View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6365_low_19 (Length: 424)

Name: NF6365_low_19
Description: NF6365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6365_low_19
NF6365_low_19
[»] chr6 (45 HSPs)
chr6 (11-405)||(12627482-12627893)
chr6 (266-352)||(21924910-21924996)
chr6 (275-367)||(9025449-9025546)
chr6 (218-315)||(9658831-9658926)
chr6 (275-332)||(7265588-7265645)
chr6 (261-327)||(26562682-26562748)
chr6 (275-332)||(19040359-19040416)
chr6 (275-367)||(7938123-7938215)
chr6 (219-319)||(20371118-20371218)
chr6 (260-319)||(9195762-9195821)
chr6 (276-326)||(5462694-5462744)
chr6 (275-329)||(32511664-32511718)
chr6 (275-332)||(7377986-7378043)
chr6 (219-316)||(7996389-7996485)
chr6 (219-316)||(8022316-8022412)
chr6 (275-332)||(13851743-13851800)
chr6 (276-332)||(31579222-31579276)
chr6 (276-332)||(5732505-5732561)
chr6 (275-319)||(7086802-7086846)
chr6 (275-327)||(7151419-7151471)
chr6 (248-332)||(8776968-8777052)
chr6 (275-319)||(30866152-30866196)
chr6 (248-332)||(34595114-34595198)
chr6 (16-87)||(4859114-4859185)
chr6 (40-87)||(9024177-9024224)
chr6 (248-319)||(9027158-9027229)
chr6 (276-319)||(9617442-9617485)
chr6 (277-328)||(9629392-9629443)
chr6 (284-319)||(11591878-11591913)
chr6 (28-75)||(13689206-13689253)
chr6 (261-332)||(33001284-33001355)
chr6 (275-321)||(7248365-7248411)
chr6 (248-310)||(9107387-9107449)
chr6 (217-310)||(12696275-12696366)
chr6 (279-317)||(13360382-13360420)
chr6 (278-332)||(13364700-13364754)
chr6 (35-73)||(27661742-27661780)
chr6 (276-321)||(7569174-7569219)
chr6 (254-327)||(8931602-8931675)
chr6 (40-73)||(26650240-26650273)
chr6 (40-73)||(26756208-26756241)
chr6 (275-316)||(34073358-34073399)
chr6 (275-319)||(10842539-10842583)
chr6 (275-319)||(19044471-19044515)
chr6 (275-319)||(26178689-26178733)
[»] chr1 (54 HSPs)
chr1 (275-366)||(12443422-12443512)
chr1 (260-367)||(13436450-13436558)
chr1 (219-319)||(17831539-17831638)
chr1 (275-319)||(20157358-20157402)
chr1 (247-319)||(34712391-34712463)
chr1 (248-319)||(38503300-38503371)
chr1 (275-332)||(40181878-40181935)
chr1 (276-332)||(1864875-1864931)
chr1 (275-327)||(6427357-6427409)
chr1 (275-319)||(7918219-7918263)
chr1 (11-86)||(14332391-14332465)
chr1 (286-333)||(30749858-30749905)
chr1 (286-333)||(30771309-30771356)
chr1 (27-93)||(19637766-19637832)
chr1 (248-310)||(34298416-34298478)
chr1 (275-321)||(36906004-36906050)
chr1 (246-332)||(52903227-52903313)
chr1 (275-332)||(9709827-9709884)
chr1 (275-332)||(14332637-14332694)
chr1 (278-319)||(25098563-25098604)
chr1 (278-319)||(25361896-25361937)
chr1 (275-367)||(25452110-25452200)
chr1 (261-326)||(27471567-27471632)
chr1 (275-332)||(36878468-36878525)
chr1 (276-321)||(42325568-42325613)
chr1 (278-319)||(44482240-44482281)
chr1 (275-319)||(10233260-10233304)
chr1 (278-318)||(19324572-19324612)
chr1 (275-319)||(34371721-34371764)
chr1 (275-331)||(38075966-38076022)
chr1 (275-327)||(40285654-40285706)
chr1 (248-319)||(398773-398844)
chr1 (249-308)||(2896140-2896199)
chr1 (275-310)||(31015050-31015085)
chr1 (248-310)||(5376517-5376579)
chr1 (21-75)||(7988464-7988518)
chr1 (261-319)||(19562629-19562687)
chr1 (59-93)||(22416469-22416503)
chr1 (275-329)||(35999320-35999374)
chr1 (276-367)||(2288129-2288218)
chr1 (213-310)||(3490407-3490503)
chr1 (275-316)||(5898277-5898318)
chr1 (219-332)||(22881611-22881723)
chr1 (219-332)||(38078656-38078769)
chr1 (26-83)||(39828268-39828325)
chr1 (275-332)||(39953141-39953198)
chr1 (275-319)||(1486717-1486761)
chr1 (15-71)||(5376517-5376573)
chr1 (275-319)||(9828051-9828095)
chr1 (275-319)||(10572597-10572641)
chr1 (287-319)||(17705594-17705626)
chr1 (248-332)||(23636044-23636128)
chr1 (275-311)||(26238128-26238164)
chr1 (276-332)||(28674808-28674864)
[»] chr8 (36 HSPs)
chr8 (275-332)||(34897092-34897149)
chr8 (261-332)||(13844591-13844662)
chr8 (218-329)||(4786336-4786446)
chr8 (261-367)||(27213540-27213640)
chr8 (261-332)||(31236572-31236643)
chr8 (26-107)||(1676709-1676789)
chr8 (275-332)||(3025558-3025615)
chr8 (275-348)||(4948659-4948731)
chr8 (276-321)||(11803267-11803312)
chr8 (40-93)||(12985403-12985456)
chr8 (276-332)||(12985400-12985456)
chr8 (275-315)||(14134706-14134746)
chr8 (275-319)||(14731719-14731763)
chr8 (275-319)||(24362210-24362254)
chr8 (262-317)||(4611528-4611583)
chr8 (276-319)||(11927094-11927137)
chr8 (276-335)||(18646180-18646239)
chr8 (275-310)||(37283827-37283862)
chr8 (275-318)||(39954288-39954331)
chr8 (248-330)||(926785-926867)
chr8 (276-330)||(31580124-31580178)
chr8 (22-76)||(37225755-37225809)
chr8 (286-332)||(38079017-38079063)
chr8 (35-76)||(3508058-3508099)
chr8 (261-326)||(12559107-12559171)
chr8 (274-319)||(20679403-20679448)
chr8 (286-319)||(26902183-26902216)
chr8 (248-321)||(36934650-36934723)
chr8 (277-310)||(40332200-40332233)
chr8 (275-315)||(7658470-7658510)
chr8 (259-319)||(11944656-11944716)
chr8 (275-319)||(12606837-12606881)
chr8 (275-315)||(13203648-13203688)
chr8 (275-307)||(18067954-18067986)
chr8 (30-82)||(26466554-26466606)
chr8 (248-332)||(36450749-36450833)
[»] chr5 (31 HSPs)
chr5 (275-332)||(34879357-34879414)
chr5 (275-332)||(30502383-30502440)
chr5 (275-332)||(30542726-30542783)
chr5 (275-319)||(6471897-6471941)
chr5 (276-332)||(28588669-28588725)
chr5 (275-327)||(41091257-41091309)
chr5 (275-367)||(6247629-6247725)
chr5 (276-333)||(17925166-17925223)
chr5 (275-332)||(21576740-21576797)
chr5 (40-73)||(28136676-28136709)
chr5 (275-319)||(3966510-3966554)
chr5 (246-333)||(2548366-2548452)
chr5 (28-75)||(18607110-18607157)
chr5 (279-318)||(24273039-24273078)
chr5 (279-318)||(24389136-24389175)
chr5 (261-316)||(35017030-35017085)
chr5 (275-321)||(17593728-17593774)
chr5 (278-332)||(18421836-18421890)
chr5 (246-319)||(19168829-19168902)
chr5 (275-332)||(21191051-21191108)
chr5 (279-332)||(21194200-21194253)
chr5 (284-325)||(23015991-23016032)
chr5 (286-319)||(39758290-39758323)
chr5 (279-367)||(6326257-6326345)
chr5 (248-308)||(6770523-6770583)
chr5 (288-332)||(14422922-14422966)
chr5 (246-310)||(14674247-14674311)
chr5 (278-310)||(19438353-19438385)
chr5 (275-319)||(27144470-27144514)
chr5 (275-327)||(39205887-39205939)
chr5 (30-86)||(43208276-43208332)
[»] chr2 (36 HSPs)
chr2 (219-319)||(23717979-23718077)
chr2 (219-319)||(24105651-24105749)
chr2 (219-310)||(21374716-21374807)
chr2 (275-332)||(5367199-5367256)
chr2 (26-87)||(31026692-31026753)
chr2 (275-332)||(37411239-37411296)
chr2 (275-319)||(21616769-21616813)
chr2 (7-89)||(37402083-37402166)
chr2 (25-87)||(18570968-18571030)
chr2 (286-332)||(20242722-20242768)
chr2 (47-104)||(896229-896286)
chr2 (261-310)||(21782835-21782884)
chr2 (275-332)||(34691800-34691857)
chr2 (275-332)||(34714212-34714269)
chr2 (276-332)||(5473336-5473392)
chr2 (275-319)||(18889599-18889643)
chr2 (275-327)||(29970549-29970601)
chr2 (261-349)||(42832254-42832342)
chr2 (275-319)||(44860327-44860371)
chr2 (276-339)||(12748692-12748754)
chr2 (284-319)||(32749833-32749868)
chr2 (276-319)||(35449521-35449564)
chr2 (276-319)||(39279683-39279726)
chr2 (276-334)||(23921261-23921319)
chr2 (275-317)||(28677916-28677958)
chr2 (26-107)||(30298430-30298509)
chr2 (261-319)||(31808070-31808128)
chr2 (276-317)||(36281693-36281734)
chr2 (261-333)||(896204-896276)
chr2 (276-308)||(2331802-2331834)
chr2 (30-86)||(16630796-16630852)
chr2 (275-319)||(18276528-18276572)
chr2 (275-327)||(18622613-18622665)
chr2 (271-319)||(30471041-30471089)
chr2 (275-327)||(30717530-30717582)
chr2 (27-103)||(37497118-37497194)
[»] scaffold0020 (1 HSPs)
scaffold0020 (260-319)||(135320-135379)
[»] chr7 (40 HSPs)
chr7 (261-332)||(20549784-20549855)
chr7 (249-310)||(29787386-29787447)
chr7 (275-319)||(22868049-22868093)
chr7 (275-332)||(3721100-3721157)
chr7 (275-332)||(25481909-25481966)
chr7 (275-327)||(6630912-6630964)
