View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6360_high_43 (Length: 219)
Name: NF6360_high_43
Description: NF6360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6360_high_43 |
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Alignment Details
Target: chr7 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 41073129 - 41072923
Alignment:
| Q |
1 |
aaaaaagacaaggaaataatgatnnnnnnnnttggacaataacttatctcttattttaagagtgaaaaagaattttgggattaaaagctaatgtttcatt |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
41073129 |
aaaaaagacaaggaaataatgataaaaaaaattggacaataacttatctcttattttaagagtgagaaagaattttgggattaaaagctaatgtttcatt |
41073030 |
T |
|
| Q |
101 |
cagtactaactcatttgcctacttagaaggatacaaatactggcccatcaaatgttaatgccttatatgtgcaataagatggacaaggctggtggaaact |
200 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
41073029 |
cagtacttactcatttgcctacttagaaggatacaaatactggcccatcaaatgtaaatgcctcatatgtgcaataagatggacaaggctggtggaaact |
41072930 |
T |
|
| Q |
201 |
gcatatt |
207 |
Q |
| |
|
||||||| |
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| T |
41072929 |
gcatatt |
41072923 |
T |
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