View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6360_low_37 (Length: 264)

Name: NF6360_low_37
Description: NF6360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6360_low_37
NF6360_low_37
[»] chr2 (15 HSPs)
chr2 (65-254)||(3586412-3586601)
chr2 (76-252)||(15825205-15825380)
chr2 (183-252)||(36267549-36267618)
chr2 (143-252)||(18772299-18772408)
chr2 (180-248)||(19919034-19919102)
chr2 (192-252)||(24499840-24499900)
chr2 (105-252)||(10923059-10923205)
chr2 (186-250)||(45258126-45258190)
chr2 (202-252)||(12169024-12169074)
chr2 (220-251)||(12127671-12127702)
chr2 (186-252)||(15390559-15390625)
chr2 (204-254)||(24755517-24755567)
chr2 (175-252)||(18135922-18135999)
chr2 (187-252)||(45715046-45715111)
chr2 (186-242)||(29711077-29711133)
[»] chr4 (8 HSPs)
chr4 (100-252)||(2674462-2674614)
chr4 (65-254)||(29157151-29157340)
chr4 (192-252)||(12683836-12683896)
chr4 (101-252)||(19643753-19643903)
chr4 (186-252)||(47253328-47253394)
chr4 (206-252)||(19809752-19809798)
chr4 (206-252)||(19818744-19818790)
chr4 (186-242)||(5518601-5518657)
[»] chr7 (14 HSPs)
chr7 (67-252)||(26762766-26762951)
chr7 (70-252)||(9135220-9135401)
chr7 (100-252)||(5863238-5863390)
chr7 (76-252)||(13291988-13292163)
chr7 (123-252)||(39879438-39879568)
chr7 (166-254)||(12644834-12644923)
chr7 (186-257)||(16204337-16204408)
chr7 (193-252)||(29373497-29373556)
chr7 (186-241)||(43172010-43172065)
chr7 (192-250)||(7486598-7486656)
chr7 (136-252)||(16987016-16987132)
chr7 (220-251)||(21161293-21161324)
chr7 (210-248)||(9867937-9867975)
chr7 (186-243)||(12265099-12265156)
[»] chr3 (15 HSPs)
chr3 (156-249)||(16704456-16704549)
chr3 (186-252)||(9801058-9801124)
chr3 (101-252)||(1770876-1771025)
chr3 (182-250)||(2311804-2311872)
chr3 (187-243)||(20622468-20622524)
chr3 (187-252)||(17143724-17143789)
chr3 (192-252)||(28715468-28715528)
chr3 (177-252)||(30606979-30607054)
chr3 (186-252)||(21342261-21342327)
chr3 (192-244)||(8122895-8122947)
chr3 (104-151)||(9800977-9801024)
chr3 (135-218)||(12108504-12108587)
chr3 (138-209)||(25496032-25496103)
chr3 (186-248)||(7835548-7835610)
chr3 (186-242)||(14860073-14860129)
[»] chr5 (12 HSPs)
chr5 (101-252)||(32418375-32418526)
chr5 (187-252)||(22903144-22903209)
chr5 (192-252)||(20025334-20025394)
chr5 (176-252)||(26994570-26994646)
chr5 (187-258)||(25333780-25333851)
chr5 (205-252)||(27083231-27083278)
chr5 (206-255)||(34493561-34493610)
chr5 (154-254)||(22865810-22865910)
chr5 (166-218)||(31202329-31202381)
chr5 (75-203)||(24546442-24546569)
chr5 (186-252)||(24647339-24647405)
chr5 (186-242)||(25537466-25537522)
[»] scaffold0291 (2 HSPs)
scaffold0291 (104-246)||(15323-15464)
scaffold0291 (206-252)||(8571-8617)
[»] chr6 (20 HSPs)
chr6 (104-240)||(11087565-11087701)
chr6 (101-254)||(33596910-33597063)
chr6 (105-248)||(31423731-31423873)
chr6 (90-252)||(18147357-18147519)
chr6 (66-251)||(689712-689896)
chr6 (192-252)||(19305515-19305575)
chr6 (123-254)||(15480252-15480383)
chr6 (186-257)||(20148361-20148432)
chr6 (186-257)||(22184396-22184467)
chr6 (108-252)||(17380148-17380292)
chr6 (105-252)||(22572095-22572242)
chr6 (205-252)||(3404855-3404902)
chr6 (186-245)||(16131026-16131085)
chr6 (202-249)||(30681046-30681093)
chr6 (166-252)||(19277030-19277116)
chr6 (205-254)||(34572987-34573036)
chr6 (205-248)||(12203631-12203674)
chr6 (82-252)||(34064246-34064415)
chr6 (220-252)||(14080534-14080566)
chr6 (220-252)||(14268482-14268514)
[»] chr1 (15 HSPs)
chr1 (65-254)||(22414824-22415013)
chr1 (186-252)||(12177437-12177503)
chr1 (106-252)||(16050445-16050591)
chr1 (195-257)||(23280245-23280307)
chr1 (186-252)||(26977791-26977857)
chr1 (211-252)||(16030446-16030487)
chr1 (192-245)||(52565638-52565691)
chr1 (166-252)||(23728774-23728860)
chr1 (202-252)||(34273138-34273188)
chr1 (182-250)||(2140918-2140986)
chr1 (220-252)||(5671821-5671853)
chr1 (75-127)||(14254906-14254958)
chr1 (205-252)||(5459702-5459749)
chr1 (224-254)||(33101519-33101549)
chr1 (192-252)||(25408147-25408207)
[»] chr8 (15 HSPs)
chr8 (117-252)||(21416789-21416924)
chr8 (128-258)||(26916814-26916944)
chr8 (186-250)||(18322996-18323060)
chr8 (105-252)||(30477692-30477839)
chr8 (164-245)||(17319586-17319665)
chr8 (104-252)||(5859866-5860014)
chr8 (192-252)||(6928070-6928130)
chr8 (176-252)||(24507508-24507584)
chr8 (186-252)||(3459458-3459524)
chr8 (201-252)||(17698274-17698325)
chr8 (204-252)||(13754809-13754857)
chr8 (186-243)||(23497137-23497194)
chr8 (220-248)||(7220617-7220645)
chr8 (204-252)||(13765040-13765088)
chr8 (220-252)||(24070903-24070935)
[»] scaffold0360 (1 HSPs)
scaffold0360 (186-252)||(13973-14039)
[»] scaffold0140 (1 HSPs)
scaffold0140 (176-252)||(6349-6425)
[»] scaffold0054 (1 HSPs)
scaffold0054 (186-257)||(68776-68847)
[»] scaffold0023 (1 HSPs)
scaffold0023 (107-252)||(95705-95850)
[»] scaffold0380 (1 HSPs)
scaffold0380 (136-252)||(6784-6900)
[»] scaffold0101 (1 HSPs)
scaffold0101 (186-245)||(10705-10764)
[»] scaffold0057 (1 HSPs)
scaffold0057 (166-252)||(73756-73842)
[»] scaffold0002 (2 HSPs)
scaffold0002 (75-252)||(379767-379943)
scaffold0002 (186-252)||(120985-121051)
[»] scaffold0074 (1 HSPs)
scaffold0074 (123-252)||(35304-35434)
[»] scaffold0505 (1 HSPs)
scaffold0505 (220-252)||(7936-7968)
[»] scaffold0174 (1 HSPs)
scaffold0174 (219-249)||(29285-29315)
[»] scaffold0205 (1 HSPs)
scaffold0205 (167-251)||(22938-23022)


