View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6353_low_5 (Length: 444)

Name: NF6353_low_5
Description: NF6353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6353_low_5
NF6353_low_5
[»] chr5 (74 HSPs)
chr5 (18-434)||(13287311-13287736)
chr5 (106-205)||(21191056-21191156)
chr5 (106-215)||(6247572-6247681)
chr5 (102-205)||(21522709-21522813)
chr5 (102-205)||(21533275-21533379)
chr5 (124-209)||(22013369-22013455)
chr5 (102-209)||(37328840-37328948)
chr5 (106-205)||(15382436-15382538)
chr5 (102-199)||(19552541-19552637)
chr5 (102-197)||(31084296-31084386)
chr5 (102-165)||(39698541-39698604)
chr5 (107-196)||(36642763-36642853)
chr5 (110-194)||(24906305-24906390)
chr5 (102-166)||(7677704-7677768)
chr5 (61-176)||(10298558-10298668)
chr5 (102-196)||(19579669-19579764)
chr5 (107-166)||(42893359-42893418)
chr5 (111-184)||(14674249-14674323)
chr5 (106-164)||(21576745-21576803)
chr5 (101-218)||(2436875-2436986)
chr5 (102-205)||(21541989-21542093)
chr5 (110-172)||(7218271-7218333)
chr5 (106-172)||(8420020-8420086)
chr5 (102-176)||(16374338-16374412)
chr5 (106-172)||(33178018-33178084)
chr5 (106-209)||(19820396-19820498)
chr5 (126-210)||(40000555-40000640)
chr5 (105-166)||(41633734-41633795)
chr5 (102-166)||(21351901-21351965)
chr5 (99-201)||(30135277-30135380)
chr5 (109-184)||(43001780-43001856)
chr5 (102-157)||(5894829-5894884)
chr5 (113-199)||(6326304-6326391)
chr5 (106-172)||(28588674-28588740)
chr5 (54-157)||(36838551-36838656)
chr5 (114-199)||(4105222-4105310)
chr5 (103-172)||(12641667-12641736)
chr5 (106-147)||(15884006-15884047)
chr5 (102-166)||(3966502-3966566)
chr5 (108-164)||(17177025-17177081)
chr5 (113-190)||(15405062-15405138)
chr5 (106-196)||(16203795-16203886)
chr5 (103-166)||(30183548-30183611)
chr5 (103-157)||(6471886-6471940)
chr5 (61-157)||(22423765-22423863)
chr5 (124-205)||(41995430-41995512)
chr5 (124-209)||(42469176-42469262)
chr5 (125-205)||(6770502-6770583)
chr5 (124-165)||(24273048-24273089)
chr5 (124-165)||(24389125-24389166)
chr5 (106-155)||(43564891-43564940)
chr5 (124-176)||(4344731-4344783)
chr5 (103-147)||(12199948-12199992)
chr5 (105-157)||(40131629-40131681)
chr5 (123-170)||(12280447-12280494)
chr5 (117-203)||(22299492-22299578)
chr5 (106-157)||(30502388-30502439)
chr5 (106-157)||(30542731-30542782)
chr5 (101-172)||(39205873-39205944)
chr5 (102-157)||(41091253-41091308)
chr5 (102-184)||(8325060-8325142)
chr5 (102-168)||(38749559-38749625)
chr5 (130-199)||(41558707-41558777)
chr5 (124-157)||(5467996-5468029)
chr5 (132-184)||(7175045-7175098)
chr5 (107-171)||(19028999-19029066)
chr5 (118-171)||(27932229-27932282)
chr5 (134-193)||(3751958-3752017)
chr5 (121-157)||(9449477-9449513)
chr5 (102-157)||(17088292-17088348)
chr5 (102-206)||(21814225-21814324)
chr5 (124-199)||(26205778-26205854)
chr5 (124-172)||(30098319-30098367)
chr5 (124-172)||(31264431-31264479)
[»] scaffold0223 (1 HSPs)
scaffold0223 (75-209)||(20127-20261)
[»] chr6 (96 HSPs)
chr6 (102-199)||(9107366-9107464)
chr6 (102-205)||(16766656-16766760)
chr6 (102-218)||(8365515-8365631)
chr6 (102-209)||(12696280-12696387)
chr6 (102-205)||(5970104-5970202)
chr6 (106-199)||(426514-426608)
chr6 (106-199)||(34595099-34595193)
chr6 (106-206)||(853859-853960)
chr6 (106-199)||(7977830-7977924)
chr6 (106-205)||(8776973-8777073)
chr6 (107-205)||(7938075-7938174)
chr6 (102-191)||(10770670-10770760)
chr6 (102-205)||(8713944-8714043)
chr6 (103-209)||(3398574-3398680)
chr6 (111-209)||(31959115-31959213)
chr6 (106-199)||(3209347-3209441)
chr6 (106-176)||(7801156-7801226)
chr6 (101-205)||(9027137-9027242)
chr6 (114-205)||(4118341-4118433)
chr6 (102-209)||(7930260-7930368)
chr6 (61-164)||(9911483-9911587)
chr6 (108-191)||(16833281-16833365)
chr6 (106-157)||(403864-403915)
chr6 (107-189)||(15489733-15489816)
chr6 (106-184)||(17841589-17841668)
chr6 (103-205)||(31384879-31384982)
chr6 (112-196)||(1681726-1681811)
chr6 (102-157)||(9522899-9522954)
chr6 (106-184)||(28152079-28152157)
chr6 (106-157)||(28715303-28715354)
chr6 (106-199)||(5732510-5732604)
chr6 (61-157)||(2117084-2117174)
chr6 (113-209)||(17341671-17341767)
chr6 (106-209)||(4877895-4878002)
chr6 (101-157)||(9025489-9025545)
chr6 (110-209)||(25038075-25038175)
chr6 (106-172)||(32978899-32978966)
chr6 (112-166)||(1191706-1191760)
chr6 (124-209)||(6389698-6389784)
chr6 (92-196)||(9629351-9629457)
chr6 (124-209)||(9658835-9658920)
chr6 (114-191)||(17435172-17435250)
chr6 (107-168)||(24645477-24645539)
chr6 (128-199)||(5000648-5000720)
chr6 (106-165)||(6327518-6327577)
chr6 (106-157)||(6898281-6898332)
chr6 (106-157)||(7265593-7265644)
chr6 (102-205)||(18367796-18367899)
chr6 (102-157)||(21395304-21395358)
chr6 (102-172)||(7086788-7086858)
chr6 (107-188)||(13851712-13851794)
chr6 (106-172)||(19040345-19040411)
chr6 (106-172)||(23771572-23771637)
chr6 (116-166)||(25010212-25010262)
chr6 (102-172)||(26562682-26562752)
chr6 (106-172)||(33001289-33001355)
chr6 (102-199)||(34073343-34073441)
chr6 (106-155)||(1700362-1700411)
chr6 (104-157)||(7151420-7151473)
chr6 (137-198)||(12868706-12868762)
chr6 (105-157)||(9617442-9617494)
chr6 (124-172)||(10842525-10842573)
chr6 (124-156)||(16388251-16388283)
chr6 (121-173)||(17168886-17168938)
chr6 (102-157)||(17302564-17302620)
chr6 (124-164)||(31579243-31579283)
chr6 (103-154)||(7973665-7973716)
chr6 (61-172)||(8805525-8805638)
chr6 (102-173)||(8931598-8931669)
chr6 (103-205)||(10294066-10294169)
chr6 (102-165)||(32320665-32320728)
chr6 (106-157)||(32511666-32511717)
chr6 (118-168)||(2224223-2224273)
chr6 (106-155)||(7027251-7027301)
chr6 (103-157)||(9195751-9195805)
chr6 (102-172)||(19369810-19369880)
chr6 (106-202)||(1334623-1334720)
chr6 (124-165)||(5462686-5462727)
chr6 (124-157)||(12627595-12627628)
chr6 (107-172)||(13360373-13360438)
chr6 (102-151)||(17327651-17327700)
chr6 (106-147)||(26402680-26402721)
chr6 (124-157)||(34225827-34225860)
chr6 (61-97)||(3209481-3209517)
chr6 (114-158)||(6349745-6349789)
chr6 (106-166)||(7377978-7378038)
chr6 (124-164)||(7569186-7569226)
chr6 (106-166)||(7996378-7996438)
chr6 (106-166)||(8022363-8022423)
chr6 (132-172)||(9526038-9526077)
chr6 (133-196)||(13632025-13632089)
chr6 (102-206)||(16488586-16488685)
chr6 (106-166)||(21924935-21924995)
chr6 (64-96)||(23130405-23130437)
chr6 (107-147)||(27904037-27904077)
chr6 (107-147)||(31429004-31429044)
[»] chr2 (74 HSPs)
chr2 (104-209)||(20539672-20539778)
chr2 (106-209)||(19536397-19536502)
chr2 (103-199)||(15657829-15657926)
chr2 (113-209)||(21374706-21374804)
chr2 (106-209)||(38117159-38117257)
chr2 (106-191)||(30404850-30404936)
chr2 (124-199)||(28412315-28412391)
chr2 (106-196)||(15972841-15972932)
chr2 (106-196)||(18421931-18422022)
chr2 (102-206)||(23058438-23058544)
chr2 (106-209)||(21624221-21624326)
chr2 (102-166)||(30717526-30717590)
chr2 (106-165)||(2438719-2438778)
chr2 (103-205)||(36756341-36756444)
chr2 (106-184)||(37558957-37559036)
chr2 (106-189)||(30335392-30335476)
chr2 (103-166)||(974746-974809)
chr2 (102-157)||(12668419-12668474)
chr2 (102-209)||(33153380-33153487)
chr2 (110-215)||(6940205-6940310)
chr2 (107-165)||(11223864-11223922)
chr2 (112-189)||(12940941-12941019)
chr2 (102-156)||(37419752-37419806)
chr2 (102-209)||(14996219-14996327)
chr2 (107-191)||(18841014-18841099)
chr2 (102-172)||(4882692-4882762)
chr2 (124-209)||(21782836-21782922)
chr2 (102-172)||(24894382-24894452)
chr2 (109-209)||(23717982-23718082)
chr2 (109-209)||(24105654-24105754)
chr2 (108-165)||(29176495-29176552)
chr2 (113-170)||(39323259-39323316)
chr2 (90-157)||(18420417-18420485)
chr2 (102-205)||(34337177-34337276)
chr2 (106-162)||(5040735-5040793)
chr2 (124-206)||(16069272-16069354)
chr2 (106-165)||(18255980-18256039)
chr2 (102-205)||(26769476-26769574)
chr2 (124-189)||(21616737-21616803)
chr2 (124-166)||(28677908-28677950)
chr2 (103-157)||(44860328-44860382)
chr2 (124-196)||(10535777-10535850)
chr2 (106-209)||(20242727-20242830)
chr2 (106-166)||(20473321-20473381)
chr2 (102-205)||(34784978-34785082)
chr2 (106-197)||(43586005-43586097)
chr2 (106-157)||(5367200-5367251)
chr2 (131-205)||(11670714-11670789)
chr2 (102-157)||(18622614-18622669)
chr2 (106-157)||(34691805-34691856)
chr2 (106-157)||(34714217-34714268)
chr2 (107-166)||(42832277-42832336)
chr2 (102-164)||(30527591-30527653)
chr2 (124-205)||(31284007-31284089)
chr2 (124-189)||(36409645-36409711)
chr2 (125-158)||(2331801-2331834)
chr2 (124-157)||(5473336-5473369)
chr2 (125-186)||(10547947-10548011)
chr2 (107-199)||(18276486-18276579)
chr2 (101-166)||(24975320-24975385)
chr2 (106-206)||(28596431-28596528)
chr2 (108-157)||(44605141-44605190)
chr2 (106-143)||(44635520-44635557)
chr2 (124-164)||(1886896-1886936)
chr2 (124-199)||(4332891-4332967)
chr2 (124-164)||(22084850-22084890)
chr2 (124-168)||(23921250-23921294)
chr2 (124-172)||(30298465-30298513)
chr2 (106-197)||(31018557-31018649)
chr2 (102-150)||(32749821-32749869)
chr2 (177-209)||(33519741-33519773)
chr2 (124-164)||(35449514-35449554)
chr2 (126-166)||(37411264-37411304)
chr2 (108-164)||(39279676-39279732)
[»] chr7 (77 HSPs)
chr7 (102-205)||(24339601-24339705)
chr7 (102-209)||(27944996-27945104)
chr7 (102-209)||(43027465-43027573)
chr7 (61-209)||(7328640-7328795)
chr7 (102-198)||(13770657-13770754)
chr7 (102-166)||(7438705-7438769)
chr7 (101-184)||(18215181-18215265)
chr7 (106-209)||(24105634-24105737)
chr7 (106-205)||(26733263-26733363)
chr7 (92-172)||(2334241-2334323)
chr7 (102-196)||(5409832-5409927)
chr7 (107-205)||(11061077-11061176)
chr7 (106-172)||(25481895-25481961)
chr7 (105-166)||(9408333-9408394)
chr7 (102-205)||(9778467-9778563)
chr7 (102-208)||(32094016-32094124)
chr7 (102-157)||(26033457-26033512)
chr7 (105-166)||(3991323-3991384)
chr7 (102-157)||(18039006-18039062)
chr7 (107-218)||(33994159-33994270)
chr7 (102-199)||(1433419-1433517)
chr7 (103-199)||(1885538-1885635)
chr7 (102-155)||(11272582-11272637)
chr7 (105-165)||(19992001-19992061)
chr7 (102-205)||(22602706-22602810)
chr7 (112-199)||(43249958-43250046)
chr7 (102-157)||(7058434-7058489)
chr7 (106-157)||(19213811-19213862)
chr7 (106-157)||(21880160-21880211)
chr7 (106-173)||(28155562-28155629)
chr7 (105-176)||(35861953-35862024)
chr7 (109-202)||(2425736-2425830)
chr7 (106-172)||(7197297-7197363)
chr7 (105-147)||(21560521-21560563)
chr7 (102-199)||(26329378-26329476)
chr7 (61-206)||(49107780-49107923)
chr7 (102-159)||(11890915-11890972)
chr7 (107-199)||(19206015-19206108)
chr7 (102-205)||(6028584-6028688)
chr7 (106-166)||(8234145-8234205)
chr7 (102-157)||(11665436-11665491)
chr7 (129-199)||(11722121-11722192)
chr7 (102-157)||(13300418-13300473)
chr7 (106-209)||(21864761-21864867)
chr7 (105-172)||(25822648-25822715)
chr7 (106-172)||(15680802-15680868)
chr7 (124-174)||(29787387-29787437)
chr7 (102-172)||(32308113-32308183)
chr7 (97-197)||(36297336-36297436)
chr7 (60-96)||(3142021-3142057)
chr7 (116-172)||(11831425-11831481)
chr7 (124-199)||(17851396-17851472)
chr7 (106-166)||(20549790-20549850)
chr7 (102-205)||(21140978-21141082)
chr7 (107-151)||(48438560-48438604)
chr7 (102-157)||(15902830-15902885)
chr7 (102-157)||(16341504-16341559)
chr7 (102-157)||(18013070-18013125)
chr7 (107-157)||(1401033-1401083)
chr7 (115-199)||(13557750-13557838)
chr7 (106-168)||(32287463-32287525)
chr7 (110-156)||(40287361-40287406)
chr7 (107-199)||(598173-598266)
chr7 (125-209)||(2034397-2034481)
chr7 (124-157)||(2424622-2424655)
chr7 (102-155)||(5548686-5548739)
chr7 (124-165)||(8056963-8057003)
chr7 (106-155)||(9482944-9482993)
chr7 (124-165)||(11700803-11700844)
chr7 (107-172)||(42720891-42720956)
chr7 (102-201)||(5235949-5236049)
chr7 (103-186)||(10042915-10042999)
chr7 (102-154)||(17307904-17307956)
chr7 (56-96)||(21568557-21568597)
chr7 (106-197)||(21826240-21826332)
chr7 (124-156)||(30731046-30731078)
chr7 (124-172)||(41020489-41020537)
[»] chr3 (80 HSPs)
chr3 (104-199)||(28917966-28918062)
chr3 (103-199)||(15796291-15796388)
chr3 (92-199)||(3164011-3164119)
chr3 (106-209)||(8587021-8587125)
chr3 (106-209)||(55401030-55401134)
chr3 (106-209)||(10954912-10955011)
chr3 (106-205)||(16000016-16000116)
chr3 (106-199)||(10335286-10335380)
chr3 (106-208)||(8383213-8383316)
chr3 (103-209)||(14216848-14216954)
chr3 (103-209)||(14222977-14223083)
chr3 (106-205)||(21479083-21479177)
chr3 (106-165)||(51206353-51206412)
chr3 (102-172)||(4987287-4987357)
chr3 (102-199)||(41961646-41961744)
chr3 (102-205)||(750614-750719)
chr3 (107-172)||(10268487-10268552)
chr3 (92-172)||(34185108-34185189)
chr3 (105-165)||(1509539-1509599)
chr3 (102-205)||(14747526-14747625)
chr3 (102-197)||(14829657-14829752)
chr3 (109-165)||(26508110-26508166)
chr3 (102-166)||(49651782-49651846)
chr3 (103-205)||(4990964-4991067)
chr3 (106-196)||(25093470-25093561)
chr3 (105-172)||(34910310-34910377)
chr3 (102-172)||(14209106-14209176)
chr3 (106-191)||(26492205-26492291)
chr3 (104-165)||(21256984-21257045)
chr3 (103-172)||(28812508-28812577)
chr3 (112-199)||(24205047-24205135)
chr3 (102-166)||(27505245-27505309)
chr3 (106-164)||(25775509-25775568)
chr3 (102-157)||(25948883-25948938)
chr3 (102-172)||(14832092-14832162)
chr3 (90-210)||(16788966-16789088)
chr3 (112-197)||(35994744-35994829)
chr3 (101-203)||(39756203-39756300)
chr3 (108-166)||(55212962-55213020)
chr3 (107-195)||(3610602-3610691)
chr3 (106-166)||(7928449-7928509)
chr3 (108-156)||(20503474-20503522)
chr3 (124-171)||(14979175-14979222)
chr3 (103-203)||(11665905-11666006)
chr3 (106-209)||(4466600-4466704)
chr3 (106-205)||(7171461-7171560)
chr3 (106-165)||(8593136-8593196)
chr3 (124-215)||(25064859-25064950)
chr3 (111-190)||(35312028-35312108)
chr3 (106-209)||(8789550-8789648)
chr3 (106-199)||(10318035-10318134)
chr3 (113-206)||(11610479-11610573)
chr3 (103-165)||(15314873-15314935)
chr3 (103-157)||(17005616-17005670)
chr3 (126-172)||(23870579-23870625)
chr3 (112-205)||(34307786-34307880)
chr3 (130-172)||(40052325-40052367)
chr3 (102-190)||(9800014-9800103)
chr3 (108-165)||(24633403-24633460)
chr3 (124-164)||(4201397-4201437)
chr3 (106-166)||(7614415-7614475)
chr3 (90-157)||(8039818-8039886)
chr3 (102-166)||(16192746-16192810)
chr3 (102-157)||(1550148-1550203)
chr3 (125-195)||(25652050-25652121)
chr3 (106-165)||(33359761-33359820)
chr3 (106-157)||(38731226-38731277)
chr3 (106-172)||(40993335-40993402)
chr3 (107-149)||(3865690-3865732)
chr3 (124-166)||(16789668-16789710)
chr3 (102-172)||(22774066-22774136)
chr3 (124-166)||(32804558-32804600)
chr3 (176-209)||(8842285-8842318)
chr3 (124-157)||(11251986-11252019)
chr3 (124-157)||(29508452-29508485)
chr3 (112-172)||(5339101-5339161)
chr3 (102-166)||(11313796-11313860)
chr3 (124-172)||(11493379-11493427)
chr3 (106-172)||(32400708-32400771)
chr3 (124-172)||(41319328-41319376)
[»] scaffold0027 (1 HSPs)
scaffold0027 (106-205)||(46641-46741)
[»] chr8 (66 HSPs)
chr8 (102-205)||(2572052-2572156)
chr8 (102-205)||(22651935-22652039)
chr8 (107-209)||(4298887-4298989)
chr8 (55-165)||(25566841-25566954)
chr8 (102-197)||(29510300-29510396)
chr8 (90-199)||(22197725-22197836)
chr8 (102-209)||(13436960-13437068)
chr8 (114-209)||(41838131-41838227)
chr8 (103-209)||(11927083-11927190)
chr8 (103-209)||(11944620-11944727)
chr8 (107-205)||(31556956-31557054)
chr8 (106-191)||(20873042-20873128)
chr8 (116-209)||(28642363-28642457)
chr8 (112-166)||(41831946-41832000)
chr8 (107-205)||(4673426-4673525)
chr8 (106-209)||(22595955-22596053)
chr8 (102-172)||(29447106-29447176)
chr8 (106-210)||(24669388-24669492)
chr8 (102-205)||(24857968-24858074)
chr8 (109-209)||(25192350-25192451)
chr8 (106-157)||(4948660-4948711)
chr8 (106-199)||(18170482-18170576)
chr8 (106-199)||(18634050-18634144)
chr8 (102-215)||(28745448-28745561)
chr8 (105-166)||(8342971-8343032)
chr8 (103-172)||(15816126-15816195)
chr8 (106-184)||(36450754-36450833)
chr8 (106-172)||(5813585-5813651)
chr8 (102-172)||(30271287-30271357)
chr8 (124-205)||(36934629-36934711)
chr8 (105-166)||(8343315-8343376)
chr8 (102-205)||(24362198-24362302)
chr8 (106-166)||(24613520-24613579)
chr8 (108-156)||(40332200-40332248)
chr8 (102-165)||(21465412-21465475)
chr8 (106-157)||(30077387-30077438)
chr8 (106-199)||(926788-926882)
chr8 (112-166)||(18407718-18407772)
chr8 (106-172)||(34897078-34897144)
chr8 (95-156)||(17468497-17468558)
chr8 (127-170)||(949285-949328)
chr8 (131-189)||(3677761-3677820)
chr8 (106-172)||(4786338-4786404)
chr8 (106-172)||(13844596-13844662)
chr8 (107-157)||(20679396-20679446)
chr8 (108-157)||(31514880-31514930)
chr8 (92-199)||(44067481-44067589)
chr8 (124-176)||(13018270-13018322)
chr8 (92-159)||(16867191-16867261)
chr8 (102-166)||(28384990-28385054)
chr8 (177-209)||(40332160-40332192)
chr8 (106-157)||(3025559-3025610)
chr8 (101-172)||(5307054-5307124)
chr8 (111-193)||(27213518-27213601)
chr8 (106-184)||(31109518-31109597)
chr8 (109-172)||(31236580-31236643)
chr8 (103-165)||(11803259-11803321)
chr8 (107-157)||(14134707-14134757)
chr8 (108-157)||(7442853-7442902)
chr8 (127-172)||(27101508-27101553)
chr8 (106-159)||(33405384-33405437)
chr8 (132-172)||(12936517-12936557)
chr8 (105-145)||(26902174-26902214)
chr8 (132-164)||(35519833-35519865)
chr8 (124-172)||(39954297-39954345)
chr8 (108-172)||(42874515-42874579)
[»] chr4 (71 HSPs)
chr4 (106-205)||(23292986-23293086)
chr4 (114-209)||(11651142-11651238)
chr4 (61-190)||(14126064-14126196)
chr4 (103-205)||(27706174-27706277)
chr4 (106-199)||(21945468-21945562)
chr4 (102-209)||(28084476-28084585)
chr4 (102-166)||(3947762-3947826)
chr4 (106-205)||(12895274-12895374)
chr4 (102-157)||(11596348-11596403)
chr4 (102-196)||(19482636-19482731)
chr4 (107-205)||(35157986-35158085)
chr4 (102-172)||(12895112-12895182)
chr4 (102-172)||(24613697-24613767)
chr4 (104-184)||(30298926-30299008)
chr4 (104-184)||(30327794-30327876)
chr4 (108-157)||(29205452-29205501)
chr4 (106-157)||(28964248-28964299)
chr4 (106-172)||(49431018-49431085)
chr4 (92-172)||(50280874-50280956)
chr4 (106-157)||(54580023-54580074)
chr4 (108-158)||(6485613-6485663)
chr4 (107-209)||(752934-753037)
chr4 (106-166)||(2361975-2362035)
chr4 (103-190)||(16303263-16303351)
chr4 (112-205)||(20633444-20633535)
chr4 (106-166)||(38847012-38847072)
chr4 (106-157)||(12797338-12797388)
chr4 (106-196)||(40179636-40179727)
chr4 (106-172)||(42640519-42640588)
chr4 (102-165)||(51701258-51701321)
chr4 (102-172)||(4383361-4383430)
chr4 (107-175)||(715608-715677)
chr4 (107-172)||(47263979-47264044)
chr4 (106-166)||(8423718-8423778)
chr4 (124-199)||(24343472-24343548)
chr4 (97-209)||(5775349-5775464)
chr4 (106-157)||(16073403-16073453)
chr4 (124-167)||(22440618-22440661)
chr4 (102-157)||(30982874-30982929)
chr4 (102-159)||(28000738-28000796)
chr4 (116-209)||(28720832-28720924)
chr4 (114-191)||(40481610-40481687)
chr4 (106-151)||(6879465-6879510)
chr4 (124-165)||(24999044-24999085)
chr4 (124-196)||(36635292-36635365)
chr4 (106-166)||(4672085-4672145)
chr4 (102-197)||(5414168-5414264)
chr4 (102-166)||(11931279-11931343)
chr4 (138-209)||(12628617-12628688)
chr4 (130-197)||(20521873-20521941)
chr4 (107-197)||(847918-848009)
chr4 (124-159)||(903928-903963)
chr4 (106-157)||(4157158-4157208)
chr4 (142-209)||(7251663-7251725)
chr4 (106-157)||(15029773-15029824)
chr4 (102-172)||(22234886-22234957)
chr4 (114-157)||(37203272-37203315)
chr4 (119-157)||(14465088-14465126)
chr4 (180-209)||(482306-482335)
chr4 (102-147)||(12708165-12708210)
chr4 (116-165)||(18844483-18844532)
chr4 (102-147)||(19312353-19312398)
chr4 (105-166)||(31800477-31800538)
chr4 (111-172)||(40613443-40613504)
chr4 (106-146)||(4157455-4157495)
chr4 (124-172)||(12077821-12077869)
chr4 (124-172)||(20743296-20743344)
chr4 (121-157)||(30522930-30522966)
chr4 (102-170)||(30838205-30838273)
chr4 (106-166)||(34306804-34306863)
chr4 (103-167)||(38148722-38148786)
[»] chr1 (96 HSPs)
chr1 (102-205)||(6612167-6612271)
chr1 (102-205)||(1486705-1486809)
chr1 (101-209)||(24577181-24577284)
chr1 (106-209)||(38078661-38078766)
chr1 (97-172)||(113292-113367)
chr1 (102-199)||(40917716-40917812)
chr1 (102-205)||(31694706-31694810)
chr1 (61-192)||(5376448-5376587)
chr1 (106-209)||(5927340-5927444)
chr1 (103-210)||(15323117-15323225)
chr1 (124-198)||(398783-398858)
chr1 (107-166)||(40258934-40258993)
chr1 (110-203)||(48040465-48040560)
chr1 (102-199)||(47989463-47989560)
chr1 (106-199)||(22881616-22881704)
chr1 (102-166)||(1704988-1705052)
chr1 (106-205)||(42359449-42359549)
chr1 (102-197)||(5944248-5944346)
chr1 (106-165)||(22515887-22515946)
chr1 (111-209)||(31014998-31015097)
chr1 (106-184)||(46348383-46348462)
chr1 (106-172)||(9103633-9103698)
chr1 (106-156)||(18337338-18337388)
chr1 (111-191)||(48450592-48450673)
chr1 (103-206)||(10572586-10572690)
chr1 (101-196)||(20157345-20157441)
chr1 (106-166)||(31672895-31672955)
chr1 (61-209)||(35702543-35702686)
chr1 (108-166)||(1864882-1864940)
chr1 (106-172)||(19058856-19058922)
chr1 (108-166)||(21378577-21378635)
chr1 (103-165)||(25272482-25272544)
chr1 (107-172)||(1815250-1815315)
chr1 (107-199)||(2896122-2896215)
chr1 (102-165)||(17778549-17778609)
chr1 (106-166)||(51410023-51410084)
chr1 (118-197)||(16297295-16297375)
chr1 (102-205)||(38503279-38503383)
chr1 (114-199)||(13011223-13011310)
chr1 (103-157)||(6332679-6332732)
chr1 (102-172)||(9629896-9629966)
chr1 (107-157)||(18190109-18190159)
chr1 (110-169)||(18471294-18471355)
chr1 (107-157)||(28273089-28273139)
chr1 (106-172)||(37598825-37598890)
chr1 (104-184)||(18556454-18556535)
chr1 (101-167)||(30173757-30173825)
chr1 (107-172)||(36878454-36878519)
chr1 (102-155)||(44482240-44482293)
chr1 (61-140)||(2218264-2218346)
chr1 (103-147)||(6427482-6427526)
chr1 (101-157)||(9828052-9828108)
chr1 (124-172)||(12443478-12443526)
chr1 (108-172)||(13997876-13997940)
chr1 (102-166)||(17754310-17754374)
chr1 (106-209)||(39130767-39130871)
chr1 (106-166)||(41877470-41877530)
chr1 (130-200)||(1262848-1262919)
chr1 (102-157)||(7918207-7918262)
chr1 (113-172)||(14359529-14359587)
chr1 (123-182)||(23652982-23653041)
chr1 (127-166)||(23738677-23738716)
chr1 (112-155)||(30359398-30359441)
chr1 (106-184)||(52903229-52903308)
chr1 (102-191)||(6427323-6427413)
chr1 (108-166)||(32434718-32434776)
chr1 (112-205)||(3490396-3490484)
chr1 (124-188)||(16927203-16927268)
chr1 (102-155)||(25361896-25361949)
chr1 (106-209)||(30749797-30749899)
chr1 (106-209)||(30771248-30771350)
chr1 (108-157)||(32461465-32461514)
chr1 (102-147)||(35919272-35919317)
chr1 (124-172)||(34257928-34257976)
chr1 (124-195)||(34298405-34298477)
chr1 (107-166)||(5898267-5898326)
chr1 (111-205)||(10577740-10577835)
chr1 (121-199)||(15641045-15641124)
chr1 (124-198)||(19324528-19324603)
chr1 (107-209)||(19562622-19562724)
chr1 (103-150)||(34371728-34371775)
chr1 (106-157)||(40181879-40181930)
chr1 (105-155)||(2283676-2283726)
chr1 (128-158)||(9449030-9449060)
chr1 (106-172)||(21530682-21530748)
chr1 (107-157)||(27471567-27471617)
chr1 (105-147)||(28663626-28663668)
chr1 (124-165)||(12611966-12612007)
chr1 (105-146)||(15449231-15449272)
chr1 (106-147)||(21620973-21621014)
chr1 (106-166)||(24334705-24334766)
chr1 (113-166)||(29144365-29144418)
chr1 (106-189)||(9709795-9709879)
chr1 (124-172)||(17831549-17831597)
chr1 (124-172)||(22794096-22794144)
chr1 (61-140)||(48547939-48548019)
[»] scaffold0021 (1 HSPs)
scaffold0021 (109-205)||(130441-130538)
[»] scaffold0053 (1 HSPs)
scaffold0053 (106-205)||(8757-8857)
[»] scaffold0018 (2 HSPs)
scaffold0018 (102-209)||(178814-178923)
scaffold0018 (113-203)||(192256-192346)
[»] scaffold0003 (1 HSPs)
scaffold0003 (103-199)||(241559-241656)
[»] scaffold0306 (1 HSPs)
scaffold0306 (106-209)||(13355-13459)
[»] scaffold0171 (2 HSPs)
scaffold0171 (102-209)||(23376-23483)
scaffold0171 (105-166)||(23509-23571)
[»] scaffold0152 (1 HSPs)
scaffold0152 (106-209)||(21868-21972)
[»] scaffold0652 (1 HSPs)
scaffold0652 (106-205)||(462-562)
[»] scaffold0050 (1 HSPs)
scaffold0050 (106-168)||(70275-70337)
[»] scaffold0025 (1 HSPs)
scaffold0025 (103-163)||(23771-23832)
[»] scaffold0020 (1 HSPs)
scaffold0020 (61-209)||(135264-135416)
[»] scaffold0136 (1 HSPs)
scaffold0136 (103-166)||(3846-3909)
[»] scaffold0103 (1 HSPs)
scaffold0103 (114-184)||(51791-51862)
[»] scaffold0019 (1 HSPs)
scaffold0019 (102-209)||(71684-71788)
[»] scaffold0044 (1 HSPs)
scaffold0044 (90-208)||(53140-53256)
[»] scaffold0008 (1 HSPs)
scaffold0008 (102-205)||(263368-263472)
[»] scaffold0007 (1 HSPs)
scaffold0007 (112-199)||(225274-225362)
[»] scaffold0011 (1 HSPs)
scaffold0011 (107-174)||(17750-17817)
[»] scaffold0122 (2 HSPs)
scaffold0122 (102-199)||(8631-8729)
scaffold0122 (106-172)||(8003-8068)
[»] scaffold0361 (1 HSPs)
scaffold0361 (115-172)||(14523-14580)
[»] scaffold0236 (1 HSPs)
scaffold0236 (103-172)||(25765-25834)
[»] scaffold0066 (1 HSPs)
scaffold0066 (118-209)||(33375-33459)
[»] scaffold0793 (1 HSPs)
scaffold0793 (107-209)||(4884-4987)
[»] scaffold0722 (1 HSPs)
scaffold0722 (106-170)||(7032-7096)
[»] scaffold1528 (1 HSPs)
scaffold1528 (102-166)||(1034-1098)
[»] scaffold0450 (1 HSPs)
scaffold0450 (102-166)||(8631-8695)
[»] scaffold0168 (1 HSPs)
scaffold0168 (61-199)||(21008-21148)
[»] scaffold0126 (1 HSPs)
scaffold0126 (102-184)||(19125-19207)
[»] scaffold0083 (1 HSPs)
scaffold0083 (106-191)||(45530-45617)
[»] scaffold0004 (3 HSPs)
scaffold0004 (113-172)||(92800-92859)
scaffold0004 (107-164)||(123626-123686)
scaffold0004 (105-153)||(83172-83220)
[»] scaffold0246 (1 HSPs)
scaffold0246 (114-191)||(19549-19626)
[»] scaffold0110 (1 HSPs)
scaffold0110 (102-176)||(28839-28913)
[»] scaffold0049 (2 HSPs)
scaffold0049 (107-157)||(63781-63831)
scaffold0049 (60-89)||(57024-57053)
[»] scaffold0036 (1 HSPs)
scaffold0036 (103-157)||(9744-9798)
[»] scaffold0123 (1 HSPs)
scaffold0123 (102-153)||(44521-44572)
[»] scaffold0697 (1 HSPs)
scaffold0697 (106-172)||(1637-1703)
[»] scaffold0227 (1 HSPs)
scaffold0227 (114-172)||(7319-7377)
[»] scaffold0051 (1 HSPs)
scaffold0051 (106-176)||(45608-45678)
[»] scaffold0086 (1 HSPs)
scaffold0086 (102-147)||(2946-2991)
[»] scaffold0598 (1 HSPs)
scaffold0598 (124-172)||(8071-8119)
[»] scaffold0116 (1 HSPs)
scaffold0116 (106-205)||(9857-9957)