chr7 (278-330)||(9482944-9482996)
chr7 (279-327)||(17307904-17307952)
chr7 (275-319)||(17851438-17851482)
chr7 (275-331)||(32287459-32287515)
chr7 (275-319)||(32308127-32308171)
chr7 (275-310)||(2424621-2424656)
chr7 (30-117)||(12278836-12278922)
chr7 (248-319)||(19206030-19206101)
chr7 (284-319)||(22602718-22602753)
chr7 (276-327)||(35297672-35297723)
chr7 (22-81)||(38134413-38134472)
chr7 (29-87)||(3095433-3095491)
chr7 (276-318)||(16341504-16341546)
chr7 (286-332)||(18213028-18213074)
chr7 (254-332)||(21826259-21826337)
chr7 (18-88)||(23948381-23948451)
chr7 (248-310)||(27945021-27945083)
chr7 (275-349)||(28155577-28155651)
chr7 (286-332)||(39138462-39138508)
chr7 (40-93)||(4909162-4909215)
chr7 (276-321)||(5233637-5233682)
chr7 (278-319)||(5548686-5548727)
chr7 (276-333)||(12278843-12278899)
chr7 (275-332)||(21880159-21880216)
chr7 (275-332)||(26733311-26733368)
chr7 (277-310)||(30731046-30731079)
chr7 (275-319)||(5835254-5835298)
chr7 (248-308)||(8842354-8842414)
chr7 (275-319)||(19992008-19992052)
chr7 (316-356)||(23746967-23747007)
chr7 (27-75)||(23930217-23930265)
chr7 (40-76)||(36314639-36314675)
chr7 (276-332)||(38143231-38143287)
chr7 (22-70)||(41360903-41360951)
[»] chr3 (37 HSPs)
chr3 (276-327)||(16192750-16192801)
chr3 (275-332)||(7928457-7928514)
chr3 (263-320)||(11313807-11313864)
chr3 (275-316)||(11493372-11493413)
chr3 (275-332)||(45451560-45451617)
chr3 (248-332)||(8383237-8383321)
chr3 (248-332)||(25093482-25093566)
chr3 (261-332)||(8789545-8789616)
chr3 (246-325)||(29508422-29508501)
chr3 (286-356)||(13414487-13414557)
chr3 (246-327)||(25948887-25948968)
chr3 (40-81)||(45382754-45382795)
chr3 (275-332)||(49505149-49505206)
chr3 (275-327)||(3164025-3164077)
chr3 (284-332)||(6780414-6780462)
chr3 (275-315)||(10690274-10690314)
chr3 (274-318)||(14618787-14618831)
chr3 (15-87)||(19323449-19323521)
chr3 (276-332)||(20691327-20691383)
chr3 (288-332)||(40993330-40993374)
chr3 (241-332)||(10954925-10955016)
chr3 (275-310)||(11251985-11252020)
chr3 (276-319)||(32804548-32804591)
chr3 (275-325)||(1438811-1438861)
chr3 (280-318)||(4704301-4704339)
chr3 (275-317)||(12704014-12704056)
chr3 (15-73)||(28590859-28590917)
chr3 (322-367)||(8789492-8789537)
chr3 (275-316)||(9624648-9624689)
chr3 (286-331)||(35222956-35223001)
chr3 (35-92)||(40150567-40150624)
chr3 (275-319)||(8039843-8039887)
chr3 (275-327)||(10455797-10455849)
chr3 (248-300)||(12674528-12674580)
chr3 (279-327)||(15314876-15314924)
chr3 (40-80)||(21419463-21419503)
chr3 (275-319)||(34307788-34307832)
[»] chr4 (30 HSPs)
chr4 (275-320)||(36635331-36635376)
chr4 (271-373)||(17425345-17425445)
chr4 (276-367)||(22440561-22440651)
chr4 (276-317)||(903930-903971)
chr4 (22-75)||(5654604-5654657)
chr4 (275-332)||(8423713-8423770)
chr4 (275-328)||(15029772-15029825)
chr4 (29-86)||(18513243-18513300)
chr4 (275-332)||(54580018-54580075)
chr4 (284-352)||(10499246-10499313)
chr4 (278-326)||(18576038-18576086)
chr4 (275-319)||(40613457-40613501)
chr4 (29-81)||(43300616-43300668)
chr4 (277-321)||(46180942-46180986)
chr4 (276-319)||(5775366-5775409)
chr4 (29-76)||(43299983-43300030)
chr4 (248-318)||(13783261-13783331)
chr4 (275-333)||(33950143-33950201)
chr4 (22-75)||(10546141-10546194)
chr4 (286-327)||(13134468-13134509)
chr4 (275-332)||(16189716-16189773)
chr4 (276-321)||(20743284-20743329)
chr4 (40-97)||(33950147-33950204)
chr4 (275-319)||(6933282-6933326)
chr4 (277-317)||(9996849-9996889)
chr4 (248-332)||(23292981-23293065)
chr4 (271-319)||(30103365-30103412)
chr4 (288-332)||(40179631-40179675)
chr4 (284-331)||(42014974-42015022)
chr4 (276-332)||(48139272-48139328)
[»] scaffold0022 (2 HSPs)
scaffold0022 (22-76)||(99886-99940)
scaffold0022 (276-332)||(90851-90907)
[»] scaffold0199 (1 HSPs)
scaffold0199 (26-107)||(1946-2026)
[»] scaffold0123 (1 HSPs)
scaffold0123 (275-319)||(44533-44577)
[»] scaffold0036 (1 HSPs)
scaffold0036 (275-319)||(9755-9799)
[»] scaffold0306 (1 HSPs)
scaffold0306 (248-306)||(13380-13438)
[»] scaffold0223 (1 HSPs)
scaffold0223 (248-310)||(20152-20214)
[»] scaffold0152 (1 HSPs)
scaffold0152 (248-306)||(21889-21947)
[»] scaffold0103 (1 HSPs)
scaffold0103 (248-310)||(51791-51853)
[»] scaffold0044 (1 HSPs)
scaffold0044 (277-319)||(53189-53231)
[»] scaffold0050 (1 HSPs)
scaffold0050 (276-332)||(70286-70342)
[»] scaffold0018 (1 HSPs)
scaffold0018 (15-59)||(192075-192119)
[»] scaffold0008 (1 HSPs)
scaffold0008 (275-319)||(263380-263424)


Alignment Details
Target: chr6 (Bit Score: 311; Significance: 1e-175; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 11 - 405
Target Start/End: Complemental strand, 12627893 - 12627482
Alignment:
Q  11 cacagacactaacatgtcgacacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtcagtgtctgacaccaacacatgtctgaaac 110  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  12627893 cacaaacactaacacgtcgacacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtcgatgtctgacaccaacacatgtctgaaac 12627794  T
Q  111 tgggacatgccaaataaaaggagtgtccatgctccacatcaacctatatcaaagattacaacactacaaccacaaaaatgaatcttgataacaacattcc 210  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12627793 tgggacatgcctaataagaggagtgtccatgctccacatcaacctatatcaaagattacaacactacaaccacaaaaatgaatcatgataacaacattcc 12627694  T
Q  211 catatttaatgaagcacatatacagacacagacaccagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaat 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12627693 catatttaatgaagcacatatacagacacagacaccagacacggacagtaacacaccgaaactcctaataatgtgaaaaaatcacataattcagtgtaat 12627594  T
Q  311 aatatgtgttgatgtcgga----------------caccgagacactcctaatccgagaagtatcagtgc-ttcgtattaaaacactttgattaattacg 393  Q
    ||||||||| |||||||||                ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  12627593 aatatgtgtcgatgtcggacaccacacatgtccgacaccgagacactcctaatccgagaaatatcagtgctttcgtattaaaacactttgattaattacg 12627494  T
Q  394 aaacttagaatt 405  Q
    ||||||||||||    
T  12627493 aaacttagaatt 12627482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 266 - 352
Target Start/End: Complemental strand, 21924996 - 21924910
Alignment:
Q  266 ccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacaccgagacactcctaatccgag 352  Q
    |||| ||| |||||||| |||||| |||| ||||||||||||||| |||||||| | |||||||||||| ||||| |||||||||||    
T  21924996 ccgacactgctaataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgtcggacaccgggacacgcctaatccgag 21924910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 275 - 367
Target Start/End: Complemental strand, 9025546 - 9025449
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcg-----gacaccgagacactcctaatccgagaagtatcagtgcttc 367  Q
    |||||||| ||||||||||||||||||||||||||| |||||||| | |||||     ||||||| ||||| ||||||||||||||| || |||||||    
T  9025546 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttc 9025449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 315
Target Start/End: Original strand, 9658831 - 9658926
Alignment:
Q  218 aatgaagcacatatacagacacagacaccagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatat 315  Q
    ||||||||||  ||||||||||||||||  |||||||||| | |||| |||| ||  |||||||| | ||||||||||||||||||||||||| ||||    
T  9658831 aatgaagcacggatacagacacagacac--gacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatat 9658926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 7265645 - 7265588
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| ||||||||||||||||||||||||||| |||||||| | ||||||||||    
T  7265645 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 7265588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 327
Target Start/End: Original strand, 26562682 - 26562748
Alignment:
Q  261 acacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcg 327  Q
    |||| |||| ||| |||| ||| ||||||||||||||||||||||||||| |||||||| |||||||    
