View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6360_high_34 (Length: 261)
Name: NF6360_high_34
Description: NF6360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6360_high_34 |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 41641359 - 41641585
Alignment:
| Q |
14 |
agacaagatacgcagtggatggactacgagcatgtgcatttctgtcccacaacatctttacattgaatcttgctactcactctctgctttaacttttacc |
113 |
Q |
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| T |
41641359 |
agacaagatacgcagtggatggactacgagcatgtgcatttctgtcccacaacatctttacattgaatcttgctactcactctctgctttaacttttacc |
41641458 |
T |
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| Q |
114 |
aatcgtgggtttactttatatatcatgttaaatctatctattgcataaaatatgtgtatagatttttggagaattatggtaaactccattgaggttatag |
213 |
Q |
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| T |
41641459 |
aatcgtgggtttactttatatatcatgttaa----atctattgcataaaatatgtgtatggatttttggagaattatggtaaactccattgaggttatag |
41641554 |
T |
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| Q |
214 |
agattctccacataattagtggaccatatat |
244 |
Q |
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| T |
41641555 |
agattctccacataattagtggaccatatat |
41641585 |
T |
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