View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6355_high_41 (Length: 221)
Name: NF6355_high_41
Description: NF6355
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6355_high_41 |
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Alignment Details
Target: chr4 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 19 - 203
Target Start/End: Complemental strand, 33552522 - 33552338
Alignment:
| Q |
19 |
aatatcaattgaattataaatgaatcataaaaatcatcataattagaagccaacattattacacaaaagaccgccatatccatctcttgttttaacatat |
118 |
Q |
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| T |
33552522 |
aatatcaattgaattatgaatgaatcataaaaatcctcataattagaagccaacattattacacaaaagaccgccatatccatctcttgtttaaatatat |
33552423 |
T |
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| Q |
119 |
tatgtttcgatgacgtcaagcataccaaattgttgcaacaaagatgaaggaatgaaagcttttggttcaaacaataagagtaaat |
203 |
Q |
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| T |
33552422 |
tatgtcttgatgacgtcaagcccaccaaattgttgcaacaaagatgaaggaatgaaagcttttggttcaaacaataagagtaaat |
33552338 |
T |
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