Alignment Details
Target: chr5 (Bit Score: 340; Significance: 0; HSPs: 74)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 18 - 434
Target Start/End: Original strand, 13287311 - 13287736
Alignment:
Q  18 gttaatatctggttttagcattgttcttaaatcctcatcaatgtatgaagcacaaacactcctcagattaggcatgtccgacaggacacgacaccgacac 117  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  13287311 gttaatatctgattttagcattgttcttaaatcctcatcaatgtatgaagcacatacactcctcagattaggcgtgtccgacaggacacgacaccgacac 13287410  T
Q  118 ttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgt------ccgtatccgtgcttt 210  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||      |||||||||||||||    
T  13287411 ttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttt 13287510  T
Q  211 cataggtagtaagtaataggaacttgacctttttcatgcgaactccttggaggctaagctccagttgactctctaggtcttgtaggtttctgatactcaa 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  13287511 cataggtagtaagtaataggaacttgacctttttcatgcgaactccttgtaggctaagttccagctgactctctaggtcttgtaggtttctgatactcaa 13287610  T
Q  311 accataaagctgttctcccatcaactgcctatgagctcaaaatgttagtgttctcatacatggagcttaatgaatagaaatattg--aaaaaatgctgaa 408  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||    
T  13287611 accataaagctgttctcccatcaattgcctatgagctcaaaatgttagtgctctcatacaaggagcttaatgaatagaaatattgaaaaaaaatgctgaa 13287710  T
Q  409 tgaattagttgaaggttgtacctatg 434  Q
    ||||||||||||||||| ||||||||    
T  13287711 tgaattagttgaaggttttacctatg 13287736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 106 - 205
Target Start/End: Original strand, 21191056 - 21191156
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| | ||| ||| |||||||||||||||||||| || ||||    
T  21191056 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccggtgtcagtgtccg 21191155  T
Q  205 t 205  Q
    |    
T  21191156 t 21191156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 106 - 215
Target Start/End: Complemental strand, 6247681 - 6247572
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||| ||||| ||| | ||| |||||||||||||||| |||||    
T  6247681 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtgtccgcatccg 6247582  T
Q  205 tgctttcatag 215  Q
    || ||||||||    
T  6247581 tg-tttcatag 6247572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 21522813 - 21522709
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    ||||||||||||||| ||||| |||||||||||||||| ||||||| ||||||||| |||||||| ||||| ||| |||||||||||||||||| ||||     
T  21522813 gacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtg 21522714  T
Q  201 tccgt 205  Q
    |||||    
T  21522713 tccgt 21522709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 21533379 - 21533275
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    ||||||||||||||| ||||| |||||||||||||||| ||||||| ||||||||| |||||||| ||||| ||| |||||||||||||||||| ||||     
T  21533379 gacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtg 21533280  T
Q  201 tccgt 205  Q
    |||||    
T  21533279 tccgt 21533275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 22013455 - 22013369
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    ||||||| |||||||| |||||| |||||||||| |||||||| ||||| ||| |||||||||||||||||||||||||||||||||    
T  22013455 ttacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgctt 22013369  T

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Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 102 - 209
Target Start/End: Original strand, 37328840 - 37328948
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    |||||||||||||||| |||| |||||||||||| |||||||||| |||||||||  ||||||||  || | ||| |||||||||||| ||||||||||     
T  37328840 gacacgacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgttcggtgtccgtg 37328939  T
Q  201 tccgtgctt 209  Q
    |||||||||    
T  37328940 tccgtgctt 37328948  T

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Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 106 - 205
Target Start/End: Complemental strand, 15382538 - 15382436
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtga--ttttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatc 202  Q
    ||||||||||||||||| ||| |||||||||| |||  |||||||||||||||| |||||||| ||||| | | ||||||||||||||||||||||| ||    
T  15382538 cgacaccgacacttgtaattatactgaattatatgattttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtc 15382439  T
Q  203 cgt 205  Q
    |||    
T  15382438 cgt 15382436  T

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Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 19552541 - 19552637
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||| |||||||| ||  |||||| ||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||| ||||| ||||    
T  19552541 gacacgacatcgacacttata--tacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgttcggtggccgt 19552637  T

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Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 31084386 - 31084296
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtcc 197  Q
    ||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||| |||||||| ||||     || ||||||||||||||||||    
T  31084386 gacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtg-----tcagtgtcgtgtccggtgtcc 31084296  T

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Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 39698604 - 39698541
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  39698604 gacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 39698541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 107 - 196
Target Start/End: Original strand, 36642763 - 36642853
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtc 196  Q
    ||||||||||||| || ||||||| || ||||| | |||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  36642763 gacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 36642853  T

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Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 24906305 - 24906390
Alignment:
Q  110 accgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtg 194  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||| | ||||| ||| | ||||||||||||||||    
T  24906305 accgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtgtcgtgtccggtg 24906390  T

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Target: chr5; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 7677768 - 7677704
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||||||||| || || ||||||||||||||||||||||||||||||| ||||||||    
T  7677768 gacacgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtcg 7677704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 61 - 176
Target Start/End: Complemental strand, 10298668 - 10298558
Alignment:
Q  61 tatgaagcacaaacactcctcagattaggcatgtccgacaggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaact 160  Q
    ||||||||||  ||||||||| |||||||| ||||||| |     ||||||||||||||||| ||||| || ||||||||| |||||||||||||||  |    
T  10298668 tatgaagcacggacactcctcggattaggcgtgtccgata-----cgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagtt 10298574  T
Q  161 gtgtcgacgtgttagt 176  Q
    |||||| |||||||||    
T  10298573 gtgtcggcgtgttagt 10298558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 19579764 - 19579669
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtc 196  Q
    ||||||||||||||||||||| || |||| |||||||||||||| ||||||||||| |||||||| ||| | ||| ||||||| || |||||||||    
T  19579764 gacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgttgtatccggtgtc 19579669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 42893418 - 42893359
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||    
T  42893418 gacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcg 42893359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 14674323 - 14674249
Alignment:
Q  111 ccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtc 184  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 21576745 - 21576803
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgt 164  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  21576745 cgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 21576803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 101 - 218
Target Start/End: Complemental strand, 2436986 - 2436875
Alignment:
Q  101 ggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgta 200  Q
    ||||||||||||||||| | || | |||  |||||||||||||||| |||||||||| | |||||| ||||     || |||||||||||||||||||||    
T  2436986 ggacacgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtg-----tcagtgtcgtgtccggtgtccgta 2436892  T
Q  201 tccgtgctttcataggta 218  Q
    ||||||| ||||||||||    
T  2436891 tccgtgc-ttcataggta 2436875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 21542093 - 21541989
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    ||||||||||||||||||||| |||||||||||||||| || |||| |||||||||  ||||||| | ||| | | || |||||||||| |||||||||     
T  21542093 gacacgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcggcatgtcaatgtctgtgtcgtgtctggtgtccgtg 21541994  T
Q  201 tccgt 205  Q
    |||||    
T  21541993 tccgt 21541989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 7218271 - 7218333
Alignment:
Q  110 accgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||| || |||||||||||    
T  7218271 accgacacttgtaattacactgaattatgtgatttatttaaattattagctctgtcgacgtgt 7218333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 8420086 - 8420020
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||||||||||| ||||| |||||||||| ||||||||||||||||| || ||||| |||||    
T  8420086 cgacaccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtcggcgtgt 8420020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 16374338 - 16374412
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt 176  Q
    |||||||||||||||| |||| ||||||||| |||||| |||||||  ||||||||||  |||||||||||||||    
T  16374338 gacacgacaccgacacatgtaattacactgatttatgttatttttttcaattattaacgatgtcgacgtgttagt 16374412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 33178084 - 33178018
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||||||||||| ||||||| |||||||||||||||| |||||||||  ||||||| |||||    
T  33178084 cgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgt 33178018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 19820396 - 19820498
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    |||||||||||||| || ||  ||| |||||||  ||||| ||||||||||| | ||||||  |||| ||| ||||||||||||||||||||||||||||    
T  19820396 cgacaccgacacttataattgtacttaattatg--attttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgtatccg 19820493  T
Q  205 tgctt 209  Q
    |||||    
T  19820494 tgctt 19820498  T

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Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 40000555 - 40000640
Alignment:
Q  126 acactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgcttt 210  Q
    |||||||||||||||||||||||||||||||||  |||||||| ||| ||| ||||||||||  ||  | ||||||||||||||||    
T  40000555 acactgaattatgtgattttttcaaattattaagagtgtcgacatgtcagtgtccgtgtcgtacccaatatccgtatccgtgcttt 40000640  T