T  26562682 acacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcg 26562748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 19040359 - 19040416
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||   ||||||||||    
T  19040359 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcggacac 19040416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 367
Target Start/End: Original strand, 7938123 - 7938215
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacaccgagacactcctaatccgagaagtatcagtgcttc 367  Q
    |||||||| ||| ||||||| |||||| |||||||| ||| |||| | |||| ||||||||||||| ||| ||||||| ||| || |||||||    
T  7938123 ctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtccgacaccgagacacgcctgatccgaggagtgtccgtgcttc 7938215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 319
Target Start/End: Complemental strand, 20371218 - 20371118
Alignment:
Q  219 atgaagcacatatacagacacagacaccagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtg 318  Q
    |||||||||  |||| |||||||| ||| |||||||||| | |||| |||| ||  |||||||| |||||||||||||||| ||| ||| || |||||||    
T  20371218 atgaagcacggatacggacacagaaaccggacacggacattgacacgccgacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtg 20371119  T
Q  319 t 319  Q
    |    
T  20371118 t 20371118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 9195821 - 9195762
Alignment:
Q  260 aacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||| ||| |||||||||||| ||||||||| |||||||| |||||||| ||||||||    
T  9195821 aacacatcgacactcctaataatttgagaaaatgacataatttagtgtaattatatgtgt 9195762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 5462694 - 5462744
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtc 326  Q
    ||||||| |||||||||||||||||||| |||||| |||| ||||||||||    
T  5462694 taataatttgagaaaatcacataattcattgtaattatatatgttgatgtc 5462744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 329
Target Start/End: Complemental strand, 32511718 - 32511664
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcgga 329  Q
    |||||||| | ||||||||||||||||||||||||| ||| |||||| |||||||    
T  32511718 ctaataatttaagaaaatcacataattcagtgtaattataagtgttggtgtcgga 32511664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 7377986 - 7378043
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||| ||| |||||||||||||||||||| |||||| |||||||| | ||||||||||    
T  7377986 ctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacac 7378043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 316
Target Start/End: Complemental strand, 7996485 - 7996389
Alignment:
Q  219 atgaagcacatatacagacacagacaccagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatg 316  Q
    |||||||||| ||||||||||||  ||  |||| ||||| | |||  |||| ||| |||||||| ||||||||||| ||||||||||||||| |||||    
T  7996485 atgaagcacagatacagacacagt-acatgacaaggacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatg 7996389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 316
Target Start/End: Original strand, 8022316 - 8022412
Alignment:
Q  219 atgaagcacatatacagacacagacaccagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatg 316  Q
    |||||||||| ||||||||||||  ||  |||| ||||| | |||  |||| ||| |||||||| ||||||||||| ||||||||||||||| |||||    
T  8022316 atgaagcacagatacagacacagt-acatgacaaggacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatg 8022412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 13851743 - 13851800
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| ||||||||| || |||||||||||||| |||||||| |||||| |||||    
T  13851743 ctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 13851800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 31579276 - 31579222
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||||| |||||||||||||||||||||||||||  ||||||| | ||||||||||    
T  31579276 taataatttgagaaaatcacataattcagtgtaat--tatgtgtcggtgtcggacac 31579222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 5732561 - 5732505
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||||| ||||||||||||||| || |||||||| |||||||| | ||||||||||    
T  5732561 taataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgtcggacac 5732505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 7086802 - 7086846
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| |||||||||||||||||| |||||||| ||||||||    
T  7086802 ctaataatttgagaaaatcacataatttagtgtaattatatgtgt 7086846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 7151419 - 7151471
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcg 327  Q
    |||||||| ||| |||||||||||||| |||||||| |||||||||| |||||    
T  7151419 ctaataatttgaaaaaatcacataattaagtgtaattatatgtgttggtgtcg 7151471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 332
Target Start/End: Complemental strand, 8777052 - 8776968
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||||| | |||| |||| ||  |||||||| ||| ||||||||| ||||||||||||| | | |||||| ||||||||||    
T  8777052 gacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcggacac 8776968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 30866196 - 30866152
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| |||||||||||||||||||| |||||| ||||||||    
T  30866196 ctaataatttgagaaaatcacataattcaatgtaattatatgtgt 30866152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 332
Target Start/End: Original strand, 34595114 - 34595198
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||||| | |||| |||| ||  |||||||| ||| ||||||||||||||||||||||| | | |||| | ||||||||||    
T  34595114 gacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 34595198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 4859185 - 4859114
Alignment:
Q  16 acactaacatgtcgacacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtcagtgtc 87  Q
    ||||||||||||||||||  ||| |||||| ||||||| ||||| | ||||||||||| |  ||||||||||    
T  4859185 acactaacatgtcgacaccaataataatttgagaaaatgacataatccaatgtaatcacacgtgtcagtgtc 4859114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 9024224 - 9024177
Alignment:
Q  40 taatttaagaaaataacatatttcaatgtaatcatatatgtcagtgtc 87  Q
    |||||| ||||||| ||||| |||||||||||||||| ||||||||||    
T  9024224 taatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtc 9024177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 9027158 - 9027229
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||||| | |||| |||| ||  |||||||| ||||| ||||||||||||| ||||||| ||||||||    
T  9027158 gacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgt 9027229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 319
Target Start/End: Original strand, 9617442 - 9617485
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    ||||||| |||||||||||||||||||| |||||| ||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgt 9617485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 328
Target Start/End: Original strand, 9629392 - 9629443
Alignment:
Q  277 aataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcgg 328  Q
    |||||| |||||||||||||||||||| |||||| |||||||| | ||||||    
T  9629392 aataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcgg 9629443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 319
Target Start/End: Complemental strand, 11591913 - 11591878
Alignment:
Q  284 tgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    ||||||||||||||||||||||||||| ||||||||    
T  11591913 tgagaaaatcacataattcagtgtaattatatgtgt 11591878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 13689253 - 13689206
Alignment:
Q  28 cgacacggatactaatttaagaaaataacatatttcaatgtaatcata 75  Q
    |||||| |||| |||||| ||||||||||| |||||||||||||||||    
T  13689253 cgacacagataataatttgagaaaataacaaatttcaatgtaatcata 13689206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 332
Target Start/End: Complemental strand, 33001355 - 33001284
Alignment:
