View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6360_high_37 (Length: 247)
Name: NF6360_high_37
Description: NF6360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6360_high_37 |
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Alignment Details
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 51342453 - 51342679
Alignment:
| Q |
1 |
aaacagttagtctaacagaaagaaattttaatataatgttgcaagtgtcatactcgtatctgttttggaggagacttcccttccctaaaaaccttatgga |
100 |
Q |
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| T |
51342453 |
aaacagttagtctaacagaaataaattttaatataatgttgcaagtgtcatactcgtatctgttttggaggagacttcccttccctaaaaaccttatgga |
51342552 |
T |
|
| Q |
101 |
ttagagcataagctttgtctttaaattttaatgctaattttcaggtaagtctcgccatttttaaaaatataatggagccaaacatgcgagacatgcatga |
200 |
Q |
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| T |
51342553 |
ttagagcataagctttgtctttaaattttaatgctaattttcaggtaagtctcgcca-ttttaaaaatataatggagccaaacatgcgagacatgcatga |
51342651 |
T |
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| Q |
201 |
atttcactcgtaagaaatttatgttgct |
228 |
Q |
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||||||||||||||||||| |||||||| |
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| T |
51342652 |
atttcactcgtaagaaattgatgttgct |
51342679 |
T |
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