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Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 41633795 - 41633734
Alignment:
Q  105 acgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||| ||||| |||||||||||||||| | ||||||||||||||| ||||||||    
T  41633795 acgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgtcg 41633734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 21351901 - 21351965
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||| ||||||||  |||||||    
T  21351901 gacatgacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcg 21351965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 30135380 - 30135277
Alignment:
Q  99 caggacacgacaccgacacttgtagttacactgaattatgtgatt-ttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtc 196  Q
    ||||||| |||||||||||||||| ||||| ||| |||||||||| ||||||||||||||  ||||||| |||||  || || ||||||||||| |||||    
T  30135380 caggacatgacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtcggcgtgtcggtatctgtgtcgtgtcc-gtgtc 30135282  T
Q  197 cgtat 201  Q
    |||||    
T  30135281 cgtat 30135277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 43001856 - 43001780
Alignment:
Q  109 caccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtc 184  Q
    |||| ||||||||| |||||||||||||||| ||||||||||||||||| | |||||||| ||| ||| ||||||||    
T  43001856 caccaacacttgtaattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtgtc 43001780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 5894829 - 5894884
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||||||||||||||| | | |||||| |||||||||||||||||||    
T  5894829 gacacgacaccgacacttgtagttagattaaattatatgattttttcaaattatta 5894884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 6326304 - 6326391
Alignment:
Q  113 gacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||||| |||||||||||||||| ||||| |||||||| || |  ||||| ||||| ||| ||||||||||||||||| |||||    
T  6326304 gacacttgtaattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgt 6326391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 28588674 - 28588740
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||| | || |||||||||||||||||||||| ||||||||||| | |||||| |||||    
T  28588674 cgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgt 28588740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 36838656 - 36838551
Alignment:
Q  54 atcaatgtatgaagcacaaacactcctcagattaggcatgtccgacagga--cacgacaccgacacttgtagttacactgaattatgtgattttttcaaa 151  Q
    |||||| ||||||||||| ||||||||  |||||||| |||| ||||  |  |||||||||||||| | || ||||||| |||||||| ||||| |||||    
T  36838656 atcaatctatgaagcacagacactccttggattaggcgtgtcggacaccaaacacgacaccgacacatataattacactaaattatgtaattttctcaaa 36838557  T
Q  152 ttatta 157  Q
    ||||||    
T  36838556 ttatta 36838551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 4105310 - 4105222
Alignment:
Q  114 acacttgtagttacactgaattatgtga--ttttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||  | ||||| ||||| ||| |||||||| |||||||| |||||    
T  4105310 acacttgtaattacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtcagtatccgtgtcatgtccggtatccgt 4105222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 12641736 - 12641667
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||| ||||| || | ||| ||| |||||||||||||||| |||||||||||| |||||||||||    
T  12641736 acacgacactgacacgtgcaattatactaaattatgtgatttttttaaattattaactatgtcgacgtgt 12641667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 15884047 - 15884006
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgatttttt 147  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  15884047 cgacaccgacacttgtaattacactgaattatgtgatttttt 15884006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 3966566 - 3966502
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||||||| | || |||||||||||| ||||||||| ||||||||||| | ||||||    
T  3966566 gacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcg 3966502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 17177025 - 17177081
Alignment:
Q  108 acaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgt 164  Q
    ||||||||||||||| ||||| |||||| | ||||||||||||||||||| ||||||    
T  17177025 acaccgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgt 17177081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 15405062 - 15405138
Alignment:
Q  113 gacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtcc 190  Q
    |||||||||| ||||| |||||||| |||||||||||||||||||  ||||||   |||||||| ||||||||||||||    
T  15405062 gacacttgtaattacattgaattatatgattttttcaaattattagttgtgtc--agtgttagtgtccgtgtcgtgtcc 15405138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 196
Target Start/End: Original strand, 16203795 - 16203886
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtc 196  Q
    |||||||||||| | || ||||||| ||||||| |||||| ||||||||||| | |||||| | ||||||| |||||||| ||| |||||||    
T  16203795 cgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtgtcatgttcggtgtc 16203886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 30183611 - 30183548
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||||||||||| ||| || |||| ||||||| ||||||||||||||  |||||||    
T  30183611 acacgacaccgacacttgtaattaaaccgaataatgtgatattttcaaattattagttgtgtcg 30183548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 6471886 - 6471940
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||| |||| | || |||||||||||||||||||||| |||||||||||    
T  6471886 acacgacacccacacatataattacactgaattatgtgattttctcaaattatta 6471940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 22423765 - 22423863
Alignment:
Q  61 tatgaagcacaaacactcctcagattaggcatgtcc-gacag-gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||  ||||||||| |||||||| ||||| ||||  |||||||||||||||  | || ||| | |||||||||||||||| |||||||||||    
T  22423765 tatgaagcacggacactcctcggattaggcgtgtccagacaccgacacgacaccgacatatataattatattgaattatgtgattttctcaaattatta 22423863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 41995512 - 41995430
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgt 205  Q
    ||||| ||||||||||||||||||| ||||||||  ||||||| ||||| ||| || ||||||| ||| |||||||| |||||    
T  41995512 ttacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgtatccagtgtccgtgtccgt 41995430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 42469262 - 42469176
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    ||||||| || ||||| ||||| ||||||||||| | |||||| ||||| | | |||||||||||| |||||||||| |||||||||    
T  42469262 ttacactaaaatatgtcattttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtccgtgtccgtgctt 42469176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 125 - 205
Target Start/End: Complemental strand, 6770583 - 6770502
Alignment:
Q  125 tacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgt 205  Q
    ||||||||||||||||||||| | |||||||||  ||||||   |||| ||| |||||||| ||| ||||||||||||||||    
T  6770583 tacactgaattatgtgattttcttaaattattagttgtgtcagtgtgtcagtgtccgtgtcatgttcggtgtccgtatccgt 6770502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 24273048 - 24273089
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    |||||||||||||||||||||| |||||||| ||||||||||    
T  24273048 ttacactgaattatgtgattttctcaaattaataactgtgtc 24273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 24389166 - 24389125
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    |||||||||||||||||||||| |||||||| ||||||||||    
T  24389166 ttacactgaattatgtgattttctcaaattaataactgtgtc 24389125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 43564940 - 43564891
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattat 155  Q
    |||||||||||||| || ||||||| ||||||||||||||| ||||||||    
T  43564940 cgacaccgacacttataattacactaaattatgtgatttttccaaattat 43564891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 4344783 - 4344731
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt 176  Q
    |||||||||||||||| ||||||||||||||||| | |||||  |||||||||    
T  4344783 ttacactgaattatgtcattttttcaaattattatcggtgtcagcgtgttagt 4344731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 12199992 - 12199948
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgatttttt 147  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||    
T  12199992 acacgacaccgacacttgtaattgtactgaattatgtgatttttt 12199948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 40131681 - 40131629
Alignment:
Q  105 acgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||| | || || ||| ||||||||||||||||||||||||||||||    
T  40131681 acgacaccgatatttataattaaactgaattatgtgattttttcaaattatta 40131629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 170
Target Start/End: Complemental strand, 12280494 - 12280447
Alignment:
Q  123 gttacactgaattatgtgattttttcaaattattaactgtgtcgacgt 170  Q
    ||||||||||||||| |||| ||||||||||||||||| ||| |||||    
T  12280494 gttacactgaattatatgatcttttcaaattattaactatgttgacgt 12280447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 22299492 - 22299578
Alignment:
Q  117 cttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatcc 203  Q
    |||||| ||| ||||||| |||||||||||| ||||||||| ||||||||  |||| | | |||||||||| |||||||||| |||||    
T  22299492 cttgtaattatactgaatcatgtgatttttt-aaattattagctgtgtcggtgtgtcaatatccgtgtcgtatccggtgtccatatcc 22299578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 30502388 - 30502439
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||||| | || ||||||||||||| |||||||| |||||||||||    
T  30502388 cgacaccgacacatataattacactgaattaagtgattttctcaaattatta 30502439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 30542731 - 30542782
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||||| | || ||||||||||||| |||||||| |||||||||||    
T  30542731 cgacaccgacacatataattacactgaattaagtgattttctcaaattatta 30542782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 39205944 - 39205873
Alignment:
Q  101 ggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||| |||| | || ||||||  |||||| ||||||| ||||||||||| | ||||||||||||    
T  39205944 ggacacgacaccaacacatataattacacctaattatatgattttctcaaattattagcagtgtcgacgtgt 39205873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 41091253 - 41091308
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||| |||||| | || |||||||||||||||||||||| |||||| ||||    
T  41091253 gacacgacatcgacacatataattacactgaattatgtgattttctcaaatcatta 41091308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 8325060 - 8325142
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtc 184  Q
    |||| ||||||||||| |||  |||||| ||||||| | ||||| ||||||||| | | |||||||||||| ||| |||||||    
T  8325060 gacatgacaccgacacatgtgtttacacagaattatatcattttctcaaattatgaccggtgtcgacgtgtcagtgccgtgtc 8325142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 38749559 - 38749625
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgac 168  Q
    ||||| ||||| |||| | || ||||| |||||||||| ||||||||||||||||| | ||||||||    
T  38749559 gacacaacaccaacacatataattacattgaattatgtcattttttcaaattattatcggtgtcgac 38749625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 41558707 - 41558777
Alignment:
Q  130 tgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||||| ||||| |||||||||||  |||||| | |||| ||| |||||||||| ||||||||||||    
T  41558707 tgaattatgtcattttctcaaattattatttgtgtcaatgtgtcagtgtccgtgtcgtatccggtgtccgt 41558777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 157
Target Start/End: Original strand, 5467996 - 5468029
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||||||||||||||| |||||||||||    
T  5467996 ttacactgaattatgtgattttatcaaattatta 5468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 7175045 - 7175098
Alignment:
Q  132 aattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtc 184  Q
    |||||||||||||| ||||||||||||| ||||||| |||| ||| ||||||||    
T  7175045 aattatgtgattttctcaaattattaacggtgtcgatgtgtcagtgtccgtgtc 7175098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 19028999 - 19029066
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtga---ttttttcaaattattaactgtgtcgacgtg 171  Q
    ||||| |||||||||  |||||||| |||||||||   ||||||||||||||||||||| ||| ||||    
T  19028999 gacacagacacttgtgattacactggattatgtgatttttttttcaaattattaactgtatcggcgtg 19029066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 27932282 - 27932229
Alignment:
Q  118 ttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtg 171  Q
    ||||| |||||||||||||||| ||||| ||||||||||| | |||||| ||||    
T  27932282 ttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtg 27932229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 3751958 - 3752017
Alignment:
Q  134 ttatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggt 193  Q
    |||||||||||| |||||||||| | ||||||||| ||||||| | |||||||||||||||    
T  3751958 ttatgtgattttctcaaattatt-agtgtgtcgacttgttagtgttcgtgtcgtgtccggt 3752017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 9449513 - 9449477
Alignment:
Q  121 tagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||| |||||||||||||||| |||||||||||    
T  9449513 tagttacattgaattatgtgattttctcaaattatta 9449477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 17088348 - 17088292
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgatt-ttttcaaattatta 157  Q
    |||||||||  |||||||||| | ||||| |||||||||||| ||||||||||||||    
T  17088348 gacacgacagtgacacttgtaatcacactaaattatgtgatttttttcaaattatta 17088292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 206
Target Start/End: Complemental strand, 21814324 - 21814225
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgtat 201  Q
    |||||||||||||||| | || |||||||| ||| ||||||||| | |||  |||| |||||||| |||||     || |||||| |||||||||||| |    
T  21814324 gacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgt-----ccatgtcgtttccggtgtccgtgt 21814230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 26205778 - 26205854
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||||||||||| ||||| ||||| | ||| | || ||||||||| ||| ||| |||| ||||||||||||||    
T  26205778 ttacactgaattatgtcattttctcaaaattttatcggtatcgacgtgtcagtgtccatgtcatgtccggtgtccgt 26205854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 30098367 - 30098319
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||| |||||||||||||||| ||||||||||||| || ||| |||||    
T  30098367 ttacattgaattatgtgattttctcaaattattaacggtttcgtcgtgt 30098319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 31264479 - 31264431
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||||||| ||||| |||||||||||  |||||||| ||||    
T  31264479 ttacactgaattatgtcattttctcaaattattacttgtgtcgatgtgt 31264431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 75 - 209
Target Start/End: Complemental strand, 20261 - 20127
Alignment:
Q  75 actcctcagattaggcatgtccgacaggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtta 174  Q
    ||||||| |||||||| ||||| || | ||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||| |    
T  20261 actcctcggattaggcgtgtcccaccg-acacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtca 20163  T
Q  175 gt-tccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
     | |||||||||||||||||||||||||| ||||||    
T  20162 ttgtccgtgtcgtgtccggtgtccgtatctgtgctt 20127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 96)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 9107366 - 9107464
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||    
T  9107366 gacacgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccggtgtccgt 9107464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 16766760 - 16766656
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| ||| |||||||||||||||||||     
T  16766760 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtg 16766661  T
Q  201 tccgt 205  Q
    |||||    
T  16766660 tccgt 16766656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 102 - 218
Target Start/End: Original strand, 8365515 - 8365631
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    ||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||  ||||||| ||||| ||| ||||||||||||| ||||||||||    
T  8365515 gacacgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgta 8365614  T
Q  201 tccgtgctttcataggta 218  Q
    ||||||| ||||||||||    
T  8365615 tccgtgc-ttcataggta 8365631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 102 - 209
Target Start/End: Complemental strand, 12696387 - 12696280
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    |||||||||| |||||||||| |||||||||||||||| ||||||||||||||||| |||||||| ||||| ||| |||||||||||||| |||||||||    
T  12696387 gacacgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc-gtgtccgta 12696289  T
Q  201 tccgtgctt 209  Q
    |||||||||    
T  12696288 tccgtgctt 12696280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 5970104 - 5970202
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgtat 201  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||     |||||||| |||||||||||||| |    
T  5970104 gacacgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcgacgtg-----tccgtgtcatgtccggtgtccgtgt 5970198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 106 - 199
Target Start/End: Original strand, 426514 - 426608
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||| |||||    
T  426514 cgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgt 426608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 106 - 199
Target Start/End: Complemental strand, 34595193 - 34595099
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||| ||||| | | |||||||||||||||||||||||    
T  34595193 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 34595099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 853859 - 853960
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttag-ttccgtgtcgtgtccggtgtccgtatccg 204  Q
    ||||||||||||||||| || |||| ||||||||||||||||||||||||||  ||||||| ||||| ||  ||||||||||||||||||||||||||||    
T  853859 cgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgtatccg 853958  T
Q  205 tg 206  Q
    ||    
T  853959 tg 853960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 106 - 199
Target Start/End: Original strand, 7977830 - 7977924
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||| ||||| ||| ||| |||||||||| ||||||||    
T  7977830 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgt 7977924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 106 - 205
Target Start/End: Original strand, 8776973 - 8777073
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||||||||  ||||||| ||||| ||| ||||||||||||||| ||||||| ||||    
T  8776973 cgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgttgtccgtgtccg 8777072  T
Q  205 t 205  Q
    |    
T  8777073 t 8777073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 7938174 - 7938075
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgt 205  Q
    ||||||||||||| || ||||||| |||||| ||||||||||||||||||| |||||||| ||||| ||| ||| ||||||||||||||||||| |||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgt 7938075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 10770670 - 10770760
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccg 191  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||| | ||||| ||| ||| |||||||||||    
T  10770670 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtccg 10770760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 8714043 - 8713944
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgatttttt-caaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgta 200  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||     || |||| ||||||||||||||     
T  8714043 gacacgacacccacatttgtaattacactgaattatgtgatttttttcaaattattaactgtgtcgacgtgt-----ccatgtcatgtccggtgtccgtg 8713949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 3398680 - 3398574
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtat 201  Q
    |||||||||||| |||| || |||||||||||||| ||| ||||||||||||||| |||||||| ||||| ||| |||||||||||| || |||||||||    
T  3398680 acacgacaccgatacttataattacactgaattatatga-tttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgtat 3398582  T
Q  202 ccgtgctt 209  Q
    || |||||    
T  3398581 ccatgctt 3398574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 111 - 209
Target Start/End: Complemental strand, 31959213 - 31959115
Alignment:
Q  111 ccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||| ||||| || ||||| ||| | |||||| ||||| ||||||||||||||||||    
T  31959213 ccgacacttgtaattacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtgttcgtgtcatgtcc-gtgtccgtatccgtgctt 31959115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 106 - 199
Target Start/End: Complemental strand, 3209441 - 3209347
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgatttttt-caaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||||||||| | ||||| |||||||||||||||| |||||||||| |||||||| |||||  ||  |||||||||||||||||||||    
T  3209441 cgacaccgacacttgtaataacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtctgtgtcgtgtcgtgtccggtgtccgt 3209347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 7801156 - 7801226
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt 176  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||  ||||||| |||||||||    
T  7801156 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagt 7801226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 101 - 205
Target Start/End: Complemental strand, 9027242 - 9027137
Alignment:
Q  101 ggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||||||||| | || |||||| ||||||||||||| | ||||||||||| | |||||| ||||| ||| |||||||||||||||| ||||||    
T  9027242 ggacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgt 9027143  T
Q  200 atccgt 205  Q
     |||||    
T  9027142 gtccgt 9027137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 4118341 - 4118433
Alignment:
Q  114 acacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgt 205  Q
    ||||||||| ||||| | ||||||||||||||||||||||||||||| | ||| ||||||| | | ||||||||||||||||||||| |||||    
T  4118341 acacttgtaattacatttaattatgtgattttttcaaattattaactatatcgtcgtgttaatatacgtgtcgtgtccggtgtccgtgtccgt 4118433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 102 - 209
Target Start/End: Complemental strand, 7930368 - 7930260
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    ||||||||||||||||||| | || |||| ||||||||||||||||||||||||||| ||||||| | ||| ||| |||||   |||||||||||| |||    
T  7930368 gacacgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtccgttctgtgtccggtgtctgta 7930269  T
Q  201 tccgtgctt 209  Q
    ||| |||||    
T  7930268 tccatgctt 7930260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 61 - 164
Target Start/End: Original strand, 9911483 - 9911587
Alignment:
Q  61 tatgaagcacaaacactcctcagattaggcatgtccgacaggacacgacaccgacacttgtagttacactgaattatgtgattt-tttcaaattattaac 159  Q
    |||||||||  |||||||||| |||||||| |||||     ||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||| |    
T  9911483 tatgaagcatgaacactcctcggattaggcgtgtcctggttgacacgacaccgacacttgtaattacactgaattatgtgatttcttttaaattattagc 9911582  T
Q  160 tgtgt 164  Q
    |||||    
T  9911583 tgtgt 9911587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 108 - 191
Target Start/End: Complemental strand, 16833365 - 16833281
Alignment:
Q  108 acaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccg 191  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||  ||||||| ||||| ||| || ||||||||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtccg 16833281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 403864 - 403915
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  403864 cgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 107 - 189
Target Start/End: Original strand, 15489733 - 15489816
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtc 189  Q
    |||||||||||||||| ||||| |||||| ||| |||||||||||||||||  ||||||||||||||||| ||||||| |||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccgtgttgtgtc 15489816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 17841589 - 17841668
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtc 184  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||    
T  17841589 cgacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 17841668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 103 - 205
Target Start/End: Complemental strand, 31384982 - 31384879
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtat 201  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||  ||| || || ||  ||| ||||| || ||| ||||||||||||    
T  31384982 acacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagttgtatcaacatgccagtatccgtatcatgttcggtgtccgtat 31384883  T
Q  202 ccgt 205  Q
    ||||    
T  31384882 ccgt 31384879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 112 - 196
Target Start/End: Complemental strand, 1681811 - 1681726
Alignment:
Q  112 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtc 196  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||  ||||||| ||||||||| |  ||||||||| |||||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgtatgtgtcgtgttcggtgtc 1681726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 9522954 - 9522899
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  9522954 gacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattatta 9522899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 28152157 - 28152079
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtc 184  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||| || ||||| ||||| ||| ||||||||    
T  28152157 cgacaccgacacttgtaattacactgaattatgtgat-ttttcaaattattagctttgtcggcgtgtcagtgtccgtgtc 28152079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 28715354 - 28715303
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  28715354 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattatta 28715303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 199
Target Start/End: Original strand, 5732510 - 5732604
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||||||| | || ||||||| || ||||||||||| ||||||||||||| |||||| ||||| ||| ||| |||||||||| ||||||||    
T  5732510 cgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgt 5732604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 2117174 - 2117084
Alignment:
Q  61 tatgaagcacaaacactcctcagattaggcatgtccgacaggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||  ||||||||| |||||||||||||||||| ||||||||||      || || || || ||||||||||||||||||||||||||||    
T  2117174 tatgaagcacggacactcctccgattaggcatgtccgacacgacacgacac------ttataattgcattgaattatgtgattttttcaaattatta 2117084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 17341671 - 17341767
Alignment:
Q  113 gacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    ||||||| || |||||||||||||||||||||| ||||||||||||| |||||| ||||| |||  |||||||||| | |||||| || |||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtgcccgtgtcgtg-caggtgtctgtgtccgtgctt 17341767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 4878002 - 4877895
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtga-ttttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccg--gtgtccgtat 201  Q
    ||||||||||||||||| ||| ||| |||||||||| |||||||||||||||| ||||||||  |||| | | |||||||||||| ||  ||||||||||    
T  4878002 cgacaccgacacttgtaattatacttaattatgtgacttttttcaaattattagctgtgtcggtgtgtcactatccgtgtcgtgttcggcgtgtccgtat 4877903  T
Q  202 ccgtgctt 209  Q
    | ||||||    
T  4877902 ctgtgctt 4877895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 9025489 - 9025545
Alignment:
Q  101 ggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||||||| | || |||||||||||||||||||||| |||||||||||    
T  9025489 ggacacgacaccgacacatataattacactgaattatgtgattttctcaaattatta 9025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 209
Target Start/End: Original strand, 25038075 - 25038175
Alignment:
Q  110 accgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgct 208  Q
    ||||||| ||||| ||||||| |||||||| ||||| ||||||||||||| ||||| |||||| ||| || ||||||| | |  ||||||||||||||||    
T  25038075 accgacatttgtaattacactaaattatgtaattttctcaaattattaacggtgtcaacgtgtcagtatctgtgtcgtattcaatgtccgtatccgtgct 25038174  T
Q  209 t 209  Q
    |    
T  25038175 t 25038175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 32978899 - 32978966
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtg-attttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||||||||||| ||||||| |||||||||  |||||||||||||||| |||||||| |||||    
T  32978899 cgacaccgacacttgtaattacacttaattatgtgttttttttcaaattattagctgtgtcggcgtgt 32978966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 1191706 - 1191760
Alignment:
Q  112 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||||| ||||||||    
T  1191706 cgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtcg 1191760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 6389784 - 6389698
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    ||||||| |||||| | ||||| ||||||||||| | |||||| ||||| ||| |||||||||||||||||||| || |||||||||    
T  6389784 ttacactaaattatatcattttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgtgtccgtgctt 6389698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 9629457 - 9629351
Alignment:
Q  92 tgtccgacaggacac-gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtc 189  Q
    ||||||||| ||||| ||||||||||| | || ||||| |||||||||||||||| ||||||||||  | |||||| ||||| | | |||||||||||||    
T  9629457 tgtccgacacgacaccgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtc 9629358  T
Q  190 cggtgtc 196  Q
    | |||||    
T  9629357 cagtgtc 9629351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 9658920 - 9658835
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    |||||||||||||||||||||| | ||||||||| | |||||| ||||| ||| |||||||||||| | ||||| ||||||||||||    
T  9658920 ttacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgt-ctgtgtctgtatccgtgctt 9658835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 114 - 191
Target Start/End: Complemental strand, 17435250 - 17435172
Alignment:
Q  114 acacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccg 191  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||| || ||||||||| | ||| |||||||||| ||||    
T  17435250 acacttgtaattacactgaattatgtaattttttaaaattattagctatgtcgacgtatcagtgtccgtgtcgtatccg 17435172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 24645539 - 24645477
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgatt-ttttcaaattattaactgtgtcgac 168  Q
    ||||||||||||||||  || |||||||||||||||| |||||||||||||| ||||||||||    
T  24645539 gacaccgacacttgtaactatactgaattatgtgatttttttcaaattattagctgtgtcgac 24645477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 5000648 - 5000720
Alignment:
Q  128 actgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||| |||||||||| || |||||||| | |||||||||||| ||| |||||||| ||||||||||||||    
T  5000648 actgaatcatgtgattttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtccgt 5000720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 6327518 - 6327577
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    ||||| ||||||||||| ||||||| |||||| | |||||||||||||||||||| ||||    
T  6327518 cgacatcgacacttgtaattacacttaattatataattttttcaaattattaactatgtc 6327577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 6898281 - 6898332
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||||||| ||||||| |||||||| |||| ||||||||||||    
T  6898281 cgacaccgacacttgtaattacacttaattatgtaatttgttcaaattatta 6898332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 7265593 - 7265644
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||||| | || |||||||||||||||||||||| |||||||||||    
T  7265593 cgacaccgacacatataattacactgaattatgtgattttctcaaattatta 7265644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 18367899 - 18367796
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgtat 201  Q
    |||||||||||||||| | || |||||||| ||| ||||||||| | |||  |||| |||||||| |||||    ||| ||||||||||||||||||| |    
T  18367899 gacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtcgtgtccatgtcgtgtccggtgtccgtgt 18367800  T
Q  202 ccgt 205  Q
    ||||    
T  18367799 ccgt 18367796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 21395304 - 21395358
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||||||||||| ||||||| |||||||| ||||| |||||||||||    
T  21395304 gacacgacaccgacacttgtaattacactaaattatgt-attttctcaaattatta 21395358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 7086858 - 7086788
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||| |||||||||| | || ||||||| |||||||||||||| ||||||||||| | ||| ||||||||    
T  7086858 gacactacaccgacacatataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgt 7086788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 188
Target Start/End: Complemental strand, 13851794 - 13851712
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgt 188  Q
    |||| |||||| | || ||||||||||||| || ||||| ||||||||||| | |||||||||||| ||| ||||||||||||    
T  13851794 gacatcgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 19040411 - 19040345
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||| ||||| | || |||||||||||||||||||||| ||||||||||| | |||||| |||||    
T  19040411 cgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgt 19040345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 23771637 - 23771572
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||||| ||||| |||||||||| ||| | ||||||| |||||||||||||||||| |||||    
T  23771637 cgacaccgacatttgtaattacactgaagtatataatttttt-aaattattaactgtgtcggcgtgt 23771572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 25010212 - 25010262
Alignment:
Q  116 acttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||| | || ||||||||||||||||||||||||||||| ||||||||    
T  25010212 acttgtaataacgctgaattatgtgattttttcaaattattagctgtgtcg 25010262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 26562752 - 26562682
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||| |||||| | || |||||||||||||||||||||| ||||||| ||| | |||||| |||||    
T  26562752 gacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgt 26562682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 33001289 - 33001355
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||| | || ||||| | |||||||||||||||||||||||||| | |||||| |||||    
T  33001289 cgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgt 33001355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 34073343 - 34073441
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||||||||| | | || ||||||||||||||| |||||| ||||||||||| |  ||| | | ||| ||| |||||||||||||| ||||||||    
T  34073343 gacacgacaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagtgtccgt 34073441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 1700411 - 1700362
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattat 155  Q
    |||||||||||||| || |||||||||| ||||||||||||| |||||||    
T  1700411 cgacaccgacacttataattacactgaaatatgtgatttttttaaattat 1700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 7151473 - 7151420
Alignment:
Q  104 cacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||| |||| | || ||||||| ||||||||||||||||||||||||||    
T  7151473 cacgacaccaacacatataattacacttaattatgtgattttttcaaattatta 7151420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 12868706 - 12868762
Alignment:
Q  137 tgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccg 198  Q
    |||||||||||||||||||||||||||||| ||||     || |||||||||||||||||||    
T  12868706 tgtgattttttcaaattattaactgtgtcggcgtg-----tcagtgtcgtgtccggtgtccg 12868762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 9617494 - 9617442
Alignment:
Q  105 acgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||| | || ||||| |||||||||||||||| |||||||||||    
T  9617494 acgacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 10842573 - 10842525
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||| |||||||||||||||||||||||||| | |||||| |||||    
T  10842573 ttacactaaattatgtgattttttcaaattattagcggtgtcggcgtgt 10842525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 16388251 - 16388283
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattatt 156  Q
    |||||||||||||||||||||||||||||||||    
T  16388251 ttacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 17168938 - 17168886
Alignment:
Q  121 tagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtt 173  Q
    |||||||| |||||||||| ||||||||||||||||| |  ||||||||||||    
T  17168938 tagttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtt 17168886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 17302620 - 17302564
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgatt-ttttcaaattatta 157  Q
    |||||||||  |||||||||| ||||| |||||||||||||| ||||||||||||||    
T  17302620 gacacgacaatgacacttgtaattacattgaattatgtgatttttttcaaattatta 17302564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 31579243 - 31579283
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgt 164  Q
    |||||||||||||||||||||| ||||||||||||| ||||    
T  31579243 ttacactgaattatgtgattttctcaaattattaacggtgt 31579283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 7973716 - 7973665
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaatta 154  Q
    ||||||||||||||||| || ||||||| |||||||| ||||||| ||||||    
T  7973716 acacgacaccgacacttataattacacttaattatgtaatttttttaaatta 7973665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 8805525 - 8805638
Alignment:
Q  61 tatgaagcacaaacactcctcagattaggcatgtccgacagg----acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatt 156  Q
    ||||||||||  ||||||||| |||||||||||||| ||  |    |||| |||||||||| |  | ||||||| |||||||||||||| ||||||||||    
T  8805525 tatgaagcacggacactcctcggattaggcatgtcccacgtgtctgacactacaccgacacat--aattacactaaattatgtgattttctcaaattatt 8805622  T
Q  157 aactgtgtcgacgtgt 172  Q
    | | ||| ||||||||    
T  8805623 agcagtgccgacgtgt 8805638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 8931598 - 8931669
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtt 173  Q
    ||||||||| |||||| | || ||| |||||||||||| ||||| ||||||| ||| |||||||| ||||||    
T  8931598 gacacgacatcgacacatataattatactgaattatgttattttctcaaatttttagctgtgtcggcgtgtt 8931669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 205
Target Start/End: Complemental strand, 10294169 - 10294066
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtat 201  Q
    ||||||||||||||| | || ||||| |||| |||| |||| | ||||||||||| | || ||| | ||| ||| ||||||||||||||||||| ||| |    
T  10294169 acacgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgtccggtgttcgtgt 10294070  T
Q  202 ccgt 205  Q
    ||||    
T  10294069 ccgt 10294066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 32320665 - 32320728
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    ||||||||||||| || | || | ||| |||||||||||||||| ||||||||||||| |||||    
T  32320665 gacacgacaccgatacatataatgacattgaattatgtgattttatcaaattattaacggtgtc 32320728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 32511666 - 32511717
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||| |||||| || |||||||||||||||||||||| | |||||||||    
T  32511666 cgacaccaacacttataattacactgaattatgtgattttcttaaattatta 32511717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 2224273 - 2224223
Alignment:
Q  118 ttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgac 168  Q
    ||||| |||||||||||||| ||||||||| ||||||||| ||| ||||||    
T  2224273 ttgtaattacactgaattatatgatttttttaaattattagctgcgtcgac 2224223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 7027301 - 7027251
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgatt-ttttcaaattat 155  Q
    |||||||||||| | || |||||||||||||||||||| ||||||||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgatttttttcaaattat 7027251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 9195751 - 9195805
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||||| | || ||||||| |||||||| ||||| |||||||||||    
T  9195751 acacgacaccgacacatataattacactaaattatgtcattttctcaaattatta 9195805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 19369880 - 19369810
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||||||||||||||  ||||| |||||||||| ||||| ||||| | ||| | ||||| ||||||    
T  19369880 gacacgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttatccgtgtcaacgtgt 19369810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 1334720 - 1334623
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatc 202  Q
    ||||||||||| ||||  ||||| ||||||||||  |||||||||| | ||| | ||||| | ||||  || || |||||||||||||||||||||||    
T  1334720 cgacaccgacatttgtgattacattgaattatgtccttttttcaaaattttatccgtgtcaatgtgtctgtgtcagtgtcgtgtccggtgtccgtatc 1334623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 5462727 - 5462686
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    ||||| |||||||||||||||| ||||||||||||| |||||    
T  5462727 ttacaatgaattatgtgattttctcaaattattaacggtgtc 5462686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 157
Target Start/End: Original strand, 12627595 - 12627628
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||||||||||||||||||| |||||||    
T  12627595 ttacactgaattatgtgattttttcacattatta 12627628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 13360373 - 13360438
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||| || | || |||||||||||||||||||||| |||||||| ||   ||||||||||||    
T  13360373 gacaccgaaacatataattacactgaattatgtgattttctcaaattactagtggtgtcgacgtgt 13360438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 17327651 - 17327700
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaa 151  Q
    |||||||||| ||||| | |||||||||| |||||||||||||| |||||    
T  17327651 gacacgacactgacacatatagttacactaaattatgtgattttctcaaa 17327700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 147
