View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6358_low_12 (Length: 253)
Name: NF6358_low_12
Description: NF6358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6358_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 46126696 - 46126919
Alignment:
| Q |
18 |
cataatgccaaatttttgggagcttttacccaaaatgttgggcatgcttcggctttggaagctgagttttgcgcgtgtctgcgggctattgagaaagcga |
117 |
Q |
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| T |
46126696 |
cataatgccaaatttttgggagcttttacccaaaatgttgggcatgcttcggctttggaagctgagttttgcgcgtgtctgcgggctattgagaaagcga |
46126795 |
T |
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| Q |
118 |
aagagcttcactttcctgacatcattgtggaaaactgactctttaggagtggttaatgcctctaaaaattctgcaagtgtctcttggagaatgtcagcta |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46126796 |
aagagcttcactttcctgacatcattgtggaaaactgactctttaggagtggttaatgcctctaaaaattctgcaagtgtctcttggagaatgtcagcta |
46126895 |
T |
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| Q |
218 |
gatggtacaattgtaagcaatatt |
241 |
Q |
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|||||||||||||||||||||||| |
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| T |
46126896 |
gatggtacaattgtaagcaatatt |
46126919 |
T |
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