Q  261 acacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||| |||| ||| |||||||| ||| |||||||||||||| | |||||| |||||||| | ||||||||||    
T  33001355 acacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcggacac 33001284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 7248365 - 7248411
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttg 321  Q
    |||||||| |||| |||||||||||||||| ||||| ||||||||||    
T  7248365 ctaataatctgaggaaatcacataattcagggtaattatatgtgttg 7248411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 310
Target Start/End: Complemental strand, 9107449 - 9107387
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaat 310  Q
    |||||||||| |||||| |||| ||  |||||||| ||| ||||||||| |||||||||||||    
T  9107449 gacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaat 9107387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 310
Target Start/End: Original strand, 12696275 - 12696366
Alignment:
Q  217 taatgaagcacatatacagacacagacaccagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaat 310  Q
    |||||||||||  |||| ||||| |||||  |||||||||| | |||| |||| ||  |||||||| ||| ||||| |||||||||||||||||    
T  12696275 taatgaagcacggatacggacacggacac--gacacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaat 12696366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 13360420 - 13360382
Alignment:
Q  279 taatgtgagaaaatcacataattcagtgtaataatatgt 317  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  13360420 taatttgagaaaatcacataattcagtgtaattatatgt 13360382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 13364754 - 13364700
Alignment:
Q  278 ataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||| ||||||||||| ||||||||||||||| |||||||| | ||| ||||||    
T  13364754 ataatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgttggacac 13364700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 27661742 - 27661780
Alignment:
Q  35 gatactaatttaagaaaataacatatttcaatgtaatca 73  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  27661742 gatagtaatttaagaaaataatatatttcaatgtaatca 27661780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 7569219 - 7569174
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttg 321  Q
    ||||||| ||||||||| ||||||||||||||||| ||| ||||||    
T  7569219 taataatttgagaaaattacataattcagtgtaattataggtgttg 7569174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 8931675 - 8931602
Alignment:
Q  254 gacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcg 327  Q
    ||||| ||||| |||| ||  |||| ||| ||||||||| |||||||||||| |||| |||||||| |||||||    
T  8931675 gacagaaacacgccgacacagctaaaaatttgagaaaataacataattcagtataattatatgtgtcgatgtcg 8931602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 26650273 - 26650240
Alignment:
Q  40 taatttaagaaaataacatatttcaatgtaatca 73  Q
    ||||||||||||||||||||||| ||||||||||    
T  26650273 taatttaagaaaataacatatttgaatgtaatca 26650240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 26756241 - 26756208
Alignment:
Q  40 taatttaagaaaataacatatttcaatgtaatca 73  Q
    ||||||||||||||||||||||| ||||||||||    
T  26756241 taatttaagaaaataacatatttgaatgtaatca 26756208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 34073399 - 34073358
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatg 316  Q
    |||||||| |||||||||| |||||||||||||||| |||||    
T  34073399 ctaataatttgagaaaatctcataattcagtgtaattatatg 34073358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 10842539 - 10842583
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| ||| |||||||||||||| |||||||| ||||||||    
T  10842539 ctaataatttgaaaaaatcacataatttagtgtaatcatatgtgt 10842583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 19044471 - 19044515
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| |||||| ||||||||||||||||| || ||||||||    
T  19044471 ctaataatttgagaatatcacataattcagtgttattatatgtgt 19044515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 26178733 - 26178689
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| ||| |||||||||||||| |||||||| ||||||||    
T  26178733 ctaataatttgataaaatcacataatttagtgtaatcatatgtgt 26178689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 3e-18; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 366
Target Start/End: Complemental strand, 12443512 - 12443422
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacaccgagacactcctaatccgagaagtatcagtgctt 366  Q
    |||||||| |||||||||||||||||||||||||||  ||||||  | |||||||||||||||||| |||||||||||  ||||| ||||||    
T  12443512 ctaataatttgagaaaatcacataattcagtgtaattgtatgtgacg-tgtcggacaccgagacacacctaatccgaggggtatccgtgctt 12443422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 367
Target Start/End: Original strand, 13436450 - 13436558
Alignment:
Q  260 aacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacaccgag-acactcctaatccgagaagtat 358  Q
    ||||| |||| ||| |||||||| | || |||||||||||||||||||||| |||||||||| ||||||||||  || ||||  |||||||||||||| |    
T  13436450 aacacgccgacactgctaataatttaaggaaatcacataattcagtgtaattatatgtgttggtgtcggacacgtagaacacgactaatccgagaagtgt 13436549  T
Q  359 cagtgcttc 367  Q
    | |||||||    
T  13436550 ccgtgcttc 13436558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 319
Target Start/End: Complemental strand, 17831638 - 17831539
Alignment:
Q  219 atgaagcacatatacagacacagacaccagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtg 318  Q
    |||||||||  ||||||||||||||||| || ||| ||| | |||| |||| ||  |||||||| |||||||||||||| |||||||||||| |||||||    
T  17831638 atgaagcacggatacagacacagacaccggatacg-acactgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtg 17831540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 20157402 - 20157358
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  20157402 ctaataatgtgagaaaatcacataattcagtgtaatcatatgtgt 20157358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 319
Target Start/End: Complemental strand, 34712463 - 34712391
Alignment:
Q  247 agacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    ||||||||||| ||||||||||  ||| |||||||| ||||||||| |||||||| |||||||| ||||||||    
T  34712463 agacacggacattaacacaccgtcactgctaataatttgagaaaataacataatttagtgtaattatatgtgt 34712391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 38503300 - 38503371
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||||| ||||||||||| ||  |||||||| ||||||||||| ||| ||||||||||| ||||||||    
T  38503300 gacacggacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgt 38503371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 40181878 - 40181935
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| ||||||||||||||||||||||||||| |||||| | | ||||||||||    
T  40181878 ctaataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcggacac 40181935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 1864931 - 1864875
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||||| ||||||||||||||||||||||||||| |||||||| | ||| ||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgttggacac 1864875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 6427357 - 6427409
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcg 327  Q
    |||||||| |||||||||||||||||||| |||||| |||||||||| |||||    
T  6427357 ctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcg 6427409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 7918263 - 7918219
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  7918263 ctaataatttgagaaaatcacataattcagtgtaattatatgtgt 7918219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 14332391 - 14332465
Alignment:
Q  11 cacagacactaacatgtcgacacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtcagtgt 86  Q
    |||||||||||||| |||||||| ||||  ||||| ||||||| ||||| ||||||||||||| ||||||| ||||    
T  14332391 cacagacactaacaagtcgacaccgataa-aatttgagaaaatgacataattcaatgtaatcacatatgtcggtgt 14332465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 30749858 - 30749905
