||||||||||||||||||||||||   ||||  |||| |||||  |||||||||| |||||||    
T  4125318 aaaaattagtgagggaaaatgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatt 4125219  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    |||||| ||||  ||  ||||||||||||||    
T  4125218 tccctcgctaattttactttttctagtagtg 4125188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 247
Target Start/End: Original strand, 18413533 - 18413623
Alignment:
Q  158 taacactactaaaa-agcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgac 247  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||| ||||| | ||||||||||  |||||||| ||||    
T  18413533 taacactactaaaaaagcaaaaattagtgagggaaatttagagagggaaaacgtgaattccctttttaattccgtcgttaaattttacgac 18413623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 175 - 289
Target Start/End: Complemental strand, 20188085 - 20187969
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    ||||||||||||| ||||||||| ||  ||||||||  |||| ||||||||||| |||| |||||||||||| ||| |||||  |||| |||||| ||||    
T  20188085 aaaaattagtgagaaaaatttagtgagagaaaacgtagaatcactctctaattctgtcattaaattttgcgatcaaggaatttgtgaggaattttatttt 20187986  T
Q  273 ttccgttactaatttcc 289  Q
    |||||| ||||||||||    
T  20187985 ttccgtcactaatttcc 20187969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 292
Target Start/End: Complemental strand, 17772098 - 17771993
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaa--tttgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||| | ||||| ||||||||||||||||||||||||||||| ||| |||  |||||| |||||  |||||||||| |||||||    
T  17772098 aaaaattagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaggaatttttgaggaatttcattttttccgtcactaatt 17771999  T
Q  287 tccctc 292  Q
    ||||||    
T  17771998 tccctc 17771993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 29728006 - 29727928
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaa 237  Q
    |||||||||||||  ||||||||||||||| |||||| | || |||||||||||||| |||||||||||||||||||||    
T  29728006 acactactaaaaaaacaaaaattagtgaggcaaattttgcgagggaaaacgtgaaattcctctctaattccgtcactaa 29727928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 22649473 - 22649406
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaatttt 242  Q
    |||||||| ||||  ||||||||||| |||||||||||||||| ||||||||||||||| ||||||||    
T  22649473 aaaaattaatgagagaaatttagagagggaaaacgtgaaatccttctctaattccgtcattaaatttt 22649406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 31158712 - 31158634
Alignment:
Q  160 acactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaa 238  Q
    |||||| |||||| ||||||| ||||||| ||||||||||| | |||||||||||| |||| |||||||||| ||||||    
T  31158712 acactattaaaaaacaaaaataagtgagggaaatttagagaagaaaaacgtgaaattcctccctaattccgtgactaaa 31158634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 175 - 316
Target Start/End: Complemental strand, 16472325 - 16472182
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaa-ttttgcgaccaaagaatttgagaa--attttgttt 271  Q
    |||||||||||| | ||||||||||| | |||| ||| |||| ||||||||||| ||||||||| |||||||||||| ||||||  |||  ||||| |||    
T  16472325 aaaaattagtgacggaaatttagagaggaaaaaagtggaatcgctctctaattctgtcactaaacttttgcgaccaacgaatttttgaaggattttattt 16472226  T
Q  272 tttccgttactaatttccctccctaaacttgttttttctagtagt 316  Q
    ||| ||  |||||||| |||||| ||  ||| |||||||||||||    
T  16472225 ttttcgacactaattt-cctcccaaattttgctttttctagtagt 16472182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 35778150 - 35778277
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg--agaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||| |||||||||| ||| |||| || | |||||||||||||||| |||||||  ||| ||||| |||||||| | |||||||    
T  35778150 aaaaattagtgagggaaaacatgaaatccctatctcattctgtgattaaattttgcgaccaatgaatttgtgagagattttattttttccatcactaatt 35778249  T
Q  287 tccctccctaaacttgttttttctagta 314  Q
    |||||||| ||  ||  |||||||||||    
T  35778250 tccctcccaaattttactttttctagta 35778277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 31853212 - 31853158
Alignment:
Q  195 tagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 249  Q
    |||||| | ||||| ||||||| ||||||||||||||||||||||||||||||||    
T  31853212 tagagaggaaaaacatgaaatctctctctaattccgtcactaaattttgcgacca 31853158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 213 - 318
Target Start/End: Complemental strand, 23974682 - 23974575
Alignment:
Q  213 aatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttct 310  Q
    ||||||||||||||| ||||| |||||||| |||| || |||||  ||||| ||||| |||||||||| |||||||| ||| |||||  ||  |||| ||    
T  23974682 aatccctctctaatttcgtcattaaattttacgacaaaggaatttgtgagagattttattttttccgtcactaattttccttcctaatttttcttttcct 23974583  T
Q  311 agtagtgt 318  Q
    ||||||||    
T  23974582 agtagtgt 23974575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 36597470 - 36597340
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||| | |||| |||||||||||| ||||||||||||| ||||||| |||||  |||| |||||| | |||||||| |  ||||    
T  36597470 aaaaattagtgagggaaaacataaaattcctctctaattctgtcactaaattttacgaccaaggaatttgtgaggaattttatgttttccgtcataaatt 36597371  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    |  ||||| ||  ||| ||||||||||||||    
T  36597370 tttctcccaaattttgctttttctagtagtg 36597340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 26301919 - 26301965
Alignment:
Q  196 agagatggaaaacgtgaaatccctctctaattccgtcactaaatttt 242  Q
    ||||| ||||||||||||||  |||||||||||| ||||||||||||    
T  26301919 agagagggaaaacgtgaaattgctctctaattccatcactaaatttt 26301965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 5043640 - 5043588
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaatttt 242  Q
    ||||||||||| | |||||| ||||| || ||||||||||| |||||||||||    
T  5043640 aaatttagagaggaaaaacgcgaaattcccctctaattccgccactaaatttt 5043588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 5e-44; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 3823110 - 3823271
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||      
T  3823110 acactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 3823209  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    ||||||||||  |||||||||| ||||||||||||| ||||  ||| |||||||| ||||||    
T  3823210 tgagaaatttcattttttccgtcactaatttccctcgctaattttgctttttctaatagtgt 3823271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 17104016 - 17103863
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||    
T  17104016 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatt 17103917  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    || | |||||||| || |||||| ||| ||||  ||||||||||||||||||||    
T  17103916 ttatgttttccgtcacaaatttctctctctaattttgttttttctagtagtgta 17103863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 161 - 317
Target Start/End: Complemental strand, 17824772 - 17824616
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tg 258  Q
    ||||||||||||  |||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  17824772 cactactaaaaa--aaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtg 17824675  T
Q  259 agaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || |||||| | |||||||| || |||||||||| ||||  ||| ||||||||||||||    
T  17824674 aggaattttatgttttccgtcacaaatttccctctctaattttgctttttctagtagtg 17824616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 161 - 317
Target Start/End: Complemental strand, 24576182 - 24576024
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tg 258  Q
    |||||||||||| ||||||||||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||  ||    
T  24576182 cactactaaaaaacaaaaattagtgagggatatttagcgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtg 24576083  T
Q  259 agaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || |||||  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  24576082 aggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 24576024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 168 - 319
Target Start/End: Original strand, 15251589 - 15251740
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaat-ttgagaaattt 266  Q
    ||||| |||||||||||||||||| |||| ||| |||||||||||||||| |||||||||| |||||||||||||||||||||| |||  ||||| ||||    
T  15251589 aaaaatcaaaaattagtgaggaaa-tttaaagagggaaaacgtgaaatccttctctaattctgtcactaaattttgcgaccaaaaaatcgtgagagattt 15251687  T
Q  267 tgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    | |||||||||| ||||||||||||||||||  ||| |||||| |||||||||    
T  15251688 tattttttccgtcactaatttccctccctaattttgctttttcaagtagtgta 15251740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 158 - 321
Target Start/End: Original strand, 27869213 - 27869379
Alignment:
Q  158 taacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt 256  Q
    |||||||||||||||  ||||||||||||||  | |||||| || ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  27869213 taacactactaaaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaagaatt 27869312  T
Q  257 --tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgtaat 321  Q
      |||| |||||  |||||||| | ||||||||||||| ||||  ||| ||||||||||||||||||    
T  27869313 tgtgaggaatttcattttttccatcactaatttccctcgctaattttgctttttctagtagtgtaat 27869379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 158 - 321
Target Start/End: Complemental strand, 18010221 - 18010056
Alignment:
Q  158 taacactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt- 256  Q
    ||||||||||||||| ||||||||||||||| | |||||  || ||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||     
T  18010221 taacactactaaaaaacaaaaattagtgagggatatttattgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaattt 18010122  T
Q  257 -tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgtaat 321  Q
     |||| |||||  |||||||||| ||||||||| ||| ||||  ||| ||||||| ||||||||||    
T  18010121 gtgaggaatttcattttttccgtcactaatttctctcgctaattttgctttttctggtagtgtaat 18010056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 168 - 319
Target Start/End: Original strand, 19240853 - 19241006
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || ||||||||| |||| |||||||||||||||||||||||||||||||||| |||||  |||| ||||    
T  19240853 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatt 19240952  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||||    
T  19240953 tcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 19241006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 168 - 319
Target Start/End: Original strand, 19314037 - 19314190
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || ||||||||| |||| |||||||||||||||||||||||||||||||||| |||||  |||| ||||    
T  19314037 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatt 19314136  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||||    
T  19314137 tcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 19314190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 160 - 317
Target Start/End: Original strand, 4330955 - 4331115
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||| | || |||||||||||||| |||||||||||||||||||||||||||||||||  |||||      
T  4330955 acactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttg 4331054  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| |||||  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  4331055 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 4331115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 161 - 317
Target Start/End: Original strand, 29345049 - 29345208
Alignment:
Q  161 cactacta-aaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttga 259  Q
    |||||||| ||||| ||||||| |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| || ||  ||||||     
T  29345049 cactactagaaaagaaaaaatttgtgagggaaatttagagagggaaaacgtgaaatccctccctaattccgtcactaaattttgccactaagaaatttgt 29345148  T
Q  260 gaa--attttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||  ||||| |||||||||| ||||||||||||||||||  ||  ||||||||||||||    
T  29345149 gaaagattttattttttccgtcactaatttccctccctaatttttctttttctagtagtg 29345208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 160 - 315
Target Start/End: Original strand, 37992076 - 37992234
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    |||||||||||||  |||||||||||||||||||||||| || ||||||| ||||||| |||||||||||||||||||||||||||||| ||||||| ||    
T  37992076 acactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaagaatatg 37992175  T
Q  259 agaa--attttgttttttccgttactaatttccctccctaaacttgttttttctagtag 315  Q
     |||  ||||| | |||||||| |||||||| |||||||||  ||| |||| |||||||    
T  37992176 tgaaggattttatgttttccgtcactaattttcctccctaattttgcttttcctagtag 37992234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 167 - 317
Target Start/End: Complemental strand, 8555456 - 8555304
Alignment:
Q  167 taaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaat 264  Q
    |||||| | ||| ||||||||| |||||||| || ||||||| | ||||| |||||||||||||||||||||||||||||||||||||||  |||| |||    
T  8555456 taaaaaactaaatttagtgagggaaatttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaat 8555357  T
Q  265 tttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    ||  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  8555356 ttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 8555304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 4647915 - 4647754
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||  |||||| | || |||||| ||||||||||||||||||||||||||||||||||||||| |   ||||      
T  4647915 acactactaaaaaaacaaaaattagtgagagaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttg 4647816  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||| |||||  |||||||||| ||||||||||||| ||||  |||||||||||||||||||    
T  4647815 tgaggaatttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtgt 4647754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 168 - 319
Target Start/End: Original strand, 21350464 - 21350617
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||||| || | ||||||| |||||| |||||||||||||||||||||||||||||||| |||||  |||| ||||    
T  21350464 aaaaaacaaaaattagtgagggaaatttagtgaggaaaaacgtaaaatccatctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatt 21350563  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||||||| ||||||||||||  || |  ||| ||||||||||||||||    
T  21350564 tcattttttccgtcactaatttcccttgcttattttgctttttctagtagtgta 21350617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 26399137 - 26399028
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||| ||||| |||||||||| |||||||    
T  26399137 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccgtcactaatt 26399038  T
Q  287 tccctcccta 296  Q
    ||||||||||    
T  26399037 tccctcccta 26399028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 33652544 - 33652705
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| | |||||| || ||||||| |||||||| ||||||| |||||||||||||||||||||||| |||||      
T  33652544 acactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccttctctaactccgtcactaaattttgcgaccaaggaatttg 33652643  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||| |||||  |||||||||| ||||||||||||| ||||  ||| ||||||| |||||||    
T  33652644 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctggtagtgt 33652705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 40289571 - 40289419
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||||| || ||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||  ||||||| |    
T  40289571 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctc-ctaattccgtcactaaattttgcgaccaaggaatttgtgagaaaat 40289473  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||||||| |||||||| |||| ||||  ||  ||||||||||||||||    
T  40289472 tcattttttccgtcactaattttcctcgctaattttaatttttctagtagtgta 40289419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 17810284 - 17810435
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||| ||||||||||||||||||||||  ||||  |||| ||||    
T  17810284 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatt 17810383  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| |||||||| |||| ||||  ||| ||||||||||||||    
T  17810384 tcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 17810435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 190 - 319
Target Start/End: Original strand, 19256220 - 19256351
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||  ||||  |||| |||||| |||||||||| ||||||||    
T  19256220 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccgtcactaattt 19256319  T
Q  288 ccctccctaaacttgttttttctagtagtgta 319  Q
    |||||  |||  ||| ||||||||||||||||    
T  19256320 ccctcgttaattttgctttttctagtagtgta 19256351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 27910915 - 27910764
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||  || ||||||| |||||||||||||||||||||||||||||||||| ||| || |||||  |||| ||||    
T  27910915 aaaaaacaaaaattagtgagggatatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatt 27910816  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  27910815 tcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 27910764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 27957334 - 27957183
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||  || ||||||| |||||||||||||||||||||||||||||||||| ||| || |||||  |||| ||||    
T  27957334 aaaaaacaaaaattagtgagggatatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatt 27957235  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  27957234 tcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 27957183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 189 - 317
Target Start/End: Original strand, 32247916 - 32248046
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||| |||||  |||||||||| |||||||    
T  32247916 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaatt 32248015  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    ||||||  |||  ||| ||||||||||||||    
T  32248016 tccctcgttaattttgctttttctagtagtg 32248046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 177 - 317
Target Start/End: Complemental strand, 43431701 - 43431559
Alignment:
Q  177 aaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttttt 274  Q
    |||||||||||| |||||||| || ||||||||| |||||||||||||||| |||||||||||||||| ||||| |||||  |||| |||||  ||||||    
T  43431701 aaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcaaccaaggaatttgtgaggaatttcatttttt 43431602  T
Q  275 ccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| ||||||||||||| ||||  ||  ||||||||||||||    
T  43431601 ccgtcactaatttccctcactaatttttctttttctagtagtg 43431559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 22939289 - 22939450
Alignment:
Q  159 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt- 256  Q
    ||||||||||||||  ||||||||||||||  | |||||| || ||||||| ||||||| |||||||||||||||||||||||||||||| || |||||     
T  22939289 aacactactaaaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgacaaaggaattt 22939388  T
Q  257 -tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
     |||| |||||  |||||||||| |||||||||| || ||||  ||| ||||||||||||||    
T  22939389 gtgaggaatttcattttttccgtcactaatttccttcactaattttgctttttctagtagtg 22939450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 159 - 317
Target Start/End: Complemental strand, 24193357 - 24193196
Alignment:
Q  159 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt- 256  Q
    ||||||||||||||  ||||||||||||||  |||||| | || ||||||| ||||||| ||||||||||||||||||||||||||||||||   ||||     
T  24193357 aacactactaaaaaaacaaaaattagtgagagaaattttgtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccatgaaattt 24193258  T
Q  257 -tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
     |||| |||||  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  24193257 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 24193196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 168 - 297
Target Start/End: Complemental strand, 6816534 - 6816403
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||||||||||||||||| ||||||||||||| ||||| |||||  |||||||||    
T  6816534 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgccactaaattttgcaaccaaggaatttgtgagaaatt 6816435  T
Q  266 ttgttttttccgttactaatttccctccctaa 297  Q
    || |||||| | | ||||||||||||| ||||    
T  6816434 ttatttttttcatcactaatttccctcgctaa 6816403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 190 - 317
Target Start/End: Original strand, 11938753 - 11938881
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgaga-aattttgttttttccgttactaatttc 288  Q
    |||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||  | |||  ||||||||| |||||||||    
T  11938753 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttccgtcactaatttc 11938852  T
Q  289 cctccctaaacttgttttttctagtagtg 317  Q
    |||| ||||  ||| ||||||||||||||    
T  11938853 cctcgctaattttgctttttctagtagtg 11938881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 161 - 318
Target Start/End: Original strand, 9631382 - 9631542
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaatt-ccgtcactaaattttgcgaccaaagaatt--t 257  Q
    |||||||||||| |||||||||| |||| |||||| | || ||||||||||||||  |||||||||| |||||||||||||||||||  | ||||||  |    
T  9631382 cactactaaaaaacaaaaattagcgagggaaattttgtgaaggaaaacgtgaaatttctctctaattcccgtcactaaattttgcgagtatagaatttgt 9631481  T
Q  258 gagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    ||| |||||| |||||||||| |||||||| |||  ||||  ||| |||||||||||||||    
T  9631482 gaggaattttattttttccgtcactaattttccttgctaattttgctttttctagtagtgt 9631542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 175 - 317
Target Start/End: Complemental strand, 16062083 - 16061939
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    |||||||||||||| ||||||   || | ||||||||||||| ||||||||||||||||||| |||||||||||| ||||||  |||| |||||  ||||    
T  16062083 aaaaattagtgagggaaattttttgaggaaaaacgtgaaatcactctctaattccgtcactacattttgcgaccatagaatttgtgaggaatttcatttt 16061984  T
Q  273 ttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||||| ||||||||||||| ||||  ||  ||||||||||||||    
T  16061983 ttccgtcactaatttccctcgctaattttactttttctagtagtg 16061939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 189 - 318
Target Start/End: Complemental strand, 19488191 - 19488060
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||  |||||| |||||||||||||||||||||||||||||||||| |||||  |||| |||||  |||||||||| |||||||    
T  19488191 aaaagttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 19488092  T
Q  287 tccctccctaaacttgttttttctagtagtgt 318  Q
    |||||| ||||  ||| |||||||||||||||    
T  19488091 tccctcgctaattttgctttttctagtagtgt 19488060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 189 - 318
Target Start/End: Original strand, 30687943 - 30688074
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    ||||||||| || |||||| || ||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||  ||||||| || ||| |||    
T  30687943 aaaatttagtgaaggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttcggtcactgatt 30688042  T
Q  287 tccctccctaaacttgttttttctagtagtgt 318  Q
    |||||| ||||  ||| |||||||||||||||    
T  30688043 tccctcgctaattttgctttttctagtagtgt 30688074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 179 - 318
Target Start/End: Complemental strand, 6084384 - 6084245
Alignment:
Q  179 attagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgagaaattttgttttttccgt 278  Q
    ||||| |||| |||||||||||  ||||| || ||||| |||||||||||||||||||||||||  |||||| ||||||| || ||||| ||||||||||    
T  6084384 attagcgaggtaaatttagagactgaaaatgtcaaatctctctctaattccgtcactaaatttttagaccaaggaatttgggagattttattttttccgt 6084285  T
Q  279 tactaatttccctccctaaacttgttttttctagtagtgt 318  Q
     ||||||||  ||||||||  ||| |||||||| ||||||    
T  6084284 cactaatttatctccctaattttgctttttctattagtgt 6084245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 190 - 318
Target Start/End: Complemental strand, 30467083 - 30466953
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| ||||| |||||||||||| ||||||||||||||||||||  ||||  |||| ||||||  ||||||||| ||||||||    
T  30467083 aaatttagtgagggaaaacgtaaaatctctctctaattccatcactaaattttgcgaccaagaaatttatgaggaattttaatttttccgtcactaattt 30466984  T
Q  288 ccctccctaaacttgttttttctagtagtgt 318  Q
    ||||| ||||  ||| |||||||||||||||    
T  30466983 ccctcgctaattttgctttttctagtagtgt 30466953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 32961631 - 32961797
Alignment:
Q  155 atataacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaga 253  Q
    |||| |||||||||||||  ||||||||||||||| |||||||| || |||||| || |||| |||||||||||||||||||||| |||||||||||  |    
T  32961631 atatcacactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgtcactaaactttgcgaccaagaa 32961730  T
Q  254 att--tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||  |||| |||||  ||||||| || ||| ||||||||| ||||  ||| ||||| |||||||||    
T  32961731 atttgtgaggaatttcattttttctgtcactgatttccctcgctaattttgctttttttagtagtgt 32961797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 190 - 317
Target Start/End: Complemental strand, 5670298 - 5670169
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  |||| ||||   |||||||||| ||||||||    
T  5670298 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattccattttttccgtcactaattt 5670199  T
Q  288 ccctccctaaacttgttttttctagtagtg 317  Q
    |||||  | |  ||||||||||||| ||||    
T  5670198 ccctcgttgattttgttttttctagcagtg 5670169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 168 - 315
Target Start/End: Complemental strand, 9915191 - 9915043
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgaga--aatt 265  Q
    ||||| ||||||||||||||| |||||| | || ||||||||||||||||||||||||| | |||||||||||||||||| |  ||||||| ||  ||||    
T  9915191 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatcctgtcactaaattttgcgac-atggaatttgtgaggaatt 9915093  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtag 315  Q
    |  |||||||||| ||||||||| ||| ||||  ||| ||||||||||||    
T  9915092 tcattttttccgtcactaatttctctcgctaattttgctttttctagtag 9915043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 202 - 317
Target Start/End: Complemental strand, 25655975 - 25655858
Alignment:
Q  202 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaac 299  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||  |||||  |||| |||||  |||||||||| ||||||||||||| ||||      
T  25655975 ggaaaacgtgaaatccctctctaattctatcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcactaatt 25655876  T
Q  300 ttgttttttctagtagtg 317  Q
    ||| ||||||||||||||    
T  25655875 ttgctttttctagtagtg 25655858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 189 - 319
Target Start/End: Complemental strand, 23752416 - 23752284
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || |||||| || ||||| ||||||||||||||||||||||||||||||||| |||||  ||||||||||  |||||||||| ||||||     
T  23752416 aaaaattagtgagggaaaatgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaata 23752317  T
Q  287 tccctccctaaacttgttttttctagtagtgta 319  Q
    |||||| ||||  ||| |||||||| |||||||    
T  23752316 tccctcgctaattttgctttttctaatagtgta 23752284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 29350909 - 29351061
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||| |||||||||||||||||||||   ||||  |||| ||||    
T  29350909 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattgcgtcactaaattttgcgaccatgaaatttgtgaggaatt 29351008  T
Q  266 ttgttttttc-cgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||  || ||||||||||||| ||||  ||| ||||||||||||||    
T  29351009 tcattttttctagtcactaatttccctcgctaattttgctttttctagtagtg 29351061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 6817040 - 6817191
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||||| || |||||| || ||||| |||||||||||||||||||||||||| ||||||  ||||  |||| ||||    
T  6817040 aaaaaacaaaaattagtgagggaaatttagtgagggaaaatgtaaaatctctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatt 6817139  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||| |||| |||  ||||  ||| ||||||||||||||    
T  6817140 tcattttttccgtcactgattttccttgctaattttgctttttctagtagtg 6817191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 289
Target Start/End: Complemental strand, 31344323 - 31344200
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    |||||||||| |||||||||| || |||||||| |||||| ||||||| ||||||||||||||||| |||||||||||| |||  ||||  |||||||||    
T  31344323 aaaaagcaaatattagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcattaaattttgcgatcaagaaatttatgagaaatt 31344224  T
Q  266 ttgttttttccgttactaatttcc 289  Q
    |  |||||||| | ||||||||||    
T  31344223 tgattttttccatcactaatttcc 31344200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 5879181 - 5879303
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||||| || | ||||||| |||| |||||||||||||||||||||||||| |||||||  ||||      
T  5879181 acactactaaaaaaacaaaaattagtgagggaaatttagtgaggaaaaacgtaaaatgcctctctaattccgtcactaaattttacgaccaagaaatttg 5879280  T
Q  257 tgagaaattttgttttttccgtt 279  Q
    |||| |||||| |||||||||||    
T  5879281 tgaggaattttattttttccgtt 5879303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 157 - 320
Target Start/End: Complemental strand, 18844707 - 18844541
Alignment:
Q  157 ataacactactaaaaagc-aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaat 255  Q
    ||||||||||||||||   |||||||||||||| |||||||| || ||||||| ||||||||||||||||||  || | ||||||||||||||||| |||    
T  18844707 ataacactactaaaaaaataaaaattagtgagggaaatttagtgaaggaaaacatgaaatccctctctaattttgttattaaattttgcgaccaaaaaat 18844608  T
Q  256 t--tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgtaa 320  Q
    |  |||| |||||| | |||||| | || |||| || |||||||  ||| |||| ||||||||||||    
T  18844607 ttgtgaggaattttatgttttccatcacaaattaccatccctaattttgcttttcctagtagtgtaa 18844541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 317
Target Start/End: Complemental strand, 21219388 - 21219240
Alignment:
Q  169 aaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattt 266  Q
    |||| ||||||||||||||| |||||||  || |||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||  |||| |||||    
T  21219388 aaaatcaaaaattagtgagggaaatttac-ga-ggaatacgtgaaatccctctctaattccatcactaaattttgcgaccaaaaaatttatgagtaattt 21219291  T
Q  267 tgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
      |||||||||| ||||||||| ||| || |  ||  ||||||||||||||    
T  21219290 cattttttccgtcactaatttctctcgctgatttttctttttctagtagtg 21219240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 31399638 - 31399508
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || |||||||||||||||| |||||||||||||||||||||||||||||||  |||||  |||| |||||  |||||| | | |||||||    
T  31399638 aaaaattagtgagggaaaacgtgaaatccatctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcatttttttcatcactaatt 31399539  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    ||||||  |||  ||||||||||||||||||    
T  31399538 tccctcgttaattttgttttttctagtagtg 31399508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 24636660 - 24636764
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| ||||||||||||||||||||||||||||||||||| |||  ||||  |||| |||||  |||||||||| ||||||||    
T  24636660 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaattt 24636759  T
Q  288 ccctc 292  Q
    |||||    
T  24636760 ccctc 24636764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 25273457 - 25273328
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgaga-aattttgttttttccgttactaattt 287  Q
    |||| |||| || ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||  | |||  ||||| ||| ||||||||    
T  25273457 aaaaattagtgagggaaaacgtaaaatccctctctaattctgtcactaaattttgcgaccaaagaatttgtgaggactttcattttttcgtcactaattt 25273358  T
Q  288 ccctccctaaacttgttttttctagtagtg 317  Q
    |||||  |||  ||| ||||||||||||||    
T  25273357 ccctcgttaattttgctttttctagtagtg 25273328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 318
Target Start/End: Complemental strand, 13061061 - 13060930
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||| ||||||||||||||||||| |||||||||||||||||| || |||||  |||| |||||  |||||||||| |||||||    
T  13061061 aaaaattagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatt 13060962  T
Q  287 tccctccctaaacttgttttttctagtagtgt 318  Q
    | |||| ||||  ||| |||| ||||||||||    
T  13060961 tacctcgctaattttgcttttgctagtagtgt 13060930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 24479949 - 24479874
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttg 243  Q
    |||||||||||||||||||| |  ||||||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  24479949 aaaaagcaaaaattagtgagaattatttagagaaggaaaacgtgaaattcctctctaattctgtcactaaattttg 24479874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 204 - 319
Target Start/End: Original strand, 10917849 - 10917966
Alignment:
Q  204 aaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaactt 301  Q
