View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6358_low_18 (Length: 241)
Name: NF6358_low_18
Description: NF6358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6358_low_18 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 982576 - 982802
Alignment:
| Q |
19 |
cacttcacataattaaaacttatttctccaaaacaattctattagaagataaaatagcaaacataaatgttgtctaatcacatgttatgattcataggaa |
118 |
Q |
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| T |
982576 |
cacttcacataattaaaacttatttctccaaaacaattatattagaagatgaaatagcaaacataaatgttgtctaatcacatgttatgattcataggaa |
982675 |
T |
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| Q |
119 |
tggattgtgtacaatgcatcatgcatgaatagaaacaac----tatatagaataaacagtaatgaatttagtagggttaatacatgtttacctgtcatca |
214 |
Q |
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| T |
982676 |
tggattgtgtacaatgcatcatgcatgaatagaaacaaccaagtatatagaacaaataataatgaatttagtagggttaatacatgtttacatgtcatca |
982775 |
T |
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| Q |
215 |
ttattctcttatcaatcaaatcaaacc |
241 |
Q |
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| T |
982776 |
ttattctcttatcaatcaaatcaaacc |
982802 |
T |
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