Alignment:
Q  286 agaaaatcacataattcagtgtaataatatgtgttgatgtcggacacc 333  Q
    ||||||||||||||||||||||||| |||||||| | |||||||||||    
T  30749858 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacc 30749905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 30771309 - 30771356
Alignment:
Q  286 agaaaatcacataattcagtgtaataatatgtgttgatgtcggacacc 333  Q
    ||||||||||||||||||||||||| |||||||| | |||||||||||    
T  30771309 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacc 30771356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 19637766 - 19637832
Alignment:
Q  27 tcgacacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtcagtgtctgacac 93  Q
    ||||||| |||| |||||||||||||| ||||  |||||||||||||||| |||| ||||| |||||    
T  19637766 tcgacaccgataataatttaagaaaatgacattattcaatgtaatcatatgtgtcggtgtcggacac 19637832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 310
Target Start/End: Original strand, 34298416 - 34298478
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaat 310  Q
    |||||||| | | ||||||||| ||  |||||||| |||||||||||||||||||||||||||    
T  34298416 gacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaat 34298478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 36906004 - 36906050
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttg 321  Q
    |||||||| ||||||||||||||||||||| ||||| ||||||||||    
T  36906004 ctaataatctgagaaaatcacataattcagagtaattatatgtgttg 36906050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 332
Target Start/End: Original strand, 52903227 - 52903313
Alignment:
Q  246 cagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||||||| |||||| |||| ||   ||||||| | | ||||||| ||||||||||||||| |||||||| | ||||||||||    
T  52903227 cagacacggacactaacacgccgataccgttaataatttaataaaatcatataattcagtgtaattatatgtgtcggtgtcggacac 52903313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 9709827 - 9709884
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| |||||||||||||||||||  |||||| |||||||| | ||||||||||    
T  9709827 ctaataatttgagaaaatcacataattcgttgtaattatatgtgtcggtgtcggacac 9709884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 14332694 - 14332637
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| |||||||||||||||||| |||||||| |||||| | | ||||||||||    
T  14332694 ctaataatttgagaaaatcacataatttagtgtaattatatgtctcggtgtcggacac 14332637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 25098604 - 25098563
Alignment:
Q  278 ataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    ||||| ||||||||||||||||||||||||||| ||||||||    
T  25098604 ataatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 25361896 - 25361937
Alignment:
Q  278 ataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    ||||| ||||||||||||||||||||||||||| ||||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgt 25361937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 367
Target Start/End: Complemental strand, 25452200 - 25452110
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacaccgagacactcctaatccgagaagtatcagtgcttc 367  Q
    |||||||| |||||||||| ||||||||||||||||  ||||||| | |||| |||||||  |||| |||||| |||| ||| || |||||||    
T  25452200 ctaataatttgagaaaatctcataattcagtgtaat--tatgtgtcggtgtcagacaccggaacacgcctaattcgagcagtgtccgtgcttc 25452110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 326
Target Start/End: Complemental strand, 27471632 - 27471567
Alignment:
Q  261 acacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtc 326  Q
    ||||||||| ||  |||||||| |||||||| |||||||||||||||||| | |||||||| ||||    
T  27471632 acacaccgataccgctaataatttgagaaaagcacataattcagtgtaattacatgtgttggtgtc 27471567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 36878468 - 36878525
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||| | |||| |||||    
T  36878468 ctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtctgacac 36878525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 42325568 - 42325613
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttg 321  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||    
T  42325568 taataatttgagaaaatgacataattcagtgtaacaatatgtgttg 42325613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 44482240 - 44482281
Alignment:
Q  278 ataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    ||||| ||||||||||||||||||||||||||| ||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgt 44482281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 10233260 - 10233304
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||  ||||||||||||||||||||||||||| ||||||||    
T  10233260 ctaataaattgagaaaatcacataattcagtgtaattatatgtgt 10233304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 318
Target Start/End: Original strand, 19324572 - 19324612
Alignment:
Q  278 ataatgtgagaaaatcacataattcagtgtaataatatgtg 318  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  19324572 ataatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 34371721 - 34371764
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  34371721 ctaataat-tgagaaaatcacataattcagtgtaattatatgtgt 34371764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 331
Target Start/End: Complemental strand, 38076022 - 38075966
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggaca 331  Q
    |||||||| |||| ||||||||||| |||||||||| |||||||| | |||||||||    
T  38076022 ctaataatttgagtaaatcacataagtcagtgtaatcatatgtgtcggtgtcggaca 38075966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 40285706 - 40285654
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcg 327  Q
    |||||||| |||||||||| |||||||||||||| | |||||||| |||||||    
T  40285706 ctaataatttgagaaaatcgcataattcagtgtagtcatatgtgtcgatgtcg 40285654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 319
Target Start/End: Complemental strand, 398844 - 398773
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||||| | |||| |||| ||  |||||||| ||| ||||||||||||||||||||||| ||| ||||    
T  398844 gacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgt 398773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 308
Target Start/End: Complemental strand, 2896199 - 2896140
Alignment:
Q  249 acacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgta 308  Q
    ||||||||| | |||| |||| ||  |||||||| |||||||||||||||||||||||||    
T  2896199 acacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 310
Target Start/End: Original strand, 31015050 - 31015085
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaat 310  Q
    |||||||| |||||||||||||||||||||||||||    
T  31015050 ctaataatttgagaaaatcacataattcagtgtaat 31015085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 310
Target Start/End: Complemental strand, 5376579 - 5376517
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaat 310  Q
    |||||||||| |||||| |||| ||  |||||||| | ||||||| |||||||||||||||||    
T  5376579 gacacggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaat 5376517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 7988518 - 7988464
Alignment:
Q  21 aacatgtcgacacggatactaatttaagaaaataacatatttcaatgtaatcata 75  Q
    |||| |||||||| |||| |||||||||||| | ||||| |||||||||||||||    
T  7988518 aacacgtcgacactgataataatttaagaaagtgacataattcaatgtaatcata 7988464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 19562687 - 19562629
Alignment:
Q  261 acacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||| |||| ||| |||||||| |||||||||| |||| ||||||||||| ||||||||    
T  19562687 acacgccgacactgctaataatttgagaaaatctcatagttcagtgtaattatatgtgt 19562629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 93
Target Start/End: Complemental strand, 22416503 - 22416469
Alignment:
Q  59 atttcaatgtaatcatatatgtcagtgtctgacac 93  Q
    ||||||||||||||| |||||||||||||||||||    
T  22416503 atttcaatgtaatcacatatgtcagtgtctgacac 22416469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 329