    ||||| || |||||||||||||||||||||||||||||||| | |||  ||||  |||| |||||| | |||||||| || |||||||||||||||  ||    
T  10917849 aaaacatgcaatccctctctaattccgtcactaaattttgcaatcaagaaatttatgaggaattttatgttttccgtcacaaatttccctccctaatttt 10917948  T
Q  302 gttttttctagtagtgta 319  Q
    | ||||||||||||||||    
T  10917949 gctttttctagtagtgta 10917966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 317
Target Start/End: Complemental strand, 25000560 - 25000431
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| | ||||||||||||||||||||| ||||| |||||| || |||||  |||| |||||  |||||||||| ||||||||    
T  25000560 aaatttagtgagggaaaacgtaacatccctctctaattccgtcacaaaattctgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 25000461  T
Q  288 ccctccctaaacttgttttttctagtagtg 317  Q
    ||||| ||||  ||  ||||||||||||||    
T  25000460 ccctcactaattttactttttctagtagtg 25000431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 212 - 317
Target Start/End: Original strand, 8824855 - 8824962
Alignment:
Q  212 aaatccctctctaattccgtcactaaattttgcgaccaaagaa--tttgagaaattttgttttttccgttactaatttccctccctaaacttgttttttc 309  Q
    |||||||||||||||||||||||||||||||||||| || |||  | |||| |||||  |||||||| | ||||||||||||| ||||  ||| ||||||    
T  8824855 aaatccctctctaattccgtcactaaattttgcgactaaggaatctgtgaggaatttgattttttccatcactaatttccctcgctaattttgctttttc 8824954  T
Q  310 tagtagtg 317  Q
    ||||||||    
T  8824955 tagtagtg 8824962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 284
Target Start/End: Complemental strand, 19493762 - 19493688
Alignment:
Q  212 aaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaa 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||| |||||  |||||||||| |||||    
T  19493762 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaa 19493688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 202 - 320
Target Start/End: Complemental strand, 33413087 - 33412974
Alignment:
Q  202 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaac 299  Q
    ||||||||| ||||||||||||||||||||||||||||||||||      |||||  |||| |||||  |||||||||||||||||||||||| || ||     
T  33413087 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcg------gaatttgtgaggaatttcattttttccgttactaatttccctcgct-aat 33412995  T
Q  300 ttgttttttctagtagtgtaa 320  Q
    ||  |||||||||||||||||    
T  33412994 tttctttttctagtagtgtaa 33412974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 215 - 317
Target Start/End: Original strand, 8789873 - 8789977
Alignment:
Q  215 tccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctag 312  Q
    |||||||||||||||||||||||||||||||||||| |||||  |||| |||||| | ||||| || || ||||| |||||||||  ||| |||| ||||    
T  8789873 tccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttcagtcacaaattttcctccctaattttgcttttcctag 8789972  T
Q  313 tagtg 317  Q
    |||||    
T  8789973 tagtg 8789977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 258
Target Start/End: Complemental strand, 3692330 - 3692232
Alignment:
Q  161 cactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    ||||||||||||  ||||||||||||||| ||||||| ||| | ||||||| |||||| ||||||||||| | ||||||||||  ||| ||||||||||    
T  3692330 cactactaaaaatacaaaaattagtgagggaaatttatagaggtaaaacgtaaaatccttctctaattccattactaaattttatgactaaagaatttg 3692232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 321
Target Start/End: Original strand, 17003262 - 17003403
Alignment:
Q  182 agtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgtt 279  Q
    |||||| |||||||||||| ||||||||| ||||  ||||||||| | |||| ||||||||| || ||| |||||  ||||   |||| ||||||||       
T  17003262 agtgagaaaaatttagagagggaaaacgtaaaattgctctctaatacagtcattaaattttgtgatcaaggaatttatgaggggttttattttttcccac 17003361  T
Q  280 actaatttccctccctaaacttgttttttctagtagtgtaat 321  Q
    |||||||| |||||||||  ||| ||||||||||||||||||    
T  17003362 actaattttcctccctaattttgctttttctagtagtgtaat 17003403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 317
Target Start/End: Original strand, 25274654 - 25274734
Alignment:
Q  239 ttttgcgaccaaagaatttg--agaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||||||||||| |||||||  ||||||||  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  25274654 ttttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 25274734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 25651071 - 25651133
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaa 237  Q
    |||||||||||||| || ||||| || ||||||||| || || ||||||||||||||||||||    
T  25651071 aaaaattagtgagggaagtttagtgaaggaaaacgtaaagtctctctctaattccgtcactaa 25651133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 29473442 - 29473376
Alignment:
Q  177 aaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttg 243  Q
    |||||| ||||| |||| |||| | |||||||||||||||| ||||| ||||||| |||||||||||    
T  29473442 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgttactaaattttg 29473376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 288
Target Start/End: Complemental strand, 2265474 - 2265407
Alignment:
Q  223 taattccgtcactaaattttgcgaccaaagaatttgagaa--attttgttttttccgttactaatttc 288  Q
    |||||| |||||||||||||| || ||||||||||| |||  ||||| |||||||||| |||||||||    
T  2265474 taattctgtcactaaattttgtgatcaaagaatttgtgaaggattttattttttccgtcactaatttc 2265407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 258
Target Start/End: Original strand, 15289679 - 15289718
Alignment:
Q  219 tctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  15289679 tctctaattccatcactaaattttacgaccaaagaatttg 15289718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 258
Target Start/End: Original strand, 15470048 - 15470087
Alignment:
Q  219 tctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  15470048 tctctaattccatcactaaattttacgaccaaagaatttg 15470087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 6103919 - 6103846
Alignment:
Q  156 tataacactactaaaa-agcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattc 228  Q
    |||||| ||||||||| | |||| |||||||||| ||||||||||| | ||||| ||||||  |||||||||||    
T  6103919 tataaccctactaaaataacaaatattagtgagggaaatttagagaggaaaaacatgaaatttctctctaattc 6103846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 6263036 - 6263096
Alignment:
Q  177 aaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaa 237  Q
    |||||||| ||||||||||||| | | |||||||| ||| | |||||||||| ||||||||    
T  6263036 aaattagtaaggaaaatttagataggaaaaacgtgtaattcttctctaattctgtcactaa 6263096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 160 - 317
Target Start/End: Original strand, 27449063 - 27449223
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||      
T  27449063 acactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 27449162  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| |||||  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  27449163 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 27449223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 18104689 - 18104529
Alignment:
Q  160 acactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--t 257  Q
    ||||||||||||| ||||||||||||||| |||||| | || ||||||| ||||||||||||||||||||||||||||||||||||||||  |||||  |    
T  18104689 acactactaaaaaacaaaaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgt 18104590  T
Q  258 gagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    ||| |||||  |||||||||| | ||||||||||| ||||  ||| |||||||||||||||    
T  18104589 gaggaatttaattttttccgtcaataatttccctcgctaattttgctttttctagtagtgt 18104529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 156 - 318
Target Start/End: Complemental strand, 19270026 - 19269863
Alignment:
Q  156 tataacactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaat 255  Q
    ||||| ||||||||||| ||||||||||||||| |||||||| || ||||||||| |||||||||| |||||||||||||||||||||||||||| ||||    
T  19270026 tataaaactactaaaaa-caaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaat 19269928  T
Q  256 t--tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |  |||| |||||  |||||||||| ||||||||||||| ||||  ||| |||||||| ||||||    
T  19269927 ttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctaatagtgt 19269863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 11219122 - 11219273
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| |||| ||||||||||||||||| | || |||||||||||||||||||||||||||||||| ||||||||||||| |  |||||  |||||||||    
T  11219122 aaaaaacaaatattagtgaggaaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgagaaatt 11219221  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||||||||||||| ||||  ||||||||||||||||||    
T  11219222 tcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 11219273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 168 - 297
Target Start/End: Complemental strand, 23217359 - 23217228
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||  |||| ||||    
T  23217359 aaaaagcaaaaattggtgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgggaccatagaatttgtgaggaatt 23217260  T
Q  266 ttgttttttccgttactaatttccctccctaa 297  Q
    |  |||||||| | | ||||||||||||||||    
T  23217259 tgattttttccctcattaatttccctccctaa 23217228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 159 - 317
Target Start/End: Complemental strand, 7623692 - 7623531
Alignment:
Q  159 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaa--t 255  Q
    ||||||||||||||  ||||||||||||||| |||||| | || |||||| ||||||||||||||||||||||||||||||||||||||||||||||  |    
T  7623692 aacactactaaaaaatcaaaaattagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatct 7623593  T
Q  256 ttgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
     ||||||||||  |||||||||| ||||||||||||| || |  ||  ||||||||||||||    
T  7623592 gtgagaaatttcattttttccgtcactaatttccctcgctgatttttctttttctagtagtg 7623531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 30219313 - 30219474
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||||| || | ||||| |||||||||||||||||||||||||||||||||||||||||| ||||      
T  30219313 acactactaaaaaaacaaaaattagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaattta 30219412  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||| |||||| | |||||||| || |||||||||||||||  ||| |||| ||||||||||    
T  30219413 tgaggaattttatgttttccgtcacaaatttccctccctaattttgcttttcctagtagtgt 30219474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 25882546 - 25882706
Alignment:
Q  160 acactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--t 257  Q
    |||||||||||||   ||||||||||||| | |||||| || ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||  |    
T  25882546 acactactaaaaaaacaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaagaatttgt 25882645  T
Q  258 gagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    ||| |||||  |||||||||| ||||||||||||| ||||  ||| |||||||| ||||||    
T  25882646 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctaatagtgt 25882706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 160 - 314
Target Start/End: Original strand, 1628190 - 1628347
Alignment:
Q  160 acactactaaaaa-gcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    ||||||||||||| | |||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||| || |||||      
T  1628190 acactactaaaaaagtaaaaattagtgagggaaatttagagagggaaaacgtgaaatccctctctaatttcgtcactaaattttacgactaaggaattta 1628289  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagta 314  Q
    |||| |||||| |||||||| | | ||||||||||||||||  ||  |||||||||||    
T  1628290 tgaggaattttattttttccatcattaatttccctccctaattttactttttctagta 1628347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 160 - 297
Target Start/End: Complemental strand, 26830602 - 26830461
Alignment:
Q  160 acactactaaaaa-gcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    ||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||  |||||      
T  26830602 acactactaaaaaagcaaaaattagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcacaaaattttgcgaccatggaatttg 26830503  T
Q  257 tgagaaatttt-gttttttccgttactaatttccctccctaa 297  Q
    |||| ||||||  |||||||||| | |||||| |||||||||    
T  26830502 tgaggaattttatttttttccgtcattaattttcctccctaa 26830461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 168 - 318
Target Start/End: Original strand, 8110323 - 8110475
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||||| || ||||||||| |||| ||||||||||||||||| |||||||| ||||||| |||||  |||| ||||    
T  8110323 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcattaaattttccgaccaaggaatttgtgaggaatt 8110422  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |  |||||||||| ||||||||||||| ||||  ||| |||||||||||||||    
T  8110423 tcattttttccgtcactaatttccctcactaattttgctttttctagtagtgt 8110475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 175 - 317
Target Start/End: Complemental strand, 11007827 - 11007683
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgaga--aattttgtttt 272  Q
    |||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||  |||||| ||  |||||  ||||    
T  11007827 aaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgacgaatttcatttt 11007728  T
Q  273 ttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||||| ||||||||||||  ||||  ||| ||||||||||||||    
T  11007727 ttccgtcactaatttcccttactaattttgctttttctagtagtg 11007683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 168 - 318
Target Start/End: Complemental strand, 11085493 - 11085341
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||  |||||||| || |||||  ||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||    
T  11085493 aaaaaacaaaaattagtgagagaaatttagtgagggaaattgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttatgaggaatt 11085394  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |  |||||||||||||| ||||| ||| ||||  ||  |||||||||||||||    
T  11085393 tcattttttccgttactgatttctctcgctaattttactttttctagtagtgt 11085341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 5260933 - 5261072
Alignment:
Q  180 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccg 277  Q
    ||||||||| |||| ||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||  |||||||||    
T  5260933 ttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 5261032  T
Q  278 ttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    | ||||||||||||| ||||  ||| ||||||||||||||    
T  5261033 tcactaatttccctcactaattttgctttttctagtagtg 5261072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 8428155 - 8428306
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||  |||| ||||    
T  8428155 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatt 8428254  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||||||||||||| ||||  || |||||||||||||||    
T  8428255 tcattttttccgtcactaatttccctcgctaattttattttttctagtagtg 8428306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 16299845 - 16299996
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  |||| ||||    
T  16299845 aaaaaacaaaaattagtgagggaaatttggtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatt 16299944  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || | |||||||| || |||||| ||||||||  ||| |||| |||||||||    
T  16299945 ttatgttttccgtcacaaatttcgctccctaattttgcttttcctagtagtg 16299996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 17762626 - 17762777
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||| |||||||||||||||||||||||||| |||||| |||||  |||| ||||    
T  17762626 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatt 17762725  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||||||||||||| ||||  ||||| ||||||||||||    
T  17762726 tcattttttccgtcactaatttccctcgctaattttgttctttctagtagtg 17762777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 18091698 - 18091547
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| | |||||||||||||||||||||||||||||||||||||||| ||||  |||| ||||    
T  18091698 aaaaaacaaaaattagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatt 18091599  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||||||||||||| ||||  ||| ||||| ||||||||    
T  18091598 tcattttttccgtcactaatttccctcgctaattttgctttttttagtagtg 18091547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 19063946 - 19064097
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||| |||||||||||||||||||||||||| |||||| |||||  |||| ||||    
T  19063946 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatt 19064045  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||||||||||||| ||||  ||||| ||||||||||||    
T  19064046 tcattttttccgtcactaatttccctcgctaattttgttctttctagtagtg 19064097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 175 - 292
Target Start/End: Original strand, 28389964 - 28390083
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    |||||||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||| |||||  ||||| ||||| ||||    
T  28389964 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccttctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttatttt 28390063  T
Q  273 ttccgttactaatttccctc 292  Q
    |||||| |||||||| ||||    
T  28390064 ttccgtcactaattttcctc 28390083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 36543733 - 36543884
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaa--tttgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||  | ||||| |||    
T  36543733 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatctgtgagagatt 36543832  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || |||||||| | |||||||| |||||||||  ||  ||||||||||||||    
T  36543833 ttattttttccatcactaattttcctccctaatttttctttttctagtagtg 36543884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 189 - 321
Target Start/End: Original strand, 13921330 - 13921464
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    ||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||  |||||||||| |||||||    
T  13921330 aaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 13921429  T
Q  287 tccctccctaaacttgttttttctagtagtgtaat 321  Q
    | |||| ||||  ||| ||||||||||||||||||    
T  13921430 ttcctcgctaattttgctttttctagtagtgtaat 13921464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 159 - 310
Target Start/End: Original strand, 18539778 - 18539932
Alignment:
Q  159 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca--aagaat 255  Q
    ||||||||||||||  ||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||  ||   |    
T  18539778 aacactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaattt 18539877  T
Q  256 ttgagaaattttgttttttccgttactaatttccctccctaaacttgttttttct 310  Q
    ||||| |||||  |||||||||| ||||||||||||| ||||  ||| |||||||    
T  18539878 ttgaggaatttcattttttccgtcactaatttccctctctaattttgctttttct 18539932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 181 - 317
Target Start/End: Original strand, 19610335 - 19610473
Alignment:
Q  181 tagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgt 278  Q
    |||||||| |||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||| | ||||||||    
T  19610335 tagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgt 19610434  T
Q  279 tactaatttccctccctaaacttgttttttctagtagtg 317  Q
     || |||||||||||||||  ||| |||| |||||||||    
T  19610435 cacaaatttccctccctaattttgcttttcctagtagtg 19610473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 4393501 - 4393348
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||||||||||||||||    ||||  |||||||||    
T  4393501 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatt 4393402  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||||||| ||||||||||||| ||||  ||| ||||||| | ||||||    
T  4393401 tcattttttccgtcactaatttccctcactaattttgctttttctggcagtgta 4393348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 9652553 - 9652714
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||||||||||||||| |   ||||      
T  9652553 acactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttg 9652652  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||| |||||  |||||||||| ||||||||||||| | ||  ||| |||||||||||||||    
T  9652653 tgaggaatttcattttttccgtcactaatttccctcgccaattttgctttttctagtagtgt 9652714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 168 - 287
Target Start/End: Complemental strand, 17582452 - 17582331
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||  |||||  |||| ||||    
T  17582452 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatt 17582353  T
Q  266 ttgttttttccgttactaattt 287  Q
    || |||||||||| ||||||||    
T  17582352 ttattttttccgtcactaattt 17582331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 161 - 316
Target Start/End: Original strand, 27968892 - 27969049
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaa--tttg 258  Q
    |||||||||||| ||||||||||||| | |||||||| || ||||||| ||||||||||||||||||| |||| ||||||||||||||||  ||  | ||    
T  27968892 cactactaaaaaacaaaaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcattaaattttgcgaccaacaaaggtgtg 27968991  T
Q  259 agaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagt 316  Q
    ||| ||||| ||| |||||| |||||||||||||||| |  ||| |||||||||||||    
T  27968992 agagattttatttgttccgtcactaatttccctccctgattttgctttttctagtagt 27969049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 31433721 - 31433846
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||||||||||||||||||| || |||||| | |||||||||||||| |||||||||||||||||||||||||| ||||||| |||||  |||||||||    
T  31433721 aaaaagcaaaaattagtgagggaattttagaaagggaaaacgtgaaattcctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaatt 31433820  T
Q  266 ttgttttttccgttactaatttccct 291  Q
    || |||||||  | ||||||||||||    
T  31433821 ttattttttctatcactaatttccct 31433846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 190 - 317
Target Start/End: Original strand, 48404866 - 48404995
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||  |||||||||| ||||||||    
T  48404866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 48404965  T
Q  288 ccctccctaaacttgttttttctagtagtg 317  Q
    ||||| ||||  ||| ||||||||||||||    
T  48404966 ccctcgctaattttgctttttctagtagtg 48404995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 174 - 316
Target Start/End: Original strand, 11915748 - 11915892
Alignment:
Q  174 caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttt 271  Q
    ||||| ||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||  ||||  |||| |||||  | |    
T  11915748 caaaatttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatat 11915847  T
Q  272 tttccgttactaatttccctccctaaacttgttttttctagtagt 316  Q
    ||||||| ||||||||||||| ||||  ||| |||||||||||||    
T  11915848 tttccgtcactaatttccctcgctaattttgctttttctagtagt 11915892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 168 - 319
Target Start/End: Original strand, 46942471 - 46942624
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaa-agaatt-tgagaaatt 265  Q
    |||||||||||| | |||||| || |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||  |||    
T  46942471 aaaaagcaaaaaattgtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatt 46942570  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  ||||||| || |||||||||| |||||||  ||| ||||||||||||||||    
T  46942571 taattttttctgtcactaatttccttccctaattttgatttttctagtagtgta 46942624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 181 - 318
Target Start/End: Complemental strand, 1311097 - 1310958
Alignment:
Q  181 tagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgt 278  Q
    |||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  |||| | |||  ||||||||||    
T  1311097 tagtgagggaaatttagtgatggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggattttcattttttccgt 1310998  T
Q  279 tactaatttccctccctaaacttgttttttctagtagtgt 318  Q
     |||||||| |||  ||||  ||| |||||||||||||||    
T  1310997 cactaattttccttgctaattttgctttttctagtagtgt 1310958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 161 - 317
Target Start/End: Original strand, 21020041 - 21020200
Alignment:
Q  161 cactactaaa-aagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--t 257  Q
    |||||||||| || |||||||||||||||  | ||||| || ||||||| | |||||| |||||||||||||||||||||||||| ||||| |||||  |    
T  21020041 cactactaaataaacaaaaattagtgagggcagtttagtgagggaaaacataaaatccttctctaattccgtcactaaattttgcaaccaaggaatttgt 21020140  T
Q  258 gagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| ||||| |||||||||| ||||||||||||||||||  ||| |||| |||||||||    
T  21020141 gagagattttattttttccgtcactaatttccctccctaattttgcttttcctagtagtg 21020200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 29215976 - 29216127
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||||| || ||||||| |||||||||||||||||||| |||||||||||||||||||| |||||  |||| ||||    
T  29215976 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatt 29216075  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || | |||||||| || ||||| ||||| |||  ||| |||| |||||||||    
T  29216076 ttatgttttccgtcacaaattttcctccataattttgcttttcctagtagtg 29216127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 189 - 319
Target Start/End: Original strand, 21088757 - 21088887
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgagaaattttgttttttccgttactaatttc 288  Q
    ||||||||| || ||||||| ||||||||||||| ||||||||||  ||||||||||||||| ||||||| || ||||| |||||||||| |||||||||    
T  21088757 aaaatttagtgagggaaaacatgaaatccctctcgaattccgtcatcaaattttgcgaccaaggaatttgtgagattttattttttccgtcactaatttc 21088856  T
Q  289 cctccctaaacttgttttttctagtagtgta 319  Q
    |||||||||  ||| ||||  ||||||||||    
T  21088857 cctccctaactttgcttttcttagtagtgta 21088887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 26390794 - 26390633
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| | |||| | || ||| ||| |||||||||||||||||||||||||||||||||| |||||| |||||      
T  26390794 acactactaaaaaaacaaaaattagtgagggatattttgtgagggataacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttg 26390695  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||| |||||  |||||||||| ||||||||| ||| ||||  ||| |||||||||||||||    
T  26390694 tgaggaatttcattttttccgtcactaatttctctcgctaattttgctttttctagtagtgt 26390633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 27212932 - 27212842
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    ||||| ||||||||||||||| ||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  27212932 aaaaaacaaaaattagtgagggaaatttagagaggaaaaacgtgaaatccctctttaattccgtcactaaattttgcgactaaagaatttg 27212842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 319
Target Start/End: Original strand, 5565727 - 5565859
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||||||||||||||||||||  |||||||||||||||||||||  ||||  ||||| ||||| |||||||||| |||||||    
T  5565727 aaaaattagtgagggaaaacgtgaaatccctctctaattatgtcactaaattttgcgaccaagaaatttgtgagagattttattttttccgtcactaatt 5565826  T
Q  287 tccctccctaaacttgttttttctagtagtgta 319  Q
    ||||||||| |  ||| ||||||||||||||||    
T  5565827 tccctccctgattttgctttttctagtagtgta 5565859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 19223445 - 19223584
Alignment:
Q  180 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccg 277  Q
    ||||||||| |||||||| |  ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||  |||| |||||  |||||||||    
T  19223445 ttagtgagggaaatttagtgggggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccg 19223544  T
Q  278 ttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    | || |||||||||| ||||  ||| ||||||||||||||    
T  19223545 tcaccaatttccctcgctaattttgctttttctagtagtg 19223584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 161 - 293
Target Start/End: Complemental strand, 20615502 - 20615367
Alignment:
Q  161 cactactaaa-aagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--t 257  Q
    |||||||||| || ||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||| |||||||| |||||||| ||||  |    
T  20615502 cactactaaagaaacaaaaattagtgagggaaatttagagaaggaaaacgtgaaattcctctctaattctgtcattaaattttacgaccaaaaaatttgt 20615403  T
Q  258 gagaaattttgttttttccgttactaatttccctcc 293  Q
    |||| ||||| ||||||||||  ||||||| |||||    
T  20615402 gagatattttattttttccgtctctaattttcctcc 20615367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 190 - 317
Target Start/End: Original strand, 29236050 - 29236179
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt---tgagaaattttgttttttccgttactaatt 286  Q
    |||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||   ||||||||||  |||||||||| |||||||    
T  29236050 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgacc-aagaattttgtgagaaatttcattttttccgtcactaatt 29236148  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    |||||| ||||  ||| |||||||| |||||    
T  29236149 tccctcgctaattttgctttttctaatagtg 29236179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 31250072 - 31250223
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg--agaaatt 265  Q
    |||||| ||||||| |||||| ||||||||||| |||||||   ||||||||||||||||| |||||||||||||||||||||  ||||||  || ||||    
T  31250072 aaaaagaaaaaatttgtgagggaaatttagagagggaaaacacaaaatccctctctaattctgtcactaaattttgcgaccaagaaatttgtaaggaatt 31250171  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || |||||||||| |||||| | |||||||||  |||  |||||||||||||    
T  31250172 ttattttttccgtcactaatcttcctccctaattttgcattttctagtagtg 31250223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 189 - 317
Target Start/End: Original strand, 23773482 - 23773612
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||  ||| |||||| |||||||    
T  23773482 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttcttccgtcactaatt 23773581  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    |||||  ||||  ||||||||||||||||||    
T  23773582 tcccttactaattttgttttttctagtagtg 23773612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 189 - 317
Target Start/End: Original strand, 26098818 - 26098948
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||  |||||||| | |||||||    
T  26098818 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccatcactaatt 26098917  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    |||||| ||||  ||| ||||||||||||||    
T  26098918 tccctcgctaattttgctttttctagtagtg 26098948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 190 - 317
Target Start/End: Original strand, 21816727 - 21816856
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| |||| |||||||||||||||||||||||||||||||||| |||||  |||| |||||  |||||||||| ||||||||    
T  21816727 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 21816826  T
Q  288 ccctccctaaacttgttttttctagtagtg 317  Q
    ||||| ||||  ||  ||||||||||||||    
T  21816827 ccctcgctaatttttctttttctagtagtg 21816856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 176 - 317
Target Start/End: Complemental strand, 11837357 - 11837214
Alignment:
Q  176 aaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttt 273  Q
    ||||||| ||||| | | |||| || ||||||| |||||| |||||||||||||||||||||||||| |||||||||||||  |||| |||||  |||||    
T  11837357 aaaattaatgagggatacttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttt 11837258  T
Q  274 tccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    ||| | || |||||||||| ||||  ||||||||||||||||||    
T  11837257 tccatcacgaatttccctcgctaattttgttttttctagtagtg 11837214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 189 - 318
Target Start/End: Complemental strand, 13905168 - 13905037
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| |||||||||||||||||||||||||||||||||||||||  ||||  |||| |||||  |||||||||| |||||||    
T  13905168 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatt 13905069  T
Q  287 tccctccctaaacttgttttttctagtagtgt 318  Q
    || ||| ||||  ||| |||||||||||||||    
T  13905068 tcgctctctaattttgctttttctagtagtgt 13905037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 189 - 318
Target Start/End: Complemental strand, 15064122 - 15063991
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||  |||| |||||| | |||||||| || ||||    
T  15064122 aaaaattagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatt 15064023  T
Q  287 tccctccctaaacttgttttttctagtagtgt 318  Q
    |||||||||||  ||| |||| ||||||||||    
T  15064022 tccctccctaattttgcttttcctagtagtgt 15063991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 168 - 297
Target Start/End: Complemental strand, 29704183 - 29704052
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | ||  ||||||||||||||||||| |||||||||||||||||||||||| || | ||||  |||| ||||    
T  29704183 aaaaaacaaaaattagtgagggaaattttgtgagagaaaacgtgaaatccctctttaattccgtcactaaattttgcgatcataaaatttgtgaggaatt 29704084  T
Q  266 ttgttttttccgttactaatttccctccctaa 297  Q
    |  |||||||||| ||||||||||||| ||||    
T  29704083 tcattttttccgtcactaatttccctcgctaa 29704052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 29956356 - 29956507
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||| ||||| |||||| | || |||||| ||||||||||| |||||||||||||||||||||||||||||  |||||  |||| ||||    
T  29956356 aaaaaacaaaaattaatgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatt 29956455  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||| | ||||||||||||| ||||  ||  ||||||||||||||    
T  29956456 tcattttttccatcactaatttccctcgctaattttactttttctagtagtg 29956507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 30005511 - 30005662
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||| ||||| |||||| | || |||||| ||||||||||| |||||||||||||||||||||||||||||  |||||  |||| ||||    
T  30005511 aaaaaacaaaaattaatgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatt 30005610  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||| | ||||||||||||| ||||  ||  ||||||||||||||    
T  30005611 tcattttttccatcactaatttccctcgctaattttactttttctagtagtg 30005662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 36564590 - 36564439
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg--agaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || ||||| | |||||||||||||||||| |||||||||||| |||||||||||||| ||  ||  |||    
T  36564590 aaaaaacaaaaattagtgagggaaattttgtgagggaaagcatgaaatccctctctaatttcgtcactaaattctgcgaccaaagaatctgtcagggatt 36564491  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || |||||||| | |||||||| |||||||||  ||  ||||||||||||||    
T  36564490 ttattttttccatcactaattttcctccctaatttttctttttctagtagtg 36564439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 21490164 - 21490034
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || |||||| || ||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||  |||||||||| | | |||    
T  21490164 aaaaattagtgagggaaaatgtaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcattgatt 21490065  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    |||||| ||||  ||||||||||||||||||    
T  21490064 tccctcactaattttgttttttctagtagtg 21490034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 49915435 - 49915514
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgac 247  Q
    ||||| ||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||    
T  49915435 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgac 49915514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 202 - 317
Target Start/End: Complemental strand, 10941782 - 10941665
Alignment:
Q  202 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaac 299  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||| |||||  |||| |||||  |||||||||| ||||||||||||  ||||      
T  10941782 ggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcccttactaatt 10941683  T
Q  300 ttgttttttctagtagtg 317  Q
    ||| ||||||||||||||    
T  10941682 ttgctttttctagtagtg 10941665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 19545506 - 19545615
Alignment:
Q  180 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccg 277  Q
    ||||||||| |||||||| || | ||||||| ||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||  |||||||||    
T  19545506 ttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 19545605  T
Q  278 ttactaattt 287  Q
    | ||||||||    
T  19545606 tcactaattt 19545615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 8543446 - 8543534
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 249  Q
    ||||||||| ||  |||||||||||||| |||||| | || |||||||||||||||||||||||||||||||| |||||||||||||||    
T  8543446 cactactaataaaaaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgacca 8543534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 43329893 - 43329763
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || |||||| || |||||| |||||||||||||||||||||||| ||||||| |||||  |||| |||||  |||||||||| |||||||    
T  43329893 aaaaattagtgagggaaaatgtaaaatccttctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 43329794  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    |||||| ||||  ||| ||||||||||||||    
T  43329793 tccctcgctaattttgctttttctagtagtg 43329763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 46012858 - 46012728
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||| ||||||||||||||||||  ||||||||||||||||| ||| |||||  ||||| ||||| |||||||||| |||||||    
T  46012858 aaaaattagtgagggaaaacatgaaatccctctctaattttgtcactaaattttgcgatcaaggaatttgtgagagattttattttttccgtcactaatt 46012759  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    | ||||||| |  ||| ||||||||||||||    
T  46012758 ttcctccctgattttgctttttctagtagtg 46012728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 204 - 319
Target Start/End: Original strand, 8546265 - 8546382
Alignment:
Q  204 aaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaactt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  |||||  |||| |||||  |||||||||| |||||||| |||| ||||  ||    
T  8546265 aaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatttt 8546364  T
Q  302 gttttttctagtagtgta 319  Q
    | ||||||| ||||||||    
T  8546365 gctttttctggtagtgta 8546382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 317
Target Start/End: Original strand, 29451069 - 29451230
Alignment:
Q  160 acactactaaa-aagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    ||||||||||| || |||||||||| |||  |||||||| || ||||||||| ||||||||||||||||||||| | ||||||||| ||  | |||||      
T  29451069 acactactaaataaacaaaaattagcgagagaaatttagtgagggaaaacgtaaaatccctctctaattccgtcccaaaattttgcaactgaggaattta 29451168  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttg-ttttttctagtagtg 317  Q
    ||||||||||  |||||||||| |||||||||||||  |||  ||| |||||||||||||||    
T  29451169 tgagaaatttcattttttccgtcactaatttccctcgttaattttgtttttttctagtagtg 29451230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 1745617 - 1745488
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgaga-aattttgttttttccgttactaattt 287  Q
    |||| |||| || ||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| ||  | |||  ||||||||| ||||||||    
T  1745617 aaaaattagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttccgtcactaattt 1745518  T
Q  288 ccctccctaaacttgttttttctagtagtg 317  Q
    ||||| ||||  ||| ||||| ||||||||    
T  1745517 ccctcgctaattttgctttttttagtagtg 1745488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 317
Target Start/End: Original strand, 15490026 - 15490169
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    |||||||||||||| |||||||| ||  ||||||||||||||||||| |||||  |||||||||||||||||||||| ||||  ||||| ||||| ||||    
T  15490026 aaaaattagtgagggaaatttagtgagagaaaacgtgaaatccctctttaatt-tgtcactaaattttgcgaccaaaaaatttgtgagagattttatttt 15490124  T
Q  273 ttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || ||| ||||||||  |||||| |  ||| ||||| ||||||||    
T  15490125 tttcgtcactaatttttctccctgattttgctttttttagtagtg 15490169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 18380008 - 18380159
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgaga--aatt 265  Q
    ||||| ||||||||||||||| |||||||  || |||||| || |||||||||| |||||||||||||||||||| ||| |||  |||||| ||  ||||    
T  18380008 aaaaaacaaaaattagtgagggaaatttaatgagggaaaatgtaaaatccctctttaattccgtcactaaattttacgatcaagaaatttgtgaagaatt 18380107  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||| ||||||||| ||||  ||  ||||||||||||||    
T  18380108 tcattttttccgtcactgatttccctcgctaattttactttttctagtagtg 18380159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 3461440 - 3461310
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| |||||||||||||||||||||| |||||||||||| |||  ||||  |||| |||||| ||||||| || |||||||    
T  3461440 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaattttattttttctgtcactaatt 3461341  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    ||| || ||||  ||| ||||||||||||||    
T  3461340 tccttcgctaattttgctttttctagtagtg 3461310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 297
Target Start/End: Original strand, 28859596 - 28859706
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    ||||||||| || | ||||||| ||||||||||||||||||||||||||||||||| ||||| |||||  |||| |||||  |||||||||| |||||||    
T  28859596 aaaatttagtgaggtaaaacgtaaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccgtcactaatt 28859695  T
Q  287 tccctccctaa 297  Q
    | |||| ||||    
T  28859696 ttcctcgctaa 28859706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 210 - 317
Target Start/End: Complemental strand, 17269713 - 17269604
Alignment:
Q  210 tgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaacttgttttt 307  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  |||| |||||| |||||||| |   |||||||| || ||||  ||| ||||    
T  17269713 tgaaatccctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaattttattttttccatcgttaatttccatcgctaattttgctttt 17269614  T
Q  308 tctagtagtg 317  Q
    ||||||||||    
T  17269613 tctagtagtg 17269604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 224 - 317
Target Start/End: Complemental strand, 20762045 - 20761950
Alignment:
Q  224 aattccgtcactaaattttgcgaccaaagaatttg--agaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    ||||| ||||||||||||||||||||| |||||||  ||| ||||| |||||||||| |||||||||||||||| |  ||| ||||||||||||||    
T  20762045 aattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccgtcactaatttccctccctgattttgctttttctagtagtg 20761950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 317
Target Start/End: Original strand, 5744421 - 5744551
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||| ||||||| |||||||||||||||||||||||||||||| || |||||  ||||  ||||| | |||||||| || ||||    
T  5744421 aaaaattagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaatt 5744520  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    | |||||||||  ||| |||| |||||||||    
T  5744521 ttcctccctaattttgcttttcctagtagtg 5744551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 317
Target Start/End: Original strand, 5781380 - 5781510
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||| ||||||| |||||||||||||||||||||||||||||| || |||||  ||||  ||||| | |||||||| || ||||    
T  5781380 aaaaattagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaatt 5781479  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    | |||||||||  ||| |||| |||||||||    
T  5781480 ttcctccctaattttgcttttcctagtagtg 5781510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 10803695 - 10803857
Alignment:
Q  160 acactacta-aaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    ||||||||| |||| | ||| |||| |||| |||||||| || ||||||||| |||| ||||| ||||||||||| ||||||||||||||||  ||||      
T  10803695 acactactataaaaactaaatttagcgagggaaatttagtgagggaaaacgtaaaattcctctttaattccgtcattaaattttgcgaccaagaaatttg 10803794  T
Q  257 tgagaaattt-tgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||| |||||   |||||||||| | ||||||||||||||||  | | |||||||||||||||    
T  10803795 tgaggaatttcatttttttccgtcattaatttccctccctaatttggctttttctagtagtgt 10803857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 274
Target Start/End: Original strand, 20088390 - 20088492
Alignment:
Q  174 caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttt 271  Q
    ||||||| ||||||  |||||||| || | ||||| |||||||| ||||||||||| ||||||||||||| ||||||||||||  ||||||||||| |||    
T  20088390 caaaaatcagtgagagaaatttagtgaggcaaaacatgaaatccttctctaattccatcactaaattttgtgaccaaagaatttatgagaaattttattt 20088489  T
Q  272 ttt 274  Q
    |||    
T  20088490 ttt 20088492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 27182807 - 27182656
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||| ||||||  |||||||| || |||||||  |||||| |||||||||| ||||||||||| ||| |||||| | |||  ||||  |||    
T  27182807 aaaaaacaaaaatgagtgagagaaatttagtgagggaaaacaagaaatctctctctaatttcgtcactaaatcttgtgaccaagggatttgtgagggatt 27182708  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    || ||||||  || ||||||||||||||||||  |||||||| |||||||||||    
T  27182707 ttatttttt--gtcactaatttccctccctaattttgtttttcctagtagtgta 27182656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 297
Target Start/End: Complemental strand, 50665766 - 50665656
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||| |||||||||||||||||| |||||||||||||||||| |||||||||  |||| |||||| | |||||||| |  ||||    
T  50665766 aaaaattagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgatcaaagaatttgtgaggaattttatgttttccgtcataaatt 50665667  T
Q  287 tccctccctaa 297  Q
    |||||| ||||    
T  50665666 tccctctctaa 50665656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 210 - 297
Target Start/End: Original strand, 37283549 - 37283638
Alignment:
Q  210 tgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaa 297  Q
    |||||||||||||||||||||||||||||||||  |||||| |||||  |||| |||||| | |||||||| || |||||||||||||||    
T  37283549 tgaaatccctctctaattccgtcactaaattttatgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctccctaa 37283638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 287
Target Start/End: Original strand, 6718728 - 6718815
Alignment:
Q  202 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||   ||||  |||| |||||  |||||||||| ||||||||    
T  6718728 ggaaaacgtgaaatccctttctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 6718815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 6088358 - 6088228
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| |||||| ||||||||||||| | ||||||||| |||||| |||||  |||| |||||  |||||||||| |||||||    
T  6088358 aaaaattagtgagggaaaacgtaaaatccatctctaattccgttattaaattttgtgaccaaggaatttctgaggaatttcattttttccgtcactaatt 6088259  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    |||||  || |  ||| ||||||||||||||    
T  6088258 tcccttacttattttgctttttctagtagtg 6088228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 184 - 312
Target Start/End: Complemental strand, 26963384 - 26963254
Alignment:
Q  184 tgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg--agaaattttgttttttccgttac 281  Q
    ||||| |||||||| || |||||| || |||| ||||||||||||||| |||||||||| | ||||||| |||||  | ||||||  |||||| ||| ||    
T  26963384 tgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgttactaaattttacaaccaaagtatttgtaaaaaatttcattttttacgtcac 26963285  T
Q  282 taatttccctccctaaacttgttttttctag 312  Q
    |||||||||||  |||  |||||||||||||    
T  26963284 taatttccctcgttaattttgttttttctag 26963254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 23233293 - 23233224
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    |||| |||| || |||||||||||||| |||||| |||||| |||||||||||||||||||||| |||||    
T  23233293 aaaaattagtgagggaaaacgtgaaattcctctcaaattccttcactaaattttgcgaccaaagtatttg 23233224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 318
Target Start/End: Complemental strand, 6447344 - 6447245
Alignment:
Q  221 tctaattccgtcactaaattttgcgaccaaagaatttgaga--aattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||||||| ||||||||| |||| ||||||||||| || ||  |||||| |||||||| | ||||||||||||||||||  ||| |||| ||||||||||    
T  6447344 tctaattctgtcactaaactttgagaccaaagaatctgcgaggaattttattttttccatcactaatttccctccctaattttgcttttcctagtagtgt 6447245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 27711298 - 27711236
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaa 251  Q
    |||| |||| || ||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  27711298 aaaaattagcgacggaaaacatgaaatttctctctaattccgtcactaaattttgcgaccaaa 27711236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 10772184 - 10772115
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    ||||||||| || ||||||  |||||||||||||||||| ||||| ||||||||||||| ||| ||||||    
T  10772184 aaaatttagtgagggaaaatatgaaatccctctctaatttcgtcattaaattttgcgactaaaaaatttg 10772115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 35579654 - 35579605
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaat 239  Q
    |||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  35579654 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaat 35579605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 317
Target Start/End: Complemental strand, 47263394 - 47263265
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| ||||  || ||||| || ||||||||||||||||||||| |||||  |||| |||||  ||||||| || || |||||    
T  47263394 aaatttagtgagggaaaacgtaaaatttctatctaactctgtcactaaattttgcgaccaaggaatttgtgaggaatttaattttttctgtcaccaattt 47263295  T
Q  288 ccctccctaaacttgttttttctagtagtg 317  Q
    || ||  |||  ||| ||||||||||||||    
T  47263294 ccttcgttaattttgctttttctagtagtg 47263265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 13615427 - 13615476
Alignment:
Q  196 agagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcg 245  Q
    ||||| |||||||||||||| ||||||||||| | |||||||||||||||    
T  13615427 agagaaggaaaacgtgaaattcctctctaatttcatcactaaattttgcg 13615476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 287
Target Start/End: Original strand, 50240751 - 50240851
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||| ||| ||||||| ||||||||||  || ||||||||||||| |||| |||||  ||||| ||||| |||||||||| |||||||    
T  50240751 aaaaattagtgagggataacatgaaatctctctctaattatgttactaaattttgcgtccaaggaatttatgagagattttattttttccgtcactaatt 50240850  T
Q  287 t 287  Q
    |    
T  50240851 t 50240851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 10743156 - 10743207
Alignment:
Q  188 gaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaat 239  Q
    ||||||||||||||||||||| |||||| | ||||||||| ||||| |||||    
T  10743156 gaaaatttagagatggaaaacatgaaattcgtctctaatttcgtcattaaat 10743207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 30132391 - 30132330
Alignment:
Q  166 ctaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaatt 227  Q
    |||||||||||||||||   ||||||||| ||||||| ||||| | |||| |||||||||||    
T  30132391 ctaaaaagcaaaaattatctaggaaaattaagagatgaaaaacataaaattcctctctaatt 30132330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 160 - 317
Target Start/End: Original strand, 41637593 - 41637753
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  |||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||      
T  41637593 acactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttg 41637692  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| |||||| | |||||||| || |||||||||||||||  ||| ||||||||||||||    
T  41637693 tgaggaattttatgttttccgtcacaaatttccctccctaattttgctttttctagtagtg 41637753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 161 - 317
Target Start/End: Original strand, 8430273 - 8430431
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tg 258  Q
    |||||||||||| ||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||| ||| || | ||||  ||    
T  8430273 cactactaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgatcataaaatttgtg 8430372  T
Q  259 agaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || |||||| |||||||||| ||||||||||| | ||||  ||||||||||||||||||    
T  8430373 aggaattttattttttccgtcactaatttcccccgctaattttgttttttctagtagtg 8430431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 158 - 320
Target Start/End: Complemental strand, 13788217 - 13788052
Alignment:
Q  158 taacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt 256  Q
    |||||||||||||||  |||||||||||||||||||||||| || |||||| || |||||||||||||||| |||||||||||||||||||||| |||||    
T  13788217 taacactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatt 13788118  T
Q  257 --tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgtaa 320  Q
      |||| |||||  |||||||||| ||| ||||||||| ||||  ||| |||||||||||||||||    
T  13788117 tgtgaggaatttcattttttccgtcactgatttccctcgctaattttgctttttctagtagtgtaa 13788052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 21293862 - 21293711
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||| ||||||  |||||  |||||||||    
T  21293862 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttacgaccatggaatttgtgagaaatt 21293763  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||||||||||||| ||||  ||||||||||||||||||    
T  21293762 tcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 21293711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 162 - 316
Target Start/End: Complemental strand, 23388535 - 23388379
Alignment:
Q  162 actactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgaga 261  Q
    |||||||||||  |||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||   |||||| ||    
T  23388535 actactaaaaaataaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtga 23388436  T
Q  262 --aattttgttttttccgttactaatttccctccctaaacttgttttttctagtagt 316  Q
      |||||  |||||||||| || |||||||||| ||||  |||||||||||||||||    
T  23388435 agaatttcattttttccgtcaccaatttccctcgctaattttgttttttctagtagt 23388379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 168 - 318
Target Start/End: Complemental strand, 28841493 - 28841341
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  |||| ||||    
T  28841493 aaaaaacaaaaattagtgagggatatttagtgtgggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatt 28841394  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |  |||||||||||||||||||||||| ||||  ||| |||| ||||||||||    
T  28841393 tcattttttccgttactaatttccctcgctaattttgcttttcctagtagtgt 28841341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 160 - 317
Target Start/End: Complemental strand, 29749563 - 29749403
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  |||||||||||||||||||||||| || ||||||| ||||||||||| |||||||||||||||||||||||||||||  ||||      
T  29749563 acactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatgaaatccctccctaattccgtcactaaattttgcgaccaagaaatttg 29749464  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| |||||| | |||||||| || ||||||||| |||||  ||| ||||||||||||||    
T  29749463 tgaggaattttatgttttccgtcacaaatttcccttcctaattttgctttttctagtagtg 29749403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 160 - 317
Target Start/End: Original strand, 32185807 - 32185967
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt- 257  Q
    |||||||||||||  ||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||| ||||||   |||||     
T  32185807 acactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttg 32185906  T
Q  258 -gagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
     ||| |||||  |||||||||| ||||||||||||| ||||  ||||||||||||||||||    
T  32185907 cgaggaatttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 32185967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 30783322 - 30783473
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  |||| ||||    
T  30783322 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaatgaatttgtgaggaatt 30783421  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || | |||||||| || ||||||||| |||||  ||| |||| |||||||||    
T  30783422 ttatgttttccgtcacaaatttcccttcctaattttgcttttcctagtagtg 30783473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 41736156 - 41736307
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| |||||||||||||||||||||||| || |||||| || |||||||||||||||| |||||||||||||||||| ||| |||||  |||| ||||    
T  41736156 aaaaaacaaaaattagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgatcaaggaatttgtgaggaatt 41736255  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  41736256 tcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 41736307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 159 - 322
Target Start/End: Complemental strand, 26687851 - 26687685
Alignment:
Q  159 aacactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||| ||||||||||||||  |||||||| || ||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||      
T  26687851 aacactactaaaaaacaaaaattagtgagcgaaatttagtgacggaaaacatgaaatccatctctaattccgtcactaaattttgcaaccaaggaatttg 26687752  T
Q  257 tgagaaatttt-gttttttccgttactaatttccctccctaaacttgttttttctagtagtgtaatg 322  Q
    |||||||||||  |||||||||| | |||||||||||| |||  ||| ||| |||||||||| ||||    
T  26687751 tgagaaattttatttttttccgtcattaatttccctccttaattttgctttatctagtagtgaaatg 26687685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 168 - 310
Target Start/End: Original strand, 32300435 - 32300579
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||  |||||  |||| ||||    
T  32300435 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatt 32300534  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttct 310  Q
    |  |||||||||| ||||||||||||| ||||  ||| |||||||    
T  32300535 tcattttttccgtcactaatttccctcgctaattttgctttttct 32300579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 22140515 - 22140364
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | ||  |||||||||||||||||||||||||||||||||||||||||||||||  |||||  |||| ||||    
T  22140515 aaaaaacaaaaattagtgagggaaattttgtgaaagaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatt 22140416  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| |||||||||||||  |||  ||| ||||||||||||||    
T  22140415 tcattttttccgtcactaatttccctcgttaattttgctttttctagtagtg 22140364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 297
Target Start/End: Original strand, 31266338 - 31266469
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  |||| ||||    
T  31266338 aaaaatcaaaaattagtgagggaaatttagcgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatt 31266437  T
Q  266 ttgttttttccgttactaatttccctccctaa 297  Q
    || | |||||||| |  |||||||||||||||    
T  31266438 ttatgttttccgtaaaaaatttccctccctaa 31266469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 40018776 - 40018937
Alignment:
Q  159 aacactactaaaaagc-aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 257  Q
    |||||||||||||| | |||||||||||| |||||||||| || ||||||| ||||||| |||||||||||  ||||| |||||||| ||||| ||||||    
T  40018776 aacactactaaaaaaccaaaaattagtgacgaaaatttagtgagggaaaacatgaaatctctctctaattctctcactgaattttgcaaccaacgaattt 40018875  T
Q  258 g--agaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  ||||||||| |||||||||| ||||||||||||   |||  ||||||||||||||||||    
T  40018876 gtaagaaattttattttttccgtcactaatttccctttttaattttgttttttctagtagtg 40018937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 160 - 317
Target Start/End: Complemental strand, 15636895 - 15636735
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||| | || |||||||||||||||||||||||||| |||||||||||||||||||||   ||||      
T  15636895 acactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccatgaaatttg 15636796  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| |||||  |||||||||| ||||||||||||| ||||  ||| ||||||| ||||||    
T  15636795 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctggtagtg 15636735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 175 - 297
Target Start/End: Original strand, 35697447 - 35697570
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    |||||||| | ||||||||||||  ||| ||||| |||||| ||||||||||||||||||||||||||||||||||| ||||  ||||| ||||| ||||    
T  35697447 aaaaattaataaggaaaatttagc-atgaaaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaaaaatttgtgagagattttatttt 35697545  T
Q  273 ttccgttactaatttccctccctaa 297  Q
    |||||||||||||||||||||||||    
T  35697546 ttccgttactaatttccctccctaa 35697570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 20065225 - 20065074
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || | ||||||||||||||||||||||||| ||||||||||||||||||||   ||||  |||| ||||    
T  20065225 aaaaaacaaaaattagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattcagtcactaaattttgcgaccatgaaatttgtgaggaatt 20065126  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  20065125 tcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 20065074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 175 - 292
Target Start/End: Complemental strand, 37724136 - 37724017
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    |||||||||||||  |||||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  |||| |||||  ||||    
T  37724136 aaaaattagtgagagaaatttagtgagggaaaacgtgaaatccctcgctaataccgtcactaaattttgcgaccaaagaatttgtgaggaatttcatttt 37724037  T
Q  273 ttccgttactaatttccctc 292  Q
    |||||| |||||||||||||    
T  37724036 ttccgtcactaatttccctc 37724017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 161 - 317
Target Start/End: Complemental strand, 18551411 - 18551253
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tg 258  Q
    |||||||||||| ||||||||||||||| | |||||| || ||||||| | |||||||||||||||||||||||||||||||||||  || |||||  ||    
T  18551411 cactactaaaaaacaaaaattagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtg 18551312  T
Q  259 agaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || |||||  |||||||||| |||||||| |||| ||||  ||| ||||| ||||||||    
T  18551311 aggaatttcattttttccgtcactaattttcctcgctaattttgctttttttagtagtg 18551253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 28319713 - 28319580
Alignment:
Q  185 gaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttact 282  Q
    |||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||  |||||  |||| |||||  |||||||||| |||    
T  28319713 gagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcact 28319614  T
Q  283 aatttccctccctaaacttgttttttctagtagt 316  Q
    |||||||||| ||||  ||| |||||||||||||    
T  28319613 aatttccctcactaattttgctttttctagtagt 28319580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 190 - 317
Target Start/End: Original strand, 37552233 - 37552362
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || |||||| || |||||||||||||||||||||| ||||||||||||||||||||||  |||| |||||  |||||||||| ||||||||    
T  37552233 aaatttagtgagggaaaatgtaaaatccctctctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 37552332  T
Q  288 ccctccctaaacttgttttttctagtagtg 317  Q
    ||||| ||||  ||| ||||||||||||||    
T  37552333 ccctcgctaattttgctttttctagtagtg 37552362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 37802529 - 37802379
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-tgagaaattt 266  Q
    ||||| ||| ||||||||||| ||||||||||| ||||||||| |||||  ||||||||||||||||||||||||||||||||| ||||  |||| ||||    
T  37802529 aaaaaacaacaattagtgagggaaatttagagagggaaaacgtaaaatcagtctctaattccgtcactaaattttgcgaccaaaaaattgcgagagattt 37802430  T
Q  267 tgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    | |||||||||| |  |||||| ||||||||  ||| |||| |||||||||    
T  37802429 tattttttccgtcatcaatttctctccctaattttgcttttcctagtagtg 37802379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 168 - 310
Target Start/End: Original strand, 1141520 - 1141664
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || ||||||||||||||||||||||||||| ||||||||||||||||||||   ||||  |||| ||||    
T  1141520 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccatgaaatttgtgaggaatt 1141619  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttct 310  Q
    |  |||||||||| ||||||||||||| ||||  ||| |||||||    
T  1141620 tcattttttccgtcactaatttccctcgctaattttgctttttct 1141664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 319
Target Start/End: Complemental strand, 43408641 - 43408509
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| |||||||||||||||||||||||||||||||||||||||  ||||  |||| |||||  |||||||||| |||||||    
T  43408641 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatt 43408542  T
Q  287 tccctccctaaacttgttttttctagtagtgta 319  Q
    |||||| ||||  ||| ||||||||||||||||    
T  43408541 tccctcactaattttgctttttctagtagtgta 43408509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 27522984 - 27523084
Alignment:
Q  158 taacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt 256  Q
    |||||||||||||||  ||||||||||||||| | |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  27522984 taacactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatt 27523083  T
Q  257 t 257  Q
    |    
T  27523084 t 27523084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 32008927 - 32009089
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  | ||| ||||||||| |||||||  || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||      
T  32008927 acactactaaaaaaactaaatttagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttg 32009026  T
Q  257 tgagaaattt-tgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||| |||||   |||||||||| |||||||| |||| ||||  ||| |||||||||||||||    
T  32009027 tgaggaatttcatttttttccgtcactaattttcctcgctaattttgctttttctagtagtgt 32009089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 44476505 - 44476375
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgaga--aattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| ||  |||||  |||||||||| |||||||    
T  44476505 aaaaattagtgaaggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaagaatttcattttttccgtcactaatt 44476406  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    |||||| ||||  ||| ||||||||||||||    
T  44476405 tccctcgctaattttgctttttctagtagtg 44476375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 190 - 317
Target Start/End: Original strand, 12779606 - 12779735
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| |||| ||||||||||| |||||||||||||||||||||| |||||  |||| |||||  |||||||||| ||||||||    
T  12779606 aaatttagtgagggaaaacgtaaaattcctctctaatttcgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccgtcactaattt 12779705  T
