View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6363_high_13 (Length: 322)
Name: NF6363_high_13
Description: NF6363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6363_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 18 - 287
Target Start/End: Original strand, 35202742 - 35203000
Alignment:
| Q |
18 |
ggtaccaacggaaacataattgaaaataatctaaacaaagtaattctgaaagtaattccgttaaaattaataattgtcattctaaattggaatgaaatat |
117 |
Q |
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| T |
35202742 |
ggtaccaacggaaacataattgaaaataatctaaa------------gaaagtaattccgttaaaattaaca-ttgtcattctaaattggaatgaagtat |
35202828 |
T |
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| Q |
118 |
tccttgtattcttgaaaaataattcttcctttcatttttaaggggaaaa-aagatctttatcaacttcctccttccaaacatcccttaaaattctgacct |
216 |
Q |
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| T |
35202829 |
tccttgtattcttgaaaaataattcttcctttcatttttaaggggaaaaaaagatctttatcaacttcctctttccaaacatcccttaaaattctgacct |
35202928 |
T |
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| Q |
217 |
cttgcacattcctaccacccaatatgcacgattcatctccccaaaaataaaag-aaaataaatacccagcaa |
287 |
Q |
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| T |
35202929 |
cttgcacattcctaccacccaatatgcacgagtcatctccccaaaaataaaagaaaaaaaaatacccagcaa |
35203000 |
T |
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