Target Start/End: Complemental strand, 35999374 - 35999320
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcgga 329  Q
    |||||||| | ||||||||| |||||| ||| |||| ||||||||||||||||||    
T  35999374 ctaataatttaagaaaatcatataatttagtataattatatgtgttgatgtcgga 35999320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 367
Target Start/End: Complemental strand, 2288218 - 2288129
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacacc-gagacactcctaatccgagaagtatcagtgcttc 367  Q
    ||||||| | |||||||||||||||||| ||||||  ||||||| | ||||||||||| ||| ||| ||||||||||| | | ||||||||||    
T  2288218 taataatttaagaaaatcacataattcaatgtaat--tatgtgtcggtgtcggacacctgag-cacgcctaatccgaggaatgtcagtgcttc 2288129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 3490503 - 3490407
Alignment:
Q  213 tatttaatgaagcacatatacagacacagacaccagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaat 310  Q
    ||||| |||||||||  |||| || ||||||||| |||||| ||| | |||| |||| ||| |||||||| ||||||||  |||| ||||||||||||    
T  3490503 tattttatgaagcacggatacggatacagacaccggacacg-acactgacacgccgacactgctaataatttgagaaaactacattattcagtgtaat 3490407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 5898318 - 5898277
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatg 316  Q
    |||||||| ||| ||||||||||||||||||||||| |||||    
T  5898318 ctaataatctgaaaaaatcacataattcagtgtaattatatg 5898277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 332
Target Start/End: Complemental strand, 22881723 - 22881611
Alignment:
Q  219 atgaagcacatatacagacacagacaccagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtg 318  Q
    |||||||||  ||| |||||| |||||| |||||| ||| | |||| |||| ||  |||||||| ||| |||||||||||||| |||||||| | | |||    
T  22881723 atgaagcacggatatagacacggacaccggacacg-acactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtg 22881625  T
Q  319 ttgatgtcggacac 332  Q
    | | ||||||||||    
T  22881624 tcggtgtcggacac 22881611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 332
Target Start/End: Complemental strand, 38078769 - 38078656
Alignment:
Q  219 atgaagcacatatacagacacagacaccagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtg 318  Q
    |||||||||  |||| ||||| |||||| |||||| ||| | ||||  ||| ||  |||||||| ||| |||||||||||||||| |||||| | | |||    
T  38078769 atgaagcacggatacggacacggacaccggacacgaacactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtg 38078670  T
Q  319 ttgatgtcggacac 332  Q
    | | ||||||||||    
T  38078669 tcggtgtcggacac 38078656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 39828268 - 39828325
Alignment:
Q  26 gtcgacacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtcag 83  Q
    ||||||||  ||| |||||| ||||||||||||| || ||| ||||||||||||||||    
T  39828268 gtcgacaccaataataatttgagaaaataacatactttaatctaatcatatatgtcag 39828325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 39953198 - 39953141
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| | |||||||||||||||| ||||||||  ||||||| | ||||||||||    
T  39953198 ctaataattttagaaaatcacataatttagtgtaattgtatgtgtcggtgtcggacac 39953141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 1486761 - 1486717
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| ||| ||||||||||||||||||||||| ||| ||||    
T  1486761 ctaataatttgaaaaaatcacataattcagtgtaattataagtgt 1486717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 5376573 - 5376517
Alignment:
Q  15 gacactaacatgtcgacacggatactaatttaagaaaataacatatttcaatgtaat 71  Q
    |||||||||| | |||||| | || |||||||||||||||||||| |||| ||||||    
T  5376573 gacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaat 5376517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 9828051 - 9828095
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| ||| |||||||||||||||||||||||  |||||||    
T  9828051 ctaataatttgataaaatcacataattcagtgtaattttatgtgt 9828095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 10572641 - 10572597
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| ||||||||||||||||||| ||||||| | ||||||    
T  10572641 ctaataatttgagaaaatcacataattcggtgtaattaaatgtgt 10572597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 319
Target Start/End: Complemental strand, 17705626 - 17705594
Alignment:
Q  287 gaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||||||||||||||||||| ||||||||    
T  17705626 gaaaatcacataattcagtgtaattatatgtgt 17705594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 332
Target Start/End: Complemental strand, 23636128 - 23636044
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||||| | |||| |||||||  | || ||| ||||||||| |||||||||||||||||  ||||||| | |||| |||||    
T  23636128 gacacggacattgacacgccgaaaccgccaaaaatttgagaaaattacataattcagtgtaattgtatgtgtcggtgtcagacac 23636044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 311
Target Start/End: Complemental strand, 26238164 - 26238128
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaata 311  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  26238164 ctaataatttgagaaaataacataattcagtgtaata 26238128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 28674808 - 28674864
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||||| ||||||||| |||||||||||| |||| |||| ||||| |||| |||||    
T  28674808 taataatttgagaaaattacataattcagtataattatatatgttggtgtcagacac 28674864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 34897092 - 34897149
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  34897092 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcggacac 34897149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 332
Target Start/End: Complemental strand, 13844662 - 13844591
Alignment:
Q  261 acacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||| |||| ||| |||||||| |||||||||||||||||| |||||||| |||||||| | ||||||||||    
T  13844662 acacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcggacac 13844591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 329
Target Start/End: Complemental strand, 4786446 - 4786336
Alignment:
Q  218 aatgaagcacatatacagacacagacaccagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgt 317  Q
    ||||||||||  |||||||||| ||||||  ||||| ||| | |||| |||| ||   ||||||| | ||||||||||||||||||||||||| ||||||    
T  4786446 aatgaagcacggatacagacactgacaccgaacacg-acactgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgt 4786348  T
Q  318 gttgatgtcgga 329  Q
    || | |||||||    
T  4786347 gtcggtgtcgga 4786336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 367
Target Start/End: Original strand, 27213540 - 27213640
Alignment:
Q  261 acacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacaccgagacactcctaatccgagaagtatca 360  Q
    |||| |||| ||| |||||||| | |||||||||||||||||| |||||| |||||      |||||||||||| |||||  |||||||||||||| ||     
T  27213540 acacgccgacactgctaataatttcagaaaatcacataattcactgtaattatatg------tgtcggacaccgggacacggctaatccgagaagtgtcc 27213633  T
Q  361 gtgcttc 367  Q
    |||||||    
T  27213634 gtgcttc 27213640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 332
Target Start/End: Complemental strand, 31236643 - 31236572
Alignment:
Q  261 acacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||| |||| ||| |||||||| |||||||||||||||||||| |||||| |||||||| | || |||||||    
T  31236643 acacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgacggacac 31236572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 1676709 - 1676789
Alignment:
Q  26 gtcgacacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtcagtgtctgacaccaacacatgtctga 107  Q
    ||||||||||||| ||||||  |||||| |||||||| | ||||||||||  |||| ||||| |||||| ||||||||||||    
T  1676709 gtcgacacggataataatttgtgaaaatgacatattttagtgtaatcataggtgtc-gtgtcggacaccgacacatgtctga 1676789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 3025558 - 3025615
