View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6365_high_43 (Length: 240)
Name: NF6365_high_43
Description: NF6365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6365_high_43 |
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Alignment Details
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 35290126 - 35289903
Alignment:
| Q |
1 |
tattaagttctagtattctcttggagaagaaaatgaataggcttaataaggtacagctatcattagagaatatgctgtgtttattttttaaacagtgcga |
100 |
Q |
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|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35290126 |
tattaaattctagtattttcttggagaagaaaatgaataggcttaataaggtacagctatcattagagaatatgctgtgtttattttttaaacagtgcga |
35290027 |
T |
|
| Q |
101 |
tggttacatagaaaatgaatgaggaaaaaacaagttttagccagagagagacagagagtcatggtgttggaacttggaatgatcatgatgcaaaggggtc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
35290026 |
tggttacatagaaaatgaatgaggaaaaaacaagttttagccagagagagacagagagtcatggtgttggaacttggtatgatcatgatgcaaaggggtc |
35289927 |
T |
|
| Q |
201 |
ccacaaggaagaataacttgttta |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
35289926 |
ccacaaggaagaataacttgttta |
35289903 |
T |
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