Alignment Details
Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 65 - 254
Target Start/End: Complemental strand, 3586601 - 3586412
Alignment:
Q  65 agctcaagtacaccgcgccacacaggagcacaccttcgcgcgaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaa 164  Q
    ||||| |||| ||||| |||||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| |||||||||||||||||  |||| |  |||    
T  3586601 agctcgagtaaaccgcaccacacagaagcacacctccgcacgaggatcatcctacatgtgtcctctaaccgtccctattcacacgccgcataaccaagaa 3586502  T
Q  165 gcggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacacttt 254  Q
    |||||||| ||||||| ||| ||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||    
T  3586501 gcggttatgaccaacgcgcgcctatataagggtgaacttgcttcaccctcaaggtatgattcacttttcacaacactttctactcacttt 3586412  T

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Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 76 - 252
Target Start/End: Complemental strand, 15825380 - 15825205
Alignment:
Q  76 accgcgccacacaggagcacaccttcgcgcgaggatcaccctacatatgtcct-ctaactgtccctattcacacgccagataatccggaagcggttataa 174  Q
    |||| ||||||||||||||||||||||| | ||||||||||||||| |||||| ||  | |||| ||  ||||||||  ||||  || |  ||||||| |    
T  15825380 accgtgccacacaggagcacaccttcgcacaaggatcaccctacatgtgtcctact--ccgtccttaaacacacgccgcataactcgaagacggttatga 15825283  T
Q  175 ccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||| ||| |||||||||||||||||||||||| |||||||| |    | ||||||||||||||||||||||||||    
T  15825282 ccaacgcgcgcctatacaagggtgaacttgcttcaccctcaaggtacacatgacttttcacaacactttctacacact 15825205  T

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Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 36267618 - 36267549
Alignment:
Q  183 cgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||||| |||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  36267618 cgtctatataagggtgaacttgcttcaccctcaaggtatgattcacttttcacaaccctttctacacact 36267549  T

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Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 252
Target Start/End: Complemental strand, 18772408 - 18772299
Alignment:
Q  143 tcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactt 242  Q
    |||||||||  ||||||||||  | ||||| ||||||||| ||||||| |||||||||||||||||| ||||||||      ||||||||||||||||||    
T  18772408 tcacacgccgcataatccggagacagttatgaccaacgtgtgtctatataagggtgaacttgcttcaccctcaaggtgcacgtcacttttcacaacactt 18772309  T
Q  243 tctacacact 252  Q
    ||||||||||    
T  18772308 tctacacact 18772299  T

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Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 19919034 - 19919102
Alignment:
Q  180 gtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctaca 248  Q
    ||||| ||||| ||| ||||  ||||||||||||||||| |||||||||||||||||||||||||||||    
T  19919034 gtgcgcctatataagagtgatattgcttcatcctcaaggtatgattcacttttcacaacactttctaca 19919102  T

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Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 24499900 - 24499840
Alignment:
Q  192 aagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||||||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||    
T  24499900 aagggtgaacttgcttcacccttaaggtatgattcacttttcacaacattttctacacact 24499840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 252
Target Start/End: Original strand, 10923059 - 10923205
Alignment:
Q  105 cgaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaacttg 204  Q
    ||||||||||||||||  ||||||||  | ||| ||| |||||||||  |||| ||| |  | ||||| ||||||   ||| |||| |||||||||||||    
T  10923059 cgaggatcaccctacacgtgtcctcttcc-gtctctaatcacacgccgcataagccgaagactgttatgaccaacacacgtgtatataagggtgaacttg 10923157  T
Q  205 cttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||| ||||||||||   ||||||||||||| |||||||||||||||    
T  10923158 cttcaccctcaaggcacacttcacttttcacagcactttctacacact 10923205  T

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Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 45258126 - 45258190
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacaca 250  Q
    ||||| ||||||||  |||||||| |||||||| ||||||||||||||||||||||||| |||||    
T  45258126 ctatataagggtgactttgcttcaccctcaaggtatgattcacttttcacaacactttcgacaca 45258190  T

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Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 252
Target Start/End: Complemental strand, 12169074 - 12169024
Alignment:
Q  202 ttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  12169074 ttgcttcaccctcaaggtataattcacttttcacaacactttctacacact 12169024  T

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Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 251
Target Start/End: Original strand, 12127671 - 12127702
Alignment:
Q  220 atgattcacttttcacaacactttctacacac 251  Q
    ||||||||||||||||||||||||||||||||    
T  12127671 atgattcacttttcacaacactttctacacac 12127702  T

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Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 15390559 - 15390625
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||| |||||||||||||||||| |||||||| |    ||||||||||||||||||  ||||||||    
T  15390559 ctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcttacacact 15390625  T

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Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 24755567 - 24755517
Alignment:
Q  204 gcttcatcctcaaggcatgattcacttttcacaacactttctacacacttt 254  Q
    |||||||| | |||| | |||||||||||||||||| ||||||||||||||    
T  24755567 gcttcatcttaaaggtacgattcacttttcacaacaatttctacacacttt 24755517  T

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Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 252
Target Start/End: Complemental strand, 18135999 - 18135922
Alignment:
Q  175 ccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||||||| ||||| |||||||||||||||||| | || ||| ||   |||||||| |||||||||  ||||||||    
T  18135999 ccaacgtgcgcctatataagggtgaacttgcttcaccttctaggtatacatcacttttgacaacacttcttacacact 18135922  T

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Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 45715111 - 45715046
Alignment:
Q  187 tatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||||||||||  | |||||| | |||||| |||||||| ||||||| ||||||| ||||||||    
T  45715111 tatacaagggtgacttagcttcaccttcaaggtatgattcaattttcaccacactttttacacact 45715046  T

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Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 29711133 - 29711077
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactt 242  Q
    ||||| |||||||||||||||||| |||||||| |    ||||||||||||||||||    
T  29711133 ctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaacactt 29711077  T

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Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 252
Target Start/End: Original strand, 2674462 - 2674614
Alignment:
Q  100 tcgcgcgaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtga 199  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||||||  | ||||||||  |||||||   ||||| |||  |||| ||||||||    
T  2674462 tcgcgcgaggatcaccctacacgtgtcctctaactgtccctaatcacacgccgcaaaatccggagacggttatgctcaacgcgcgcttatataagggtga 2674561  T
Q  200 acttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  2674562 acttacttcatcctcaaggtatgattcacttttcacaacactttctacacact 2674614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 254
Target Start/End: Complemental strand, 29157340 - 29157151
Alignment:
Q  65 agctcaagtacaccgcgccacacaggagcacaccttcgcgcgaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaa 164  Q
    ||||||| | ||||||||||||||||||| | ||  |||| |||||||| ||||||| ||||||||||| ||||||| |||   |||  |||| || ||     
T  29157340 agctcaaatgcaccgcgccacacaggagcgcgccaccgcgtgaggatcatcctacatgtgtcctctaaccgtccctaatcattagccgcataacccagag 29157241  T
Q  165 gcggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacacttt 254  Q
     |||||||   | ||| ||| ||||| |||||||||||| ||||| | |||||| ||| |||||||| |||||||||| |||||||||||    
T  29157240 acggttatcctctacgcgcgcctatataagggtgaacttacttcaccatcaaggtatggttcactttacacaacacttactacacacttt 29157151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 12683896 - 12683836
Alignment:
Q  192 aagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  12683896 aagggtgaacttgcttcacccttaaggtatgattcacttttcacaacactttctacacact 12683836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 252
Target Start/End: Complemental strand, 19643903 - 19643753
Alignment:
Q  101 cgcgcgaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaa 200  Q
    ||||||||||||||| || || ||||||||| | ||||||| || ||||||  ||||  | ||  |||||||   |||||  || ||||| |||||||||    
T  19643903 cgcgcgaggatcaccttatatgtgtcctctacc-gtccctaatctcacgccgcataactcagagacggttatcctcaacgcacgcctatataagggtgaa 19643805  T
Q  201 cttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||| |||| |||||||| |||||||||||||||||| ||||||||||||||    
T  19643804 cttgtttcaccctcaaggtatgattcacttttcacaagactttctacacact 19643753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 47253394 - 47253328
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||| ||||||||  | |||||| |||||||| |||||||||||||||||||||||| ||||||||    
T  47253394 ctatataagggtgacttagcttcaccctcaaggtatgattcacttttcacaacactttttacacact 47253328  T