Target Start/End: Original strand, 26402680 - 26402721
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgatttttt 147  Q
    ||||||||||||||||  |||||||||||||||| |||||||    
T  26402680 cgacaccgacacttgtgattacactgaattatgtcatttttt 26402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 157
Target Start/End: Original strand, 34225827 - 34225860
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||||| ||||||||||||||||||    
T  34225827 ttacactgaattatgcgattttttcaaattatta 34225860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 97
Target Start/End: Complemental strand, 3209517 - 3209481
Alignment:
Q  61 tatgaagcacaaacactcctcagattaggcatgtccg 97  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  3209517 tatgaagcacaaacactcctcggattaggcgtgtccg 3209481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 6349745 - 6349789
Alignment:
Q  114 acacttgtagttacactgaattatgtgattttttcaaattattaa 158  Q
    |||| |||| ||||| |||||||||| ||||||||||||||||||    
T  6349745 acacatgtaattacaatgaattatgtaattttttcaaattattaa 6349789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 7378038 - 7377978
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||| | || ||||| |||||||||||||||| ||||||| ||| | ||||||    
T  7378038 cgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtcg 7377978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 7569186 - 7569226
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgt 164  Q
    |||||||||||||||| ||||| ||||||||||| ||||||    
T  7569186 ttacactgaattatgtaattttctcaaattattatctgtgt 7569226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 7996378 - 7996438
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||| | | || |||||||||||||| ||||||| ||||||||||| | ||||||    
T  7996378 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcg 7996438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 8022423 - 8022363
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||| | | || |||||||||||||| ||||||| ||||||||||| | ||||||    
T  8022423 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcg 8022363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 9526038 - 9526077
Alignment:
Q  132 aattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||||| ||||||||||||| ||||||||||||    
T  9526038 aattatgtgatttt-tcaaattattaacagtgtcgacgtgt 9526077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 13632025 - 13632089
Alignment:
Q  133 attatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtc 196  Q
    ||||||||||||||||||||||||| | |||| |||  ||| || |||||||| |||||||||||    
T  13632025 attatgtgattttttcaaattattagcagtgttgacaagttggtctccgtgtcatgtccggtgtc 13632089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 206
Target Start/End: Original strand, 16488586 - 16488685
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgtat 201  Q
    |||||||||||||||| | || |||||||| ||| ||||||||| | |||  |||| |||||||| |||||     || |||||| |||||||||||| |    
T  16488586 gacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgt-----ccatgtcgtttccggtgtccgtgt 16488680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 21924935 - 21924995
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||| | || |||||||||||||| |||| || ||||||||||| | ||||||    
T  21924935 cgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgtcg 21924995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 23130405 - 23130437
Alignment:
Q  64 gaagcacaaacactcctcagattaggcatgtcc 96  Q
    |||||||| ||||||||||||||||||||||||    
T  23130405 gaagcacatacactcctcagattaggcatgtcc 23130437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 27904037 - 27904077
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgatttttt 147  Q
    |||||||||| ||||| ||||||||||||||||| ||||||    
T  27904037 gacaccgacatttgtaattacactgaattatgtgttttttt 27904077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 31429004 - 31429044
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgatttttt 147  Q
    |||||| ||| ||||| ||||||||||||||||||||||||    
T  31429004 gacacctacatttgtaattacactgaattatgtgatttttt 31429044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 104 - 209
Target Start/End: Original strand, 20539672 - 20539778
Alignment:
Q  104 cacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatc 202  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |||||||||||    
T  20539672 cacgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatc 20539771  T
Q  203 cgtgctt 209  Q
    |||||||    
T  20539772 cgtgctt 20539778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 19536397 - 19536502
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtga-ttttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatcc 203  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||  ||||||| ||||| | | ||||||||||||||||||||||||||     
T  19536397 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatct 19536496  T
Q  204 gtgctt 209  Q
    ||||||    
T  19536497 gtgctt 19536502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 15657926 - 15657829
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||  || |||| ||||||||| |||||||||||||||||| ||||    
T  15657926 acacgacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgtgtcgtgtccggtgaccgt 15657829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 21374706 - 21374804
Alignment:
Q  113 gacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtc--gtgtccggtgtccgtatccgtgctt 209  Q
    |||||||||| |||||||||||||||| ||||||||||||||||| |||||||| ||||||||| ||||||||  |||||| ||||||||||||||||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtccggtgtcc-gtgtccgtatccgtgctt 21374804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 38117159 - 38117257
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgtatccgt 205  Q
    ||||||| ||||||||| |||||| ||| ||||||||||||||||||||||| |||||||| ||||     || ||||||||||||||||||||||||||    
T  38117159 cgacaccaacacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtg-----tcagtgtcgtgtccggtgtccgtatccgt 38117253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 106 - 191
Target Start/End: Original strand, 30404850 - 30404936
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccg 191  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||| ||| |||||||| ||||||    
T  30404850 cgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtccg 30404936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 28412391 - 28412315
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||||||||||||||||| ||||||||||||| |||| ||||||||||| ||||||||||||| |||||||||    
T  28412391 ttacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtccgt 28412315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 15972932 - 15972841
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtc 196  Q
    ||||||||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||| ||||| ||| |||||||||| || ||||||    
T  15972932 cgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgtcgtatctggtgtc 15972841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 18422022 - 18421931
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtc 196  Q
    ||||||||||||||||| ||||||||||||||||||| |||| |||||||||| ||||||| ||||| ||| |||||||||| |||| ||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgtgtcgtatccgatgtc 18421931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 102 - 206
Target Start/End: Original strand, 23058438 - 23058544
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtga-ttttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||| ||||| | ||||| | | ||||||||||||| ||| |||||    
T  23058438 gacacgacaccgacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtcactgtccgtgtcgtgtcaggtatccgt 23058537  T
Q  200 atccgtg 206  Q
     ||||||    
T  23058538 gtccgtg 23058544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 21624326 - 21624221
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatg-tgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatcc 203  Q
    ||||||||||||||||| ||||||||||||||| |  |||||| ||||||||| |||||||| ||||| ||| || ||||||||| ||||||||||||||    
T  21624326 cgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtatcc 21624227  T
Q  204 gtgctt 209  Q
    | ||||    
T  21624226 gggctt 21624221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 30717526 - 30717590
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| || |||||    
T  30717526 gacacgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcg 30717590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 2438719 - 2438778
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||    
T  2438719 cgacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgtc 2438778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 103 - 205
Target Start/End: Original strand, 36756341 - 36756444
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtat 201  Q
    ||||||||||||||||| || |||||||||||||||| |||| ||||||||||||  ||||||||||||| ||| || ||||||| |||| ||| ||| |    
T  36756341 acacgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgtatccgatgttcgtgt 36756440  T
Q  202 ccgt 205  Q
    ||||    
T  36756441 ccgt 36756444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 37559036 - 37558957
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtc 184  Q
    ||||||||||||||||| ||||| ||||||||||||||||| |||||||||| |||||||| ||||| ||| ||||||||    
T  37559036 cgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtc 37558957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 30335476 - 30335392
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtc 189  Q
    ||||||||||| ||||| ||||||| |||||||| |||||||||||||||||  ||||||| |||| |||| |||||||||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtgtc 30335392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 974809 - 974746
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||  |||||||    
T  974809 acacgacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgtgtcg 974746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 12668419 - 12668474
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||||||||||| || |||||||||||||||| |||||||||||||||||    
T  12668419 gacacgacaccgacacttataattacactgaattatgtcattttttcaaattatta 12668474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 209
Target Start/End: Complemental strand, 33153487 - 33153380
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgtat 201  Q
    |||||||||| |||||||||| |||||||||||||||||||||||| |||| ||||  ||| ||| ||||| | |  | |||||| || |||||||||||    
T  33153487 gacacgacacggacacttgtaattacactgaattatgtgatttttttaaatcattagatgtttcggcgtgtcaatatcttgtcgtatctggtgtccgtat 33153388  T
Q  202 ccgtgctt 209  Q
     |||||||    
T  33153387 tcgtgctt 33153380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 6940310 - 6940205
Alignment:
Q  110 accgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgct 208  Q
    ||||||||||||| ||||||| |||||||| | ||||| ||||||||| |||||||| ||||| ||| |||||||||| |  | |||||||||||||| |    
T  6940310 accgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtatttgatgtccgtatccgtg-t 6940212  T
Q  209 ttcatag 215  Q
    |||||||    
T  6940211 ttcatag 6940205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 11223864 - 11223922
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| ||||| |||||||    
T  11223864 gacaccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgtc 11223922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 12940941 - 12941019
Alignment:
Q  112 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtc 189  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||||  |||||| |||||| ||| |||||||||||||    
T  12940941 cgacatttgtaattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtcgtgtc 12941019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 37419806 - 37419752
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatt 156  Q
    |||||||||||| |||||||| |||||||||||| ||||||||||||||||||||    
T  37419806 gacacgacaccggcacttgtaattacactgaattttgtgattttttcaaattatt 37419752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 209
Target Start/End: Original strand, 14996219 - 14996327
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtga-ttttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||| |||||||||||||||| ||||||| |||||| ||| |||||||||||||||| |||||||| | ||| ||| |||||||| ||| | | ||||||    
T  14996219 gacaagacaccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcggcttgtcagtgtccgtgtcatgt-ctgcgtccgt 14996317  T
Q  200 atccgtgctt 209  Q
    ||||||||||    
T  14996318 atccgtgctt 14996327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 191
Target Start/End: Original strand, 18841014 - 18841099
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccg 191  Q
    |||||||||||||||| ||||||| |||||||| |||||||||||||||||  ||||||  ||||| ||| ||| |||||||||||    
T  18841014 gacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtccatgtcgtgtccg 18841099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 4882692 - 4882762
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||| ||||||||||| |||||||||||||| | |||||||||||| |||| | || |||||||||    
T  4882692 gacacgacatcgacacttgtaattacactgaattatatcattttttcaaataattagcggtatcgacgtgt 4882762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 124 - 209
Target Start/End: Original strand, 21782836 - 21782922
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    |||||||||||||||||||||| ||||||||||| | |||||| ||||| ||| |  ||||||||||| ||||| |||| |||||||    
T  21782836 ttacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtgtctgtattcgtgctt 21782922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 24894452 - 24894382
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||| ||| |||||| || || ||||||||||||||||||||| ||||||||| |||||||| |||||    
T  24894452 gacacgaaaccaacacttttaattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgt 24894382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 209
Target Start/End: Complemental strand, 23718082 - 23717982
Alignment:
Q  109 caccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgc 207  Q
    ||||||||| | || |||||||||||||||||| ||| ||||||||||| | ||||||  |||| ||| |||||||| ||||| ||||| ||||||||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgc 23717984  T
Q  208 tt 209  Q
    ||    
T  23717983 tt 23717982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 209
Target Start/End: Complemental strand, 24105754 - 24105654
Alignment:
Q  109 caccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgc 207  Q
    ||||||||| | || |||||||||||||||||| ||| ||||||||||| | ||||||  |||| ||| |||||||| ||||| ||||| ||||||||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgc 24105656  T
Q  208 tt 209  Q
    ||    
T  24105655 tt 24105654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 29176495 - 29176552
Alignment:
Q  108 acaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    ||||| |||||| || ||||||||||||||||||  ||||||||||||||||||||||    
T  29176495 acaccaacacttataattacactgaattatgtgaccttttcaaattattaactgtgtc 29176552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 39323316 - 39323259
Alignment:
Q  113 gacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgt 170  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||| | ||||||||||    
T  39323316 gacacttgtaattacactgaattatgtaattttgtcaaattattagcggtgtcgacgt 39323259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 18420417 - 18420485
Alignment:
Q  90 catgtccgaca-ggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||| |||||| |||||||||||| || || || |||||||||||||||| |||||||||||    
T  18420417 catgtccgacatggacacaacaccgacacttataattgcattgaattatgtgattttctcaaattatta 18420485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 34337177 - 34337276
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    |||| |||||||||||||||| |||     |||||||||||||||||||||||| |||||||||| ||||| | | |||||||||| | |||| |||||     
T  34337177 gacaggacaccgacacttgtaatta-----aattatgtgattttttcaaattatcaactgtgtcggcgtgtcaatgtccgtgtcgtatacggtatccgtg 34337271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 5040793 - 5040735
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgatt--ttttcaaattattaactgt 162  Q
    ||||||||||||||||| ||||| ||||||||||||||  |||||||||||||| ||||    
T  5040793 cgacaccgacacttgtaattacattgaattatgtgattttttttcaaattattagctgt 5040735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 206
Target Start/End: Original strand, 16069272 - 16069354
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtg 206  Q
    |||||||||||||| ||||||||| ||||||||||| |||||| ||||| ||| |||||||| | | | |||||||||||||||    
T  16069272 ttacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgtcatat-ctgtgtccgtatccgtg 16069354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 18255980 - 18256039
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    |||||||||||||| || ||||| | |||||||||||||||| ||||||||| |||||||    
T  18255980 cgacaccgacacttctaattacattaaattatgtgatttttttaaattattatctgtgtc 18256039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 26769574 - 26769476
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgtat 201  Q
    |||| |||||||||||||||| ||||||   || ||||||| ||||||||||||||  ||||||| ||||     || |||||||||||||||||||| |    
T  26769574 gacatgacaccgacacttgtaattacaccagataatgtgatattttcaaattattagttgtgtcggcgtg-----tctgtgtcgtgtccggtgtccgtgt 26769480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 21616803 - 21616737
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtc 189  Q
    |||||||||||||||||||||| ||||||||||| | |||||| |||||  || |||||||||||||    
T  21616803 ttacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 28677950 - 28677908
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||||||||||||||||||||||||| | ||||||    
T  28677950 ttacactgaattatgtgattttttcaaattattagcggtgtcg 28677908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 44860382 - 44860328
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||||| | || ||||||||||||||| |||||| |||||||||||    
T  44860382 acacgacaccgacacatataattacactgaattatgcgattttctcaaattatta 44860328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 10535777 - 10535850
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtc 196  Q
    |||||||||||||||| ||||| ||||||||||| | |||||| ||| ||||| || ||||||||| |||||||    
T  10535777 ttacactgaattatgtcattttctcaaattattatcggtgtcggcgtattagtatctgtgtcgtgtacggtgtc 10535850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 20242727 - 20242830
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    |||||||||||| | || |||||||||||||||||||||| | |||  ||||  ||||||| ||||| ||| ||| |||||||| | ||| |||||||||    
T  20242727 cgacaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtccatgtcgtgt-ctgtgcccgtatccg 20242825  T
Q  205 tgctt 209  Q
    |||||    
T  20242826 tgctt 20242830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 20473381 - 20473321
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||| ||||||||||| |||||||||||||| ||| ||||| |||||||||  |||||||    
T  20473381 cgacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgtgtcg 20473321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 34784978 - 34785082
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    |||||||||||||||| | || ||||||| |||||||||||||| | |||  ||||  |||||||  |||| ||| ||||||||||||| || ||||||     
T  34784978 gacacgacaccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgtgtctggggtccgtg 34785077  T
Q  201 tccgt 205  Q
    |||||    
T  34785078 tccgt 34785082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 43586005 - 43586097
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtcc 197  Q
    ||||||||||||||||  ||||| |||||||||| ||||| ||||| | ||| |||||| ||||||| ||| || ||  ||||||||||||||    
T  43586005 cgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttatctgtgttgacgtgtcagtgtcagtaccgtgtccggtgtcc 43586097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 5367251 - 5367200
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||||| | || |||||||||||||||||||||  |||||||||||    
T  5367251 cgacaccgacacatataattacactgaattatgtgatttcctcaaattatta 5367200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 11670789 - 11670714
Alignment:
Q  131 gaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgt 205  Q
    |||||||||||||||||||||||||||   | |||||||||| ||| ||  |||||| | ||||||||||||||||    
T  11670789 gaattatgtgattttttcaaattattagtggcgtcgacgtgtcagtgtctatgtcgtattcggtgtccgtatccgt 11670714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 18622669 - 18622614
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||| |||| | || |||||||||||||||||||||| | |||||||||    
T  18622669 gacacgacaccaacacgtataattacactgaattatgtgattttattaaattatta 18622614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 34691805 - 34691856
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||||| | || |||||||||||||| ||||||| |||||||||||    
T  34691805 cgacaccgacacatataattacactgaattatatgattttatcaaattatta 34691856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 34714217 - 34714268
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||||| | || |||||||||||||| ||||||| |||||||||||    
T  34714217 cgacaccgacacatataattacactgaattatatgattttatcaaattatta 34714268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 42832277 - 42832336
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||||||| || |||||||||| ||||| ||||| ||||||||||| | ||||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgtcg 42832336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 30527591 - 30527653
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgt 164  Q
    ||||||| |||||||| | || ||||||| |||||| ||||||| ||||||||||||| ||||    
T  30527591 gacacgataccgacacatataattacactaaattatatgattttctcaaattattaacagtgt 30527653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 31284089 - 31284007
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgt 205  Q
    ||||| || ||||||||||||| ||||||||||| | |||||| ||||| ||| | |||||  |||||||||||||| |||||    
T  31284089 ttacaatggattatgtgattttctcaaattattagcagtgtcggcgtgtaagtgtacgtgttatgtccggtgtccgtgtccgt 31284007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 36409645 - 36409711
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtc 189  Q
    ||||||| |||||||||||||||||||||||| | | |||||| | ||| ||| |||||||||||||    
T  36409645 ttacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtc 36409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 2331834 - 2331801
Alignment:
Q  125 tacactgaattatgtgattttttcaaattattaa 158  Q
    ||||||||||||||||||||| ||||||||||||    
T  2331834 tacactgaattatgtgattttctcaaattattaa 2331801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 157
Target Start/End: Complemental strand, 5473369 - 5473336
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattatta 157  Q
    |||||| |||||||||||||||||||||||||||    
T  5473369 ttacaccgaattatgtgattttttcaaattatta 5473336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 186
Target Start/End: Original strand, 10547947 - 10548011
Alignment:
Q  125 tacactgaattatgtgattttt--tcaaattattaactgtgtcgacgtgttagt-tccgtgtcgt 186  Q
    ||||||||||||| ||||||||  | ||||||||||| |||||||||||| ||| ||||||||||    
T  10547947 tacactgaattatatgatttttatttaaattattaacggtgtcgacgtgtcagtgtccgtgtcgt 10548011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 199
Target Start/End: Complemental strand, 18276579 - 18276486
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||||||   || ||||||||||||| |||||||| ||||||||||| | |||||| | | | ||| || || |||||||||||||||||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgt 18276486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 166
Target Start/End: Original strand, 24975320 - 24975385
Alignment:
Q  101 ggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||||||||| | | || ||||||||||||||  |||||| ||||||||||| | ||||||    
T  24975320 ggacacgacaccgacgcatatatttacactgaattatacgattttctcaaattattagcggtgtcg 24975385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 206
Target Start/End: Complemental strand, 28596528 - 28596431
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgat-tttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatcc 203  Q
    |||||||||||||| || ||||||||| ||||||||| |||||||    |||| |||||||| ||||| | | |||||||||||||| |||| |||||||    
T  28596528 cgacaccgacacttataattacactgacttatgtgatgtttttca----attagctgtgtcggcgtgtcattgtccgtgtcgtgtcc-gtgtacgtatcc 28596434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 44605141 - 44605190
Alignment:
Q  108 acaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||| |||| ||||| |||||||||| ||||| |||||||||||    
T  44605141 acaccgacacatgtaattacattgaattatgttattttctcaaattatta 44605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 143
Target Start/End: Complemental strand, 44635557 - 44635520
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgatt 143  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  44635557 cgacaccgacacttgtaattacactgaattacgtgatt 44635520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 1886896 - 1886936
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgt 164  Q
    ||||| |||||||||| | ||||||||||||||||||||||    
T  1886896 ttacattgaattatgtaaatttttcaaattattaactgtgt 1886936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 4332967 - 4332891
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||| ||||||||||||||||  |||||||||| | |||||| | ||| ||| || ||| ||||||||||||||||    
T  4332967 ttacattgaattatgtgattttcccaaattattatcagtgtcggcatgtaagtatctgtgccgtgtccggtgtccgt 4332891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 22084850 - 22084890
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgt 164  Q
    |||||||||||||| ||||||| ||||||||||||| ||||    
T  22084850 ttacactgaattatatgattttctcaaattattaacggtgt 22084890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 23921294 - 23921250
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgac 168  Q
    |||||||||||||||| ||||| ||||||||||||| || |||||    
T  23921294 ttacactgaattatgtaattttctcaaattattaacggtatcgac 23921250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 30298465 - 30298513
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||||||| ||||| | ||||||||| | ||||||||||||    
T  30298465 ttacactgaattatgtcattttattaaattattatcggtgtcgacgtgt 30298513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 197
Target Start/End: Complemental strand, 31018649 - 31018557
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtcc 197  Q
    |||||||||||| | || ||||||| ||| |||||||||| | ||||||||| | |||| | ||||| ||| ||| |||||| ||||||||||    
T  31018649 cgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagtgtccatgtcgtatccggtgtcc 31018557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 32749821 - 32749869
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaa 150  Q
    |||||||||| ||||||| |  |||||||||||||||||||||| ||||    
T  32749821 gacacgacactgacacttattattacactgaattatgtgattttctcaa 32749869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 33519773 - 33519741
Alignment:
Q  177 tccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    |||| ||||||||||||||||||||||||||||    
T  33519773 tccgcgtcgtgtccggtgtccgtatccgtgctt 33519741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 35449554 - 35449514
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgt 164  Q
    |||||||||||| ||||||||| ||||||||||||| ||||    
T  35449554 ttacactgaattctgtgattttctcaaattattaacagtgt 35449514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 37411264 - 37411304
Alignment:
Q  126 acactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||||||||||| ||||||||||| | ||||||    
T  37411264 acactgaattatgtgattttctcaaattattagcggtgtcg 37411304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 39279732 - 39279676
Alignment:
Q  108 acaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgt 164  Q
    |||||||||| | || |||||||||||||| ||||||| ||| ||||||||| ||||    
T  39279732 acaccgacacatataattacactgaattatttgattttctcatattattaacggtgt 39279676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 3e-33; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 24339705 - 24339601
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||| | | ||| ||||||||||||||||||||    
T  24339705 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtccggtgtccgta 24339606  T
Q  201 tccgt 205  Q
    |||||    
T  24339605 tccgt 24339601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 102 - 209
Target Start/End: Complemental strand, 27945104 - 27944996
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    ||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||   |||||| ||||| ||| ||||||||||||||||||||||||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgta 27945005  T
Q  201 tccgtgctt 209  Q
    |||||||||    
T  27945004 tccgtgctt 27944996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 102 - 209
Target Start/End: Original strand, 43027465 - 43027573
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||| |||| ||||| ||| |||||||||||||| ||||||| |    
T  43027465 gacacgacaccgacacttgtatttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtccgca 43027564  T
Q  201 tccgtgctt 209  Q
    |||||||||    
T  43027565 tccgtgctt 43027573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 209
Target Start/End: Original strand, 7328640 - 7328795
Alignment:
Q  61 tatgaagcacaaacactcctcagattaggcatgtccgacag------gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaatta 154  Q
    |||||||||| ||||||| || |||||||| |||||||||       |||||||||||||||| | || ||||||| |||||||| ||||| ||||||||    
T  7328640 tatgaagcacgaacactcatcggattaggcgtgtccgacaccaacacgacacgacaccgacacatataattacactaaattatgttattttctcaaatta 7328739  T
Q  155 ttaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    ||| | || ||||||||||| | || ||||||||| ||||||||||||||||||||    
T  7328740 ttagcagtatcgacgtgttaatgtctgtgtcgtgttcggtgtccgtatccgtgctt 7328795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 13770754 - 13770657
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccg 198  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||||| ||||||||| |||||||| ||| | ||| ||||||||||||||| ||||||    
T  13770754 gacacgacaacgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgtccgatgtccg 13770657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 7438769 - 7438705
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  7438769 gacatgacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcg 7438705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 18215181 - 18215265
Alignment:
Q  101 ggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtc 184  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||    
T  18215181 ggacacgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcgtcggcgtgttagtgtccgtgtc 18215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 24105737 - 24105634
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    |||| |||||||||||| ||||||||||| |||  ||||||||||||||||| |||||||| ||||| ||| |||||||||||||| || ||||||||||    
T  24105737 cgactccgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc-gtatccgtatccg 24105639  T
Q  205 tgctt 209  Q
    |||||    
T  24105638 tgctt 24105634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 106 - 205
Target Start/End: Complemental strand, 26733363 - 26733263
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    |||||||||||| | || ||| |||||||||||||||||| ||||||||||| | |||||||||||| ||| ||||||||||||| |||||| |||||||    
T  26733363 cgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtctggtgtcggtatccg 26733264  T
Q  205 t 205  Q
    |    
T  26733263 t 26733263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 2334323 - 2334241
Alignment:
Q  92 tgtccgacaggacacgacaccgacacttgtagttacactgaattatgtgatt--ttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||||||||||||  ||||||||||||||||| ||||| |||||    
T  2334323 tgtccgacacgacacgacaccgacacttgtaattacactaaattatgtgattttttttcaaattattaactttgtcgccgtgt 2334241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 5409832 - 5409927
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtc 196  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||  ||||| ||| ||| |||||| |||||||||    
T  5409832 gacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtccatgtcgtatccggtgtc 5409927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 11061077 - 11061176
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgt 205  Q
    |||||||||||||||| ||| ||| |||||||||||||||||||||||||| ||||||||  |||| ||| |||||||||| |||| ||||||| |||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccgatgtccgtgtccgt 11061176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 25481961 - 25481895
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||    
T  25481961 cgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 25481895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 9408333 - 9408394
Alignment:
Q  105 acgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||    
T  9408333 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcg 9408394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 9778563 - 9778467
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgtat 201  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||| | |||||||   |||     ||||||||||||||||||||||| |    
T  9778563 gacacgacaccgacacttgtaattatactgaattatgtgattttttcaaattatcagctgtgtc--agtg-----tccgtgtcgtgtccggtgtccgtgt 9778471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 102 - 208
Target Start/End: Original strand, 32094016 - 32094124
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtga-ttttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||  ||||| | | ||||||| |  ||||||||||  ||||||||    
T  32094016 gacacgacaccgacatttgtaattacactgaattatgtgatttttttcaaattattagttgtgttggcatgttagtgtttgtgtcgtgtcttgtgtccgt 32094115  T
Q  200 atccgtgct 208  Q
    |||||||||    
T  32094116 atccgtgct 32094124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 26033457 - 26033512
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26033457 gacacgagaccgacacttgtaattacactgaattatgtgattttttcaaattatta 26033512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 3991384 - 3991323
Alignment:
Q  105 acgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||  |||||||    
T  3991384 acgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgtcg 3991323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 18039062 - 18039006
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgatt-ttttcaaattatta 157  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  18039062 gacacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 18039006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 107 - 218
Target Start/End: Complemental strand, 33994270 - 33994159
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgt 205  Q
    |||||||||||||||| || |||||||||||||||  ||||||||||| ||  || |||| ||||| ||| | |||||||||||  ||||||||||||||    
T  33994270 gacaccgacacttgtaattgcactgaattatgtgaccttttcaaattagtagttgcgtcggcgtgtcagtgttcgtgtcgtgtcaagtgtccgtatccgt 33994171  T
Q  206 gctttcataggta 218  Q
    || ||||||||||    
T  33994170 gc-ttcataggta 33994159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 1433517 - 1433419
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||||||||||| | || ||||||  ||| |||||||||| ||||||||||||| |||||| ||||| | | |||||||||||| ||||||||||    
T  1433517 gacacgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgt 1433419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 1885635 - 1885538
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||||||||||||||  ||||| |||||||||| ||||||||||| | ||| | ||||||| ||||  || || ||||||||||||||||||||    
T  1885635 acacgacaccgacacttgtgattacattgaattatgtcattttttcaaaattttatccgtgtcgatgtgtccgtatcagtgtcgtgtccggtgtccgt 1885538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 11272582 - 11272637
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaat--tatgtgattttttcaaattat 155  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||||||||||    
T  11272582 gacacgacaccgacacttgtaattacactgaattatatgtgattttttcaaattat 11272637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 165
Target Start/End: Complemental strand, 19992061 - 19992001
Alignment:
Q  105 acgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    ||||||||||||||| || |||||||||| ||||||||||| ||||||||||| |||||||    
T  19992061 acgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 22602706 - 22602810
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttcc-gtgtcgtgtccggtgtccgta 200  Q
    |||||||||||||||| | || |||||||||||||||||||||| |||||| ||| || |||||| ||||| ||| || |||||||||  |||| ||||     
T  22602706 gacacgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtgcctgtgtcgtgttaggtgcccgtg 22602805  T
Q  201 tccgt 205  Q
    |||||    
T  22602806 tccgt 22602810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 112 - 199
Target Start/End: Complemental strand, 43250046 - 43249958
Alignment:
Q  112 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||| || |||||||| ||||||| ||||| ||||||||||| | |||||| ||||| ||| |||||||| ||||||||||||||    
T  43250046 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtccgt 43249958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 7058489 - 7058434
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||| ||||||||| |||||||||||||  |||||||||||||||||||    
T  7058489 gacacgacaccaacacttgtaattacactgaattacatgattttttcaaattatta 7058434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 19213862 - 19213811
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||||||||    
T  19213862 cgacaccgacacttgtatttacactgcattatgtgattttttaaaattatta 19213811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 21880211 - 21880160
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||||||||    
T  21880211 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattatta 21880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 28155629 - 28155562
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtt 173  Q
    ||||||||||||||||| |||||| ||||||||| ||||| ||||||||||| | |||||| ||||||    
T  28155629 cgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtcggcgtgtt 28155562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 176
Target Start/End: Complemental strand, 35862024 - 35861953
Alignment:
Q  105 acgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt 176  Q
    ||||||| |||||||  | ||||| ||||||||||||||||||||||||||||  ||||||| |||||||||    
T  35862024 acgacacagacacttacaattacattgaattatgtgattttttcaaattattagttgtgtcggcgtgttagt 35861953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 2425736 - 2425830
Alignment:
Q  109 caccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatc 202  Q
    ||||||||| | ||||| |||| |||||||||||||| ||||||||||||| ||| || ||||| ||| || ||||||||||| ||||| |||||    
T  2425736 caccgacacatatagttccacttaattatgtgattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtccagtgtctgtatc 2425830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 7197297 - 7197363
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||||||||||| ||||| |||||||  ||||||||| ||||||||| |||||||| |||||    
T  7197297 cgacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgt 7197363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 105 - 147
Target Start/End: Complemental strand, 21560563 - 21560521
Alignment:
Q  105 acgacaccgacacttgtagttacactgaattatgtgatttttt 147  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  21560563 acgacaccgacacttgtaattacactgaattatgtgatttttt 21560521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 26329378 - 26329476
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||| ||||||| | || |||||||||||| |||| |||| |||||||||||||  ||||| ||||| ||| || ||||||||||| ||||||||    
T  26329378 gacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtccagtgtccgt 26329476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 61 - 206
Target Start/End: Complemental strand, 49107923 - 49107780
Alignment:
Q  61 tatgaagcacaaacactcctcagattaggcatgtccgacaggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaact 160  Q
    ||||||||||| ||||||||| ||||||| |||||| ||   ||||||||||||||| | || | ||||| ||||||||| |||| ||||||||||| |     
T  49107923 tatgaagcacagacactcctcggattaggtatgtcccac-taacacgacaccgacacatataatcacactcaattatgtg-ttttctcaaattattagcg 49107826  T
Q  161 gtgtcgacgtgttag-ttccgtgtcgtgtccggtgtccgtatccgtg 206  Q
    ||||||  |||| ||  ||||||||||||||  ||||||||||||||    
T  49107825 gtgtcggtgtgtcagagtccgtgtcgtgtcc-ttgtccgtatccgtg 49107780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 11890915 - 11890972
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaac 159  Q
    ||||||||||| |||||  || |||||||||||||| |||||||||||||||||||||    
T  11890915 gacacgacacctacactcataattacactgaattatatgattttttcaaattattaac 11890972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 199
Target Start/End: Complemental strand, 19206108 - 19206015
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||| | || ||| | |||||||||||||||| ||||||||||| | |||||| |||||| || ||||||||||||| ||| |||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtctggtatccgt 19206015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 6028688 - 6028584
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    ||||||||||||||| ||||| ||||| | |||||||| || ||||||||||||||||  | |||| |||| ||| || |||||||||| | |||||||     
T  6028688 gacacgacaccgacatttgtaattacattaaattatgttatattttcaaattattaaccatatcgatgtgtcagtgtctgtgtcgtgtctgatgtccgtg 6028589  T
Q  201 tccgt 205  Q
    |||||    
T  6028588 tccgt 6028584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 8234205 - 8234145
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||| ||||||||  ||||||||||||||| |||||||||||||||||  |||||||    