Q  288 ccctccctaaacttgttttttctagtagtg 317  Q
    ||||| ||||  ||| ||||||||||||||    
T  12779706 ccctcgctaattttgctttttctagtagtg 12779735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 168 - 318
Target Start/End: Original strand, 27327600 - 27327752
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||| ||||| |||||||| || ||||||| |||||||||||| ||||||||||||||||||||||| | || |||||  |||| ||||    
T  27327600 aaaaaacaaaaattaatgagggaaatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgtctaaggaatttgtgaggaatt 27327699  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    || | |||||||| || ||||||| |||||||  ||| |||| ||||||||||    
T  27327700 ttatgttttccgtcacaaatttccatccctaattttgcttttcctagtagtgt 27327752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 159 - 297
Target Start/End: Complemental strand, 13613254 - 13613113
Alignment:
Q  159 aacactactaaaaagc-aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt- 256  Q
    ||||||||||||||   |||||||||  ||| || ||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  13613254 aacactactaaaaaaataaaaattagcaagggaagtttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 13613155  T
Q  257 -tgagaaattttgttttttccgttactaatttccctccctaa 297  Q
     |||| |||||  |||||| ||| |||||||| |||| ||||    
T  13613154 gtgaggaatttcatttttttcgtcactaattttcctcgctaa 13613113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 14757272 - 14757119
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||  | |||||| || ||||||| ||||||| |||||||||||||||||||||||||||||||||  ||||  |||| ||||    
T  14757272 aaaaaacaaaaattagtgagtgatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatt 14757173  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||||||| | |||||| | || ||||  ||| ||||||||||||||||    
T  14757172 tcattttttccgtcattaattttcttcgctaattttgctttttctagtagtgta 14757119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 29998719 - 29998633
Alignment:
Q  160 acactactaaaaa-gcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcg 245  Q
    ||||||||||||| | |||||||||||||| || |||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  29998719 acactactaaaaaagtaaaaattagtgagggaattttagagaaggaaaacgtgaaatccttctctaattccgtcactaaattttgcg 29998633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 168 - 318
Target Start/End: Original strand, 2556079 - 2556231
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||||||||||||||||||| || |||||||| |||||| |||||||   |||||||||||||||||||||||| | |||||  ||||  |||||||||    
T  2556079 aaaaagcaaaaattagtgagggaattttagagagggaaaatgtgaaatttttctctaattccgtcactaaattttacaaccaagaaatttgtgagaaatt 2556178  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    || |||||||| | |||||||| |||| ||||  ||  ||||| |||||||||    
T  2556179 ttattttttccatcactaattttcctctctaattttactttttttagtagtgt 2556231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 317
Target Start/End: Original strand, 7093573 - 7093703
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| ||||||||||||||||  |||||||||||||||||||||| ||||  |||| |||||  |||||||||| |||||||    
T  7093573 aaaaattagtgagggaaaacgtaaaatccctctctaattttgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactaatt 7093672  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    |||||| ||||  ||| |||| |||||||||    
T  7093673 tccctcgctaattttgcttttactagtagtg 7093703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 291
Target Start/End: Original strand, 28262355 - 28262473
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    |||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||||||||||| |||||   ||||  |||| |||||  ||||    
T  28262355 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcatttt 28262454  T
Q  273 ttccgttactaatttccct 291  Q
    |||| | ||||||||||||    
T  28262455 ttccatcactaatttccct 28262473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 36373875 - 36374034
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    |||||||||||||  |||||||||||||||||||||||| || |||||| ||||||| |  ||||||||| ||||||||||||| ||| ||| |||||||    
T  36373875 acactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaatgtgaaattc--ctctaattcagtcactaaattttacgatcaaggaatttg 36373972  T
Q  259 aga--aattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||   ||||| ||||||||||  |||| ||  ||||||||  |||||||| ||||||||||    
T  36373973 agagggattttattttttccgtcgctaaatttactccctaattttgtttttcctagtagtgt 36374034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 18916551 - 18916461
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    ||||| ||||||||||||||  |||||||| || ||||||| ||||||||||||||||||| ||||||||||||||||| |||| ||||||    
T  18916551 aaaaaacaaaaattagtgagagaaatttagggagggaaaacatgaaatccctctctaattcagtcactaaattttgcgatcaaaaaatttg 18916461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 192 - 320
Target Start/End: Original strand, 36550844 - 36550973
Alignment:
Q  192 atttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgaga-aattttgttttttccgttactaatttccc 290  Q
    |||||| || ||||||| |||||||||||| ||||||| ||||||||||||||||||||| || ||| ||    ||| |||||||| | |||||||||||    
T  36550844 atttagtgagggaaaacatgaaatccctctataattccatcactaaattttgcgaccaaataacttgtgagggatttattttttccatcactaatttccc 36550943  T
Q  291 tccctaaacttgttttttctagtagtgtaa 320  Q
    || ||||  |||||||||||||||||||||    
T  36550944 tctctaattttgttttttctagtagtgtaa 36550973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 168 - 318
Target Start/End: Original strand, 44722916 - 44723068
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg--agaaatt 265  Q
    ||||| ||||||  ||||||| | |||||| ||  |||||  |||||||||||||||||||||||||||||||||||||| || |||||||  || ||||    
T  44722916 aaaaaacaaaaaccagtgagggatatttagtgagagaaaatatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtaaggaatt 44723015  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |  |||||||| | | ||||||||||| ||||  ||| |||||||||||||||    
T  44723016 tcattttttccatcattaatttccctcgctaattttgctttttctagtagtgt 44723068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 159 - 291
Target Start/End: Complemental strand, 13134778 - 13134646
Alignment:
Q  159 aacactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaa--tt 256  Q
    |||||||| |||||  ||||||||||||| |||||||||||||||||||| |||||||||| |||||||  |||| |||||||| |||| ||| ||  |     
T  13134778 aacactacaaaaaa--aaaaattagtgagaaaaatttagagatggaaaacttgaaatccctttctaattttgtcaataaattttacgactaaaaaaattg 13134681  T
Q  257 tgagaaattttgttttttccgttactaatttccct 291  Q
    ||||  ||||| |||||||||| ||||||||||||    
T  13134680 tgagggattttattttttccgtcactaatttccct 13134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 190 - 317
Target Start/End: Complemental strand, 23858086 - 23857958
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgaga-aattttgttttttccgttactaatttc 288  Q
    |||||||| || ||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||| ||  | |||  |||| |||| |||||||||    
T  23858086 aaatttagtgagggaaaacgtaaaatcattctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttcccgtcactaatttc 23857987  T
Q  289 cctccctaaacttgttttttctagtagtg 317  Q
    |||| ||||  ||| ||||||||||||||    
T  23857986 cctcgctaattttgctttttctagtagtg 23857958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 168 - 307
Target Start/End: Complemental strand, 44366148 - 44366007
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| || ||||| || | ||||| |||||||||||||||||||| ||| | ||||||| |||||| |||||  |||| ||||    
T  44366148 aaaaaccaaaaattagtgagggaagtttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaatt 44366049  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttt 307  Q
    || ||||||| || | ||||||||||| ||||  ||||||||    
T  44366048 ttattttttctgtcattaatttccctctctaattttgttttt 44366007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 204 - 318
Target Start/End: Complemental strand, 26243436 - 26243320
Alignment:
Q  204 aaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaactt 301  Q
    ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||  |||| |||||| ||||| |||  |||||||||||||  |||  ||    
T  26243436 aaaacgtaaaattcctctctaattccgtcactaaattttacgaccaatgaatttgtgaggaattttatttttaccgccactaatttccctcgttaatttt 26243337  T
Q  302 gttttttctagtagtgt 318  Q
    | |||||||||||||||    
T  26243336 gctttttctagtagtgt 26243320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 317
Target Start/End: Complemental strand, 27040003 - 27039908
Alignment:
Q  224 aattccgtcactaaattttgcgaccaaagaatttgaga--aattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||||||||||||||||||||||||||  |||||| ||  |||||  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  27040003 aattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctagtagtg 27039908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 161 - 297
Target Start/End: Original strand, 8763612 - 8763749
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tg 258  Q
    ||||||||||||  ||||||||||||  ||||||||| || ||||||| |||||||| ||||||||||||||| ||||||||  || ||| |||||  ||    
T  8763612 cactactaaaaaa-aaaaattagtgaaaaaaatttagtgaaggaaaacatgaaatccatctctaattccgtcattaaattttatgatcaaggaatttgtg 8763710  T
Q  259 agaaattttgttttttccgttactaatttccctccctaa 297  Q
     || ||||| |||||||||| ||||| ||  ||||||||    
T  8763711 cgagattttattttttccgtcactaacttttctccctaa 8763749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 317
Target Start/End: Complemental strand, 9004453 - 9004308
Alignment:
Q  174 caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttt 271  Q
    ||||||||||||||| |||||||| || |||||| || ||||  |||||||||||| |||||||||||||  || || |||||  ||||||||||  |||    
T  9004453 caaaaattagtgagggaaatttagtgagggaaaatgtaaaatttctctctaattccatcactaaattttgtaactaaggaatttatgagaaatttcattt 9004354  T
Q  272 tttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
     |||||| |||||| | ||||  |||  || |||||||||||||||    
T  9004353 cttccgtcactaatattcctcgttaattttattttttctagtagtg 9004308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 38362401 - 38362276
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| |||||| | |||||||| |||||| |||||| |||||||||||||  |||| |||||  |||||||||| |||||||    
T  38362401 aaaaattagcgagggaaaacgtaaaatccttttctaattctgtcacttaattttacgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 38362302  T
Q  287 tccctccctaaacttgttttttctag 312  Q
    |||||  ||||  ||| |||||||||    
T  38362301 tcccttactaattttgctttttctag 38362276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 24117388 - 24117315
Alignment:
Q  161 cactactaa-aaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 233  Q
    ||||||||| ||| ||||||||||||||||||||||||||| | ||||| |||||| | |||||||||||||||    
T  24117388 cactactaagaaaacaaaaattagtgaggaaaatttagagaagaaaaacatgaaattcatctctaattccgtca 24117315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 27058467 - 27058407
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattc 228  Q
    ||||| ||||||||||||||| |||||||| || ||||||||| |||||||||||||||||    
T  27058467 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattc 27058407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 16099054 - 16098996
Alignment:
Q  169 aaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaatt 227  Q
    ||||||||||||| |||||| || |||||||| ||||| ||||||||||||||||||||    
T  16099054 aaaagcaaaaatttgtgagggaattttagagagggaaagcgtgaaatccctctctaatt 16098996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 297
Target Start/End: Original strand, 9590461 - 9590585
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaa--tttgagaaattttgtttt 272  Q
    |||||||||||||| |||||||| ||   ||||||||||||| ||||||||||  || ||||||||||||||  ||  ||  ||| | | ||||  ||||    
T  9590461 aaaaattagtgagggaaatttagcgagcaaaaacgtgaaatcgctctctaattttgttactaaattttgcgatgaagtaatttttaaaagatttcatttt 9590560  T
Q  273 ttccgttactaatttccctccctaa 297  Q
    |||||| ||||||||||||||||||    
T  9590561 ttccgtcactaatttccctccctaa 9590585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 18609506 - 18609588
Alignment:
Q  176 aaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    |||||||||| || |||||||| || ||||||| |||||| ||||||||||| | | || ||||||||||| ||| |||||||    
T  18609506 aaaattagtgggggaaatttagtgagggaaaacatgaaatacctctctaatttcatgacaaaattttgcgatcaaggaatttg 18609588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 227
Target Start/End: Original strand, 22192177 - 22192235
Alignment:
Q  169 aaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaatt 227  Q
    |||| ||||||||||||| | |||||||| || ||||||| ||||||||||||||||||    
T  22192177 aaaaacaaaaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaatt 22192235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 317
Target Start/End: Complemental strand, 16098965 - 16098917
Alignment:
Q  269 ttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    ||||||| |||||||||||||||||||||  ||| ||||||||||||||    
T  16098965 ttttttctgttactaatttccctccctaattttgatttttctagtagtg 16098917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 287
Target Start/End: Complemental strand, 31966633 - 31966555
Alignment:
Q  210 tgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt-gagaaattttgttttttccgttactaattt 287  Q
    ||||||| ||||||||||  || |||||||||||||||||| ||||||  ||  ||||| |||||||||| ||||||||    
T  31966633 tgaaatctctctctaattatgttactaaattttgcgaccaaggaatttatagggattttattttttccgtcactaattt 31966555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 6410836 - 6410912
Alignment:
Q  168 aaaaagcaaaaattagtgag-gaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttg 243  Q
    ||||| |||||||||| ||| |||| |||||||| |||||||   ||||| ||||||||||||| |||| |||||||    
T  6410836 aaaaaccaaaaattagcgagtgaaattttagagagggaaaacagaaaatcactctctaattccgccacttaattttg 6410912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 22192254 - 22192314
Alignment:
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    ||||| ||||| |||||||||| ||||||||| |||||| |  ||| ||||||||||||||    
T  22192254 tgagagattttattttttccgtcactaatttctctccctgattttgctttttctagtagtg 22192314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 37786373 - 37786409
Alignment:
Q  191 aatttagagatggaaaacgtgaaatccctctctaatt 227  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  37786373 aatttagagaaggaaaacatgaaatccctctctaatt 37786409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 160 - 317
Target Start/End: Complemental strand, 6139 - 5979
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||||| || ||||||||| |||||||||||||||||| |||||||||||||||||||| |||||      
T  6139 acactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttg 6040  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| |||||  |||||||||| ||||||||||||| ||||  ||||||||||||||||||    
T  6039 tgaggaatttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 5979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 5e-41; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 168 - 318
Target Start/End: Complemental strand, 50845481 - 50845329
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| |||||||||||| ||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  |||| ||||    
T  50845481 aaaaaacaaaaattagtgtggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatt 50845382  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    || | |||||||| || |||||||||||||||  ||| |||||||||||||||    
T  50845381 ttatgttttccgtcacaaatttccctccctaattttgctttttctagtagtgt 50845329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 38531330 - 38531169
Alignment:
Q  160 acactactaaaaa-gcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    ||||||||||||| | |||||||||||||| ||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||| || |||||      
T  38531330 acactactaaaaaagtaaaaattagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccatcactaaattttgcgactaaggaatttg 38531231  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||| |||||| |||||||||| ||| ||||||||||||||  ||  |||||||||||||||    
T  38531230 tgaggaattttattttttccgtcacttatttccctccctaattttactttttctagtagtgt 38531169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 175 - 317
Target Start/End: Original strand, 12720804 - 12720948
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    |||||||||||||| | |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||| ||||    
T  12720804 aaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatttt 12720903  T
Q  273 ttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  12720904 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 12720948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 168 - 285
Target Start/End: Complemental strand, 13523112 - 13522993
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  13523112 aaaaagcaaaaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaatt 13523013  T
Q  266 ttgttttttccgttactaat 285  Q
     | |||||||| | ||||||    
T  13523012 atattttttccataactaat 13522993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 168 - 297
Target Start/End: Original strand, 19081716 - 19081847
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||  |||||||||    
T  19081716 aaaaagcaaaaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaatt 19081815  T
Q  266 ttgttttttccgttactaatttccctccctaa 297  Q
    || |||||||| | ||||||||||||| ||||    
T  19081816 ttattttttccatcactaatttccctctctaa 19081847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 168 - 297
Target Start/End: Original strand, 19129604 - 19129735
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||  |||||||||    
T  19129604 aaaaagcaaaaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaatt 19129703  T
Q  266 ttgttttttccgttactaatttccctccctaa 297  Q
    || |||||||| | ||||||||||||| ||||    
T  19129704 ttattttttccatcactaatttccctctctaa 19129735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 41752421 - 41752572
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  ||| |||||    
T  41752421 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaaaaatt 41752520  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || |||||||||| |||||||||| || ||||  ||| ||||||||||||||    
T  41752521 ttattttttccgtcactaatttccgtcactaattttgctttttctagtagtg 41752572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 160 - 317
Target Start/End: Complemental strand, 22789751 - 22789593
Alignment:
Q  160 acactactaaaaa-gcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    ||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||| || |||||||| ||||||||||||||||||||  |||||      
T  22789751 acactactaaaaaagcaaaaattagtgagggaaatttagagagggaaaacgtgaaatctctatctaattcagtcactaaattttgcgaccatggaatttg 22789652  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    ||||||||||| | |||||||| |||||||| |||||||||  || |||||| ||||||||    
T  22789651 tgagaaattttatgttttccgtcactaattttcctccctaa--tttttttttttagtagtg 22789593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 168 - 318
Target Start/End: Complemental strand, 6412204 - 6412052
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||| ||||||||||||||||||||||||||||  ||||  |||| ||||    
T  6412204 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgaccaagaaatttgtgaggaatt 6412105  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |  |||||||||||||||||||||||| ||||  ||| |||||||||||||||    
T  6412104 tcattttttccgttactaatttccctcgctaattttgctttttctagtagtgt 6412052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 168 - 318
Target Start/End: Original strand, 6459205 - 6459357
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  |||| ||||    
T  6459205 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatt 6459304  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |  |||||||||| ||||||||||||| ||||  | | |||||||||||||||    
T  6459305 tcattttttccgtcactaatttccctcgctaatttcgctttttctagtagtgt 6459357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 168 - 318
Target Start/End: Original strand, 14760855 - 14761007
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||||| || ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||  |||| ||||    
T  14760855 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctcactaattccgtcactaaattttgcgaccaaagaatttgtgaggaatt 14760954  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    || | |||||||| || ||||||||||  |||  ||| |||||||||||||||    
T  14760955 ttatgttttccgtcacaaatttccctctttaattttgctttttctagtagtgt 14761007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 9110126 - 9109975
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||  |||| ||||    
T  9110126 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatt 9110027  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||||||||||||| ||||  ||| ||||||||||||||    
T  9110026 tcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 9109975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 45839280 - 45839431
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  |||| ||||    
T  45839280 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatt 45839379  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| |||||||||||||  |||  ||| ||||||||||||||    
T  45839380 tcattttttccgtcactaatttccctcgttaattttgctttttctagtagtg 45839431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 168 - 320
Target Start/End: Complemental strand, 18895051 - 18894897
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaga--atttgagaaatt 265  Q
    ||||| |||||||||||||||||||||||| || ||||||| |||||||||||||||||| |||||||||||||||||||||||||  || ||||  |||    
T  18895051 aaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgaggtatt 18894952  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgtaa 320  Q
    || |||||| ||| |||||||| |||| ||||  ||| |||| ||||||||||||    
T  18894951 ttatttttttcgtcactaattttcctcgctaattttgcttttcctagtagtgtaa 18894897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 168 - 292
Target Start/End: Complemental strand, 41071986 - 41071860
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||| ||||    
T  41071986 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatt 41071887  T
Q  266 ttgttttttccgttactaatttccctc 292  Q
    |  |||| ||||| |||||||||||||    
T  41071886 tcattttctccgtcactaatttccctc 41071860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 160 - 317
Target Start/End: Complemental strand, 9985487 - 9985327
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||| | || | ||||||| |||||||||||||||||||||| |||||||| |||||||||||||      
T  9985487 acactactaaaaacacaaaaattagtgagggaaattttgtgaggaaaaacgtaaaatccctctctaattccgtcaataaattttacgaccaaagaatttg 9985388  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| |||||  |||||||||| ||||||||||||  ||||  ||||||||||||||||||    
T  9985387 tgaggaatttgattttttccgtcactaatttcccttgctaattttgttttttctagtagtg 9985327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 12989840 - 12989991
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||||||||||||||||||| |||||| |||| ||||||||||||||| ||| ||||||| ||||||||| ||||||||||| |||||  |||||||||    
T  12989840 aaaaagcaaaaattagtgagggaaattttgagagggaaaacgtgaaatctctccctaattcagtcactaaactttgcgaccaaggaatttgtgagaaatt 12989939  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || |||||||||| || |||||| ||| ||||  ||| ||||| ||||||||    
T  12989940 ttattttttccgtcaccaatttctctctctaattttgctttttttagtagtg 12989991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 161 - 317
Target Start/End: Complemental strand, 20408319 - 20408160
Alignment:
Q  161 cactacta-aaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--t 257  Q
    |||||||| |||| ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||| |||||||||||||||||  |||||  |    
T  20408319 cactactataaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgttactaaattttgcgaccatggaatttgt 20408220  T
Q  258 gagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    ||| |||||  |||||||||| |||||||| |||| ||||  ||| ||||||||||||||    
T  20408219 gaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 20408160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 22603536 - 22603687
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||  |||| ||||    
T  22603536 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatcgctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaatt 22603635  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||| | ||||||||||||  ||||  ||| ||||||||||||||    
T  22603636 tcattttttccatcactaatttcccttgctaattttgctttttctagtagtg 22603687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 29549418 - 29549557
Alignment:
Q  180 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccg 277  Q
    ||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||||||| ||||| ||| ||||  ||||||||||| |||||| ||    
T  29549418 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaatttcgcgactaaaaaatttgtgagaaattttatttttttcg 29549517  T
Q  278 ttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    | ||||||||||||| ||||  ||| ||||||||||||||    
T  29549518 tcactaatttccctcgctaattttgctttttctagtagtg 29549557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 52183666 - 52183817
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||   ||||  |||| ||||    
T  52183666 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatt 52183765  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || |||||||||| | |||||||||||  |||  ||| ||||||||||||||    
T  52183766 ttattttttccgtcattaatttccctcgttaattttgctttttctagtagtg 52183817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 168 - 316
Target Start/End: Complemental strand, 9259334 - 9259184
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| |||| |||||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||||||||   ||||  |||||||||    
T  9259334 aaaaaacaaatattagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgagaaatt 9259235  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagt 316  Q
    || |||||||||| |||||||| ||||  |||  |||||||||||||||||    
T  9259234 ttcttttttccgtcactaattttcctcgttaattttgttttttctagtagt 9259184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 15243064 - 15243225
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||||| || |||||||||||||||||| |||||||||||||||||||||||||| ||| |||||      
T  15243064 acactactaaaaaatcaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgatcaaggaatttg 15243163  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||| |||||  |||||||||| ||||||||| ||| || |  ||  |||||||||||||||    
T  15243164 tgaggaatttcattttttccgtcactaatttctctcgctgatttttctttttctagtagtgt 15243225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 13102295 - 13102455
Alignment:
Q  159 aacactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    |||||||| ||||| ||||||||||||||| |||||||| || ||||||| | ||||| || |||||||||||||||||||||||||||||| |||||||    
T  13102295 aacactacaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacataaaatctctttctaattccgtcactaaattttgcgaccaaggaatttg 13102394  T
Q  259 aga--aattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
     ||  |||||| | |||||||| || ||||||||||| |||  ||| |||| |||||||||    
T  13102395 tgatgaattttatgttttccgtcacaaatttccctccttaattttgcttttcctagtagtg 13102455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 168 - 318
Target Start/End: Original strand, 46865231 - 46865383
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||||||||||||||||||| ||||| ||||| ||| |||||||||||||||||||||||| | ||||||||||||| ||||  ||||  ||||  |||    
T  46865231 aaaaagcaaaaattagtgagggaaattcagagagggagaacgtgaaatccctctctaattccattactaaattttgcggccaagaaatttgtgagggatt 46865330  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    || |||||||||| |||||||||||||||||   ||  |||||||||||||||    
T  46865331 ttattttttccgtcactaatttccctccctagtttttctttttctagtagtgt 46865383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 168 - 289
Target Start/End: Original strand, 9464091 - 9464214
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||  |||||  |||| ||||    
T  9464091 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatt 9464190  T
Q  266 ttgttttttccgttactaatttcc 289  Q
    |  |||||||||| ||||||||||    
T  9464191 tcattttttccgtcactaatttcc 9464214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 161 - 297
Target Start/End: Complemental strand, 16913735 - 16913597
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tg 258  Q
    ||||||||||||   ||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| || |||||  ||    
T  16913735 cactactaaaaaaacaaaattagtgagggaaatttagagagggaaaacatgaaatccctctctaattccgttattaaattttacgactaaggaatttgtg 16913636  T
Q  259 agaaattttgttttttccgttactaatttccctccctaa 297  Q
    || |||||| |||||||||| |||||||||||| |||||    
T  16913635 aggaattttattttttccgtcactaatttcccttcctaa 16913597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 161 - 297
Target Start/End: Complemental strand, 30928536 - 30928398
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg-- 258  Q
    |||||||||||| |||||||||||||||||||||||  ||  |||||| ||||||  |||||||||||  |||||||||||||||||||| |||||||      
T  30928536 cactactaaaaaacaaaaattagtgaggaaaatttactgagtgaaaacatgaaatttctctctaattctctcactaaattttgcgaccaaggaatttgtt 30928437  T
Q  259 agaaattttgttttttccgttactaatttccctccctaa 297  Q
    ||| ||||| |||||||||| ||||||||||||| ||||    
T  30928436 agagattttattttttccgtcactaatttccctctctaa 30928398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 162 - 318
Target Start/End: Original strand, 41063179 - 41063337
Alignment:
Q  162 actactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaga--atttga 259  Q
    ||||||||||| |||||||||||||||||||||||| || | ||||| | ||||| ||||||||||||||||||||||||||||| ||||||  || |||    
T  41063179 actactaaaaaacaaaaattagtgaggaaaatttagtgaggaaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaagaatatgtga 41063278  T
Q  260 gaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |  ||||| |||||||||| |||||||| ||| | |||  ||  |||||||||||||||    
T  41063279 gggattttattttttccgtcactaattttccttcttaattttactttttctagtagtgt 41063337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 158 - 320
Target Start/End: Complemental strand, 7181717 - 7181552
Alignment:
Q  158 taacactactaaaaagcaaaa-attagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca--aagaa 254  Q
    |||||||||||||||   ||| |||||||||| |||||| |  | |||||||||||||||||||||||||||||||||||||||||| |||||  ||  |    
T  7181717 taacactactaaaaaaataaatattagtgagggaaattttgtaagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaata 7181618  T
Q  255 tttgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgtaa 320  Q
    | |||| |||||| |||||||||| ||||||||||||  ||||  ||| |||||||||||||||||    
T  7181617 tgtgaggaattttcttttttccgtcactaatttcccttgctaattttgctttttctagtagtgtaa 7181552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 171 - 253
Target Start/End: Complemental strand, 14486780 - 14486698
Alignment:
Q  171 aagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaga 253  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||| ||||||    
T  14486780 aagcaaaaattagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactgaattttgcgatcaaaga 14486698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 175 - 317
Target Start/End: Original strand, 7830026 - 7830170
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    |||||||||||||| |||||||| || ||||||| ||||||||||| |||||| |||||||||||||||||||||| |||||  ||||||||||| | ||    
T  7830026 aaaaattagtgagggaaatttagtgagggaaaacatgaaatccctccctaatttcgtcactaaattttgcgaccaaggaatttgtgagaaattttatgtt 7830125  T
Q  273 ttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| | |  |||||||||||||||  ||| |||| |||||||||    
T  7830126 ttccatcataaatttccctccctaattttgcttttcctagtagtg 7830170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 168 - 318
Target Start/End: Original strand, 23457885 - 23458037
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||   ||||  |||| ||||    
T  23457885 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatt 23457984  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |  |||||||||| | |||||| |||| ||||  ||  |||||||||||||||    
T  23457985 tcattttttccgtcaataattttcctcgctaattttactttttctagtagtgt 23458037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 168 - 318
Target Start/End: Original strand, 51973412 - 51973564
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| |||| |||| ||||| |||||| | || |||||| |||||||  |||||||||||||||||||||||||||||||| ||| ||  |||| ||||    
T  51973412 aaaaaacaaatattaatgagggaaattttgtgagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccatagattttatgaggaatt 51973511  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |  |||||||||||||||||||||||| ||||  ||| |||||||||||||||    
T  51973512 tcattttttccgttactaatttccctcgctaattttgctttttctagtagtgt 51973564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 168 - 297
Target Start/End: Original strand, 11917774 - 11917904