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Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 206 - 252
Target Start/End: Complemental strand, 19809798 - 19809752
Alignment:
Q  206 ttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||| |||||||| || ||||||||||||||||||||||||||||||    
T  19809798 ttcaccctcaaggtataattcacttttcacaacactttctacacact 19809752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 206 - 252
Target Start/End: Complemental strand, 19818790 - 19818744
Alignment:
Q  206 ttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||| |||||| || ||||||||||||||||||||||||||||||    
T  19818790 ttcatcatcaaggtataattcacttttcacaacactttctacacact 19818744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 5518657 - 5518601
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactt 242  Q
    ||||| |||||||||||||||||| |||||||| | |  ||||||| ||||||||||    
T  5518657 ctatataagggtgaacttgcttcaccctcaaggtacgcatcactttccacaacactt 5518601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 67 - 252
Target Start/End: Original strand, 26762766 - 26762951
Alignment:
Q  67 ctcaagtacaccgcgccacacaggagcacaccttcgcgcgaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaagc 166  Q
    ||||||| |||| |||||||| | ||||| ||   |||||||||||||| ||||  ||||||||||| ||||||| |||||||||  | || ||||| |     
T  26762766 ctcaagtgcaccacgccacaccgtagcacgcccctgcgcgaggatcaccatacaagtgtcctctaaccgtccctaatcacacgccccaaaacccggaggt 26762865  T
Q  167 ggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||| | ||||  ||| ||||| | |||||  ||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  26762866 ggttatcaacaacacgcgcctatatatgggtgtccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacact 26762951  T

