View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6360_low_26 (Length: 302)
Name: NF6360_low_26
Description: NF6360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6360_low_26 |
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Alignment Details
Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 23 - 276
Target Start/End: Complemental strand, 36415684 - 36415442
Alignment:
| Q |
23 |
cgagccaaactcgattttatggctatggtgttgctggtttctcatgccacaataatacggcgatgctatgatgcagtggccacaattcaattcaattcaa |
122 |
Q |
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| T |
36415684 |
cgagccaaactcgattttatggctatggtgttgctggtttctcatgccacaataatacggcgatgctatgatgcagtggccacaattcaattcaattcaa |
36415585 |
T |
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| Q |
123 |
ttcaaattgtgacaacgtacatgttgctattagagtgctctgcgccaaaataataaaaagctgcaccatacgcatttaagagagtagaggttgaggttga |
222 |
Q |
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| T |
36415584 |
atc-----gtgacagcgtacatgttgctattagagtgctctgcgccaaaataataaaaagctgcaccatacgcatttaagagagtagaggttga------ |
36415496 |
T |
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| Q |
223 |
ggttttgttttgcattgtggtaacataatagcagcagctactcagtcgttagta |
276 |
Q |
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| T |
36415495 |
ggttttgttttgcattgtggtaacataatagcagcagctactcagtcgttagta |
36415442 |
T |
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