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||   ||||||||||    
T  3025558 ctaataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcggacac 3025615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 4948659 - 4948731
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacaccgagacactcctaatc 348  Q
    |||||||| ||| ||||||||||||||||||||||| | | |||| | ||||||||| |||||||| |||||||    
T  4948659 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggaca-cgagacacgcctaatc 4948731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 11803267 - 11803312
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttg 321  Q
    ||||||| | ||||||||||||||||||||||||| ||||||||||    
T  11803267 taataatttaagaaaatcacataattcagtgtaattatatgtgttg 11803312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 12985403 - 12985456
Alignment:
Q  40 taatttaagaaaataacatatttcaatgtaatcatatatgtcagtgtctgacac 93  Q
    |||||| ||||||| ||||| ||||||||||||||||||||| ||||| |||||    
T  12985403 taatttgagaaaatcacataattcaatgtaatcatatatgtcggtgtcggacac 12985456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 12985400 - 12985456
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||||| |||||||||||||||||||| |||||| |||| ||| | ||||||||||    
T  12985400 taataatttgagaaaatcacataattcaatgtaatcatatatgtcggtgtcggacac 12985456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 14134706 - 14134746
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatat 315  Q
    |||||||| ||||||||||||||||||||||||||| ||||    
T  14134706 ctaataatttgagaaaatcacataattcagtgtaattatat 14134746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 14731719 - 14731763
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| |||||||||||||||||| |||||||| ||||||||    
T  14731719 ctaataatttgagaaaatcacataatttagtgtaattatatgtgt 14731763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 24362254 - 24362210
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| ||||| ||||||||||||||||||||| ||||||||    
T  24362254 ctaataatttgagagaatcacataattcagtgtaattatatgtgt 24362210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 4611528 - 4611583
Alignment:
Q  262 cacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgt 317  Q
    |||||||| ||  |||||||| ||||||||| ||||||||||||||||| ||||||    
T  4611528 cacaccgacaccgctaataatttgagaaaataacataattcagtgtaattatatgt 4611583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 319
Target Start/End: Complemental strand, 11927137 - 11927094
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    ||||||| ||| ||||||||||||||||||||||| ||||||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtgt 11927094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 335
Target Start/End: Original strand, 18646180 - 18646239
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacaccga 335  Q
    ||||||| ||| ||||| |||| |||||||||||| |||| ||||| |||||||||||||    
T  18646180 taataatttgaaaaaatgacatgattcagtgtaatcatatatgttggtgtcggacaccga 18646239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 310
Target Start/End: Complemental strand, 37283862 - 37283827
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaat 310  Q
    |||||||| |||||||||||||||||||||||||||    
T  37283862 ctaataatctgagaaaatcacataattcagtgtaat 37283827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 318
Target Start/End: Complemental strand, 39954331 - 39954288
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtg 318  Q
    |||||||| |||||||||||||||||| |||||||| |||||||    
T  39954331 ctaataatttgagaaaatcacataatttagtgtaattatatgtg 39954288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 330
Target Start/End: Complemental strand, 926867 - 926785
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggac 330  Q
    |||||||||| | |||| || | |||||||||||| |||||||||| |||  ||||||||||| ||| |||| | ||||||||    
T  926867 gacacggacactgacacgccaacactcctaataatttgagaaaatctcattgttcagtgtaattataagtgtcggtgtcggac 926785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 31580178 - 31580124
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggac 330  Q
    ||||||| | |||||||||||||||| |||||||| ||| |||| ||||||||||    
T  31580178 taataatttaagaaaatcacataattgagtgtaattataggtgtcgatgtcggac 31580124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 37225809 - 37225755
Alignment:
Q  22 acatgtcgacacggatactaatttaagaaaataacatatttcaatgtaatcatat 76  Q
    ||||||| ||||  ||| |||||| ||||||||||||| ||||||||||||||||    
T  37225809 acatgtctacaccaataataatttgagaaaataacataattcaatgtaatcatat 37225755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 38079017 - 38079063
Alignment:
Q  286 agaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||||||| |||||||||||| ||||| || ||||||||||||    
T  38079017 agaaaatcacatgattcagtgtaattatatgcgtcgatgtcggacac 38079063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 3508058 - 3508099
Alignment:
Q  35 gatactaatttaagaaaataacatatttcaatgtaatcatat 76  Q
    |||| |||||| ||||||||||||| ||||||||||||||||    
T  3508058 gataataatttgagaaaataacataattcaatgtaatcatat 3508099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 326
Target Start/End: Complemental strand, 12559171 - 12559107
Alignment:
Q  261 acacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtc 326  Q
    ||||||||||| | |||||||| ||||||||| | ||||||||||||||| |||||| ||| ||||    
T  12559171 acacaccgaaa-tgctaataatttgagaaaatgatataattcagtgtaatcatatgtattggtgtc 12559107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 319
Target Start/End: Complemental strand, 20679448 - 20679403
Alignment:
Q  274 cctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    ||||||||| ||||||||||||||| ||||||||||| ||| ||||    
T  20679448 cctaataatttgagaaaatcacatagttcagtgtaattataagtgt 20679403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 26902216 - 26902183
Alignment:
Q  286 agaaaatcacataattcagtgtaataatatgtgt 319  Q
    ||||||||||||||||||||||||| ||||||||    
T  26902216 agaaaatcacataattcagtgtaattatatgtgt 26902183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 36934650 - 36934723
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttg 321  Q
    |||||||||| ||||||  ||| ||  ||||||||  || |||||||||||||||| |||||| ||||||||||    
T  36934650 gacacggacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaattatatgtgttg 36934723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 310
Target Start/End: Original strand, 40332200 - 40332233
Alignment:
Q  277 aataatgtgagaaaatcacataattcagtgtaat 310  Q
    |||||| |||||||||||||||||||||||||||    
T  40332200 aataatttgagaaaatcacataattcagtgtaat 40332233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 7658470 - 7658510
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatat 315  Q
    |||||||| ||||||||| ||||||||||||||||| ||||    
T  7658470 ctaataatttgagaaaattacataattcagtgtaattatat 7658510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 11944656 - 11944716
Alignment:
Q  259 taacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||| |||| |||  ||||||| ||| |||||||||||| |||||||||| ||||||||    
T  11944656 taacacgccgacactgttaataatttgataaaatcacataactcagtgtaattatatgtgt 11944716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 12606881 - 12606837
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| ||||||||||| |||||||| |||||| ||||||||    
T  12606881 ctaataatttgagaaaatcatataattcaatgtaattatatgtgt 12606837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 13203648 - 13203688
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatat 315  Q
    |||||||| ||||||||| ||||||||||||||||| ||||    
T  13203648 ctaataatttgagaaaattacataattcagtgtaattatat 13203688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 307
Target Start/End: Complemental strand, 18067986 - 18067954
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgt 307  Q
    |||||||| ||||||||||||||||||||||||    