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||  || |||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||  ||||| |||    
T  11917774 aaaaaacaaaaattagtgagataagtttagagagggaaaacgtgaactccctttctaattccgtcactaaattttgcgaccaaataatttgtgagatatt 11917873  T
Q  266 ttgttttttccgttactaatttccctccctaa 297  Q
    ||||||||| ||| ||| ||||||||| ||||    
T  11917874 ttgtttttt-cgtcactgatttccctctctaa 11917904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 12161802 - 12161953
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||   ||||  |||| ||||    
T  12161802 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatt 12161901  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| | |||||| |||| ||||  ||  ||||||||||||||    
T  12161902 tcattttttccgtcaataattttcctcgctaattttactttttctagtagtg 12161953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 318
Target Start/End: Original strand, 19865253 - 19865384
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||  |||||||||| |||||||    
T  19865253 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatt 19865352  T
Q  287 tccctccctaaacttgttttttctagtagtgt 318  Q
    | |||| ||||  ||  |||||||||||||||    
T  19865353 ttcctcgctaattttactttttctagtagtgt 19865384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 168 - 297
Target Start/End: Original strand, 22158790 - 22158921
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||   ||||  |||| ||||    
T  22158790 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatt 22158889  T
Q  266 ttgttttttccgttactaatttccctccctaa 297  Q
    |  ||||||| || ||||||||||||| ||||    
T  22158890 tcattttttctgtcactaatttccctcgctaa 22158921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 318
Target Start/End: Complemental strand, 28229585 - 28229454
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| |||||||||||||||||| |||||||||||||||||||| |||||  |||| |||||  |||||||||| |||||||    
T  28229585 aaaaattagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 28229486  T
Q  287 tccctccctaaacttgttttttctagtagtgt 318  Q
    |||||| ||||  ||| |||||||||||||||    
T  28229485 tccctcgctaattttgctttttctagtagtgt 28229454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 318
Target Start/End: Original strand, 46790009 - 46790140
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||  |||| |||||  |||||||||| |||||||    
T  46790009 aaaaattagtgagggaaaacgtaaaatccctttctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 46790108  T
Q  287 tccctccctaaacttgttttttctagtagtgt 318  Q
    |||||| ||||  ||| |||||||||||||||    
T  46790109 tccctcgctaattttgctttttctagtagtgt 46790140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 190 - 318
Target Start/End: Original strand, 4340417 - 4340547
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||  |||||||||| ||||||||    
T  4340417 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 4340516  T
Q  288 ccctccctaaacttgttttttctagtagtgt 318  Q
    ||||  ||||  ||| |||||||| ||||||    
T  4340517 cccttgctaattttgctttttctaatagtgt 4340547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 190 - 317
Target Start/End: Original strand, 9177110 - 9177239
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || | ||||||| |||||||||| ||||| ||||||||||||||||||||||  ||||  |||| |||||  |||||||||||||||||||    
T  9177110 aaatttagtgaggaaaaacgtaaaatccctctttaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgttactaattt 9177209  T
Q  288 ccctccctaaacttgttttttctagtagtg 317  Q
    ||||| ||||  ||||||||||||||||||    
T  9177210 ccctcgctaattttgttttttctagtagtg 9177239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 17200170 - 17200009
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||||| || | ||||  | |||| | ||| |||||||||||||||||||||||||||| |||||      
T  17200170 acactactaaaaaaacaaaaattagtgagggaaatttagtgaggaaaaatataaaattcttctttaattccgtcactaaattttgcgaccaatgaatttg 17200071  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||| |||||  |||||||||| ||| ||||||||| ||||  |||||||||||||||||||    
T  17200070 tgaggaatttcattttttccgtcactgatttccctcgctaattttgttttttctagtagtgt 17200009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 168 - 318
Target Start/End: Complemental strand, 12370092 - 12369950
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgagaaatttt 267  Q
    ||||| ||||||||||||||| ||||||||  | ||||||| | |||||| ||||||||||||||||||||||||||||||||||||||| |            
T  12370092 aaaaaacaaaaattagtgagggaaatttagtaagggaaaacataaaatccttctctaattccgtcactaaattttgcgaccaaagaatttca-------- 12370001  T
Q  268 gttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
     |||||||||| ||||||||||||| ||||  ||| |||||||||||||||    
T  12370000 tttttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 12369950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 167 - 289
Target Start/End: Original strand, 17661037 - 17661161
Alignment:
Q  167 taaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaat 264  Q
    |||||| ||||||||||||||| |||||| | || |||||||||||||| ||||||||||||| |||||||||||||||||||   ||||  |||| |||    
T  17661037 taaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccatcactaaattttgcgaccatgaaatttgtgaggaat 17661136  T
Q  265 tttgttttttccgttactaatttcc 289  Q
    ||| |||||||||| ||||||||||    
T  17661137 tttattttttccgtcactaatttcc 17661161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 175 - 317
Target Start/End: Original strand, 48522513 - 48522657
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    |||||||||||||| | || ||| || ||||||| |||||| |||||  |||||||||||||||||||||||||||| ||||  ||||||||||| ||||    
T  48522513 aaaaattagtgagggatatgtagtgagggaaaacatgaaattcctcttaaattccgtcactaaattttgcgaccaaaaaatttgtgagaaattttatttt 48522612  T
Q  273 ttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    ||| || |||||||| |||| ||||  ||| ||||||||||||||    
T  48522613 ttctgtcactaattttcctcgctaattttgctttttctagtagtg 48522657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 190 - 319
Target Start/End: Complemental strand, 41120866 - 41120735
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||  ||||  |||| |||||  |||||||| | ||||||||    
T  41120866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccatcactaattt 41120767  T
Q  288 ccctccctaaacttgttttttctagtagtgta 319  Q
    ||||| ||||  ||| |||||||| |||||||    
T  41120766 ccctcgctaattttgctttttctattagtgta 41120735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 46786087 - 46785964
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaa--tttgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| |||||||||||||||||||||| |||||||||||||||| |||  | ||||||||||  |||||||||| ||||||||    
T  46786087 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgaccaaggaacttgtgagaaatttcattttttccgtcactaattt 46785988  T
Q  288 ccctccctaaacttgttttttcta 311  Q
    ||||| ||||  ||| ||||||||    
T  46785987 ccctcgctaattttgctttttcta 46785964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 168 - 318
Target Start/End: Complemental strand, 18788061 - 18787912
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt--gagaaatt 265  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||| |||  |||||||||  |||||||||||||||||||||| |||||  |||  |||    
T  18788061 aaaaagcaaaaattagtgagggaaatttaaagagggaaaacgtgacatcaatctctaatt--gtcactaaattttgcgaccaaaaaatttaggagggatt 18787964  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    || |||||| ||| |||||||||| |||||||  ||| |||||| ||||||||    
T  18787963 ttatttttt-cgtcactaatttccatccctaattttgctttttcaagtagtgt 18787912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 46339596 - 46339443
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| |||||| || ||||| | ||||||  | ||||||| ||||||| |||||||||||||||||||||||||||||| || |||||  |||| ||||    
T  46339596 aaaaaacaaaaactaatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatt 46339497  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||||||| |||||||| |||| ||||  ||| ||||||||||||||||    
T  46339496 tcattttttccgtcactaattttcctcgctaattttgctttttctagtagtgta 46339443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 168 - 318
Target Start/End: Original strand, 13195571 - 13195723
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    |||||||||||||| |||||| ||||||||||| |||||| |  ||||||||||||||||| |||||||||||||||| || | |||||  |||| ||||    
T  13195571 aaaaagcaaaaatttgtgagggaaatttagagagggaaaatgcaaaatccctctctaattctgtcactaaattttgcgtcccaggaattcgtgaggaatt 13195670  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    ||   |||||| | |||||| |||||||||||  |||  ||||||||||||||    
T  13195671 ttaacttttccatcactaatctccctccctaattttgcattttctagtagtgt 13195723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 16258631 - 16258550
Alignment:
Q  174 caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaat 255  Q
    ||||||||||||||||||||||||||| | ||||||||||| |||||| |||||||||||||||||||||| ||||| ||||    
T  16258631 caaaaattagtgaggaaaatttagagaggaaaaacgtgaaaaccctctataattccgtcactaaattttgcaaccaaggaat 16258550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 161 - 258
Target Start/End: Original strand, 26825221 - 26825318
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    ||||||||||||  |||||||||  ||| || |||||||| |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||    
T  26825221 cactactaaaaaagaaaaattagcaagggaattttagagagggaaaacgtgaaattcctctctaattccgtcactaaattttacgatcaaagaatttg 26825318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 211 - 316
Target Start/End: Complemental strand, 25788105 - 25787998
Alignment:
Q  211 gaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaacttgtttttt 308  Q
    |||||||||||||||||||||||||||||||||||||||  |||||  |||| |||||| |||||||||| |||||||| |||| ||||  ||| |||||    
T  25788105 gaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttcttttttccgtcactaattttcctcgctaattttgcttttt 25788006  T
Q  309 ctagtagt 316  Q
    ||||||||    
T  25788005 ctagtagt 25787998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 8941124 - 8940994
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| |||| |||||||||||||||| ||||||||| ||| ||| |||||  ||||||||||  |||||||||| |||||||    
T  8941124 aaaaattagtgagggaaaacgtaaaattcctctctaattccgtcgctaaattttacgatcaaggaatttgtgagaaatttcattttttccgtcactaatt 8941025  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    |||||| ||||  ||| ||||||||||||||    
T  8941024 tccctcgctaattttgctttttctagtagtg 8940994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 310
Target Start/End: Complemental strand, 18890693 - 18890556
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    |||||||||||||| |||||| | ||  ||||||||||||||||||||||||||||| |||||||||||||||||   ||||  |||| |||||  ||||    
T  18890693 aaaaattagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgttactaaattttgcgaccattaaatttgtgaggaatttcatttt 18890594  T
Q  273 ttccgttactaatttccctccctaaacttgttttttct 310  Q
    |||| | ||||||||||||| ||||  ||| |||||||    
T  18890593 ttccatcactaatttccctcgctaattttgctttttct 18890556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 168 - 297
Target Start/End: Original strand, 20580897 - 20581029
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    |||||| |||||||||||||  || |||||||| |||||||||||||||||||||||||| ||| | ||||||||||||| || |||||  |||||||||    
T  20580897 aaaaagtaaaaattagtgagagaattttagagagggaaaacgtgaaatccctctctaatttcgtaattaaattttgcgactaaggaatttgtgagaaatt 20580996  T
Q  266 t-tgttttttccgttactaatttccctccctaa 297  Q
    |   |||||||| | ||||||||||||| ||||    
T  20580997 taatttttttccatcactaatttccctctctaa 20581029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 287
Target Start/End: Complemental strand, 12174903 - 12174796
Alignment:
Q  182 agtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgtt 279  Q
    ||||||| | |||||| || ||||||| |||||||| ||||||||||||||||||||||||||||| || |||||  |||| |||||| ||||||| |||    
T  12174903 agtgagggatatttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgacgaaggaatttgtgaggaattttattttttctgtt 12174804  T
Q  280 actaattt 287  Q
    ||||||||    
T  12174803 actaattt 12174796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 27253955 - 27253854
Alignment:
Q  219 tctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagt 316  Q
    |||||||||||||||||||||||||||||||  |||||  ||||||||||| |||||||||| | |||||| |||||||||  ||  |||||||||||||    
T  27253955 tctctaattccgtcactaaattttgcgaccatggaatttgtgagaaattttattttttccgtcattaattttcctccctaatttttctttttctagtagt 27253856  T
Q  317 gt 318  Q
    ||    
T  27253855 gt 27253854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 29093705 - 29093627
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcga 246  Q
    |||||| |||||||||||||| |||||||||||||||||| || |||| ||||||||||||| ||| ||||||||||||    
T  29093705 aaaaagtaaaaattagtgagggaaatttagagatggaaaatgtaaaattcctctctaattccatcattaaattttgcga 29093627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 287
Target Start/End: Original strand, 32046853 - 32046985
Alignment:
Q  158 taacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt 256  Q
    |||||||||||||||  | ||| ||||||||| |||| ||| || ||||||||| ||||| ||||||||||||| |||||||||||||||||||  ||||    
T  32046853 taacactactaaaaaaactaaatttagtgagggaaatatagtgagggaaaacgtaaaatctctctctaattccgacactaaattttgcgaccaagaaatt 32046952  T
Q  257 --tgagaaattttgttttttccgttactaattt 287  Q
      |||| |||||  |||||||||| ||||||||    
T  32046953 tgtgaggaatttcattttttccgtcactaattt 32046985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 204 - 317
Target Start/End: Complemental strand, 13308935 - 13308820
Alignment:
Q  204 aaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaactt 301  Q
    ||||| |||||||||||||||||| | ||||||||||||||||||||  ||||  |||| |||||| ||||||| |  ||||||||||||| ||||  ||    
T  13308935 aaaacatgaaatccctctctaatttcatcactaaattttgcgaccaataaatttgtgaggaattttattttttcggacactaatttccctctctaatttt 13308836  T
Q  302 gttttttctagtagtg 317  Q
    |||||| |||||||||    
T  13308835 gtttttcctagtagtg 13308820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 317
Target Start/End: Original strand, 39748942 - 39749072
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt--gagaaattttgttttttccgttactaatt 286  Q
    ||||||||| || ||||||| ||||||||| ||| |||| |||||||||||||||||| |||| || ||  |||| ||||| |||||||||| |||||||    
T  39748942 aaaatttagtgaaggaaaacatgaaatccccctcaaatttcgtcactaaattttgcgatcaaacaaattgcgagagatttttttttttccgtcactaatt 39749041  T
Q  287 tccctccctaaacttgttttttctagtagtg 317  Q
    || |||| |||  ||| |||| |||||||||    
T  39749042 tcgctccttaattttgcttttcctagtagtg 39749072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 41359020 - 41359094
Alignment:
Q  212 aaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaa 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||| |||||  |||||||||| |||||    
T  41359020 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaa 41359094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 317
Target Start/End: Complemental strand, 50092456 - 50092298
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tg 258  Q
    ||||||||||||   |||| ||| |||  |||||| | || ||||||| |||||||||||||||||||||||||||||||||| || ||   ||||  ||    
T  50092456 cactactaaaaaaacaaaaatagggagagaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgatcatgaaatttgtg 50092357  T
Q  259 agaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    || |||||  |||||||||| ||||||||||||| ||||  ||  ||||||||||||||    
T  50092356 aggaatttcattttttccgtcactaatttccctcgctaatttttctttttctagtagtg 50092298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 316
Target Start/End: Complemental strand, 17734105 - 17733954
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaa-ttttgcgaccaaagaatt--tgagaaat 264  Q
    ||||| ||||||||||||||| |||||||| || ||||||| ||||||| ||| |||||||| ||| |||| ||||||||||||  ||||  ||||| ||    
T  17734105 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatctctcgctaattccatcattaaatttttgcgaccaagaaatttgtgagagat 17734006  T
Q  265 tttgttttttccgttactaatttccctccctaaacttgttttttctagtagt 316  Q
    ||| | |||||||| ||||| ||  ||||||||  ||| |||| ||||||||    
T  17734005 tttatcttttccgtcactaaattttctccctaattttgcttttcctagtagt 17733954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 287
Target Start/End: Original strand, 52621142 - 52621263
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| |||||||||||||||||||||||| || | ||||| |||||| | || |||||||| ||||||||||||  ||| ||| ||||  ||||| |||    
T  52621142 aaaaaacaaaaattagtgaggaaaatttagtgaggaaaaacatgaaattcttcactaattccatcactaaattttatgactaaataatttatgagagatt 52621241  T
Q  266 ttgttttttccgttactaattt 287  Q
    || |||||||| | ||||||||    
T  52621242 ttattttttccatcactaattt 52621263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 204 - 297
Target Start/End: Complemental strand, 12806952 - 12806856
Alignment:
Q  204 aaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattt-tgttttttccgttactaatttccctccctaa 297  Q
    ||||| |||||||||||| |||||||||||||||||||| |||||||  ||||  ||||| |||| | ||||||| || ||||||||||||||||||    
T  12806952 aaaacttgaaatccctctataattccgtcactaaattttacgaccaagaaatttgtgagagatttattttttttctgtcactaatttccctccctaa 12806856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 318
Target Start/End: Complemental strand, 20290471 - 20290320
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgaga-aattt 266  Q
    ||||| ||||||||||||||  |||||| | ||  ||||||||||||||  |||||||||||||||||||||||| || |||   |||||| ||  | ||    
T  20290471 aaaaaacaaaaattagtgagagaaattttgtgagagaaaacgtgaaatcattctctaattccgtcactaaattttacggccatgaaatttgtgaggaatt 20290372  T
Q  267 tgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |  ||||||||| ||||||||||||| ||||  ||  ||||||||| |||||    
T  20290371 tcatttttccgtcactaatttccctcgctaattttactttttctagcagtgt 20290320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 276
Target Start/End: Complemental strand, 6091385 - 6091297
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttcc 276  Q
    ||||||||||||||||||||| |||| ||| |||||||| |||||  ||||||||| | ||||||||   ||||||||| |||||||||    
T  6091385 aaatttagagatggaaaacgtaaaattcctatctaattctgtcacagaattttgcggcaaaagaattagagagaaatttcgttttttcc 6091297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 25687409 - 25687355
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgc 244  Q
    ||||||||||| ||||||| | | |||||||||||||||| ||||||||||||||    
T  25687409 aaatttagagaaggaaaacattacatccctctctaattccttcactaaattttgc 25687355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 13295087 - 13295039
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatc 216  Q
    ||||||||||||||||| | | ||||||||||| |||||||||||||||    
T  13295087 aaaaagcaaaaattagtaacggaaatttagagagggaaaacgtgaaatc 13295039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 293
Target Start/End: Original strand, 49881053 - 49881159
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||| ||| ||||||||||||||||| | || ||||||||||| |||||| |||||  ||| | ||||| |||||||||| ||||| |    
T  49881053 aaaaattagtgagggataacatgaaatccctctctaatcctgttactaaattttgtgaccaaggaatttatgaaagattttattttttccgtcactaact 49881152  T
Q  287 tccctcc 293  Q
    | |||||    
T  49881153 ttcctcc 49881159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 246
Target Start/End: Complemental strand, 9882144 - 9882110
Alignment:
Q  212 aaatccctctctaattccgtcactaaattttgcga 246  Q
    |||| ||||||||||||||||||||||||||||||    
T  9882144 aaattcctctctaattccgtcactaaattttgcga 9882110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 242
Target Start/End: Original strand, 30673502 - 30673556
Alignment:
Q  188 gaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaatttt 242  Q
    |||||||||| || ||||||| |||||||||||||||||||  | ||||||||||    
T  30673502 gaaaatttagtgagggaaaacatgaaatccctctctaattctattactaaatttt 30673556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 45919011 - 45918966
Alignment:
Q  212 aaatccctctctaattccgtcactaaattttgcgaccaaagaattt 257  Q
    ||||||||||||||||| || |||||||||||| ||||| ||||||    
T  45919011 aaatccctctctaattctgttactaaattttgcaaccaaggaattt 45918966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 6775881 - 6775965
Alignment:
Q  174 caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 258  Q
    ||||||||| ||||  |||||||| ||   ||||| | |||| |||||||||||||||  |||| |||||| |||||||||||||    
T  6775881 caaaaattaatgagagaaatttagtgagaaaaaacttaaaattcctctctaattccgttgctaagttttgcaaccaaagaatttg 6775965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 27253989 - 27253957
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagaga 200  Q
    ||||||||||||||||||||| |||||||||||    
T  27253989 aaaaagcaaaaattagtgagggaaatttagaga 27253957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 9389 - 9228
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||||| || ||||||||| |||||| |||||||||||||||||||||||||||||||| |||||      
T  9389 acactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttg 9290  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||| |||||  |||||||||| ||||||||||||| ||||  ||| |||||||||||||||    
T  9289 tgaggaatttcattttttccgtcactaatttccctcactaattttgctttttctagtagtgt 9228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 168 - 319
Target Start/End: Original strand, 19591 - 19744
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  |||| ||||    
T  19591 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatt 19690  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||||||| ||||||||||||  ||||  ||| ||||||||||||||||    
T  19691 tcattttttccgtcactaatttcccttgctaattttgctttttctagtagtgta 19744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 158 - 320
Target Start/End: Complemental strand, 74703 - 74538
Alignment:
Q  158 taacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt 256  Q
    |||||||||||||||  ||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||    
T  74703 taacactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatt 74604  T
Q  257 --tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgtaa 320  Q
      |||| |||||| | |||||||| || |||||||||||||||  ||  |||| ||||||||||||    
T  74603 tatgaggaattttatgttttccgtcacaaatttccctccctaattttacttttcctagtagtgtaa 74538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 160 - 317
Target Start/End: Complemental strand, 37947 - 37787
Alignment:
Q  160 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||||||  ||||||||||||||| |||||| | || ||||||| |||||||||||||||||||||||||||||||||||||||| | ||||      
T  37947 acactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccataaaatttg 37848  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||| |||||| |||||||||| |||||||||||   ||||  ||||||||||||||||||    
T  37847 tgaggaattttattttttccgtcactaatttcccctgctaattttgttttttctagtagtg 37787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 78; Significance: 3e-36; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 175 - 317
Target Start/End: Original strand, 202769 - 202913
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    ||||||||||||||||||||||| || ||||||||| |||| |||||||||||||||||||||||||||||||||| |||||  |||| |||||  ||||    
T  202769 aaaaattagtgaggaaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagcaatttcatttt 202868  T
Q  273 ttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||||| ||||||||||||| ||||  ||  ||||||||||||||    
T  202869 ttccgtcactaatttccctcgctaatttttctttttctagtagtg 202913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 3746 - 3883
Alignment:
Q  184 tgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttac 281  Q
    ||||| |||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||  |||||||||| ||    
T  3746 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 3845  T
Q  282 taatttccctccctaaacttgttttttctagtagtgta 319  Q
    |||||| |||| ||||  ||| ||||||||||||||||    
T  3846 taattttcctcgctaattttgctttttctagtagtgta 3883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 276293 - 276207
Alignment:
Q  161 cactactaaaa-agcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcga 246  Q
    ||||||||||| | ||||||||||||||| |||||| | ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  276293 cactactaaaagaacaaaaattagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgtcactaaattttgcga 276207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 317
Target Start/End: Complemental strand, 274713 - 274665
Alignment:
Q  269 ttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||||||||| ||||||||||||| ||||  ||||||||||||||||||    
T  274713 ttttttccgtcactaatttccctcgctaattttgttttttctagtagtg 274665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 168 - 318
Target Start/End: Complemental strand, 1070 - 917
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  |||| ||||    
T  1070 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgaggaatt 971  T
Q  266 tt-gttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    ||  |||||||||| | ||||||||||| ||||  ||| |||||||||||||||    
T  970 ttatttttttccgtcagtaatttccctcgctaattttgctttttctagtagtgt 917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 12632 - 12792
Alignment:
Q  160 acactactaa-aaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    |||||||||| ||| ||||||||||||||| |||||| | || |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||      
T  12632 acactactaagaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaa-tccctctctaattccgtcactaaattttgcgaccatagaattta 12730  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    |||| |||||  |||||||||| ||||||||||||| ||||  ||| |||||| ||||||||    
T  12731 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttcaagtagtgt 12792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 180 - 319
Target Start/End: Original strand, 26483 - 26624
Alignment:
Q  180 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccg 277  Q
    ||||||||| | |||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||| |||||  |||||||||    
T  26483 ttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 26582  T
Q  278 ttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    | |||||||||| || ||||  ||| ||||||||||||||||    
T  26583 tcactaatttccgtcactaattttgctttttctagtagtgta 26624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 58560 - 58721
Alignment:
Q  159 aacactactaaaaagc-aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaa--t 255  Q
    ||||||||||||||   |||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||  ||  |    
T  58560 aacactactaaaaaaataaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaattt 58659  T
Q  256 ttgagaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    ||||| |||||| | |||||||| || |||||||||||||||  ||| |||| |||||||||    
T  58660 ttgaggaattttatgttttccgtcacaaatttccctccctaattttgcttttcctagtagtg 58721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 75; Significance: 2e-34; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 8261 - 8108
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg--agaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  || ||||    
T  8261 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatt 8162  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||||||| | ||||||||||| ||||  ||| ||||||||| ||||||    
T  8161 tcattttttccgtcattaatttccctcgctaattttgctttttctagaagtgta 8108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 21993 - 21840
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg--agaaatt 265  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  || ||||    
T  21993 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatt 21894  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||||||| | ||||||||||| ||||  ||| ||||||||| ||||||    
T  21893 tcattttttccgtcattaatttccctcgctaattttgctttttctagaagtgta 21840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 84291 - 84442
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||| |||||| | || |||||| ||||||||||||||||||||||||||||||||||| |||||   ||||  |||| ||||    
T  84291 aaaaaacaaaaattagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatt 84390  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| ||||||||||||  ||||  ||| ||||||||||||||    
T  84391 tcattttttccgtcactaatttcccttgctaattttgctttttctagtagtg 84442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 297
Target Start/End: Complemental strand, 121138 - 121007
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    |||||||||| || ||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||  |||||||||    
T  121138 aaaaagcaaacatcagtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagaaatt 121039  T
Q  266 ttgttttttccgttactaatttccctccctaa 297  Q
    || |||||| | | ||||||||||||| ||||    
T  121038 ttatttttttcataactaatttccctctctaa 121007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 313
Target Start/End: Complemental strand, 84804 - 84678
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||||||||| |||||||||||||||||| |||||||||||||||||||| |||||  |||| |||||  ||||||| || |||||||    
T  84804 aaaaattagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttctgtcactaatt 84705  T
Q  287 tccctccctaaacttgttttttctagt 313  Q
    |||||| ||||  ||| ||||||||||    
T  84704 tccctcactaattttgctttttctagt 84678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 174 - 316
Target Start/End: Original strand, 7499 - 7643
Alignment:
Q  174 caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttt 271  Q
    ||||| ||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||  ||||  |||| |||||  | |    
T  7499 caaaatttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatat 7598  T
Q  272 tttccgttactaatttccctccctaaacttgttttttctagtagt 316  Q
    ||||||| ||||||||||||| ||||  ||| |||||||||||||    
T  7599 tttccgtcactaatttccctcgctaattttgctttttctagtagt 7643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 175 - 297
Target Start/End: Original strand, 10153 - 10277
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgtttt 272  Q
    |||||||||||||| |||||||  || ||||||| |||||||||||||||||||||||||||||||||||||  ||||||||  |||| |||||| | ||    
T  10153 aaaaattagtgagggaaatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgattaaagaatttgtgaggaattttatgtt 10252  T
Q  273 ttccgttactaatttccctccctaa 297  Q
    |||||| || |||||||||||||||    
T  10253 ttccgtcacaaatttccctccctaa 10277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 190 - 318
Target Start/End: Complemental strand, 15119 - 14989
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||  ||||  |||| |||||  ||||||| || ||||||||    
T  15119 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcattttttcggtcactaattt 15020  T
Q  288 ccctccctaaacttgttttttctagtagtgt 318  Q
    ||||| ||||  ||| |||||||||||||||    
T  15019 ccctcgctaattttgctttttctagtagtgt 14989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 178 - 318
Target Start/End: Original strand, 43915 - 44057
Alignment:
Q  178 aattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttc 275  Q
    |||||||||||||||||||| || ||||||||| |||| | ||||||||||||| | ||||||||||||||||||||||  |||| |||||  |||||||    
T  43915 aattagtgaggaaaatttagtgagggaaaacgtaaaattcttctctaattccgttattaaattttgcgaccaaagaatttgtgaggaatttcattttttc 44014  T
Q  276 cgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    | | ||||||||||||| ||||  ||  |||||||||||||||    
T  44015 catcactaatttccctcgctaatttttctttttctagtagtgt 44057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 190 - 322
Target Start/End: Original strand, 22221 - 22355
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||| || |||||  |||| |||||  |||||| ||| ||||||||    
T  22221 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatttttttcgtcactaattt 22320  T
Q  288 ccctccctaaacttgttttttctagtagtgtaatg 322  Q
    ||||| ||||  ||| |||||||||||||| ||||    
T  22321 ccctcgctaattttgctttttctagtagtgaaatg 22355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 168 - 318
Target Start/End: Complemental strand, 3311 - 3161
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    |||||||||||||| |||||| ||||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||||||   ||||  |||| || |    
T  3311 aaaaagcaaaaatttgtgagggaaatttagag--ggaaaacgtgaaatccctcactaattctgtcactaaattttgcgaccatgaaatttgtgaggaact 3214  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgt 318  Q
    || | |||||||| ||||||||||||||||||  ||  |||||||| ||||||    
T  3213 ttatcttttccgtcactaatttccctccctaatttttctttttctattagtgt 3161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 39854 - 39701
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt--gagaaatt 265  Q
    ||||| ||||||||||||||| ||||||   || ||||||||||||||| ||||||||||||||||||||||||||| ||||   |||||  ||| ||||    
T  39854 aaaaaacaaaaattagtgagggaaattttatgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcaaccatgaaatttgggaggaatt 39755  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||||| | ||||||||||||| ||||  ||| ||||||||||||||||    
T  39754 tcattttttccatcactaatttccctcgctaattttgctttttctagtagtgta 39701  T