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Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 252
Target Start/End: Original strand, 9135220 - 9135401
Alignment:
Q  70 aagtacaccgcgccacacaggagcacaccttcgcgcgaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaagcggt 169  Q
    |||||||||| ||| ||||| ||| | ||  ||| ||||||||||| ||||| |||||||   | ||||||| |||||||| | |||| |||||  ||||    
T  9135220 aagtacaccgtgccgcacagaagcgcgcccccgcacgaggatcaccttacatgtgtcctcctcc-gtccctaatcacacgctacataacccggagacggt 9135318  T
Q  170 tataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||| |||||   | ||||||| ||||||||| |||||||| |||||||| |||||||||||||||||||| ||| ||||||||    
T  9135319 tatgaccaatacgtgtctatataagggtgaatttgcttcaccctcaaggtatgattcacttttcacaacagtttttacacact 9135401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 252
Target Start/End: Complemental strand, 5863390 - 5863238
Alignment:
Q  100 tcgcgcgaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtga 199  Q
    |||| ||||||||||  ||||  ||||||||||| ||||||| ||||| |||    || ||||| ||||||||  |||||| ||| ||||||||||||||    
T  5863390 tcgcacgaggatcacgttacacgtgtcctctaaccgtccctaatcacatgccgtgaaacccggaggcggttatttccaacgcgcgcctatacaagggtga 5863291  T
Q  200 acttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
      ||||| || |||||||| ||||||||||||| |||||| ||||||||||||    
T  5863290 cattgctccaccctcaaggtatgattcactttttacaacattttctacacact 5863238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 252
Target Start/End: Original strand, 13291988 - 13292163
Alignment:
Q  76 accgcgccacacaggagcacaccttcgcgcgaggatcaccctacatatgtcct-ctaactgtccctattcacacgccagataatccggaagcggttataa 174  Q
    |||| ||||||||||||| | ||||||||| ||||||||||||||  |||| | ||  | |||||||  ||||||||  |||| |||||  |||||||      
T  13291988 accgtgccacacaggagcgcgccttcgcgcaaggatcaccctacacgtgtcatgct--ccgtccctaaccacacgccgcataacccggagacggttatgg 13292085  T
Q  175 ccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||| ||| ||||| || ||||||||||||||| |||||||| |    ||||||||||||||||||  ||||||||    
T  13292086 ccaacgcgcgcctatataatggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcttacacact 13292163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 252
Target Start/End: Complemental strand, 39879568 - 39879438
Alignment:
Q  123 tgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcc-tcaaggcat 221  Q
    ||||||| || ||| |||| |||||||||  | ||| |||| ||||||||  |||| ||||||||||| ||||||||  |||||||  || ||| |||||    
T  39879568 tgtcctccaaatgttcctaatcacacgccgcaaaattcggaggcggttatttccaatgtgcgtctatataagggtgacattgcttcccccctcatggcat 39879469  T
Q  222 gattcacttttcacaacactttctacacact 252  Q
    ||||||||||| |||||||||| ||||||||    
T  39879468 gattcactttttacaacactttttacacact 39879438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 12644923 - 12644834
Alignment:
Q  166 cggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttca-caacactttctacacacttt 254  Q
    ||||||| ||||||| ||| || ||||||||||||||||||||| |||||| | |  |||||||||||| |||||||||| |||||||||    
T  12644923 cggttatgaccaacgcgcgcctctacaagggtgaacttgcttcaccctcaacgtacaattcacttttcaccaacactttccacacacttt 12644834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 257
Target Start/End: Complemental strand, 16204408 - 16204337
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacactttctc 257  Q
    ||||| ||||||||| || ||||| ||| |||| ||| |||||||||||||||||||| |||||||| ||||    
T  16204408 ctatataagggtgaattttcttcacccttaaggtatggttcacttttcacaacactttatacacactctctc 16204337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 29373556 - 29373497
Alignment:
Q  193 agggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||||  |||||||| |||||||| |||||||| ||||||||||| ||||||||||||    
T  29373556 agggtgacattgcttcaccctcaaggtatgattcaattttcacaacattttctacacact 29373497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 43172010 - 43172065
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacact 241  Q
    ||||| ||||||||| |||||||| |||||| | ||||||||||||||||||||||    
T  43172010 ctatataagggtgaagttgcttcaccctcaatgtatgattcacttttcacaacact 43172065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 7486656 - 7486598
Alignment:
Q  192 aagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacaca 250  Q
    |||||||||||| ||||| | | |||| ||||||||||||||||||||| |||||||||    
T  7486656 aagggtgaactttcttcacctttaagggatgattcacttttcacaacaccttctacaca 7486598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 16987016 - 16987132
Alignment:
Q  136 tccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcac 235  Q
    |||||| |||||| ||  ||||||||||  |||||||  |||||| ||| ||||| |||||||||||||||||| | | |||| |    |||||||||||    
T  16987016 tccctaatcacacaccgcataatccggagacggttatggccaacgcgcgcctatataagggtgaacttgcttcacctttaagggacacatcacttttcac 16987115  T
Q  236 aacactttctacacact 252  Q
    |||||||  ||||||||    
T  16987116 aacacttcttacacact 16987132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 251
Target Start/End: Complemental strand, 21161324 - 21161293
Alignment:
Q  220 atgattcacttttcacaacactttctacacac 251  Q
    ||||||||||||||||||||||||||||||||    
T  21161324 atgattcacttttcacaacactttctacacac 21161293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 9867937 - 9867975
Alignment:
Q  210 tcctcaaggcatgattcacttttcacaacactttctaca 248  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  9867937 tcctcaaggtatgattcacttttaacaacactttctaca 9867975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 12265099 - 12265156
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacacttt 243  Q
    ||||| |||||||||||||||| | |||||||| | |  |||||||||||||||||||    
T  12265099 ctatataagggtgaacttgcttgaccctcaaggtacgcatcacttttcacaacacttt 12265156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 16704549 - 16704456
Alignment:
Q  156 aatccggaagcggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacac 249  Q
    |||||||| |||||||| ||||||| ||| ||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  16704549 aatccggaggcggttatcaccaacgcgcgcctatataagggtgaacttgcttcaccctcaaggtatgattcacttttcacaacactttctacac 16704456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 9801058 - 9801124
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||| ||||||||  |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  9801058 ctatataagggtgacattgcttcaccctcaaggtatgattcacttttcacaacactttctacacact 9801124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 252
Target Start/End: Complemental strand, 1771025 - 1770876
Alignment:
Q  101 cgcgcgaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaa 200  Q
    ||||||||||||||| ||| |  |||||||| | ||||||| ||| |||||  ||||| ||||  |||||||   ||||| ||  ||||| ||||| |||    
T  1771025 cgcgcgaggatcaccttacgt--gtcctctatc-gtccctaatcatacgccgcataattcggagacggttatgcacaacgcgcacctatataagggcgaa 1770929  T
Q  201 cttgcttcatcctcaaggc--atgattcacttttcacaacactttctacacact 252  Q
    |||||||||||||||||||  ||||| |||||||||||||||||||||||||||    
T  1770928 cttgcttcatcctcaaggcgcatgat-cacttttcacaacactttctacacact 1770876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 2311804 - 2311872
Alignment:
Q  182 gcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacaca 250  Q
    ||||||| | ||||||||  |||||||| |||||||| ||||||||| |||||||||||||||||||||    
T  2311804 gcgtctaaataagggtgacattgcttcaccctcaaggtatgattcacctttcacaacactttctacaca 2311872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 20622524 - 20622468
Alignment:
Q  187 tatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacacttt 243  Q
    |||| |||||||||||||||||| |||||||| ||||||||||||||||| ||||||    
T  20622524 tatataagggtgaacttgcttcaccctcaaggtatgattcacttttcacaccacttt 20622468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 17143724 - 17143789
Alignment:
Q  187 tatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||| ||||||||  ||| |||| || ||||| |||||||||||||||||||||||||||||||||    
T  17143724 tatataagggtgatgttgtttcacccccaaggtatgattcacttttcacaacactttctacacact 17143789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 28715468 - 28715528
Alignment:
Q  192 aagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||||||  ||| |||| |||||||| |||||||||||||||||||||||| ||||||||    
T  28715468 aagggtgatattgtttcaccctcaaggtatgattcacttttcacaacactttatacacact 28715528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 30607054 - 30606979
Alignment:
Q  177 aacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||| ||| ||||| |||||||  ||| ||||| |||||||| || ||||||||||||||||||||||||| ||||    
T  30607054 aacgcgcgcctatataagggtggccttacttcaccctcaaggtataattcacttttcacaacactttctactcact 30606979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 21342261 - 21342327
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||| |||||| | ||| ||||| |||||| | ||||||||||||||||||||||||||| |||||    
T  21342261 ctatataagggtaaccttacttcaccctcaatgtatgattcacttttcacaacactttctatacact 21342327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 8122895 - 8122947
Alignment:
Q  192 aagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttc 244  Q
    ||||||||  |||||||| |||||||| ||||||||||||||||||| |||||    
T  8122895 aagggtgacattgcttcaccctcaaggtatgattcacttttcacaacgctttc 8122947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 9800977 - 9801024
Alignment:
Q  104 gcgaggatcaccctacatatgtcctctaactgtccctattcacacgcc 151  Q
    |||||| ||||||||||| ||||||||||| ||||||| |||||||||    
T  9800977 gcgagggtcaccctacatgtgtcctctaaccgtccctaatcacacgcc 9801024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 218
Target Start/End: Complemental strand, 12108587 - 12108504
Alignment:
Q  135 gtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaagg 218  Q
    ||||||| ||||| |||  |||| ||||| || ||||| ||||||| | | ||||| |||||||||||||||||| ||||||||    
T  12108587 gtccctaatcacaagccgcataacccggaggccgttatgaccaacgcgtgcctatataagggtgaacttgcttcaccctcaagg 12108504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 25496103 - 25496032
Alignment:
Q  138 cctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaacttgcttca 209  Q
    |||| |||||||||  |||| |||||  ||||||| | ||||||||| ||||| ||||||||||||||||||    
T  25496103 cctaatcacacgccgcataacccggagacggttatgatcaacgtgcgcctatataagggtgaacttgcttca 25496032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 248
Target Start/End: Original strand, 7835548 - 7835610
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctaca 248  Q
    ||||| |||| ||||||||||||||| |||||  | |  ||||||||||||||||||||||||    
T  7835548 ctataaaaggatgaacttgcttcatcatcaagatacgtatcacttttcacaacactttctaca 7835610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 14860073 - 14860129
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactt 242  Q
    ||||| |||||||||||||||||| |||||||| |    ||||||||||||||||||    
T  14860073 ctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaacactt 14860129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 5e-28; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 101 - 252
Target Start/End: Original strand, 32418375 - 32418526
Alignment:
Q  101 cgcgcgaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaa 200  Q
    ||||||||||||||||||||  ||||| |||||  |||||| |||||||||  |||| |||||  | ||||     ||||  ||||||||||||||||||    
T  32418375 cgcgcgaggatcaccctacacgtgtcccctaaccatccctaatcacacgccgcataacccggagacagttaagcttaacgcacgtctatacaagggtgaa 32418474  T
Q  201 cttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  32418475 cttgcttcatcctcaaggtatgattcactcttcacaacactctctacacact 32418526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 22903209 - 22903144
Alignment:
Q  187 tatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||| ||||||||  ||| |||| |||||||| |||||||||||||||||||||||||||||||||    
T  22903209 tatataagggtgatattgtttcaccctcaaggtatgattcacttttcacaacactttctacacact 22903144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 20025394 - 20025334
Alignment:
Q  192 aagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||||| || |||||| |||||||| |||||||||||| ||||||||||||||||||||    
T  20025394 aagggtgacctagcttcaccctcaaggaatgattcactttacacaacactttctacacact 20025334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 26994570 - 26994646
Alignment:
Q  176 caacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||| ||| ||||| |||||||| ||||||||| || ||||| ||||||||||||||||||||| ||||| |||||    