T  8234205 cgacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgtgtcg 8234145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 11665436 - 11665491
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||| |||| |||||||| || ||| ||||||||||||||||||||||||||||||    
T  11665436 gacatgacatcgacacttataattagactgaattatgtgattttttcaaattatta 11665491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 199
Target Start/End: Original strand, 11722121 - 11722192
Alignment:
Q  129 ctgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||||||||| ||||||| ||| | |||||| ||||| ||| ||||||||||||||||| |||||    
T  11722121 ctgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgt 11722192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 13300473 - 13300418
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||| |||||||| ||| ||| |||||||||||||| |||||||||||||||||||    
T  13300473 gacatgacaccgagactggtaattacactgaattatatgattttttcaaattatta 13300418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 21864867 - 21864761
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtga--ttttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatc 202  Q
    ||||| ||||||||||| ||||||| |||||| |||  |||||||||||||||| |||||||   ||||  || ||||||||||||||| |||  |||||    
T  21864867 cgacagcgacacttgtaattacactaaattatatgattttttttcaaattattagctgtgtccgtgtgtccgtgtccgtgtcgtgtccgatgtgtgtatc 21864768  T
Q  203 cgtgctt 209  Q
    |||||||    
T  21864767 cgtgctt 21864761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 25822715 - 25822648
Alignment:
Q  105 acgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||||||||| |||||||||||| ||   ||||||||||||||||  ||||||| |||||    
T  25822715 acgacaccgacacttgtaattacactgaattgtgattttttttcaaattattagttgtgtcggcgtgt 25822648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 15680868 - 15680802
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||||| || ||||||| ||||||||||||||||  |||||||| || ||||| |||||    
T  15680868 cgacaccgacacttataattacactaaattatgtgattttttttaattattagctatgtcggcgtgt 15680802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 29787387 - 29787437
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtta 174  Q
    |||||||||||||||||||||| ||||||||||| | |||||| |||||||    
T  29787387 ttacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtta 29787437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 32308183 - 32308113
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||| ||||| |  | |||||||||||||||||||||| ||||||||||| | |||||| |||||    
T  32308183 gacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgt 32308113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 197
Target Start/End: Original strand, 36297336 - 36297436
Alignment:
Q  97 gacaggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgt 195  Q
    ||||| |||||| |||||||| | | ||| || |||||||||||||||| | ||||||||| | ||||||| |||| | | |||||||||||||||||||    
T  36297336 gacagaacacgaaaccgacacatatcgttccaatgaattatgtgattttcttaaattattagccgtgtcga-gtgtcaatgtccgtgtcgtgtccggtgt 36297434  T
Q  196 cc 197  Q
    ||    
T  36297435 cc 36297436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 3142021 - 3142057
Alignment:
Q  60 gtatgaagcacaaacactcctcagattaggcatgtcc 96  Q
    |||||||||||||||||| ||||||||||||||||||    
T  3142021 gtatgaagcacaaacactactcagattaggcatgtcc 3142057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 11831481 - 11831425
Alignment:
Q  116 acttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||| ||||||| |||||| |||||||||||||||||||  |||||||| ||||    
T  11831481 acttgtaattacactaaattatatgattttttcaaattattagttgtgtcgatgtgt 11831425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 17851472 - 17851396
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||||||||||||||||| | ||||||||| | || |||| ||||  || ||| |||||||||||||||||||    
T  17851472 ttacactgaattatgtgattttctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtccggtgtccgt 17851396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 20549850 - 20549790
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||| | || ||||||||||||| |||||||| ||||||||||| | ||||||    
T  20549850 cgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcg 20549790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 21140978 - 21141082
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttag-ttccgtgtcgtgtccggtgtccgta 200  Q
    |||||||| ||||||| | || | |||||||||||| ||||||| | |||||||||   ||||||||||||  |  |||||||||||| ||||||||||     
T  21140978 gacacgactccgacacctataatcacactgaattatatgattttcttaaattattagtggtgtcgacgtgtcggcgtccgtgtcgtgtacggtgtccgtg 21141077  T
Q  201 tccgt 205  Q
    |||||    
T  21141078 tccgt 21141082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 151
Target Start/End: Complemental strand, 48438604 - 48438560
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaa 151  Q
    ||||||||||| |||| ||||| ||||||||||||||||||||||    
T  48438604 gacaccgacacgtgtaattacattgaattatgtgattttttcaaa 48438560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 15902885 - 15902830
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||| |||||||||| | || ||||||| |||||||||||||| |||||||||||    
T  15902885 gacacaacaccgacacatataattacactaaattatgtgattttatcaaattatta 15902830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 16341559 - 16341504
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||||| ||| | || ||||||| |||||||||||||| |||||||||||    
T  16341559 gacacgacaccggcacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 18013070 - 18013125
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||| ||||| | || |||||||||||||||| ||||||| |||||||||    
T  18013070 gacacgacactgacacatataattacactgaattatgtaatttttttaaattatta 18013125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 1401083 - 1401033
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||| |||| || |||||||||||||||||| ||| |||||||||||    
T  1401083 gacaccgatacttataattacactgaattatgtgagtttctcaaattatta 1401033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 13557750 - 13557838
Alignment:
Q  115 cacttgtagttacactgaattatgtga---ttttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||| ||||||||||||||||||   |||||| |||||||||  | ||||| ||||| ||| || ||||| ||||||||||||||    
T  13557750 cacttgtaattacactgaattatgtgattttttttttaaattattagttttgtcggcgtgtcagtgtctgtgtcatgtccggtgtccgt 13557838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 32287463 - 32287525
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgac 168  Q
    |||||||||||| | || || ||||||||||||||||||| ||| ||||||| | ||||||||    
T  32287463 cgacaccgacacatatacttgcactgaattatgtgattttctcagattattagcggtgtcgac 32287525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 40287361 - 40287406
Alignment:
Q  110 accgacacttgtagttacactgaattatgtgattttttcaaattatt 156  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  40287361 accgacacttgtaattacactgaa-tatatgattttttcaaattatt 40287406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 199
Target Start/End: Complemental strand, 598266 - 598173
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||||||||  | ||||| | ||||| |||||||| | ||||||||| | ||||||| |||| ||| |||||||| |||| |||||||||    
T  598266 gacaccgacacttacaattacatttaattacgtgattttcttaaattattagcggtgtcgatgtgtcagtgtccgtgtcatgtctggtgtccgt 598173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 2034481 - 2034397
Alignment:
Q  125 tacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    |||||| |||||| |||| || |||||||||||   |||||||||||| ||| |||||||||||| | || |||||||||||||||    
T  2034481 tacactaaattatatgatattctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgt-cagtatccgtatccgtgctt 2034397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 157
Target Start/End: Complemental strand, 2424655 - 2424622
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||||||||||||||| |||||||||||    
T  2424655 ttacactgaattatgtgattttctcaaattatta 2424622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 5548739 - 5548686
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattat 155  Q
    |||||||||| ||||| | || |||||||||||||| ||||||| |||||||||    
T  5548739 gacacgacactgacacatataattacactgaattatttgattttctcaaattat 5548686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 8056963 - 8057003
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    |||||||||||||||| ||||||| |||||||||||||||||    
T  8056963 ttacactgaattatgtaatttttt-aaattattaactgtgtc 8057003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 9482993 - 9482944
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattat 155  Q
    |||||||||||| | || |||||||||||| ||||||||| |||||||||    
T  9482993 cgacaccgacacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 11700844 - 11700803
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    ||||| |||||||||||||||| ||||||||||||| |||||    
T  11700844 ttacattgaattatgtgattttgtcaaattattaacggtgtc 11700803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 42720891 - 42720956
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||| ||||| | || ||||| | |||||||||||||||||||||||||| | ||||| ||||||    
T  42720891 gacactgacacatataattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgt 42720956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 5236049 - 5235949
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    ||||||||||||| |  | || ||||||| |||||| | ||||| | ||||||||| | |||||||||||| ||| || |||||||||||  ||||||||    
T  5236049 gacacgacaccgatatatataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtccaatgtccgta 5235950  T
Q  201 t 201  Q
    |    
T  5235949 t 5235949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 186
Target Start/End: Complemental strand, 10042999 - 10042915
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgt 186  Q
    ||||||||| ||||||| || |||| || |||||||||| ||| |||||||||||   |||||| ||||| ||| ||||||||||    
T  10042999 acacgacactgacacttataattacgctaaattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgtgtcgt 10042915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 17307956 - 17307904
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaatta 154  Q
    ||||||||||| |||| | || |||||||||||||||| ||||| ||||||||    
T  17307956 gacacgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 21568557 - 21568597
Alignment:
Q  56 caatgtatgaagcacaaacactcctcagattaggcatgtcc 96  Q
    |||| ||||||||||| ||||||||||||||| ||||||||    
T  21568557 caatctatgaagcacagacactcctcagattaagcatgtcc 21568597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 197
Target Start/End: Complemental strand, 21826332 - 21826240
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtcc 197  Q
    |||||||||||| | |  ||| ||||| |||||||||||||| |||||||||   |||||| ||||||||| ||  ||||||||| |||||||    
T  21826332 cgacaccgacacatattattagactgagttatgtgatttttttaaattattagtcgtgtcggcgtgttagtgtctatgtcgtgtctggtgtcc 21826240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 30731078 - 30731046
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattatt 156  Q
    |||||||||||||||||||||| ||||||||||    
T  30731078 ttacactgaattatgtgattttctcaaattatt 30731046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 41020537 - 41020489
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||| |||||||||||||||  |||||||||  |||||||||||||    
T  41020537 ttacactaaattatgtgatttttgtaaattattagttgtgtcgacgtgt 41020489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 8e-31; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 28918062 - 28917966
Alignment:
Q  104 cacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttag-ttccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||| ||||| || ||||||||||||||||||||||||    
T  28918062 cacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtccgt 28917966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 103 - 199
Target Start/End: Original strand, 15796291 - 15796388
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| ||||| | | |||||||||||||||||||||||    
T  15796291 acacgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15796388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 3164011 - 3164119
Alignment:
Q  92 tgtccgacaggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtcc 190  Q
    |||| |||| ||||||||| | ||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||  | | ||||||||||||||    
T  3164011 tgtcggacacgacacgacatcaacacttgttcttacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtcc 3164110  T
Q  191 ggtgtccgt 199  Q
    |||||||||    
T  3164111 ggtgtccgt 3164119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 8587021 - 8587125
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  ||||||| ||||| ||| |||||||| ||||||||||||||||| |    
T  8587021 cgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgtatctg 8587120  T
Q  205 tgctt 209  Q
    |||||    
T  8587121 tgctt 8587125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 55401134 - 55401030
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||||||| ||| | ||| |||||||||| ||||||||||||||| |    
T  55401134 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgtatctg 55401035  T
Q  205 tgctt 209  Q
    |||||    
T  55401034 tgctt 55401030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 10955011 - 10954912
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgtatccgt 205  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||  ||||||| ||||| |||   || |||||||||||||||||||||||    
T  10955011 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagt---gt-tcgtgtccggtgtccgtatccgt 10954916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 106 - 205
Target Start/End: Original strand, 16000016 - 16000116
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||  ||||||| ||||| ||| || ||||||||| |||||||||| ||||    
T  16000016 cgacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtgtccg 16000115  T
Q  205 t 205  Q
    |    
T  16000116 t 16000116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 106 - 199
Target Start/End: Original strand, 10335286 - 10335380
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||||||||| ||||||| || ||||||| |||||||||||||||  ||||||| ||||| ||| |||||||||||||||||||||||    
T  10335286 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 10335380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 8383316 - 8383213
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    |||||||||||||| || |||||||||||||| ||||||| ||||||||||| | |||||| ||||| | | |||||||||||||| |||||||| ||||    
T  8383316 cgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgtccg 8383217  T
Q  205 tgct 208  Q
    ||||    
T  8383216 tgct 8383213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 14216954 - 14216848
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtat 201  Q
    ||||||||| |||||||||| |||||||||||||| |||| |||| |||||||||  ||||||||||||| ||| |||||||||||| | ||||||| ||    
T  14216954 acacgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgt-ctgtgtccgcat 14216856  T
Q  202 ccgtgctt 209  Q
    ||||||||    
T  14216855 ccgtgctt 14216848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 14223083 - 14222977
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtat 201  Q
    ||||||||| |||||||||| |||||||||||||| |||| |||| |||||||||  ||||||||||||| ||| |||||||||||| | ||||||| ||    
T  14223083 acacgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgt-ctgtgtccgcat 14222985  T
Q  202 ccgtgctt 209  Q
    ||||||||    
T  14222984 ccgtgctt 14222977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 106 - 205
Target Start/End: Complemental strand, 21479177 - 21479083
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgtatccgt 205  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||||||||||| |||||||| ||||     || |||||||||||||||||||| |||||    
T  21479177 cgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtg-----tcagtgtcgtgtccggtgtccgtgtccgt 21479083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 51206353 - 51206412
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  51206353 cgacaccgacacttgtatttacactgaattatgtgattttttcaaattattagctgtgtc 51206412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 4987287 - 4987357
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||    
T  4987287 gacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 4987357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 41961646 - 41961744
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||||||||||||| |||||| |||| ||||||| ||||||||||||||  |||| || ||||| ||| || ||||||||||||||||||||    
T  41961646 gacacgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtcagtgtctgtgtcgtgtccggtgtccgt 41961744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 750614 - 750719
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt-tagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||||||||||||| || ||  |||||||||||| ||||||||||||||  ||||||| |||||  ||| |||||||||||||||||||||||    
T  750614 gacacgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcgccgtgtcaagtgtccgtgtcgtgtccggtgtccgt 750713  T
Q  200 atccgt 205  Q
     |||||    
T  750714 gtccgt 750719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 10268487 - 10268552
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  10268487 gacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgt 10268552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 34185108 - 34185189
Alignment:
Q  92 tgtccgaca-ggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| | |||||| |||||    
T  34185108 tgtccgacatggacacgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgt 34185189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 105 - 165
Target Start/End: Complemental strand, 1509599 - 1509539
Alignment:
Q  105 acgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||    
T  1509599 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 1509539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 14747625 - 14747526
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgatt-ttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgta 200  Q
    |||||||||| ||| |||||| ||||||| |||||||||||| |||||||||||||| |||||||| ||||     || |||||||||||||||||||||    
T  14747625 gacacgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtg-----tcagtgtcgtgtccggtgtccgta 14747531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 14829752 - 14829657
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtcc 197  Q
    ||||||||||||||||||||| ||||  ||||||||||||| |||||||||||||| |||||||| ||||| ||| || ||||| ||||||||||||    
T  14829752 gacacgacaccgacacttgtaattaccatgaattatgtgat-ttttcaaattattagctgtgtcggcgtgtcagtgtctgtgtcatgtccggtgtcc 14829657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 26508166 - 26508110
Alignment:
Q  109 caccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 26508110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 49651782 - 49651846
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| | ||||||    
T  49651782 gacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtcg 49651846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 103 - 205
Target Start/End: Original strand, 4990964 - 4991067
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtat 201  Q
    ||||||| |||||||||||| |||||||||||||||| ||||| ||||| ||||| | ||||||  |||| ||| |||||||||||| |||||||||| |    
T  4990964 acacgacgccgacacttgtaattacactgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgtgt 4991063  T
Q  202 ccgt 205  Q
    ||||    
T  4991064 ccgt 4991067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 25093561 - 25093470
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtc 196  Q
    |||||||||||| | || |||||||||||| ||||||||| |||||| |||||| |||||| ||||||||| || |||||||||||||||||    
T  25093561 cgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgtcgtgtccggtgtc 25093470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 34910377 - 34910310
Alignment:
Q  105 acgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||  ||||||| |||||    
T  34910377 acgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgt 34910310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 14209176 - 14209106
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||| |||||||||| |||||||||||||||||||||||| |||||||||  ||||||| |||||    
T  14209176 gacacgacactgacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgtgt 14209106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 191
Target Start/End: Original strand, 26492205 - 26492291
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccg 191  Q
    ||||||||| ||||||| |||||||||||| | ||||||||||||||||||| || ||||| ||||| ||| |||||||||||||||    
T  26492205 cgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccg 26492291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 21256984 - 21257045
Alignment:
Q  104 cacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    ||||| ||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  21256984 cacgataccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtc 21257045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 28812577 - 28812508
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||| |||||    
T  28812577 acacgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgt 28812508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 199
Target Start/End: Original strand, 24205047 - 24205135
Alignment:
Q  112 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||| || |||||||| ||||||| ||||| ||||||||||| | |||||| ||||| ||| |||||||||||||||||||||||    
T  24205047 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 24205135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 27505309 - 27505245
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||  ||||||||| ||||||||    
T  27505309 gacacgacaccgacacttgtaattacacttaattatgtgatttttaaaaattattagctgtgtcg 27505245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 25775568 - 25775509
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgatt-ttttcaaattattaactgtgt 164  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||    
T  25775568 cgacaccgacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgt 25775509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 25948883 - 25948938
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||| |||||| || ||||||||||||||||||||||||||||||||||    
T  25948883 gacacgacaccaacacttataattacactgaattatgtgattttttcaaattatta 25948938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 14832162 - 14832092
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||| |||||||||| ||||| ||| |||||||||||||||||||||||| |||| ||| |||||    
T  14832162 gacacgacactgacacttgtaattacattgagttatgtgattttttcaaattattagctgtatcggcgtgt 14832092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 16789088 - 16788966
Alignment:
Q  90 catgtccgacag-gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtg 187  Q
    |||||||||||  ||||||||||| |||||| || |||||||||||||| ||||||||| |||||||||||| | |||  || | ||| |||||||| |     
T  16789088 catgtccgacactgacacgacaccaacacttataattacactgaattatatgatttttttaaattattaactatatcggtgtatcagtatccgtgtcata 16788989  T
Q  188 tccggtgtccgtatccgtgcttt 210  Q
    || |||||| |||||||||||||    
T  16788988 tctggtgtctgtatccgtgcttt 16788966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 35994744 - 35994829
Alignment:
Q  112 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtcc 197  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||| |||||||| | ||| | | ||| |||||||||||||||||    
T  35994744 cgacacttgtaattacactgaattatgtga-tttttcaaattattagctgtgtcggcttgtcattgtccatgtcgtgtccggtgtcc 35994829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 39756300 - 39756203
Alignment:
Q  101 ggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgta 200  Q
    |||||||||||||||||||||| ||| | | |||||||||||||||| |||||||||| | ||||| ||||     || |||||||||||| ||||||||    
T  39756300 ggacacgacaccgacacttgtaattatattaaattatgtgatttttttaaattattaattttgtcggcgtg-----tcagtgtcgtgtccgatgtccgta 39756206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 55213020 - 55212962
Alignment:
Q  108 acaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||||||||| || |||| |||||||||||||||| ||||||||||||||||||    
T  55213020 acaccgacacttgtaattgcactaaattatgtgattttttaaaattattaactgtgtcg 55212962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 3610691 - 3610602
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgt 195  Q
    |||| ||||||| ||| ||||||||| |||||| ||||||| |||||||||||||||| | ||||| ||| || ||||||||||||||||    
T  3610691 gacaacgacactggtaattacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtctgtgtcgtgtccggtgt 3610602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 7928509 - 7928449
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||| | || |||||||||||||||||||||||||||||||||| | ||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcg 7928449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 20503522 - 20503474
Alignment:
Q  108 acaccgacacttgtagttacactgaattatgtgattttttcaaattatt 156  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  20503522 acaccgacacttgtaattacactgaattatgtcattttttcaaattatt 20503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 14979222 - 14979175
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtg 171  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||    
T  14979222 ttacactgaattatgtgattttttcaaattattagctgtgtcggcgtg 14979175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 203
Target Start/End: Complemental strand, 11666006 - 11665905
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtat 201  Q
    ||||||||||||||| | || ||||||| |||| ||||||||| ||||||||||| |  |||||  |||||||| |  ||||||||||||||||| ||||    
T  11666006 acacgacaccgacacatataattacactaaattgtgtgattttatcaaattattagcgttgtcggtgtgttagtgtgtgtgtcgtgtccggtgtctgtat 11665907  T
Q  202 cc 203  Q
    ||    
T  11665906 cc 11665905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 4466600 - 4466704
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    |||||||| ||| | ||| ||||||||||||| ||||||| | ||||||||| | ||||||  |||| ||| | |||||| ||||||||||||||||||     
T  4466600 cgacaccggcacatatagctacactgaattatatgattttcttaaattattaccggtgtcggagtgtcagtgttcgtgtcatgtccggtgtccgtatcca 4466699  T
Q  205 tgctt 209  Q
    |||||    
T  4466700 tgctt 4466704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 205
Target Start/End: Complemental strand, 7171560 - 7171461
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    ||||||| ||||||||| |||||| ||||||| |||||||| |||||||  | |||||||| | ||| ||| |||||||||||||||||||| || ||||    
T  7171560 cgacaccaacacttgtaattacaccgaattatatgattttt-caaattacaagctgtgtcggcatgtcagtatccgtgtcgtgtccggtgtctgtgtccg 7171462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 8593196 - 8593136
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgatttttt-caaattattaactgtgtc 165  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||||| || |||||||    
T  8593196 cgacaccgacacttgtaattatactgaattatgtgattttttccaaattagtagctgtgtc 8593136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 215
Target Start/End: Complemental strand, 25064950 - 25064859
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgctttcatag 215  Q
    ||||||| ||||||||||||||||||||| |||| | |||||| ||||| | | || ||||||||||||||||| ||| ||||| ||||||||    
T  25064950 ttacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtccggtgtctgtacccgtg-tttcatag 25064859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 35312108 - 35312028
Alignment:
Q  111 ccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtcc 190  Q
    |||||||||||| |||||||||||||||| |  |||| |||||||||| ||||||||| | | ||| ||||||||||||||    
T  35312108 ccgacacttgtaattacactgaattatgtaacatttttaaattattaaatgtgtcgacatatcagtgtccgtgtcgtgtcc 35312028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 8789550 - 8789648
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgtatccgt 205  Q
    |||||||||||| | || |||||| ||||||||||||||| ||||||||| | | ||||||  |||     || |||| |||||||||||||||||||||    
T  8789550 cgacaccgacacatataattacacggaattatgtgattttctcaaattataagccgtgtcggtgtg-----tctgtgttgtgtccggtgtccgtatccgt 8789644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 199
Target Start/End: Original strand, 10318035 - 10318134
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-------tccgtgtcgtgtccggtgtccg 198  Q
    |||||||||||||| || ||||||| ||  |||||| ||||||||||||||| |||||||| ||||| |||       ||||||||||||||||||||||    
T  10318035 cgacaccgacacttatatttacactaaaa-atgtgactttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtgtcgtgtccggtgtccg 10318133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 206
Target Start/End: Complemental strand, 11610573 - 11610479
Alignment:
Q  113 gacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtg 206  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||| | |||| | ||||| ||| || |||| ||||| | |||||||| |||||    
T  11610573 gacacttgtaactacactgaattatgtgatttttttaaattattagcggtgttggcgtgtcagtatctgtgttgtgtctgatgtccgtacccgtg 11610479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 15314873 - 15314935
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    |||||||||| |||| | || ||||||| ||||||||||||||||||||||| ||| ||||||    
T  15314873 acacgacaccaacacatataattacactaaattatgtgattttttcaaattaataattgtgtc 15314935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 17005616 - 17005670
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||| |||||||||||| || |||||||||||||| ||||||| |||||||||||    
T  17005616 acacaacaccgacacttataattacactgaattatatgattttatcaaattatta 17005670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 23870579 - 23870625
Alignment:
Q  126 acactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||| ||||||||||||||||||| | ||||||||||||    
T  23870579 acactgaattatatgattttttcaaattattagcggtgtcgacgtgt 23870625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 34307786 - 34307880
Alignment:
Q  112 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgt 205  Q
    |||||||| || |||||||||| ||||||||||| ||||||||||| | |||||  |||||| || || ||||| |||||||||| ||| |||||    
T  34307786 cgacacttataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgttcgtgtctgtgtcatgtccggtgttcgtgtccgt 34307880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 40052367 - 40052325
Alignment:
Q  130 tgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||||||||||||||||||| |||||||| |||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgtcggcgtgt 40052325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 190
Target Start/End: Complemental strand, 9800103 - 9800014
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtcc 190  Q
    ||||||||||||||||||  | |||||| ||||||||| ||||| |||||||||||   |||||| ||||| ||| | ||||||||||||    
T  9800103 gacacgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcc 9800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 24633403 - 24633460
Alignment:
Q  108 acaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    |||||||||| | || ||||| ||||||| ||||||||| ||||||||||||||||||    
T  24633403 acaccgacacatataattacattgaattacgtgatttttccaaattattaactgtgtc 24633460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 4201437 - 4201397
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgt 164  Q
    ||||||| |||||||||||||||||||||||||||| ||||    
T  4201437 ttacacttaattatgtgattttttcaaattattaacggtgt 4201397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 7614415 - 7614475
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||  | || ||| |||||||||||||||||| | ||||||||||||||||||    
T  7614415 cgacaccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcg 7614475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 8039818 - 8039886
Alignment:
Q  90 catgtccgacag-gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||||  |||||||||||||||| | || |||||||||||||| | ||||| |||||||||||    
T  8039818 catgtccgacaccgacacgacaccgacacatataattacactgaattatataattttctcaaattatta 8039886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 16192746 - 16192810
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||| | |||| | || |||||||||||||||| ||||| ||||||||||||| ||||||    
T  16192746 gacacgacatcaacacatataattacactgaattatgttattttctcaaattattaacggtgtcg 16192810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 1550203 - 1550148
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||| ||||| | || |||||||||||  |||||||||||||||||||||    
T  1550203 gacacgacactgacacctataattacactgaatagtgtgattttttcaaattatta 1550148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 195
Target Start/End: Original strand, 25652050 - 25652121
Alignment:
Q  125 tacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgt 195  Q
    ||||||||||||| | ||||| ||||||||||| | |||| | ||||||||| ||||||||||||| |||||    
T  25652050 tacactgaattatatcattttctcaaattattatccgtgttggcgtgttagtgtccgtgtcgtgtctggtgt 25652121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 33359820 - 33359761
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    |||||| |||||||||| ||||||| || |||||||  |||||||||||||| |||||||    
T  33359820 cgacactgacacttgtatttacactaaaatatgtgaccttttcaaattattagctgtgtc 33359761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 38731277 - 38731226
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||||| | ||  ||||||||||||||||||||||| |||||||||    
T  38731277 cgacaccgacacatataactacactgaattatgtgattttttaaaattatta 38731226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 40993335 - 40993402
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtga-ttttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||| | || |||||||||||||||||| |||||| ||||||||| | ||||||| ||||    
T  40993335 cgacaccgacacatataattacactgaattatgtgattttttttaaattattagcggtgtcgaggtgt 40993402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 149
Target Start/End: Complemental strand, 3865732 - 3865690
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttca 149  Q
    |||||||||||||||| ||| |||||||||||||| |||||||    
T  3865732 gacaccgacacttgtaattatactgaattatgtgagtttttca 3865690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 16789668 - 16789710
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||    
T  16789668 ttacactgaattatgtcattttctcaaattattatctgtgtcg 16789710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 22774066 - 22774136
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||| ||||||||||||| || |||||||||| ||||||| ||| || ||||||||   ||||||||||||    
T  22774066 gacatgacaccgacacttataattacactgaaatatgtgactttgtctaattattagtggtgtcgacgtgt 22774136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 32804558 - 32804600
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||| |||||||||||||| ||||||||||||| ||||||    
T  32804558 ttacactaaattatgtgattttctcaaattattaacggtgtcg 32804600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 8842318 - 8842285
Alignment:
Q  176 ttccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    ||||||||||| ||||||||||||||||||||||    
T  8842318 ttccgtgtcgtatccggtgtccgtatccgtgctt 8842285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 157
Target Start/End: Complemental strand, 11252019 - 11251986
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||||||||||||||| |||||||||||    
T  11252019 ttacactgaattatgtgattttctcaaattatta 11251986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 157
Target Start/End: Complemental strand, 29508485 - 29508452
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||||||| |||||||||||||||||||    
T  29508485 ttacactgaattatatgattttttcaaattatta 29508452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 5339161 - 5339101
Alignment:
Q  112 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||||  ||||| | |||||||||||||| |||||||||||||  ||||| |||||    
T  5339161 cgacacttgtttttacattaaattatgtgattttctcaaattattaacaatgtcggcgtgt 5339101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 11313796 - 11313860
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||||  |||| | || ||||||| |||||||||||||| ||||||||||| | ||||||    
T  11313796 gacacgacactaacacatataattacactaaattatgtgattttctcaaattattagcagtgtcg 11313860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 11493379 - 11493427
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||||||||||||| ||| |||||||   ||||||||||||    
T  11493379 ttacactgaattatgtgattttctcacattattagtggtgtcgacgtgt 11493427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 32400708 - 32400771
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||| |||||||||| |||||   |||||||| || |||||||||||||| |||||||| |||||    
T  32400708 cgacacggacacttgtaattaca---aattatgtaatcttttcaaattattagctgtgtcgccgtgt 32400771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 41319328 - 41319376
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||| |||||||||| |||||||||||||||||   ||||||||||||    
T  41319328 ttacattgaattatgtcattttttcaaattattattggtgtcgacgtgt 41319376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 106 - 205
Target Start/End: Complemental strand, 46741 - 46641
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| | | ||||||||||||||| ||||||| ||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccgatgtccgtgtccg 46642  T
Q  205 t 205  Q
    |    
T  46641 t 46641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 2572052 - 2572156
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||  |||||||||||||  || |||||||||||||| ||||||||     
T  2572052 gacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtccagtgtccgtg 2572151  T
Q  201 tccgt 205  Q
    |||||    
T  2572152 tccgt 2572156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 22652039 - 22651935
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||||||||||||| |||||||| ||||| ||| |||||||||||||||||||| ||     
T  22652039 gacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcagtg 22651940  T
Q  201 tccgt 205  Q
    |||||    
T  22651939 tccgt 22651935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 107 - 209
Target Start/End: Original strand, 4298887 - 4298989
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgt 205  Q
    |||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||| |||||| |||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtcc-gtgtccatatccgt 4298985  T
Q  206 gctt 209  Q
    ||||    
T  4298986 gctt 4298989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 55 - 165
Target Start/End: Complemental strand, 25566954 - 25566841
Alignment:
Q  55 tcaatgtatgaagcacaaacactcctcagattaggcatgtcc--gacagga-cacgacaccgacacttgtagttacactgaattatgtgattttttcaaa 151  Q
    ||||| ||||||||||| ||||||||| |||||||| |||||  ||||  | ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25566954 tcaatctatgaagcacagacactcctcggattaggcgtgtcccggacaccaacacgacaccgacacttgtaattacactgaattatgtgattttttcaaa 25566855  T
Q  152 ttattaactgtgtc 165  Q
    |||||| |||||||    
T  25566854 ttattagctgtgtc 25566841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 29510300 - 29510396
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtcc 197  Q
    ||||| ||||||||||||||| ||| |||||||| ||||||||||||||||||||| |||||||| ||||| ||| |||||||||||||||||||||    
T  29510300 gacactacaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcc 29510396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 199
Target Start/End: Original strand, 22197725 - 22197836
Alignment:
Q  90 catgtccgacaggacac-gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtg 187  Q
    ||||||||||| ||||| ||||| |||||||||| ||||||| |||||||||| ||||||||||||||| |||||| | ||||||||| || ||||||||    
T  22197725 catgtccgacacgacactgacactgacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtg 22197824  T
Q  188 tccggtgtccgt 199  Q
    ||||||||||||    
T  22197825 tccggtgtccgt 22197836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 102 - 209
Target Start/End: Original strand, 13436960 - 13437068
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    ||||||||||||||||||||  ||||  |||||||||||||||||||||||||||| |||||||| ||||| ||| ||| |||| |||||||||||| |     
T  13436960 gacacgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtccatg 13437059  T
Q  201 tccgtgctt 209  Q
    |||||||||    
T  13437060 tccgtgctt 13437068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 41838131 - 41838227
Alignment:
Q  114 acacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    |||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||| ||| ||||| |||||||   |||||||||||||||||    
T  41838131 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtcttatgtccgtatccgtgctt 41838227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 11927083 - 11927190
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttag-ttccgtgtcgtgtccggtgtccgtat 201  Q
    ||||||||||||||| | || |||||||||||||||||||||| ||||||||||||| |||||| ||| ||||  ||||||||||||  |||||||||||    
T  11927083 acacgacaccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtcggcgtattagcatccgtgtcgtgtttggtgtccgtat 11927182  T
Q  202 ccgtgctt 209  Q
    | ||||||    
T  11927183 ctgtgctt 11927190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 11944727 - 11944620
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttag-ttccgtgtcgtgtccggtgtccgtat 201  Q
    ||||||||||||||| | || ||||||||| |||||||||||| ||||||||||||| |||||| ||||||||  ||||||||||||  |||||||||||    
T  11944727 acacgacaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggcgtgttagcatccgtgtcgtgtttggtgtccgtat 11944628  T
Q  202 ccgtgctt 209  Q
    | ||||||    
T  11944627 ctgtgctt 11944620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 31557054 - 31556956
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgt 205  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||| |||  || |||| ||||||||||||||||||||    
