View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6363_low_33 (Length: 227)
Name: NF6363_low_33
Description: NF6363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6363_low_33 |
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Alignment Details
Target: chr5 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 41116154 - 41116379
Alignment:
| Q |
1 |
caacagaaccagaaaatgcctctgaaatatcaacagcttctgcagactttaaattgctccaatgagacaacatatatccaaaaaataaaaccctgcctgc |
100 |
Q |
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| T |
41116154 |
caacagaaccagaaaatgcctctgaaatatcaacagcttctgcagactttaaattgctccaatgagacaacatatatccaaaaaataaaaccctgcctgc |
41116253 |
T |
|
| Q |
101 |
tcaaaagactccaaaacaagttcaacctaaaactttccaactaaacaatcacaaaatttgaactcctcaatggttctcttatcagcaccatcacgtaaca |
200 |
Q |
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||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
41116254 |
tcaaaagactccaaaacaagttcaacctaaaacattcccactaaacaatcaaaaaatttgaactcctcaatggttctctgatcagcaccatcacgtaaca |
41116353 |
T |
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| Q |
201 |
acggtgaaaagaatagccatgcagca |
226 |
Q |
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|||||| ||||||||||||||||||| |
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| T |
41116354 |
acggtggaaagaatagccatgcagca |
41116379 |
T |
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