T  26994570 caacgcgcgcctatataagggtgaccttgcttcacccccaaggtatgattcacttttcacaacaccttctaaacact 26994646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 258
Target Start/End: Complemental strand, 25333851 - 25333780
Alignment:
Q  187 tatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacactttctct 258  Q
    |||| ||| ||||||||||||||  ||||| | ||||||||||||| ||||||||||||||||||| |||||    
T  25333851 tatataagagtgaacttgcttcactctcaaagtatgattcacttttaacaacactttctacacactctctct 25333780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 27083231 - 27083278
Alignment:
Q  205 cttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||    
T  27083231 cttcaccctcaaggtatgattcacttttcacaacactttctacacact 27083278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 34493610 - 34493561
Alignment:
Q  206 ttcatcctcaaggcatgattcacttttcacaacactttctacacactttc 255  Q
    |||| |||||||| |||||||||||||||||||||||||||||| |||||    
T  34493610 ttcaccctcaaggtatgattcacttttcacaacactttctacactctttc 34493561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 22865910 - 22865810
Alignment:
Q  154 ataatccggaagcggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacactt 253  Q
    ||||||||||| |||||||  ||||||  || ||||| |||||||||||||||||| |||||||| |    ||||||||||||||| ||  |||||||||    
T  22865910 ataatccggaaacggttatggccaacgcacgcctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaacatttcttacacactt 22865811  T
Q  254 t 254  Q
    |    
T  22865810 t 22865810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 31202329 - 31202381
Alignment:
Q  166 cggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaagg 218  Q
    ||||||| ||||||||||| ||||| |||||||||||||||||| ||||||||    
T  31202329 cggttatgaccaacgtgcgcctatataagggtgaacttgcttcaccctcaagg 31202381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 203
Target Start/End: Complemental strand, 24546569 - 24546442
Alignment:
Q  75 caccgcgccacacaggagcacaccttcgcgcgaggatcaccctacatatgtcct-ctaactgtccctattcacacgccagataatccggaagcggttata 173  Q
    ||||| ||||||||||||| ||||| ||||| ||||||||||||||  |||| | ||  | ||||||| |||||||||  |||| |||||  |||||||     
T  24546569 caccgtgccacacaggagcgcacctccgcgcaaggatcaccctacacgtgtcttgct--ccgtccctaatcacacgccgcataacccggagacggttatg 24546472  T
Q  174 accaacgtgcgtctatacaagggtgaactt 203  Q
     | |||| ||| ||||| ||||||||||||    
T  24546471 gctaacgcgcgcctatataagggtgaactt 24546442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 24647405 - 24647339
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||| |||||||||||||||||| ||| |||| ||   ||||||||||||||||||  ||||||||    
T  24647405 ctatataagggtgaacttgcttcacccttaaggtatacatcacttttcacaacacttcttacacact 24647339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 25537522 - 25537466
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactt 242  Q
    ||||| |||||||||||| ||||| |||||||| ||   ||||||||||||||||||    
T  25537522 ctatataagggtgaactttcttcaccctcaaggtatacatcacttttcacaacactt 25537466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 104 - 246
Target Start/End: Original strand, 15323 - 15464
Alignment:
Q  104 gcgaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaactt 203  Q
    |||||||||||| ||||| |||||||    |||||||| ||||| | |  ||||||||||  ||||||| || |||||||  ||||| ||||||||||||    
T  15323 gcgaggatcaccttacatgtgtcctcctt-tgtccctaatcacatgtcgcataatccggacacggttatgactaacgtgcacctatataagggtgaactt 15421  T
Q  204 gcttcatcctcaaggcatgattcacttttcacaacactttcta 246  Q
    |||||| |||||||| |||||||||||||||||||||||||||    
T  15422 gcttcaccctcaaggtatgattcacttttcacaacactttcta 15464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 206 - 252
Target Start/End: Original strand, 8571 - 8617
Alignment:
Q  206 ttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||| ||| |||| |||||||||||||||||||||||||||||||||    
T  8571 ttcacccttaaggtatgattcacttttcacaacactttctacacact 8617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 7e-24; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 104 - 240
Target Start/End: Complemental strand, 11087701 - 11087565
Alignment:
Q  104 gcgaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaactt 203  Q
    |||||||||||||||||  ||||||||||| |||| || | |||||||  ||||||||||  | |||||   ||||| ||  ||||| ||||||||||||    
T  11087701 gcgaggatcaccctacacgtgtcctctaaccgtccttaattacacgccgcataatccggagacagttatgctcaacgcgcacctatataagggtgaactt 11087602  T
Q  204 gcttcatcctcaaggcatgattcacttttcacaacac 240  Q
    | ||||||||||||| |||||||||||||||||||||    
T  11087601 gtttcatcctcaaggtatgattcacttttcacaacac 11087565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 254
Target Start/End: Complemental strand, 33597063 - 33596910
Alignment:
Q  101 cgcgcgaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaa 200  Q
    ||||||||| ||| ||||||| ||||||||||| | ||||| ||| |||||  |||||||||   |  ||||   ||| | ||| ||||| ||| |||||    
T  33597063 cgcgcgagggtcatcctacatgtgtcctctaaccgcccctaatcatacgccgcataatccggtgacaattatgctcaaagcgcgcctatataagagtgaa 33596964  T
Q  201 cttgcttcatcctcaaggcatgattcacttttcacaacactttctacacacttt 254  Q
    |||||||||||||||||| |||||||  ||||||||||||||||||||||||||    
T  33596963 cttgcttcatcctcaaggtatgattccattttcacaacactttctacacacttt 33596910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 105 - 248
Target Start/End: Original strand, 31423731 - 31423873
Alignment:
Q  105 cgaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaacttg 204  Q
    ||||||||||||||||| |||||||||| ||||||   ||||||| |  |||| |||||  |||| ||  |||||  ||| ||||| ||||||| |||||    
T  31423731 cgaggatcaccctacatgtgtcctctaattgtccccgatcacacgtcgcataacccggacacggt-atgcccaacacgcgcctatataagggtgcacttg 31423829  T
Q  205 cttcatcctcaaggcatgattcacttttcacaacactttctaca 248  Q
    ||||| ||||||| |||||||||||| |||||||||||||||||    
T  31423830 cttcaccctcaagacatgattcacttctcacaacactttctaca 31423873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 252
Target Start/End: Complemental strand, 18147519 - 18147357
Alignment:
Q  90 gagcacaccttcgcgcgaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctat 189  Q
    ||||||||| ||  |||||||||||| |||| |||||||||||| ||||||| ||||||||   | || || || |||||||   |||| | ||  ||||    
T  18147519 gagcacaccctcatgcgaggatcaccttacacatgtcctctaaccgtccctaatcacacgctgcaaaacccagaggcggttaatcccaatgcgcacctat 18147420  T
Q  190 acaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    | ||||||||  |||||||| ||| |||| |||| ||||||||||||||||||||||||||||    
T  18147419 ataagggtgacattgcttcaccctaaaggtatgagtcacttttcacaacactttctacacact 18147357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 251
Target Start/End: Original strand, 689712 - 689896
Alignment:
Q  66 gctcaagtacaccgcgccacacaggagcacaccttcgcgcgaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaag 165  Q
    |||||||| ||||| |||||||| ||||||  |  |||||||||| |||||| ||  | |||||||||||||| || |||||||||  | ||  ||||      
T  689712 gctcaagtgcaccgtgccacacaagagcacgtccccgcgcgaggaccacccttcacgtatcctctaactgtccttaatcacacgccgcaaaactcggaga 689811  T
Q  166 cggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacac 251  Q
    || |||| | ||||||||| ||||| |||||||| |||| | || |||||||| | |||||||||||||||||||||| |||||||    
T  689812 cgattatgatcaacgtgcgcctatataagggtgaccttgat-cagcctcaaggtacgattcacttttcacaacactttatacacac 689896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 19305575 - 19305515
Alignment:
Q  192 aagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  19305575 aagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacact 19305515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 254
Target Start/End: Original strand, 15480252 - 15480383
Alignment:
Q  123 tgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatg 222  Q
    |||| ||||| |||||||| ||||| |||  | |||| ||| ||||||||  ||||| |||  ||||| ||||||||  | ||||||  ||||||| |||    
T  15480252 tgtcttctaattgtccctaatcacatgccgtaaaatctggatgcggttatttccaacatgcacctatataagggtgacttagcttcactctcaaggtatg 15480351  T
Q  223 attcacttttcacaacactttctacacacttt 254  Q
    ||||||||||||||||||||||||||||||||    
T  15480352 attcacttttcacaacactttctacacacttt 15480383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 257
Target Start/End: Complemental strand, 20148432 - 20148361
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacactttctc 257  Q
    ||||| |||||||| ||||||||| | |||||| |||||||||||||||||||||||||||||| |||||||    
T  20148432 ctatataagggtgaccttgcttcaccatcaaggtatgattcacttttcacaacactttctacactctttctc 20148361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 257
Target Start/End: Original strand, 22184396 - 22184467
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacactttctc 257  Q
    ||||| |||||||| ||||||||| | |||||| |||||||||||||||||||||||||||||| |||||||    
T  22184396 ctatataagggtgaccttgcttcaccatcaaggtatgattcacttttcacaacactttctacactctttctc 22184467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 252
Target Start/End: Complemental strand, 17380292 - 17380148
Alignment:
Q  108 ggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaacttgctt 207  Q
    |||||||| ||| | | |||||||||||| |||| |||||||||| | || |  || ||||||||  ||||||  || ||||| |||||||| ||||| |    
T  17380292 ggatcaccttacttgtttcctctaactgttcctaatcacacgccataaaacctagaggcggttattcccaacgcacgcctatataagggtgaccttgcgt 17380193  T
Q  208 catcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    || ||| |||| | |||||||||||||||||||||| | ||||||    
T  17380192 caacctgaaggtaagattcacttttcacaacactttattcacact 17380148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 252
Target Start/End: Complemental strand, 22572242 - 22572095
Alignment:
Q  105 cgaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaacttg 204  Q
    |||||||||||| |||  ||||||||||| ||||||| ||| ||  |  |||| | |||  |||||||   ||||| ||| | ||| || ||||||||||    
T  22572242 cgaggatcaccccacacgtgtcctctaaccgtccctaatcatacttcgcataacctggagacggttatgctcaacgcgcgccaatataaaggtgaacttg 22572143  T
Q  205 cttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||| |||||||  |||||||||||| |||||||| |||||||||||    
T  22572142 cttcaccctcaagatatgattcactttacacaacaccttctacacact 22572095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 3404855 - 3404902
Alignment:
Q  205 cttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  3404855 cttcaccctcaaggtatgattcatttttcacaacactttctacacact 3404902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 16131085 - 16131026
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttct 245  Q
    ||||| |||||| |||||| |||| |||||||| ||||||||| ||||||||||||||||    
T  16131085 ctatataagggtaaacttgtttcaccctcaaggtatgattcacgtttcacaacactttct 16131026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 30681093 - 30681046
Alignment:
Q  202 ttgcttcatcctcaaggcatgattcacttttcacaacactttctacac 249  Q
    ||||||||||||||||| |||||||||||||||||| || ||||||||    
T  30681093 ttgcttcatcctcaaggtatgattcacttttcacaatacattctacac 30681046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 252
Target Start/End: Original strand, 19277030 - 19277116
Alignment:
Q  166 cggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||||| ||||| | ||| ||||| |||||||||||||||||| |||||||| |    ||||||||||||||||||  ||||||||    
T  19277030 cggttatgaccaaagcgcgcctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcttacacact 19277116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 34572987 - 34573036
Alignment:
Q  205 cttcatcctcaaggcatgattcacttttcacaacactttctacacacttt 254  Q
    ||||| |||||| | |||||||||||||||| ||||||||||||||||||    
T  34572987 cttcaccctcaatgtatgattcacttttcaccacactttctacacacttt 34573036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 248
Target Start/End: Original strand, 12203631 - 12203674
Alignment:
Q  205 cttcatcctcaaggcatgattcacttttcacaacactttctaca 248  Q
    ||||| |||||| | |||||||||||||||||||||||||||||    
T  12203631 cttcaccctcaaagtatgattcacttttcacaacactttctaca 12203674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 252
Target Start/End: Complemental strand, 34064415 - 34064246
Alignment:
Q  82 ccacacaggagcacaccttcgcgcgaggatcaccctacatatgtcctctaact--gtccctattcacacgccagataatccggaagcggttataaccaac 179  Q
    |||||||||||| | ||||||||| ||||||||| ||||| ||||||   |||  | ||||| ||||  |||  |||| ||||   |||||||  |||||    