T  31557054 gacaccgaaacttgtaattacactgaattatgtgat-ttttcaaattattaactgtgtcggcgtgtcagtgaccatgtcatgtccggtgtccgtatccgt 31556956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 20873128 - 20873042
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccg 191  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||| || ||||| ||||| ||| |||||||||||||||    
T  20873128 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtccg 20873042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 116 - 209
Target Start/End: Complemental strand, 28642457 - 28642363
Alignment:
Q  116 acttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    |||||||||||||||||||||||| | ||||||||||||||||| ||||| | |||| | | ||||||||||||||| |||||||||||||||||    
T  28642457 acttgtagttacactgaattatgtaaatttttcaaattattaaccgtgtcaatgtgtcattgtccgtgtcgtgtccgatgtccgtatccgtgctt 28642363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 41831946 - 41832000
Alignment:
Q  112 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41831946 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 41832000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 4673426 - 4673525
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgt 205  Q
    ||||| || ||||||| |||||||||||| | ||||||||||||||||||| |||||||| ||||| ||| || |||||||||||| |||||||||||||    
T  4673426 gacactgatacttgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtatccgt 4673525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 22596053 - 22595955
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgtatccgt 205  Q
    ||||||| ||||||||| |||||||||||||||| ||||||| ||||||||| |||||||| ||||     || |||| |||||||||||||||||||||    
T  22596053 cgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtg-----tcagtgttgtgtccggtgtccgtatccgt 22595959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 29447106 - 29447176
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||| |||||||||||||||||||||| |||||||||||||||| |||||||||||  |||||||||||||    
T  29447106 gacatgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagttgtgtcgacgtgt 29447176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 24669492 - 24669388
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    ||||||||||||||||| |||||||||||||||| ||||  ||||||||||||| |||||  ||||| ||| || ||||||||||| ||||||||||||     
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtcgtgtcc-gtgtccgtatcca 24669394  T
Q  205 tgcttt 210  Q
    ||||||    
T  24669393 tgcttt 24669388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 24858074 - 24857968
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgatttttt---caaattattaactgtgtcgacgtgt-tagttccgtgtcgtgtccggtgtcc 197  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||   ||||||||||||||||||| |||||  |  ||||||||||||||||||| |    
T  24858074 gacacgacaacgacacttgta-ttacactgaattatgtgatttttttttcaaattattaactgtgtcggcgtgtccatgtccgtgtcgtgtccggtgttc 24857976  T
Q  198 gtatccgt 205  Q
    || |||||    
T  24857975 gtgtccgt 24857968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 209
Target Start/End: Original strand, 25192350 - 25192451
Alignment:
Q  109 caccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgc 207  Q
    ||||||||||| || ||| |||||||||||| | ||||||||||||||| |||||||| ||||| ||| ||||| ||||||||| ||||||||| |||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtccgtattcgtgc 25192449  T
Q  208 tt 209  Q
    ||    
T  25192450 tt 25192451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 4948711 - 4948660
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4948711 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 4948660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 199
Target Start/End: Original strand, 18170482 - 18170576
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||| ||||| ||||| |||||||||| ||||||||||||| |||| ||||||| ||||| ||| ||||||||||| ||||| |||||    
T  18170482 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtgaccggtatccgt 18170576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 199
Target Start/End: Original strand, 18634050 - 18634144
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||| ||||| ||||| |||||||||| ||||||||||||| |||| ||||||| ||||| ||| ||||||||||| ||||| |||||    
T  18634050 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtgaccggtatccgt 18634144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 28745561 - 28745448
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    ||||||||| ||||| ||||||||||| |||||||||||| ||||||||||||||| | ||||||| || | | | |||||||||||||||  || ||||    
T  28745561 gacacgacatcgacatttgtagttacattgaattatgtgaatttttcaaattattagcagtgtcgatgtatcattatccgtgtcgtgtccgacgttcgta 28745462  T
Q  201 tccgtgctttcatag 215  Q
    |||||| ||||||||    
T  28745461 tccgtg-tttcatag 28745448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 8343032 - 8342971
Alignment:
Q  105 acgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||| || |||||    
T  8343032 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcg 8342971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 15816126 - 15816195
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||||||||||| || ||||||| ||||||||||||||||||||||||||  ||||||| |||||    
T  15816126 acacgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgt 15816195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 36450754 - 36450833
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtc 184  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||||||||  ||||||| ||||| ||| ||||||||    
T  36450754 cgacacctacacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 36450833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 5813651 - 5813585
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||||||||||| ||||||| || ||||||| ||||||||||||||| |||||||| |||||    
T  5813651 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgt 5813585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 30271287 - 30271357
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||| | |||||||| |||||||| |||||||||||||||||||| |||| |||||||| |||||    
T  30271287 gacacgacactggcacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgt 30271357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 36934711 - 36934629
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgt 205  Q
    ||||| ||||||||||||||||||| |||||||| | |||||||||||||||| ||||||||||||  |||||  ||||||||    
T  36934711 ttacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgtttggtgtttgtatccgt 36934629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 8343376 - 8343315
Alignment:
Q  105 acgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||| |||||||||| ||||||| |||||||||||||||||||||||||| || |||||    
T  8343376 acgacactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcg 8343315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 24362198 - 24362302
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    |||||||||  ||||| | || |||||||||||||||||||| | ||||||||||| | |||||| |||||  || || ||||||| |||||||||||||    
T  24362198 gacacgacattgacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgta 24362297  T
Q  201 tccgt 205  Q
    |||||    
T  24362298 tccgt 24362302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 24613579 - 24613520
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||||||||||| ||||||||    
T  24613579 cgacaccgacacttgtaattacacttaattatgtgat-ttttcaaattattagctgtgtcg 24613520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 40332248 - 40332200
Alignment:
Q  108 acaccgacacttgtagttacactgaattatgtgattttttcaaattatt 156  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  40332248 acaccgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 21465475 - 21465412
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    ||||||||||| ||||||||| |||||  ||||||| ||||||||||||||||||| |||||||    
T  21465475 gacacgacaccaacacttgtaattacatcgaattatatgattttttcaaattattagctgtgtc 21465412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 30077387 - 30077438
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||| |||||||||| ||||||||||||||||||| ||||||||||||||    
T  30077387 cgacacggacacttgtaattacactgaattatgtgatgttttcaaattatta 30077438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 106 - 199
Target Start/End: Original strand, 926788 - 926882
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||||||||| || ||||||||||  ||| |||||| |||||||||||   |||| | ||||| ||| |||||||||||||||||||||||    
T  926788 cgacaccgacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 926882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 18407772 - 18407718
Alignment:
Q  112 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||| ||||||||    
T  18407772 cgacacttgtaattacactgaattatgtgatttttttgaattattagctgtgtcg 18407718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 34897144 - 34897078
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||| |||||| | || |||||||||||||||||||||| ||||||||||| | ||||||||||||    
T  34897144 cgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgt 34897078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 17468497 - 17468558
Alignment:
Q  95 ccgacaggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatt 156  Q
    |||||| ||||||||||| ||||||||| |||||| | |||||||||||||| |||||||||    
T  17468497 ccgacacgacacgacaccaacacttgtaattacaccgcattatgtgatttttacaaattatt 17468558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 949285 - 949328
Alignment:
Q  127 cactgaattatgtgattttttcaaattattaactgtgtcgacgt 170  Q
    |||| |||||| ||||||||||||||||||||||||||||||||    
T  949285 cacttaattatttgattttttcaaattattaactgtgtcgacgt 949328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 3677820 - 3677761
Alignment:
Q  131 gaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtc 189  Q
    ||||||||||||||||| |||||||||| |||||||| |||| ||| |||||||||||||    
T  3677820 gaattatgtgattttttaaaattattaattgtgtcgatgtgtcagtatccgtgtcgtgtc 3677761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 4786338 - 4786404
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||| | || |||||||||||||||||||||| | ||||||||||  |||||| |||||    
T  4786338 cgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgt 4786404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 13844596 - 13844662
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||| | || ||||||| |||||||||||||| ||||||||||| | |||||| |||||    
T  13844596 cgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgt 13844662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 157
Target Start/End: Original strand, 20679396 - 20679446
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||| || |||||||||| ||||||||||| |||||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattatta 20679446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 31514930 - 31514880
Alignment:
Q  108 acaccgacacttgtagttacactgaattatgtgatt-ttttcaaattatta 157  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  31514930 acaccaacacttgtagttacgctgaattatgtgatttttttcaaattatta 31514880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 44067589 - 44067481
Alignment:
Q  92 tgtccgacaggacac-gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtc 189  Q
    ||||||||| ||||| ||||| ||||||| || |||||||| ||||||| ||||| ||||||||||| | |||||| ||||| ||| || |||| |||||    
T  44067589 tgtccgacacgacaccgacac-gacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtcggtgtggtgtc 44067491  T
Q  190 cggtgtccgt 199  Q
     |||||||||    
T  44067490 tggtgtccgt 44067481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 13018322 - 13018270
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt 176  Q
    ||||||| |||||||||||||| ||||||||||||| || | |||||||||||    
T  13018322 ttacactaaattatgtgattttgtcaaattattaacggtattgacgtgttagt 13018270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 16867191 - 16867261
Alignment:
Q  92 tgtccgacaggacacgacaccgacacttgtagttacactgaattatg---tgattttttcaaattattaac 159  Q
    |||||||||  ||||||||||||||||| || ||||||| |||||||   | |||||||||||||||||||    
T  16867191 tgtccgacacaacacgacaccgacacttataattacactaaattatgttattattttttcaaattattaac 16867261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 28384990 - 28385054
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||| ||||||||||| | || ||||||||||||||| ||||| |||| ||||||||| ||||||    
T  28384990 gacatgacaccgacacatataattacactgaattatgagatttattcatattattaacggtgtcg 28385054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 40332192 - 40332160
Alignment:
Q  177 tccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    |||||||||||||||||||||||||||||||||    
T  40332192 tccgtgtcgtgtccggtgtccgtatccgtgctt 40332160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 3025610 - 3025559
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||| ||||| | || |||||||||||||||||||||| |||||||||||    
T  3025610 cgacactgacacctataattacactgaattatgtgattttctcaaattatta 3025559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 5307124 - 5307054
Alignment:
Q  101 ggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||||||||||||| |  || || |||||||||| |||||| |||||||||| | ||||||||||||    
T  5307124 ggacacgacaccgacacttatgatttcattgaattatgtcattttt-caaattattatcagtgtcgacgtgt 5307054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 193
Target Start/End: Complemental strand, 27213601 - 27213518
Alignment:
Q  111 ccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggt 193  Q
    ||||||| | || ||||| |||||||||||||||| | ||||||||| | |||||| |||||  || |||||||||||||||||    
T  27213601 ccgacacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtccggt 27213518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 31109518 - 31109597
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtc 184  Q
    |||||| ||||| | |||||| |||||||| | ||||||| ||||||||||||| |||||| ||||| ||| ||||||||    
T  31109518 cgacactgacacatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagtgtccgtgtc 31109597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 172
Target Start/End: Original strand, 31236580 - 31236643
Alignment:
Q  109 caccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||| | || ||||| |||||||||||||||| ||||||||||| | |||||| |||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgt 31236643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 11803321 - 11803259
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    |||| ||||| |||| | || |||||||||||||||||||||| | ||||||||||| |||||    
T  11803321 acacaacaccaacacatataattacactgaattatgtgattttcttaaattattaacagtgtc 11803259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 14134757 - 14134707
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||  | || |||||||||||||||||||||| |||||||||||    
T  14134757 gacaccgacatatataattacactgaattatgtgattttctcaaattatta 14134707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 7442902 - 7442853
Alignment:
Q  108 acaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||| ||||||||| |||||||||||||||| ||||| | |||||||||    
T  7442902 acaccaacacttgtaattacactgaattatgtaattttatgaaattatta 7442853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 27101553 - 27101508
Alignment:
Q  127 cactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||| |||||||||||||||||||||||||| | |||||| |||||    
T  27101553 cactaaattatgtgattttttcaaattattagcggtgtcggcgtgt 27101508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 33405384 - 33405437
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaac 159  Q
    |||||||||||| | || ||||||| ||||||||| |||| |||||||||||||    
T  33405384 cgacaccgacacatataattacactaaattatgtgtttttctcaaattattaac 33405437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 12936517 - 12936557
Alignment:
Q  132 aattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||||| |||||||||||||  |||||||||||    
T  12936517 aattatgtgattttatcaaattattaacaatgtcgacgtgt 12936557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 26902174 - 26902214
Alignment:
Q  105 acgacaccgacacttgtagttacactgaattatgtgatttt 145  Q
    ||||||||||||| | || ||||||||||||||||||||||    
T  26902174 acgacaccgacacatataattacactgaattatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 35519833 - 35519865
Alignment:
Q  132 aattatgtgattttttcaaattattaactgtgt 164  Q
    |||||||||||||||||||||||||| ||||||    
T  35519833 aattatgtgattttttcaaattattagctgtgt 35519865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 39954297 - 39954345
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||| |||||||||||||| ||||||||||| | |||||| |||||    
T  39954297 ttacactaaattatgtgattttctcaaattattagcggtgtcggcgtgt 39954345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 42874579 - 42874515
Alignment:
Q  108 acaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||| |||||||||  ||||| |||||||||| ||||| ||||| | ||||| ||||||||||||    
T  42874579 acactgacacttgtgattacattgaattatgtcattttctcaaaatgttaacggtgtcgacgtgt 42874515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 106 - 205
Target Start/End: Original strand, 23292986 - 23293086
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||||| | | ||||||||||||||||||||||| ||||    
T  23292986 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccg 23293085  T
Q  205 t 205  Q
    |    
T  23293086 t 23293086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 11651142 - 11651238
Alignment:
Q  114 acacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    |||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||| ||| ||||| |||||||   |||||||||||||||||    
T  11651142 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtcttatgtccgtatccgtgctt 11651238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 190
Target Start/End: Original strand, 14126064 - 14126196
Alignment:
Q  61 tatgaagcacaaacactcctcagattaggcatgtccgaca-ggacacgacacc-gacacttgtagttacactgaattatgtgattttttcaaattattaa 158  Q
    ||||||||||| |||||| || |||||||| ||||||||| |||||||| ||  ||||||| || |||||||||||||||||| ||| ||||||||||||    
T  14126064 tatgaagcacatacactcttcggattaggcgtgtccgacacggacacgagacatgacacttataattacactgaattatgtgactttatcaaattattaa 14126163  T
Q  159 ctgtgtcgacgtgttagt-tccgtgtcgtgtcc 190  Q
    | |||||| ||||||||| || |||||||||||    
T  14126164 cagtgtcggcgtgttagtgtctgtgtcgtgtcc 14126196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 103 - 205
Target Start/End: Original strand, 27706174 - 27706277
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtat 201  Q
    |||||||||  ||||||||| ||||||| |||||||||||||||| |||||||||| ||||||||||||| ||| ||| ||||||||| ||||||||| |    
T  27706174 acacgacactcacacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtctggtgtccgtgt 27706273  T
Q  202 ccgt 205  Q
    ||||    
T  27706274 ccgt 27706277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 106 - 199
Target Start/End: Complemental strand, 21945562 - 21945468
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||| | ||| ||| || ||||| ||||||||||||||    
T  21945562 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtcatgtccggtgtccgt 21945468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 102 - 209
Target Start/End: Complemental strand, 28084585 - 28084476
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgatt-ttttcaaattattaactgtgtcgacgtgttag-ttccgtgtcgtgtccggtgtccgt 199  Q
    |||||||||| |||||||||| ||||| |||||||||||||| |||||||||| ||| |||||||| ||||| ||  || ||||||||||||||||||||    
T  28084585 gacacgacacagacacttgtaattacattgaattatgtgatttttttcaaattcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtccggtgtccgt 28084486  T
Q  200 atccgtgctt 209  Q
    ||| ||||||    
T  28084485 atctgtgctt 28084476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 3947762 - 3947826
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||| |||||||||| ||||||||||||||| |||||||||||||||||| ||||||||    
T  3947762 gacacgacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgtcg 3947826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 106 - 205
Target Start/End: Original strand, 12895274 - 12895374
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    |||||||||||||| || ||||||  ||||||||||||||||||||||||||  ||||||| ||||| | | | |||||||| |||||||||||||||||    
T  12895274 cgacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtcattgttcgtgtcgtatccggtgtccgtatccg 12895373  T
Q  205 t 205  Q
    |    
T  12895374 t 12895374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 11596348 - 11596403
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  11596348 gacacgacacctacacttgtaattacactgaattatgtgattttttcaaattatta 11596403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 19482731 - 19482636
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtc 196  Q
    ||||||||||| ||||||||| |||||| |||||||||||| ||||||||||||||  ||||||| ||||| ||| || |||||||||| ||||||    
T  19482731 gacacgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtgtc 19482636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 35157986 - 35158085
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgt 205  Q
    ||||||||||||| || ||||||| ||||||||||||||| ||||||||||  || |||| ||||| ||| ||||||| ||||||||||||||| |||||    
T  35157986 gacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgtgtccgt 35158085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 12895112 - 12895182
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| |||| ||| |||||    
T  12895112 gacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgt 12895182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 24613697 - 24613767
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||| |||||||||||||||| ||||| |||||||||||||||| |||||||||||  |||||||||||||    
T  24613697 gacatgacaccgacacttgtacttacattgaattatgtgattttctcaaattattagttgtgtcgacgtgt 24613767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 30299008 - 30298926
Alignment:
Q  104 cacgacaccgacacttgtagttacactgaattatgtga-ttttttcaaattattaactgtgtcgacgtgttagt-tccgtgtc 184  Q
    ||||||||||||||||||| |||||||||||||||| | |||||||||||||||| |||||||| ||||| ||| ||||||||    
T  30299008 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 30298926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 30327876 - 30327794
Alignment:
Q  104 cacgacaccgacacttgtagttacactgaattatgtga-ttttttcaaattattaactgtgtcgacgtgttagt-tccgtgtc 184  Q
    ||||||||||||||||||| |||||||||||||||| | |||||||||||||||| |||||||| ||||| ||| ||||||||    
T  30327876 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 30327794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 29205501 - 29205452
Alignment:
Q  108 acaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29205501 acaccgacacttgtaattacactgaattatgtgattttttcaaattatta 29205452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 28964248 - 28964299
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  28964248 cgacacagacacttgtaattacactgaattatgtgattttttcaaattatta 28964299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 49431085 - 49431018
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgatt-ttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||||| || |||||||||||||||||||| |||||||||||||| |||||||| |||||    
T  49431085 cgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgt 49431018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 50280956 - 50280874
Alignment:
Q  92 tgtccgacaggacacgacaccgacacttgtagttacac--tgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||| |||||||||||| |||||||| ||||||  | |||||||||| ||||||||||||||| |||||||| |||||    
T  50280956 tgtccgacacgacacgacaccggcacttgtaattacacacttaattatgtgaatttttcaaattattagctgtgtcggcgtgt 50280874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 54580023 - 54580074
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  54580023 cgacaccgacacttataattacactgaattatgtgattttttcaaattatta 54580074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 6485613 - 6485663
Alignment:
Q  108 acaccgacacttgtagttacactgaattatgtgattttttcaaattattaa 158  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattattaa 6485663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 107 - 209
Target Start/End: Original strand, 752934 - 753037
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtga-ttttttcaaattattaactgtgtcgacgtgttag-ttccgtgtcgtgtccggtgtccgtatccg 204  Q
    |||||| ||||||||| |||||||||||||||||| |||||| ||||||||| ||||||||  |||||||  |  ||||||||||| ||||| |||||||    
T  752934 gacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgttagagtatgtgtcgtgtcc-gtgtctgtatccg 753032  T
Q  205 tgctt 209  Q
    |||||    
T  753033 tgctt 753037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 2361975 - 2362035
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||||| || ||||||| |||||||| ||||||||||||||||| ||||||||    
T  2361975 cgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcg 2362035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 103 - 190
Target Start/End: Original strand, 16303263 - 16303351
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtcc 190  Q
    |||||||||||||||||||| ||||||| |||||| | ||||||||||| ||||| || ||||| ||||| ||| ||||| ||||||||    
T  16303263 acacgacaccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtgtccgtatcgtgtcc 16303351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 20633535 - 20633444
Alignment:
Q  112 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgt 205  Q
    ||||||||||| ||||| ||||||||||   ||||||||||||||| | |||||||||||| ||| ||||| ||||||| ||||||||| |||||    
T  20633535 cgacacttgtaattacattgaattatgt---tttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgtgtccgt 20633444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 38847012 - 38847072
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||| |||||||||| ||||||||||| || ||||||||||||||||||| ||||||||    
T  38847012 cgacactgacacttgtaattacactgaataatatgattttttcaaattattagctgtgtcg 38847072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 12797338 - 12797388
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  12797338 cgacaccgacacttgtaattacactgaattatgtga-tttttcaaattatta 12797388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 196
Target Start/End: Original strand, 40179636 - 40179727
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtc 196  Q
    |||||||||| | | || |||||||||||||||||||||||||||| ||||||  ||||| |||||| ||| |||||||| ||| |||||||    
T  40179636 cgacaccgacgcatataattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgtgtcatgttcggtgtc 40179727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 42640588 - 42640519
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgatt---ttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||||||||||| ||||||||||||||||||||   |||||||||||| | |||||||| |||||    
T  42640588 cgacaccgacacttgtaattacactgaattatgtgatttttttttcaaattatcagctgtgtcggcgtgt 42640519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 51701321 - 51701258
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    ||||||||||  ||||||||| ||||||| |||||||| ||||||||||||||||| |||||||    
T  51701321 gacacgacactaacacttgtaattacactcaattatgtaattttttcaaattattagctgtgtc 51701258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 4383430 - 4383361
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||  ||| |||||||||    
T  4383430 gacacgacactgacatttgtaattacactgaattatgtgat-ttttcaaattattagttgtatcgacgtgt 4383361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 715608 - 715677
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtga-ttttttcaaattattaactgtgtcgacgtgttag 175  Q
    |||||| ||||||||| |||||||||||||||||| |||||| ||||||||| ||||||||  |||||||    
T  715608 gacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgttag 715677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 47264044 - 47263979
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||| ||||| ||||| |||||| |||||||||||||||| |||||||||| || |||||||||||    
T  47264044 gacatcgacatttgtaattacacagaattatgtgatttttacaaattattagctatgtcgacgtgt 47263979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 8423718 - 8423778
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||||| || || |||||||||||||||||||||| ||||||||||| | ||||||    
T  8423718 cgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgtcg 8423778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 24343548 - 24343472
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttag-ttccgtgtcgtgtccggtgtccgt 199  Q
    |||||||||||||||| ||||| ||||||||||| | |||||| |||||  |  |||||||||||||||||||||||    
T  24343548 ttacactgaattatgtaattttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgt 24343472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 209
Target Start/End: Original strand, 5775349 - 5775464
Alignment:
Q  97 gacaggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt----tccgtgtcgtgtccgg 192  Q
    |||| |||| ||||||||||| | || ||||||| |||||||||||||| ||||||||||||  ||||||  |||| |||    |||||||||||||| |    
T  5775349 gacacgacatgacaccgacacatataattacacttaattatgtgattttctcaaattattaatggtgtcg-tgtgtcagtagtgtccgtgtcgtgtcctg 5775447  T
Q  193 tgtccgtatccgtgctt 209  Q
    ||||| ||| |||||||    
T  5775448 tgtccatattcgtgctt 5775464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 16073453 - 16073403
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||||||| ||||||||||||||| || |||||||||||||||    
T  16073453 cgacaccgacacttgtaattacactgaattatgcga-tttttcaaattatta 16073403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 22440618 - 22440661
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcga 167  Q
    |||||||||||||||||||||| ||||||||||||| |||||||    
T  22440618 ttacactgaattatgtgattttctcaaattattaacggtgtcga 22440661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 30982874 - 30982929
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||||||||||| || |||||||||| ||||||||||| |||||| ||||    
T  30982874 gacacgacaccgacacttataattacactgaaatatgtgattttctcaaatcatta 30982929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 28000738 - 28000796
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgatt-ttttcaaattattaac 159  Q
    |||| |||||||||||||||| |||||||||||||| ||||| |||| |||||||||||    
T  28000738 gacatgacaccgacacttgtaattacactgaattatatgattattttaaaattattaac 28000796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 209
Target Start/End: Complemental strand, 28720924 - 28720832
Alignment:
Q  116 acttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    |||||||||||||||| ||||| ||| ||||||||||||||| |||||||| | ||| ||| | |||||||||||| ||||| |||| |||||||    
T  28720924 acttgtagttacactgcattatatga-tttttcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgtcc-gtgtctgtatacgtgctt 28720832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 191
Target Start/End: Complemental strand, 40481687 - 40481610
Alignment:
Q  114 acacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccg 191  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||  ||| ||| ||||| ||| || ||||||||||||    
T  40481687 acacttgtaattacactgaattatgtgat-ttttcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtccg 40481610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 6879465 - 6879510
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaa 151  Q
    ||||||||||||||||| ||||||| ||||||||||||||| ||||    
T  6879465 cgacaccgacacttgtaattacacttaattatgtgatttttccaaa 6879510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 24999085 - 24999044
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    |||||||||||| ||||||||||||||||||| |||||||||    
T  24999085 ttacactgaattgtgtgattttttcaaattatcaactgtgtc 24999044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 36635365 - 36635292
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtc 196  Q
    |||||||||||||||||||||| |||||||||||   |||| | ||||| ||| |||| |||||||||||||||    
T  36635365 ttacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccggtgtc 36635292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 4672085 - 4672145
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||| | ||| ||||||||||||||| |||||  |||||||||| ||||||||    
T  4672085 cgacaccgacacatatagctacactgaattatgtaattttcccaaattattagctgtgtcg 4672145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 5414168 - 5414264
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtcc 197  Q
    ||||||||||||| || | || |||||||| ||| ||||||||| | |||  |||| |||||||| |||||  || |||||||||||||||||||||    
T  5414168 gacacgacaccgatacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccgtgtccgtgtcgtgtccggtgtcc 5414264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 11931343 - 11931279
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||| |||| |||||| | || ||||||| |||||||||||||||||| ||||||||| ||||||    
T  11931343 gacatgacatcgacacatatatttacactaaattatgtgattttttcatattattaacggtgtcg 11931279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 12628617 - 12628688
Alignment:
Q  138 gtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    ||||||||||||||||||||||||||||| | ||| ||| || ||||| ||||| || |||||||||||||||    
T  12628617 gtgattttttcaaattattaactgtgtcggcatgtcagtgtcagtgtcatgtcc-gtatccgtatccgtgctt 12628688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 20521873 - 20521941
Alignment:
Q  130 tgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtcc 197  Q
    |||||||||||||||| ||||||||||| | || ||| ||||| ||| ||||||||||||| |||||||    
T  20521873 tgaattatgtgattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtcgtgtctggtgtcc 20521941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 848009 - 847918
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtcc 197  Q
    |||||||||||||||| ||| | |||||||||| ||||| ||||||||||| | |  ||| ||||| ||| || ||||||||||||| ||||    
T  848009 gacaccgacacttgtaattatagtgaattatgtaattttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccggggtcc 847918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 159
Target Start/End: Complemental strand, 903963 - 903928
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaac 159  Q
    |||||||||||||||||||||| |||||||||||||    
T  903963 ttacactgaattatgtgattttctcaaattattaac 903928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 4157208 - 4157158
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||||||| || |||| ||||||||||| ||||||||||||||    
T  4157208 cgacaccgacacttgtaattgcactaaattatgtgat-ttttcaaattatta 4157158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 7251663 - 7251725
Alignment:
Q  142 ttttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    |||||||||||||||| |||||||| |||     ||| |||| |||||||||||||||||||||||||    
T  7251663 ttttttcaaattattagctgtgtcggcgt-----ttctgtgttgtgtccggtgtccgtatccgtgctt 7251725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 15029824 - 15029773
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||| |||| | || ||||||||||||||||||| ||||||||||||||    
T  15029824 cgacaccaacacatataattacactgaattatgtgatattttcaaattatta 15029773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 22234886 - 22234957
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtga-ttttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||||||| |  | |||||||||||||||||| |||||||||||| ||| | |||||| |||||    
T  22234886 gacacgacaccgacacatagaattacactgaattatgtgatttttttcaaatttttagcggtgtcggcgtgt 22234957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 157
Target Start/End: Complemental strand, 37203315 - 37203272
Alignment:
Q  114 acacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||| ||||||| |||||||| |||||||||||||||||    
T  37203315 acacttgtaattacactaaattatgtcattttttcaaattatta 37203272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 157
Target Start/End: Original strand, 14465088 - 14465126
Alignment:
Q  119 tgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  14465088 tgtaattacattgaattatgtgattttttcaaattatta 14465126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 209
Target Start/End: Original strand, 482306 - 482335
Alignment:
Q  180 gtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    ||||||||||||||||||||||||||||||    
T  482306 gtgtcgtgtccggtgtccgtatccgtgctt 482335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 12708210 - 12708165
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgatttttt 147  Q
    ||||||||| ||||||||||| |||||||||||||| | |||||||    
T  12708210 gacacgacatcgacacttgtaattacactgaattatttcatttttt 12708165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 18844483 - 18844532
Alignment:
Q  116 acttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    |||| |||||||| ||| |||||||||||||||||||||||  |||||||    
T  18844483 acttttagttacattgagttatgtgattttttcaaattattttctgtgtc 18844532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 19312398 - 19312353
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgatttttt 147  Q
    ||||||||||||| |||| || ||||||||||| ||||||||||||    
T  19312398 gacacgacaccgatacttataattacactgaatcatgtgatttttt 19312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 31800477 - 31800538
Alignment:
Q  105 acgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||| ||||||||||||| ||||| | |||||| | ||||||| ||||||||| ||||||||    
T  31800477 acgataccgacacttgtaattacattaaattatttaattttttaaaattattagctgtgtcg 31800538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 40613504 - 40613443
Alignment:
Q  111 ccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||| | || |||||||||||||||||||||| ||||| ||||| | |||||| |||||    
T  40613504 ccgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgt 40613443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 4157495 - 4157455
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttt 146  Q
    ||||||||||||||||| || |||| |||||||||||||||    
T  4157495 cgacaccgacacttgtaattgcactaaattatgtgattttt 4157455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 12077869 - 12077821
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||| |||||||||||||||| ||||||||||||| || | |||||||    
T  12077869 ttacattgaattatgtgattttctcaaattattaacagtattgacgtgt 12077821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 20743296 - 20743344
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||||||| ||||| ||||||||||| | |||||| |||||    
T  20743296 ttacactgaattatgtcattttctcaaattattatccgtgtcggcgtgt 20743344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 157
Target Start/End: Original strand, 30522930 - 30522966
Alignment:
Q  121 tagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  30522930 tagttacactgaattatgtgattttctcaaataatta 30522966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 30838273 - 30838205
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgt 170  Q
    ||||||||||||| |||| || ||||||| |||||| | ||||| ||||||||||| | || |||||||    
T  30838273 gacacgacaccgatacttataattacactaaattatataattttatcaaattattagcagtatcgacgt 30838205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 34306804 - 34306863
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||||||||||| |||||||  ||||| ||| |||||||||||||||  |||||||    
T  34306804 cgacaccgacacttgtaattacactacattatctga-tttttcaaattattagttgtgtcg 34306863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 38148722 - 38148786
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcga 167  Q
    |||||||| ||||| ||  | |||||||||||||||||||||| ||||| ||||| | |||||||    
T  38148722 acacgacatcgacatttaaaattacactgaattatgtgattttctcaaactattagcggtgtcga 38148786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 96)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 6612167 - 6612271
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||| |||     
T  6612167 gacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtccggtgttcgtg 6612266  T
Q  201 tccgt 205  Q
    |||||    
T  6612267 tccgt 6612271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 1486705 - 1486809
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||  ||||| ||| |||||||||| |||||| |||||     
T  1486705 gacacgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccggtatccgtg 1486804  T
Q  201 tccgt 205  Q
    |||||    
T  1486805 tccgt 1486809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 24577181 - 24577284
Alignment:
Q  101 ggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgta 200  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||  ||||     |||||||||||| | |||||||||    
T  24577181 ggacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtg-----tccgtgtcgtgttcagtgtccgta 24577275  T
Q  201 tccgtgctt 209  Q
    |||||||||    
T  24577276 tccgtgctt 24577284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 38078661 - 38078766
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtc--gtgtccggtgtccgtatc 202  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||| ||| | ||||||  |||||| |||||||||||    
T  38078661 cgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtccggtgtcc-gtgtccgtatc 38078759  T
Q  203 cgtgctt 209  Q
    |||||||    
T  38078760 cgtgctt 38078766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 97 - 172
Target Start/End: Complemental strand, 113367 - 113292
Alignment:
Q  97 gacaggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||    
T  113367 gacacgacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 113292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 40917812 - 40917716
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||||| ||||||| ||||||| ||||  |||||||||||||||||||| |||||||| ||||| ||| |||||||||||||||||||||||    
T  40917812 gacacgacaccgagacttgtaattacacttaatt--gtgattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtccgt 40917716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 31694706 - 31694810
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtga--ttttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||||||||||||| ||| ||||||||||||||  |||||||||||||||| || ||||||||| | |||  | |||||||||||||||||||    