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Target: scaffold0128 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 190 - 319
Target Start/End: Complemental strand, 10792 - 10661
Alignment:
Q  190 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaattt 287  Q
    |||||||| || ||||||||| |||| ||||||||||||||||||||||||||||||| || |||||  |||| |||||  |||||||||| ||||||||    
T  10792 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 10693  T
Q  288 ccctccctaaacttgttttttctagtagtgta 319  Q
    ||||| ||||  ||| ||||||||| ||||||    
T  10692 ccctcgctaattttgctttttctagcagtgta 10661  T

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Target: scaffold0009 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 219624 - 219775
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaatt 265  Q
    ||||| ||||||||||||||  | |||||| || ||||||| |||||||||||||||||||||| ||||||||||||||  ||| ||||  |||| ||||    
T  219624 aaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaatccctctctaattccgttactaaattttgcgattaaaaaatttgtgaggaatt 219723  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |  |||||||||| |||||||||| || ||||  ||| ||||||||||||||    
T  219724 tcattttttccgtcactaatttccgtcgctaattttgctttttctagtagtg 219775  T

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Target: scaffold0009; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 212 - 316
Target Start/End: Original strand, 182562 - 182668
Alignment:
Q  212 aaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatttccctccctaaacttgttttttc 309  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||  |||||||||| ||||||||||||| ||||  ||  ||||||    
T  182562 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaattttactttttc 182661  T
Q  310 tagtagt 316  Q
    |||||||    
T  182662 tagtagt 182668  T