T  34064415 ccacacaggagcgcgccttcgcgcaaggatcaccatacatgtgtcct---acttcgcccctaatcacgtgccgcataacccggtgacggttatggccaac 34064319  T
Q  180 gtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
      ||| ||||| |||||||||||||||||| |||||||| |    ||||||||||||||||||  ||||||||    
T  34064318 tcgcgcctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcttacacact 34064246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 14080566 - 14080534
Alignment:
Q  220 atgattcacttttcacaacactttctacacact 252  Q
    ||||||||||||||||||||||| |||||||||    
T  14080566 atgattcacttttcacaacacttactacacact 14080534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 14268514 - 14268482
Alignment:
Q  220 atgattcacttttcacaacactttctacacact 252  Q
    ||||||||||||||| |||||||||||||||||    
T  14268514 atgattcacttttcaaaacactttctacacact 14268482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 254
Target Start/End: Complemental strand, 22415013 - 22414824
Alignment:
Q  65 agctcaagtacaccgcgccacacaggagcacaccttcgcgcgaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaa 164  Q
    ||||||||| ||| ||||||||||  ||| ||||   ||| |||||||||| ||||| |||| ||||||||||| || ||| |||||  ||||  ||||     
T  22415013 agctcaagtgcactgcgccacacataagcgcacccctgcgtgaggatcaccttacatgtgtcatctaactgtccataatcatacgccgcataacacggag 22414914  T
Q  165 gcggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacacttt 254  Q
     | |||||   | |||   | |||||||||| ||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||    
T  22414913 accgttatgctcgacgcatgcctatacaaggatgaacttgcttcaccctcaagatatgattcacttttcacaacactttctacacacttt 22414824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 12177503 - 12177437
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||| |||| |||||||||||| ||||||||| || ||||||||||||||||||||||||||||||    
T  12177503 ctatataaggttgaacttgcttcctcctcaaggtataattcacttttcacaacactttctacacact 12177437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 252
Target Start/End: Complemental strand, 16050591 - 16050445
Alignment:
Q  106 gaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaacttgc 205  Q
    |||||||||||||||  |||||||||||||||  || |||||| ||  | |||||||||    ||||  |||| | ||  ||||| |||||||   ||||    
T  16050591 gaggatcaccctacacgtgtcctctaactgtctttaatcacacaccgcaaaatccggaatgatttattcccaatgcgcacctatataagggtggcattgc 16050492  T
Q  206 ttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||||||    
T  16050491 ttcatcctcaaggtatggttcacttttcaccacactttctacacact 16050445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 23280245 - 23280307
Alignment:
Q  195 ggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacactttctc 257  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||| |  ||||||||||||    
T  23280245 ggtgaacttgcttcaccctcatggcattattcacttttcacaacactatacacacactttctc 23280307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 26977857 - 26977791
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||| |||||| || |||||||| |||||||| |||||||| ||||||||| ||||||||||||||    
T  26977857 ctatataagggtcaaattgcttcaccctcaaggtatgattcatttttcacaatactttctacacact 26977791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 16030487 - 16030446
Alignment:
Q  211 cctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  16030487 cctcaaggtatgattcacttttcacaacactttctacacact 16030446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 52565691 - 52565638
Alignment:
Q  192 aagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttct 245  Q
    |||| ||||||||||||| |||||||  ||||||||||||||||||||||||||    
T  52565691 aaggatgaacttgcttcaccctcaagttatgattcacttttcacaacactttct 52565638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 252
Target Start/End: Original strand, 23728774 - 23728860
Alignment:
Q  166 cggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||||  |||||||||| ||||| ||||||||||||| |||| |||||||| |    ||||||||||||||||||  ||||||||    
T  23728774 cggttatggccaacgtgcgcctatataagggtgaacttgtttcaccctcaaggtacacatcacttttcacaacacttcttacacact 23728860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 252
Target Start/End: Complemental strand, 34273188 - 34273138
Alignment:
Q  202 ttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||||| |||||||| |||| ||||||| ||||||||||||||||||||    
T  34273188 ttgcttcaccctcaaggtatgagtcactttacacaacactttctacacact 34273138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 2140918 - 2140986
Alignment:
Q  182 gcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacaca 250  Q
    |||||| || ||||||||  | |||||| |||||||| ||| |||||||| ||||||||||||||||||    
T  2140918 gcgtctttataagggtgacttagcttcaccctcaaggtatggttcactttccacaacactttctacaca 2140986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 5671853 - 5671821
Alignment:
Q  220 atgattcacttttcacaacactttctacacact 252  Q
    |||||||||||||||||||||||||||||||||    
T  5671853 atgattcacttttcacaacactttctacacact 5671821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 14254906 - 14254958
Alignment:
Q  75 caccgcgccacacaggagcacaccttcgcgcgaggatcaccctacatatgtcc 127  Q
    ||||| ||||||||||||||| |  ||||||||||||||||||||| ||||||    
T  14254906 caccgtgccacacaggagcacgctatcgcgcgaggatcaccctacacatgtcc 14254958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 5459702 - 5459749
Alignment:
Q  205 cttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||||| ||| | |||||||||||| ||||||||||||||||||||    
T  5459702 cttcatccccaatgtatgattcactttacacaacactttctacacact 5459749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 33101519 - 33101549
Alignment:
Q  224 ttcacttttcacaacactttctacacacttt 254  Q
    |||||||||||||||||||||||||||||||    
T  33101519 ttcacttttcacaacactttctacacacttt 33101549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 25408207 - 25408147
Alignment:
Q  192 aagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||||||||||||||| |||||||| |    ||||||||||||||||||  ||||||||    
T  25408207 aagggtgaacttgcttcaccctcaagggacacatcacttttcacaacacttcttacacact 25408147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 7e-21; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 117 - 252
Target Start/End: Complemental strand, 21416924 - 21416789
Alignment:
Q  117 tacatatgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaa 216  Q
    ||||| |||||||||||  ||| || ||||| |||  |||| |||||  |||||||  |||||| ||  |||||||||||||||||||||||| ||| ||    
T  21416924 tacatgtgtcctctaaccatccataatcacaggccgcataacccggagacggttatgcccaacgcgcccctatacaagggtgaacttgcttcacccttaa 21416825  T
Q  217 ggcatgattcacttttcacaacactttctacacact 252  Q
    || | |||||| ||||||||||||||||||||||||    
T  21416824 ggtacgattcatttttcacaacactttctacacact 21416789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 258
Target Start/End: Original strand, 26916814 - 26916944
Alignment:
Q  128 tctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattca 227  Q
    ||||| |||||||| |||||||||  | || | ||| ||||||||   ||||| ||| ||||| ||||| ||  ||||||||| ||||||| |||| |||    
T  26916814 tctaattgtccctaatcacacgccgcaaaacctggaggcggttattctcaacgcgcgcctatataagggcgacattgcttcatgctcaaggtatgactca 26916913  T
Q  228 cttttcacaacactttctacacactttctct 258  Q
    ||||||||||||||||||||||||| |||||    
T  26916914 cttttcacaacactttctacacactctctct 26916944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 18323060 - 18322996
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacaca 250  Q
    ||||| |||||||| |||||||||||||||| | |||||||||||||||||||| ||||||||||    
T  18323060 ctatataagggtgaccttgcttcatcctcaatgtatgattcacttttcacaacattttctacaca 18322996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 252
Target Start/End: Complemental strand, 30477839 - 30477692
Alignment:
Q  105 cgaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaacttg 204  Q
    ||||| ||||||||||| |||||||||||| | | || |||||||| | | ||  | || ||||||||   | |||  || ||||| ||||||||  ||     
T  30477839 cgaggttcaccctacatgtgtcctctaactattcttaatcacacgcaacaaaactcagaggcggttattctcgacgcacgcctatataagggtgacatta 30477740  T
Q  205 cttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||    
T  30477739 cttcaccctcaaggtatgattcacttttcacaacactttctacacact 30477692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 245
Target Start/End: Original strand, 17319586 - 17319665
Alignment:
Q  164 agcggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttct 245  Q
    ||||||||| |||||  |||| ||||| || ||||||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  17319586 agcggttatgaccaa--tgcgcctatataaaggtgaacttgcttcaccctcgaggcatgattcacttttcacaactctttct 17319665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 252
Target Start/End: Complemental strand, 5860014 - 5859866
Alignment:
Q  104 gcgaggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaactt 203  Q
    ||||||||||| |||||  |||| | |||| ||||||| |||| ||||  | ||||| || ||||||||  |||||| ||| ||||| |||||||| |||    
T  5860014 gcgaggatcactctacacgtgtcatttaaccgtccctaatcactcgccgcaaaatccagaggcggttatttccaacgcgcgcctatataagggtgacctt 5859915  T
Q  204 gcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||||  ||||||| | ||||||||| ||| |||||| || |||||||    
T  5859914 gcttcaatctcaaggtacgattcacttctcaaaacactctcaacacact 5859866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 6928070 - 6928130
Alignment:
Q  192 aagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||||||| ||  |||| |||||||| |||||||||||||||||||||||||||||||||    
T  6928070 aagggtgaaattaattcaccctcaaggtatgattcacttttcacaacactttctacacact 6928130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 24507584 - 24507508
Alignment:
Q  176 caacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||||||  ||||| | |||||||| | ||||| |||||||| ||||||||||||||||||||||||||| |||||    
T  24507584 caacgtgcacctatatatgggtgaacctacttcaccctcaaggtatgattcacttttcacaacactttctagacact 24507508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 3459458 - 3459524
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttca-caacactttctacacact 252  Q
    ||||| |||||||||||||||||| |||||||| | |||| |||||||| ||||||||||||||||||    
T  3459458 ctatataagggtgaacttgcttca-cctcaaggtacgatttacttttcaccaacactttctacacact 3459524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 17698274 - 17698325
Alignment:
Q  201 cttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||||||| |||||| | || ||||||||||||||||||||||||||||||    
T  17698274 cttgcttcaccctcaaagtataattcacttttcacaacactttctacacact 17698325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 13754857 - 13754809
Alignment:
Q  204 gcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||| |||||||| | |||||||||| ||||||||||||||||||||    
T  13754857 gcttcaccctcaaggtaggattcactttacacaacactttctacacact 13754809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 23497137 - 23497194
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacacttt 243  Q
    ||||| ||||||||  |||||| | |||||||| |||||||||| |||||||||||||    
T  23497137 ctatataagggtgactttgcttaaccctcaaggtatgattcactattcacaacacttt 23497194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 248
Target Start/End: Complemental strand, 7220645 - 7220617
Alignment:
Q  220 atgattcacttttcacaacactttctaca 248  Q
    |||||||||||||||||||||||||||||    
T  7220645 atgattcacttttcacaacactttctaca 7220617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 13765088 - 13765040
Alignment:
Q  204 gcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||| | ||||| ||| ||||||||| ||||||||||||||||||||    
T  13765088 gcttcaccttcaagacattattcactttacacaacactttctacacact 13765040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 24070935 - 24070903
Alignment:
Q  220 atgattcacttttcacaacactttctacacact 252  Q
    ||||||||||| |||||||||||||||||||||    
T  24070935 atgattcacttctcacaacactttctacacact 24070903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 14039 - 13973
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||| |||||||| ||||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  14039 ctatataagggtgatcttgcttcaccctcaaggtatgattcacttctcacaacactttctacacact 13973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 6425 - 6349
Alignment:
Q  176 caacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||||||| ||||| |||| |||||||||||||  ||||||| | || ||||||||||||||||||||||||||||    
T  6425 caacgtgcgcctatataaggatgaacttgcttcacgctcaaggtacgactcacttttcacaacactttctacacact 6349  T