T  31694706 gacacgacaccgacacttgtaattatactgaattatgtgattttttttcaaattattagctatgtcgacgtatcagtgtc-tgtcgtgtccggtgtccgt 31694804  T
Q  200 atccgt 205  Q
    ||||||    
T  31694805 atccgt 31694810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 5376448 - 5376587
Alignment:
Q  61 tatgaagcacaaacactcctcagattag------gcatgtccgacag-gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaatt 153  Q
    ||||||||||| ||||||||| ||||||      || |||||||||  |||||||||||||||||| || |||||||||||||||| ||||| | |||||    
T  5376448 tatgaagcacagacactcctcggattagatgtgtgcgtgtccgacatcgacacgacaccgacacttttaattacactgaattatgttattttcttaaatt 5376547  T
Q  154 attaactgtgtcgacgtgttagt-tccgtgtcgtgtccgg 192  Q
    |||| | |||||| ||||||||| ||||||||||||||||    
T  5376548 attagcggtgtcggcgtgttagtgtccgtgtcgtgtccgg 5376587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 5927340 - 5927444
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    |||||| |||||||||| ||||| | |||||| ||||||||||||||||||| | ||||   ||||| ||| ||||||||||||||||||||||||||||    
T  5927340 cgacactgacacttgtaattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccg 5927439  T
Q  205 tgctt 209  Q
    |||||    
T  5927440 tgctt 5927444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 103 - 210
Target Start/End: Complemental strand, 15323225 - 15323117
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtat 201  Q
    |||||| || |||||||  | ||||||| ||||||||||||||||||||||||||||||| ||||| ||| ||| ||| ||||||||||||||||||| |    
T  15323225 acacgatacagacacttacaattacactaaattatgtgattttttcaaattattaactgtatcgacatgtcagtgtccatgtcgtgtccggtgtccgtgt 15323126  T
Q  202 ccgtgcttt 210  Q
    || ||||||    
T  15323125 ccatgcttt 15323117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 124 - 198
Target Start/End: Original strand, 398783 - 398858
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccg 198  Q
    |||||||||||||||||||||||||||||||||| | |||||| ||||| ||| ||||||||||||||||||||||    
T  398783 ttacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccg 398858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 40258934 - 40258993
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  40258934 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattaattgtgtcg 40258993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 203
Target Start/End: Original strand, 48040465 - 48040560
Alignment:
Q  110 accgacacttgtagttacactgaattatgtgat-tttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatcc 203  Q
    ||||||||||||| ||||||| || |||||||  ||||||||||||||| |||||||| ||||| ||| |||||||||||||||||||||||||||    
T  48040465 accgacacttgtatttacactaaaatatgtgacctttttcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatcc 48040560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 47989560 - 47989463
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||| | ||||||| ||||| ||| || |||||||||| ||| |||||    
T  47989560 gacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattatt-attgtgtcggcgtgtcagtgtctgtgtcgtgtctggtatccgt 47989463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 106 - 199
Target Start/End: Original strand, 22881616 - 22881704
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||||||| ||||     || ||||||||||||||||||||    
T  22881616 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtg-----tcagtgtcgtgtccggtgtccgt 22881704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 1704988 - 1705052
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||  |||||||    
T  1704988 gacacgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcg 1705052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 106 - 205
Target Start/End: Original strand, 42359449 - 42359549
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||  ||||||  ||||| ||| ||||||| |||| |||||| ||| ||||    
T  42359449 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgtgttgtgtacggtgttcgtgtccg 42359548  T
Q  205 t 205  Q
    |    
T  42359549 t 42359549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 5944346 - 5944248
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgatt--ttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtcc 197  Q
    |||||||||||||||||| || ||||||||||||||||||||  |||||||||||||| ||||| || ||||| ||| || |||||||||||| |||||    
T  5944346 gacacgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgtccgatgtcc 5944248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 22515887 - 22515946
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||    
T  22515887 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 22515946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 111 - 209
Target Start/End: Complemental strand, 31015097 - 31014998
Alignment:
Q  111 ccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||| |||||| | || || |||  |||||||||| |||||||| || |||||||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcgtgcccggtgtctgtgtccgtgctt 31014998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 46348383 - 46348462
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtc 184  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||||||||| |||||||| ||||| ||| ||||||||    
T  46348383 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 46348462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 9103698 - 9103633
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||| |||||    
T  9103698 cgacaccgacacttgta-ttaaactaaattatgtgattttttcaaattattaactgtgtcggcgtgt 9103633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 156
Target Start/End: Complemental strand, 18337388 - 18337338
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatt 156  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18337388 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 48450592 - 48450673
Alignment:
Q  111 ccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccg 191  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||| |||||| | ||||| ||| |||||||||||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccg 48450673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 103 - 206
Target Start/End: Original strand, 10572586 - 10572690
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtat 201  Q
    |||| |||||||||| | || |||||| ||||||||||||||| |||||||||||   |||||| ||||| ||| | | |||||||||||||||||||||    
T  10572586 acacaacaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtat 10572685  T
Q  202 ccgtg 206  Q
    |||||    
T  10572686 ccgtg 10572690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 20157345 - 20157441
Alignment:
Q  101 ggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtc 196  Q
    ||||||||||||||||| | |  |||||||||||||||||||||| ||| ||||||| | ||||||| |||| |||  |||||||||||||||||||    
T  20157345 ggacacgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccggtgtc 20157441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 31672895 - 31672955
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  31672895 cgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcg 31672955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 61 - 209
Target Start/End: Original strand, 35702543 - 35702686
Alignment:
Q  61 tatgaagcacaaacactcctcagattaggcatgtccgacaggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaact 160  Q
    ||||||||||  ||||||||| |||||||| ||||| |  |    |||||| |||||||||| ||||||| |||||| |||  |||||||||||||| ||    
T  35702543 tatgaagcacggacactcctcggattaggcgtgtcccatcgtgtccgacactgacacttgtaattacacttaattatttgaagttttcaaattattagct 35702642  T
Q  161 gtgtcgacgtgttagttccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    |||||| | ||     || ||||||||||||||||||||||||||||||    
T  35702643 gtgtcggcatg-----tcagtgtcgtgtccggtgtccgtatccgtgctt 35702686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 1864882 - 1864940
Alignment:
Q  108 acaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||| | || |||||||||||||||||||||| ||||||||||||||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcg 1864940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 19058856 - 19058922
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||||||||||| |||||||||||||||| || |||| ||||||||| |||||||| |||||    
T  19058856 cgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgt 19058922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 21378635 - 21378577
Alignment:
Q  108 acaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||||||||| |||||||||||||||| |||||||||| |||||| ||||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcg 21378577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 25272544 - 25272482
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    ||||||||||||||||| || ||||||| |||||||||||||| ||||||| |||||||||||    
T  25272544 acacgacaccgacacttataattacactaaattatgtgattttctcaaattgttaactgtgtc 25272482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 1815315 - 1815250
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| ||||  ||||||| |||||    
T  1815315 gacaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgt 1815250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 2896122 - 2896215
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||  | ||| ||||||||||||||||||||| ||||||||||| | |||||| ||||| ||| ||||||| ||||||| |||||||    
T  2896122 gacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccgttgtccgt 2896215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 17778609 - 17778549
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    ||||||||||||||||||||| ||||||||   ||||||||||||||||||||||| |||||||    
T  17778609 gacacgacaccgacacttgtaattacactg---tatgtgattttttcaaattattagctgtgtc 17778549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 51410084 - 51410023
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgatt-ttttcaaattattaactgtgtcg 166  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||  |||||||    
T  51410084 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagatgtgtcg 51410023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 16297295 - 16297375
Alignment:
Q  118 ttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtcc 197  Q
    ||||| |||||||||||| ||||||||||||| ||||||  |||||||||||||| ||| ||||| ||||||||| |||||    
T  16297295 ttgtaattacactgaattttgtgattttttcatattatttgctgtgtcgacgtgtcagtatccgtatcgtgtccgatgtcc 16297375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 38503383 - 38503279
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    |||| ||||||||||| | || |||||||||| ||| ||||||| ||||||||||| | ||||||  |||||||| |||||||| ||||| ||||||||     
T  38503383 gacaggacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtccgtg 38503284  T
Q  201 tccgt 205  Q
    |||||    
T  38503283 tccgt 38503279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 13011223 - 13011310
Alignment:
Q  114 acacttgtagttacactgaattatgtga-ttttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||| ||||||| |||||||||| |||||||||||||||| |||||||| | ||| ||| | |||||||||| ||||||||||    
T  13011223 acacttgtaattacacttaattatgtgatttttttcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgttcggtgtccgt 13011310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 6332732 - 6332679
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  6332732 acacgacaccgatacttgtaattacactgaattatgtgat-ttttcaaattatta 6332679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 9629896 - 9629966
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||||||||| || | |||||||||||| ||||||| ||||||||||| | ||||||| ||||    
T  9629896 gacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcgatgtgt 9629966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 107 - 157
Target Start/End: Original strand, 18190109 - 18190159
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||| ||||||||||| |||||||||||||||| |||||||||||||||||    
T  18190109 gacatcgacacttgtaattacactgaattatgtaattttttcaaattatta 18190159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 18471355 - 18471294
Alignment:
Q  110 accgacacttgtagttacactgaattatgtgatt--ttttcaaattattaactgtgtcgacg 169  Q
    ||||||||||||| ||| ||||||||||||||||  |||||||||||||| |||||||||||    
T  18471355 accgacacttgtaattatactgaattatgtgattttttttcaaattattagctgtgtcgacg 18471294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 107 - 157
Target Start/End: Original strand, 28273089 - 28273139
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||||||||| |||||||||||||| |||||||||||||| ||||    
T  28273089 gacaccgacacttgtaattacactgaattatatgattttttcaaatgatta 28273139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 37598890 - 37598825
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||||| || |||||||||||| |||||||||||||||||||||  ||||||| |||||    
T  37598890 cgacaccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgt 37598825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 18556454 - 18556535
Alignment:
Q  104 cacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtc 184  Q
    ||||||||| | ||||||| ||||| | ||||||||||| |||||||||||||| |||||||| ||||| ||| ||||||||    
T  18556454 cacgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 18556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 30173757 - 30173825
Alignment:
Q  101 ggacacgacaccgacacttgtagttacactgaattatgtgatttttt--caaattattaactgtgtcga 167  Q
    |||||||||||||||||||||| ||||||||| |||||| |||||||   ||||||||||| |||||||    
T  30173757 ggacacgacaccgacacttgtaattacactgagttatgtaatttttttcaaaattattaacagtgtcga 30173825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 36878519 - 36878454
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||||| | || |||||||||||||||||||||| ||||||||||| | |||||| |||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgt 36878454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 44482293 - 44482240
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattat 155  Q
    |||||||||||||||| | || |||||||||||||||||||||| |||||||||    
T  44482293 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 2218346 - 2218264
Alignment:
Q  61 tatgaagcacaaacactcctcagattaggcatgtccgacag---gacacgacaccgacacttgtagttacactgaattatgtg 140  Q
    ||||||||||  |||||||||||||||||| ||||| |  |   ||||||||||||||||||||| ||||||| |||||||||    
T  2218346 tatgaagcacggacactcctcagattaggcgtgtcctagtgtcggacacgacaccgacacttgtaattacactaaattatgtg 2218264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 6427526 - 6427482
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgatttttt 147  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||    
T  6427526 acacgacactgacacttgtagttacattgaattatgtgatttttt 6427482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 9828108 - 9828052
Alignment:
Q  101 ggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||||||| |  | |||||||||||||||||||||| |||||||||||    
T  9828108 ggacacgacaccgacacataaaattacactgaattatgtgattttatcaaattatta 9828052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 12443478 - 12443526
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  12443478 ttacactgaattatgtgattttctcaaattattagctgtgtcggcgtgt 12443526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 13997940 - 13997876
Alignment:
Q  108 acaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||| | || |||||||||||||||||||||||| |||| |||||| |||||| |||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgt 13997876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 17754374 - 17754310
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||| |||| ||||| | ||||||||||||||||||| ||||||||||||||||| | ||||||    
T  17754374 gacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcg 17754310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 39130767 - 39130871
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    |||||||||||| | || ||||||| |||||| | ||||| | ||||||||||  |||||  ||||| | | ||| ||||||||||||||||||||||||    
T  39130767 cgacaccgacacatataattacactaaattatataattttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtccggtgtccgtatccg 39130866  T
Q  205 tgctt 209  Q
    |||||    
T  39130867 tgctt 39130871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 41877470 - 41877530
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||||||||||| ||||||| |||||||| ||||| ||||||||||| | ||||||    
T  41877470 cgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcg 41877530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 1262919 - 1262848
Alignment:
Q  130 tgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    |||||||||||||||| ||||||||||| |||||||| |||||  || | ||||||||||||||| ||||||    
T  1262919 tgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccggtatccgta 1262848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 7918207 - 7918262
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||| ||||| | || |||||||||||||||||||||| |||||||||||    
T  7918207 gacacgacactgacacatataattacactgaattatgtgattttctcaaattatta 7918262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 14359529 - 14359587
Alignment:
Q  113 gacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||| |||||||| |||||    
T  14359529 gacacttgtaattacactaaattatgtga-tttttcaaattattagctgtgtcggcgtgt 14359587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 23653041 - 23652982
Alignment:
Q  123 gttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtg 182  Q
    ||||||||||| ||||||||||||||||||||||| || |||||  ||||| ||||||||    
T  23653041 gttacactgaagtatgtgattttttcaaattattagctttgtcggtgtgttcgttccgtg 23652982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 166
Target Start/End: Complemental strand, 23738716 - 23738677
Alignment:
Q  127 cactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  23738716 cactgaattatgtgattttttcaaattattagctgtgtcg 23738677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 155
Target Start/End: Complemental strand, 30359441 - 30359398
Alignment:
Q  112 cgacacttgtagttacactgaattatgtgattttttcaaattat 155  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||    
T  30359441 cgacacttgcagttacactaaattatgtgattttttcaaattat 30359398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 52903308 - 52903229
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtc 184  Q
    |||||||||||| | || |||||||||||||| ||||||| | ||||||||||| || ||| ||||||||| ||||||||    
T  52903308 cgacaccgacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgttagtgtccgtgtc 52903229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 6427413 - 6427323
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccg 191  Q
    ||||||||||| |||| | || ||||| |||||||||||||||| ||||||||||| | |||| | ||||| ||| |||||| ||||||||    
T  6427413 gacacgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccg 6427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 32434718 - 32434776
Alignment:
Q  108 acaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||| |||||||||| ||||| |||||||||||| |||||||||||||||  |||||||    
T  32434718 acacagacacttgtaattacaatgaattatgtgactttttcaaattattagttgtgtcg 32434776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 3490396 - 3490484
Alignment:
Q  112 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgtatccgt 205  Q
    ||||||||||| ||||||||||| ||||  |||| ||||||||||| | |||||| ||||     || ||||||||||||||||| ||||||||    
T  3490396 cgacacttgtaattacactgaataatgtagttttctcaaattattagcagtgtcggcgtg-----tcagtgtcgtgtccggtgtctgtatccgt 3490484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 16927203 - 16927268
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgt 188  Q
    |||||||||||||| ||||||||||||||||||| || || |||||||| ||| || |||||||||    
T  16927203 ttacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtcgtgt 16927268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 25361949 - 25361896
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattat 155  Q
    |||||||||| ||||| | || |||||||||||||||||||||| |||||||||    
T  25361949 gacacgacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 30749899 - 30749797
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaatta-ttaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgtatccg 204  Q
    |||||||||||| | || |||||||||||||||||||||| | |||  | |||  |||||||||| | |   |||||||||||||||||||||||||||     
T  30749899 cgacaccgacacatataattacactgaattatgtgattttctaaaaaaaattagatgtgtcgacgcggtg--tccgtgtcgtgtccggtgtccgtatcca 30749802  T
Q  205 tgctt 209  Q
    |||||    
T  30749801 tgctt 30749797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 30771350 - 30771248
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaatta-ttaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgtatccg 204  Q
    |||||||||||| | || |||||||||||||||||||||| | |||  | |||  |||||||||| | |   |||||||||||||||||||||||||||     
T  30771350 cgacaccgacacatataattacactgaattatgtgattttctaaaaaaaattagatgtgtcgacgcggtg--tccgtgtcgtgtccggtgtccgtatcca 30771253  T
Q  205 tgctt 209  Q
    |||||    
T  30771252 tgctt 30771248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 32461465 - 32461514
Alignment:
Q  108 acaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||| ||||||||| ||||| | ||||||||||||||||||||||||||    
T  32461465 acaccaacacttgtaattacattaaattatgtgattttttcaaattatta 32461514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 35919272 - 35919317
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgatttttt 147  Q
    |||||||||| ||||||| || ||||||||||||||||||||||||    
T  35919272 gacacgacacggacacttataattacactgaattatgtgatttttt 35919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 34257928 - 34257976
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||| |||||||||||||| | ||||||||||| ||||||||||||    
T  34257928 ttacactaaattatgtgattttattaaattattaacggtgtcgacgtgt 34257976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 195
Target Start/End: Complemental strand, 34298477 - 34298405
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttag-ttccgtgtcgtgtccggtgt 195  Q
    |||||||||||||||||||||| |||||||||||   ||||||  |||| || |||||||||||||| |||||    
T  34298477 ttacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtctggtgt 34298405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 5898267 - 5898326
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||| | | || |||||||||||||||||||||||||| ||||||| | ||||||    
T  5898267 gacaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgtcg 5898326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 10577740 - 10577835
Alignment:
Q  111 ccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgt 205  Q
    ||||||| | || |||||||| ||| ||||||||| | |||  |||| |||||||| |||||  || ||||||||||||||||||||||| |||||    
T  10577740 ccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgtccggtgtccgtgtccgt 10577835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 15641045 - 15641124
Alignment:
Q  121 tagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||||||||| |||||||||| | ||||||||| | |||||| | ||| ||| |||||||| |||||| |||||||    
T  15641045 tagttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtccgatgtccgt 15641124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 19324603 - 19324528
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttcc-gtgtcgtgtccggtgtccg 198  Q
    |||||||||||||||||||||| ||||||||| | | |||||||||| | ||| || |||  ||||||||||||||    
T  19324603 ttacactgaattatgtgattttctcaaattatcagcagtgtcgacgtatcagtgcctgtgctgtgtccggtgtccg 19324528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 209
Target Start/End: Original strand, 19562622 - 19562724
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgt 205  Q
    |||||| |||| | || |||||||||| |||| |||||| ||||||||||| | |||||| ||||| ||| | ||||| |||||||||||| |||||| |    
T  19562622 gacacctacacatataattacactgaactatgagattttctcaaattattagcagtgtcggcgtgtcagtgttcgtgt-gtgtccggtgtctgtatccat 19562720  T
Q  206 gctt 209  Q
    ||||    
T  19562721 gctt 19562724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 34371775 - 34371728
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaa 150  Q
    ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  34371775 acacgacaccgacacatataattacactgaattatgtgattttctcaa 34371728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 40181930 - 40181879
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||| || | || |||||||||||||||||||||| |||||||||||    
T  40181930 cgacaccgatacatataattacactgaattatgtgattttctcaaattatta 40181879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 2283726 - 2283676
Alignment:
Q  105 acgacaccgacacttgtagttacactgaattatgtgattttttcaaattat 155  Q
    |||||||| |||||| || ||||| ||||| ||||||||||||||||||||    
T  2283726 acgacaccaacacttataattacattgaatcatgtgattttttcaaattat 2283676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 158
Target Start/End: Original strand, 9449030 - 9449060
Alignment:
Q  128 actgaattatgtgattttttcaaattattaa 158  Q
    |||||||||||||||||||||||||||||||    
T  9449030 actgaattatgtgattttttcaaattattaa 9449060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 21530748 - 21530682
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||||| || ||| ||  |||||| ||||||| ||||||||||||| |||||| |||||    
T  21530748 cgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgt 21530682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 157
Target Start/End: Original strand, 27471567 - 27471617
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||| |||| |||| ||||||||||||||||| |||| |||||||||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattatta 27471617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 147
Target Start/End: Complemental strand, 28663668 - 28663626
Alignment:
Q  105 acgacaccgacacttgtagttacactgaattatgtgatttttt 147  Q
    |||||||||||||||||| |||||  |||||||||||||||||    
T  28663668 acgacaccgacacttgtaattacatagaattatgtgatttttt 28663626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 12612007 - 12611966
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtc 165  Q
    ||||||| ||||||||||||||||||||||| |||| |||||    
T  12612007 ttacactcaattatgtgattttttcaaattactaacagtgtc 12611966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 15449231 - 15449272
Alignment:
Q  105 acgacaccgacacttgtagttacactgaattatgtgattttt 146  Q
    ||||||| |||||||||| ||||||| |||||||||||||||    
T  15449231 acgacacagacacttgtaattacactaaattatgtgattttt 15449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 21621014 - 21620973
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgatttttt 147  Q
    |||||||||| ||||||  |||||||||||||||||||||||    
T  21621014 cgacaccgacgcttgtaaatacactgaattatgtgatttttt 21620973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 24334705 - 24334766
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatg-tgattttttcaaattattaactgtgtcg 166  Q
    ||||||||||||||||| |||||||||||||||    ||||||||||| |||| ||||||||    
T  24334705 cgacaccgacacttgtaattacactgaattatgcattttttttcaaatgattagctgtgtcg 24334766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 29144365 - 29144418
Alignment:
Q  113 gacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    |||||||||| |||||||| ||||| |  |||||||||||||||| ||||||||    
T  29144365 gacacttgtaattacactgcattatctatttttttcaaattattagctgtgtcg 29144418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 9709879 - 9709795
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtc 189  Q
    |||||||||||| | || |||||  ||||||||||||||| ||||||||||| | |||| | | ||| ||| |||||||||||||    
T  9709879 cgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtc 9709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 17831549 - 17831597
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||||| |||||||||| ||||||||||| | |||||| |||||    
T  17831549 ttacactgaataatgtgattttctcaaattattagcggtgtcggcgtgt 17831597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 22794096 - 22794144
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||| ||||||| ||||||||||||||||| | |||| |||||||    
T  22794096 ttacactgtattatgtcattttttcaaattattatccgtgttgacgtgt 22794144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 48547939 - 48548019
Alignment:
Q  61 tatgaagcacaaacactcctcagattaggcatgtccgacag-gacacgacaccgacacttgtagttacactgaattatgtg 140  Q
    ||||||||||  |||||||||  ||||||| | |||||||  ||||||||||| | ||||||| ||||| |||||||||||    
T  48547939 tatgaagcacggacactcctcgaattaggcgtatccgacaccgacacgacaccaatacttgtaattacattgaattatgtg 48548019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 205
Target Start/End: Complemental strand, 130538 - 130441
Alignment:
Q  109 caccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgt 205  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| | ||| | | ||||||||||||||||||||||| |||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgtccgtgtccgt 130441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 106 - 205
Target Start/End: Complemental strand, 8857 - 8757
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    ||||||||||||||||| ||||||| ||| || ||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||||||||||| ||||    
T  8857 cgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtccg 8758  T
Q  205 t 205  Q
    |    
T  8757 t 8757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 102 - 209
Target Start/End: Original strand, 178814 - 178923
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatg-tgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||| ||||| |||||||||| ||||||||||||||| |||||||||||||||||||  ||||||| ||||| ||| ||||||||||||||||||||  |    
T  178814 gacatgacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcaat 178913  T
Q  200 atccgtgctt 209  Q
    ||||||||||    
T  178914 atccgtgctt 178923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 192256 - 192346
Alignment:
Q  113 gacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatcc 203  Q
    |||||||||| |||||| ||||||||| ||||| ||||||||||||| |||||| ||||| ||| ||||| |||||| | ||||||||||||    
T  192256 gacacttgtaattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccgtatcgtgt-ctgtgtccgtatcc 192346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 241656 - 241559
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    ||||||||||||||||  || ||||||| ||||||||||||||| |||||||||| |||||||| ||||| ||| |||||||||||||||||||||||    
T  241656 acacgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 241559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 13459 - 13355
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    |||||||||| |||||| || ||||||||||||||||||| |||||||||||  ||||||| ||||| ||| |||||||| | |||||||||||||||||    
T  13459 cgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccg 13360  T
Q  205 tgctt 209  Q
    |||||    
T  13359 tgctt 13355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 102 - 209
Target Start/End: Complemental strand, 23483 - 23376
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    |||||||||||||||||| || ||||||||||||||||||||||||  | |||||| |||||||| ||||| ||| || ||||||||||| |||||||||    
T  23483 gacacgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtcgtgtcc-gtgtccgta 23385  T
Q  201 tccgtgctt 209  Q
    |||||||||    
T  23384 tccgtgctt 23376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 23571 - 23509
Alignment:
Q  105 acgacaccgacacttgtagttacactgaattatgtgatt-ttttcaaattattaactgtgtcg 166  Q
    ||||||| ||||||| || |||||||||||||||||||| |||| || |||||||||||||||    
T  23571 acgacactgacacttataattacactgaattatgtgattttttttaagttattaactgtgtcg 23509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 21868 - 21972
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    |||||||||| |||||| || ||||||||||||||||||| |||||||||||  ||||||| ||||| ||| |||||||| | |||||||||||||||||    
T  21868 cgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccg 21967  T
Q  205 tgctt 209  Q
    |||||    
T  21968 tgctt 21972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 106 - 205
Target Start/End: Original strand, 462 - 562
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||| | |||||| ||| | ||| |||||| ||||| |||||||||| ||||    
T  462 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgtgtccg 561  T
Q  205 t 205  Q
    |    
T  562 t 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 70337 - 70275
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgac 168  Q
    |||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||    
T  70337 cgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtcgac 70275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 23832 - 23771
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgatt-ttttcaaattattaactgtg 163  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  23832 acacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattaactgtg 23771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 61 - 209
Target Start/End: Original strand, 135264 - 135416
Alignment:
Q  61 tatgaagcacaaacactcctcagattaggcatgtcc----gacaggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatt 156  Q
    |||||||||| ||||| ||||||||||||| |||||    | | ||||||||||||||||| | || |||||| ||||||||||||||| ||||||||||    
T  135264 tatgaagcacgaacacgcctcagattaggcgtgtcctggtgtc-ggacacgacaccgacacatataattacacagaattatgtgattttctcaaattatt 135362  T
Q  157 aactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    | | ||||||  ||||| || || ||||||| | |||||||||||||| |||||    
T  135363 agcagtgtcggtgtgttggtgtctgtgtcgtattcggtgtccgtatccatgctt 135416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 3846 - 3909
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  3846 acacgacactgacacttgtaattacactgaattatgtgatttttttaaattattaaccgtgtcg 3909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 114 - 184
Target Start/End: Complemental strand, 51862 - 51791
Alignment:
Q  114 acacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtc 184  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 51791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 209
Target Start/End: Complemental strand, 71788 - 71684
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgatt--ttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgt 199  Q
    |||||||||| |||||| ||| |||||||||||| |||||||  |||||||||||||| |||||||| ||||     || |||||||||||| |||||||    
T  71788 gacacgacactgacactagtaattacactgaattgtgtgattttttttcaaattattagctgtgtcggcgtg-----tcagtgtcgtgtccgatgtccgt 71694  T
Q  200 atccgtgctt 209  Q
    ||||||||||    
T  71693 atccgtgctt 71684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 208
Target Start/End: Complemental strand, 53256 - 53140
Alignment:
Q  90 catgtccgacag-gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgt 188  Q
    |||||||||||  |||||| ||||||||||| || |||||||||||||||||||||| ||||||||||  | || ||| ||||| ||   ||||||||||    
T  53256 catgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattattggcggtatcggcgtgtcag---cgtgtcgtgt 53160  T
Q  189 ccggtgtccgtatccgtgct 208  Q
    ||||||| ||| ||||||||    
T  53159 ccggtgttcgtgtccgtgct 53140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 263368 - 263472
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgta 200  Q
    |||||||||| ||||||| || ||||||||||||||||| |||| ||||||||||| | |||| ||| ||| ||| |||||||||| ||| ||||||||     
T  263368 gacacgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgtatccagtgtccgtg 263467  T
Q  201 tccgt 205  Q
    |||||    
T  263468 tccgt 263472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 199
Target Start/End: Original strand, 225274 - 225362
Alignment:
Q  112 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||| || ||||| || ||||||| ||||| ||||||||||| |||||||| ||||| ||| |||||||||||||||||||||||    
T  225274 cgacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 225362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 17750 - 17817
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtta 174  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||||||  |||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcagcgtgtta 17817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 8729 - 8631
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
    |||||||||||||||||| || ||| |||||| |||||||||||   |||||||||   |||||||||||| ||| ||| |||||||||||||||||||    
T  8729 gacacgacaccgacacttataattatactgaactatgtgattttcctaaattattagaagtgtcgacgtgtcagtgtccatgtcgtgtccggtgtccgt 8631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 8068 - 8003
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||||| || |||||||| ||||| |||||||||||||||||||  ||||||| |||||    
T  8068 cgacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtgtcggcgtgt 8003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 14580 - 14523
Alignment:
Q  115 cacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||| ||||||||||||||||||||||||||||||||||  ||||||| |||||    
T  14580 cacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgt 14523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 25765 - 25834
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    ||||||||||||||||| || ||||||| |||||||||||||| || |||||||||| ||||| ||||||    
T  25765 acacgacaccgacacttataattacactaaattatgtgattttctctaattattaaccgtgtcaacgtgt 25834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 118 - 209
Target Start/End: Original strand, 33375 - 33459
Alignment:
Q  118 ttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagttccgtgtcgtgtccggtgtccgtatccgtgctt 209  Q
    ||||| |||||||||||||||| ||||||||||||||||| |||||||| |||||        ||||||||||||||||| |||||||||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtgtcggcgtgt-------ctgtcgtgtccggtgtccttatccgtgctt 33459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 107 - 209
Target Start/End: Original strand, 4884 - 4987
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtga-ttttttcaaattattaactgtgtcgacgtgttag-ttccgtgtcgtgtccggtgtccgtatccg 204  Q
    |||||| ||||||||| |||||||||||||||||| |||||| ||||||||| ||||||||  |||||||  |  ||||||||||| ||||| |||||||    
T  4884 gacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgttagagtatgtgtcgtgtcc-gtgtctgtatccg 4982  T
Q  205 tgctt 209  Q
    |||||    
T  4983 tgctt 4987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 7032 - 7096
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgt 170  Q
    ||||||| ||||||||| ||| ||| |||||||| ||||||||||||||||| ||||||||||||    
T  7032 cgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcgacgt 7096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 1098 - 1034
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||| |||| ||||| | ||||||||||||||||||| ||||||||||||||||| | ||||||    
T  1098 gacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcg 1034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 8631 - 8695
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 166  Q
    ||||||||||||||| ||||| ||| || |||||||||||| ||||||||||||||  |||||||    
T  8631 gacacgacaccgacatttgtaattataccgaattatgtgatattttcaaattattagttgtgtcg 8695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 199
Target Start/End: Complemental strand, 21148 - 21008
Alignment:
Q  61 tatgaagcacaaacactcctcagattaggcatgtccgacag-gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaac 159  Q
    ||||||||||  | ||| ||| |||||||| |||| ||||  ||||||| |||||||| | || ||| || || |||||||||||| |||||||||||||    
T  21148 tatgaagcacggatacttctcggattaggcgtgtctgacaccgacacgataccgacacatataattataccgacttatgtgattttctcaaattattaac 21049  T
Q  160 tgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgt 199  Q
     |||||  | ||| ||| ||||||||||||| |||||||||    
T  21048 cgtgtcagcatgtcagtgtccgtgtcgtgtctggtgtccgt 21008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 19207 - 19125
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtc 184  Q
    ||||||||||||||| || || | |||||||||||||| ||||||| |||||||||||  ||||| ||||||||| ||||||||    
T  19207 gacacgacaccgacatttttaatcacactgaattatgtcatttttt-aaattattaaccatgtcggcgtgttagtgtccgtgtc 19125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 191
Target Start/End: Original strand, 45530 - 45617
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgt-gattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccg 191  Q
    ||||||||||||||||| ||||||||||||||||   |||||| | || ||||| ||||||||||||| ||| ||||||| |||||||    
T  45530 cgacaccgacacttgtaattacactgaattatgtatttttttttagataattaattgtgtcgacgtgtcagtgtccgtgttgtgtccg 45617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000004; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 92859 - 92800
Alignment:
Q  113 gacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||| | |||||| |||||    
T  92859 gacacttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgt 92800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 123686 - 123626
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtga---ttttttcaaattattaactgtgt 164  Q
    |||||||||||||||| ||||||||||||||||||   |||||| ||||||||| ||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgattctttttttaaattattagctgtgt 123626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 83220 - 83172
Alignment:
Q  105 acgacaccgacacttgtagttacactgaattatgtgattttttcaaatt 153  Q
    |||||||||||| ||||| |||||||||||||||| ||||||| |||||    
T  83220 acgacaccgacatttgtaattacactgaattatgtcatttttttaaatt 83172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 191
Target Start/End: Complemental strand, 19626 - 19549
Alignment:
Q  114 acacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccg 191  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||  ||| ||| ||||| ||| || ||||||||||||    
T  19626 acacttgtaattacactgaattatgtgat-ttttcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtccg 19549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 28913 - 28839
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt 176  Q
    ||||| |||||||||| | || ||||| ||||||||| |||||| | ||||||||||| |||||| |||||||||    
T  28913 gacacaacaccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtcggcgtgttagt 28839  T