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Target: scaffold0019 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 175 - 289
Target Start/End: Original strand, 173439 - 173557
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt----tgagaaattttgtt 270  Q
    |||||||||||| | | |||||| || ||||||| | ||||| |||||||||||||||||||||||||||||||||||||||    ||||||||||  ||    
T  173439 aaaaattagtgatggatatttagtgagggaaaacataaaatcactctctaattccgtcactaaattttgcgaccaaagaatttttatgagaaatttcatt 173538  T
Q  271 ttttccgttactaatttcc 289  Q
    |||||||| ||||||||||    
T  173539 ttttccgtcactaatttcc 173557  T

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Target: scaffold0035 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 168 - 291
Target Start/End: Complemental strand, 74869 - 74743
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaa-cgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaat 264  Q
    ||||| ||||||||||||| | | |||||| || |||||| | ||||||||||||||||||| ||||||||||||| |||||| ||||||  ||||||||    
T  74869 aaaaaacaaaaattagtgaaggatatttagtgagggaaaaacatgaaatccctctctaattctgtcactaaattttacgaccagagaatttgtgagaaat 74770  T
Q  265 tttgttttttccgttactaatttccct 291  Q
    ||  |||||||||| ||||||||||||    
T  74769 ttcattttttccgtcactaatttccct 74743  T