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Target: scaffold0054 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 257
Target Start/End: Original strand, 68776 - 68847
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacactttctc 257  Q
    ||||| |||||||| ||||||||  |||||||| ||||||||||||||||||||||||||| || |||||||    
T  68776 ctatataagggtgaccttgcttctccctcaaggtatgattcacttttcacaacactttctatactctttctc 68847  T

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Target: scaffold0023 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 252
Target Start/End: Original strand, 95705 - 95850
Alignment:
Q  107 aggatcaccctacatatgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaacttgct 206  Q
    |||||||| |||||| ||||||||||| ||||||| |||||||||  | ||  |||| |  | |||  | |||| | | ||||| ||||||||  |||||    
T  95705 aggatcactctacatgtgtcctctaaccgtccctaatcacacgccgcaaaactcggaggtagatattccaaacgcgtgcctatataagggtgacgttgct 95804  T
Q  207 tcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||| ||| |||| |||||||||||||||||||||||||||| ||||    
T  95805 tcaccctgaaggtatgattcacttttcacaacactttctacgcact 95850  T

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Target: scaffold0380 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 6784 - 6900
Alignment:
Q  136 tccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcac 235  Q
    |||||| |||||||||  |||| | |||  |||||||  |||||||||| ||||||||||||||||||| |||| |||||||| |    |||||||||||    
T  6784 tccctaatcacacgccgcataacctggagacggttatggccaacgtgcgcctatacaagggtgaacttgtttcaccctcaaggtacacatcacttttcac 6883  T
Q  236 aacactttctacacact 252  Q
    |||||||  ||||||||    
T  6884 aacacttcttacacact 6900  T