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Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 63831 - 63781
Alignment:
Q  107 gacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    |||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  63831 gacaccgacacttgtaattgcactgaattatgtaattttctcaaattatta 63781  T

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Target: scaffold0049; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 57053 - 57024
Alignment:
Q  60 gtatgaagcacaaacactcctcagattagg 89  Q
    ||||||||||||||||||||||||||||||    
T  57053 gtatgaagcacaaacactcctcagattagg 57024  T

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Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 9744 - 9798
Alignment:
Q  103 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 157  Q
    ||||||||||||||| | || ||||||||||||| |||||||| |||||||||||    
T  9744 acacgacaccgacacatataattacactgaattaagtgattttctcaaattatta 9798  T

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Target: scaffold0123 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 44521 - 44572
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaatt 153  Q
    ||||||| |||||||| | || |||||||||||||||||||||| |||||||    
T  44521 gacacgataccgacacatataattacactgaattatgtgattttctcaaatt 44572  T

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Target: scaffold0697 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 1703 - 1637
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||||| || ||| ||  |||||| ||||||| ||||||||||||| |||||| |||||    
T  1703 cgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgt 1637  T

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Target: scaffold0227 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 7319 - 7377
Alignment:
Q  114 acacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||| || ||||||| ||||||||||||||| ||||||||||  ||||||| |||||    
T  7319 acacttataattacactaaattatgtgatttttccaaattattagttgtgtcggcgtgt 7377  T

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Target: scaffold0051 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 45678 - 45608
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt 176  Q
    |||||||||||||| |||||||| |  ||||| | |||||||||||| ||   ||||||||||||||||||    
T  45678 cgacaccgacacttatagttacatttgattatttcattttttcaaatcatcgcctgtgtcgacgtgttagt 45608  T

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Target: scaffold0086 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 2991 - 2946
Alignment:
Q  102 gacacgacaccgacacttgtagttacactgaattatgtgatttttt 147  Q
    |||||||||| || ||||||| ||||||| ||||||||||||||||    
T  2991 gacacgacactgatacttgtaattacactaaattatgtgatttttt 2946  T

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Target: scaffold0598 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 8071 - 8119
Alignment:
Q  124 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 172  Q
    |||||||||||||||| ||||| ||||||||||| | || |||||||||    
T  8071 ttacactgaattatgtcattttctcaaattattatccgtatcgacgtgt 8119  T

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Target: scaffold0116 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 205
Target Start/End: Complemental strand, 9957 - 9857
Alignment:
Q  106 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgttagt-tccgtgtcgtgtccggtgtccgtatccg 204  Q
    |||||||||||| | || |||||||| ||| | ||||||| | |||  |||| |||||||| |||||  || ||| ||||||||||||||||||| ||||    
T  9957 cgacaccgacacatataattacactgcattttatgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccatgtcgtgtccggtgtccgtgtccg 9858  T
Q  205 t 205  Q
    |    
T  9857 t 9857  T

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