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Target: scaffold0161 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 319
Target Start/End: Original strand, 6783 - 6936
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgaga--aatt 265  Q
    ||||| ||||||||||| ||| |||||||| || ||||||| |||||| ||||||||||||||||| |||||||||| || ||  |||||| ||  ||||    
T  6783 aaaaaacaaaaattagtaagggaaatttagtgagggaaaacatgaaattcctctctaattccgtcattaaattttgcaacgaagaaatttgcgaagaatt 6882  T
Q  266 ttgttttttccgttactaatttccctccctaaacttgttttttctagtagtgta 319  Q
    |  |||||||||| | ||||||||||| ||||  ||| ||||||||||| ||||    
T  6883 tcattttttccgtcaataatttccctcgctaattttgctttttctagtaatgta 6936  T

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Target: scaffold0024 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 250
Target Start/End: Original strand, 112316 - 112398
Alignment:
Q  168 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaa 250  Q
    |||||| |||||||||||||||||||| ||||| | ||||||| |||||||||||||||||||||| |||||||||| |||||    
T  112316 aaaaagaaaaaattagtgaggaaaattcagagaggaaaaacgttaaatccctctctaattccgtcattaaattttgcaaccaa 112398  T

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Target: scaffold0184 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 292
Target Start/End: Original strand, 7451 - 7570
Alignment:
Q  175 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgaga--aattttgtttt 272  Q
    |||||||| ||||| |||||||| || ||||||||||||||||||||||||||| ||||||||| |||||||| || || |||| ||  |||||  ||||    
T  7451 aaaaattaatgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaactttgcgactaaggattttgtgaagaatttcatttt 7550  T
Q  273 ttccgttactaatttccctc 292  Q
    |||||| |||||||| ||||    
T  7551 ttccgtcactaattttcctc 7570  T

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Target: scaffold0502 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 297
Target Start/End: Original strand, 10871 - 11011
Alignment:
Q  160 acactactaaaaagc-aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt-- 256  Q
    ||||||||||||| | |||||||||||||| |||||||  || | ||||| |||||| |||||||||||| |||||||||||||| |||||| |||||      
T  10871 acactactaaaaaaccaaaaattagtgagggaaatttactgaggaaaaacatgaaattcctctctaattctgtcactaaattttgtgaccaaggaatttg 10970  T
Q  257 tgagaaattttgttttttccgttactaatttccctccctaa 297  Q
    |||| |||||| | |||| ||| || ||||||| |||||||    
T  10971 tgaggaattttatatttttcgtcacaaatttccttccctaa 11011  T

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Target: scaffold0011 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 17705 - 17617
Alignment:
Q  231 tcactaaattttgcgaccaaagaatttgaga--aattttgttttttccgttactaatttccctccctaaacttgttttttctagtagtg 317  Q
    |||||||| ||||||||||| ||||||| ||  |||||  |||||||||| ||||||||||||| ||||  ||||||||||||||||||    
T  17705 tcactaaagtttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 17617  T

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Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 318
Target Start/End: Original strand, 439972 - 440103
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || |||||| || ||||||||||||||||||||||||||||||||||| |||  ||||  |||| |||||  |||||||||| ||||||     
T  439972 aaaaattagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaata 440071  T
Q  287 tccctccctaaacttgttttttctagtagtgt 318  Q
    | |||  ||||  ||  |||||||||||||||    
T  440072 ttccttgctaattttactttttctagtagtgt 440103  T

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Target: scaffold0038 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 316
Target Start/End: Original strand, 22071 - 22228
Alignment:
Q  161 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt--g 258  Q
    ||||||||||||   |||||| | |||| ||||||| | |||||| || |||||||  ||||||| |   ||| |||| ||||||| |||| |||||  |    
T  22071 cactactaaaaaaacaaaattggcgagggaaatttacaaatggaacacatgaaatcattctctaactttctcattaaagtttgcgatcaaaaaatttatg 22170  T
Q  259 agaaattttgttttttccgttactaatttccctccctaaacttgttttttctagtagt 316  Q
    ||||||||| |||||||| | |||||||||||||||| |  |||||||| ||| ||||    
T  22171 agaaattttattttttccctcactaatttccctccctgattttgtttttcctaatagt 22228  T

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Target: scaffold0284 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 287
Target Start/End: Complemental strand, 1649 - 1549
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt--tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||| ||| ||||| ||||||||||||  || |||||||||||||||||| |||||  ||||  ||||| |||||||||| |||||||    
T  1649 aaaaattagtgagggataacatgaaacccctctctaattatgttactaaattttgcgaccaaggaatttatgagggattttattttttccgtcactaatt 1550  T
Q  287 t 287  Q
    |    
T  1549 t 1549  T

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Target: scaffold0211 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 287
Target Start/End: Complemental strand, 19268 - 19168
Alignment:
Q  189 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaa-agaatt-tgagaaattttgttttttccgttactaatt 286  Q
    |||| |||| || ||| ||| ||||||||||||||||||  ||  ||||||||||||||||| | |||| ||||| ||||| |||||||||| | |||||    
T  19268 aaaaattagtgagggataacatgaaatccctctctaattatgtttctaaattttgcgaccaagaaaattatgagagattttattttttccgtcattaatt 19169  T
Q  287 t 287  Q
    |    
T  19168 t 19168  T

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