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Target: scaffold0101 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 10705 - 10764
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttct 245  Q
    ||||| || ||||||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  10705 ctatataaaggtgaacttgcttcaccctcgaggcatgattcacttttcacaactctttct 10764  T

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Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 252
Target Start/End: Original strand, 73756 - 73842
Alignment:
Q  166 cggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||||| |||||  ||| ||||| |  ||||||||||||||| ||| |||| |||||| ||||||||||||||||||||| ||||    
T  73756 cggttatacccaacacgcgcctatatattggtgaacttgcttcaccctgaaggtatgatttacttttcacaacactttctacgcact 73842  T

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Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 252
Target Start/End: Complemental strand, 379943 - 379767
Alignment:
Q  75 caccgcgccacacaggagcacaccttcgcgcgaggatcaccctacatatgtcct-ctaactgtccctattcacacgccagataatccggaagcggttata 173  Q
    ||||| ||||||||||||| | ||||| |  |||||||||||||||  |||||| ||  | |||| || |||||||||  ||||| | ||   ||||||     
T  379943 caccgtgccacacaggagcgcgccttcacaagaggatcaccctacacgtgtcctgct--ccgtccataatcacacgccgcataattcagagatggttatg 379846  T
Q  174 accaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    |||||| |||| ||||| | |||||||||||||||| |||||||| |    ||||||||||||||||||  ||||||||    
T  379845 accaacatgcgcctatatacgggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcttacacact 379767  T

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Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 120985 - 121051
Alignment:
Q  186 ctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacact 252  Q
    ||||| ||||||||| |||||||| |||||||| |    ||||||||||||||||||| ||||||||    
T  120985 ctatataagggtgaatttgcttcaccctcaaggtacacatcacttttcacaacactttatacacact 121051  T

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Target: scaffold0074 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 252
Target Start/End: Complemental strand, 35434 - 35304
Alignment:
Q  123 tgtcctctaactgtccctattcacacgccagataatccggaagcggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatg 222  Q
    ||||||||||| ||||||||||||| | ||||| | |||||  || ||||  |||||||| | ||||| |||||| ||   |||||  |||||| | |||    
T  35434 tgtcctctaaccgtccctattcacaggtcagatcagccggagacgattatgcccaacgtgtgcctatataagggtaaagccgcttccccctcaaaggatg 35335  T
Q  223 attcac-ttttcacaacactttctacacact 252  Q
    |||||| |||||||||||||||| |||||||    
T  35334 attcactttttcacaacactttccacacact 35304  T

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Target: scaffold0505 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 7968 - 7936
Alignment:
Q  220 atgattcacttttcacaacactttctacacact 252  Q
    |||||||||||||||||||||||||||||||||    
T  7968 atgattcacttttcacaacactttctacacact 7936  T

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Target: scaffold0174 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 249
Target Start/End: Original strand, 29285 - 29315
Alignment:
Q  219 catgattcacttttcacaacactttctacac 249  Q
    |||||||||||||||||||||||||||||||    
T  29285 catgattcacttttcacaacactttctacac 29315  T

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Target: scaffold0205 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 23022 - 22938
Alignment:
Q  167 ggttataaccaacgtgcgtctatacaagggtgaacttgcttcatcctcaaggcatgattcacttttcacaacactttctacacac 251  Q
    |||||| ||||||| ||  ||| | |||||||||||||||||| |||||||| |    ||||||||||||||||||  |||||||    
T  23022 ggttatcaccaacgcgcacctacataagggtgaacttgcttcaccctcaaggtacacgtcacttttcacaacacttcttacacac 22938  T

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