T  18067986 ctaataatttgagaaaatcacataattcagtgt 18067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 26466606 - 26466554
Alignment:
Q  30 acacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtca 82  Q
    |||| |||| |||||| ||||||||| ||| ||||||| ||||||||||||||    
T  26466606 acaccgataataatttgagaaaataagataattcaatgcaatcatatatgtca 26466554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 332
Target Start/End: Complemental strand, 36450833 - 36450749
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||||| | |||| |||| ||  |||||||| ||| ||||||||| ||||||||||||| | | |||| | ||||||||||    
T  36450833 gacacggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcggacac 36450749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 34879357 - 34879414
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  34879357 ctaaaaatttgagaaaatcatataattcagtgtaataatatgtgtcgatgtcggacac 34879414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 30502440 - 30502383
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| |||||||||||| |||||||||||||| |||||||| | ||||||||||    
T  30502440 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacac 30502383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 30542783 - 30542726
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| |||||||||||| |||||||||||||| |||||||| | ||||||||||    
T  30542783 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacac 30542726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 6471941 - 6471897
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  6471941 ctaataatttgagaaaatcacataattcagtgtaattatatgtgt 6471897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 28588725 - 28588669
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||| | ||||||||||    
T  28588725 taataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcggacac 28588669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 41091309 - 41091257
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcg 327  Q
    ||||| || ||||||||||||||||||||||||||| |||||||| |||||||    
T  41091309 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcg 41091257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 275 - 367
Target Start/End: Original strand, 6247629 - 6247725
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac----cgagacactcctaatccgagaagtatcagtgcttc 367  Q
    |||||||| ||| ||||||||||||||||||||||| | | |||| | ||||||||||    || ||||| ||||||||||||||| || |||||||    
T  6247629 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacggcacgggacacacctaatccgagaagtgtctgtgcttc 6247725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 17925223 - 17925166
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacacc 333  Q
    ||||||| | |||||||||||||||||| ||||||||||||||| | ||||| |||||    
T  17925223 taataatttaagaaaatcacataattcaatgtaataatatgtgtcggtgtcgaacacc 17925166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 21576797 - 21576740
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| ||| ||||||||||||||||||||||| | | |||| ||||||||||||    
T  21576797 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcggacac 21576740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 28136676 - 28136709
Alignment:
Q  40 taatttaagaaaataacatatttcaatgtaatca 73  Q
    ||||||||||||||||||||||||||||||||||    
T  28136676 taatttaagaaaataacatatttcaatgtaatca 28136709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 3966510 - 3966554
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| ||||||||||||| ||||||||||||| ||||||||    
T  3966510 ctaataatttgagaaaatcacacaattcagtgtaattatatgtgt 3966554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 333
Target Start/End: Original strand, 2548366 - 2548452
Alignment:
Q  246 cagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacacc 333  Q
    |||||||||||| ||||||| | ||||   |||||||  |||||||| ||||||||||||||||| ||| |||| | |||||||||||    
T  2548366 cagacacggaca-taacacatcaaaaccgataataattagagaaaattacataattcagtgtaatcataagtgtcggtgtcggacacc 2548452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 18607157 - 18607110
Alignment:
Q  28 cgacacggatactaatttaagaaaataacatatttcaatgtaatcata 75  Q
    ||||| ||||| |||||| ||||||||||||| |||||||||||||||    
T  18607157 cgacatggataataatttgagaaaataacataattcaatgtaatcata 18607110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 318
Target Start/End: Complemental strand, 24273078 - 24273039
Alignment:
Q  279 taatgtgagaaaatcacataattcagtgtaataatatgtg 318  Q
    |||| ||||||||||||||||||||||||||| |||||||    
T  24273078 taatttgagaaaatcacataattcagtgtaattatatgtg 24273039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 318
Target Start/End: Original strand, 24389136 - 24389175
Alignment:
Q  279 taatgtgagaaaatcacataattcagtgtaataatatgtg 318  Q
    |||| ||||||||||||||||||||||||||| |||||||    
T  24389136 taatttgagaaaatcacataattcagtgtaattatatgtg 24389175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 35017030 - 35017085
Alignment:
Q  261 acacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatg 316  Q
    |||| |||||||  |||||||| |||||||||||||||||| |||||||| |||||    
T  35017030 acacgccgaaaccactaataatttgagaaaatcacataatttagtgtaattatatg 35017085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 17593774 - 17593728
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttg 321  Q
    |||||||| |||||||||||| |||||||||||||| |||| |||||    
T  17593774 ctaataatttgagaaaatcacgtaattcagtgtaattatatatgttg 17593728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 18421890 - 18421836
Alignment:
Q  278 ataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||| ||||||||||||||||| ||||||||| |||||||| |  |||||||||    
T  18421890 ataatttgagaaaatcacataatccagtgtaattatatgtgtcggcgtcggacac 18421836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 19168902 - 19168829
Alignment:
Q  246 cagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||||||| | ||||||| | ||  ||| |||| ||| |||||||||| |||||||||||| ||||||||    
T  19168902 cagacacggacactgacacacctacaccgctattaatttgataaaatcacattattcagtgtaatcatatgtgt 19168829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 21191108 - 21191051
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| ||| ||||||||||||||||||||||| | | |||| | ||||||||||    
T  21191108 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 21191051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 21194253 - 21194200
Alignment:
Q  279 taatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||| ||||||||||||||||||||||||||| ||  |||||  ||||||||||    
T  21194253 taatttgagaaaatcacataattcagtgtaatcattggtgttagtgtcggacac 21194200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 23016032 - 23015991
Alignment:
Q  284 tgagaaaatcacataattcagtgtaataatatgtgttgatgt 325  Q
    ||||||||||||||||||||||||||| ||| |||| |||||    
T  23016032 tgagaaaatcacataattcagtgtaattataggtgtcgatgt 23015991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 39758290 - 39758323
Alignment:
Q  286 agaaaatcacataattcagtgtaataatatgtgt 319  Q
    ||||||||||||||||||||||||| ||||||||    
T  39758290 agaaaatcacataattcagtgtaattatatgtgt 39758323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 367
Target Start/End: Complemental strand, 6326345 - 6326257
Alignment:
Q  279 taatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacaccgagacactcctaatccgagaagtatcagtgcttc 367  Q
    |||| ||||||||| ||||||||||||||||| | | ||||    |||||||||||  |||| |||||| |||||||| || |||||||    
T  6326345 taatttgagaaaattacataattcagtgtaattacaagtgtcagcgtcggacaccggaacacgcctaattcgagaagtgtccgtgcttc 6326257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 308
Target Start/End: Original strand, 6770523 - 6770583
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgta 308  Q
    |||||||||| | |||||| || ||  |||||||| | |||||||||||||||||||||||    
T  6770523 gacacggacactgacacactgacacaactaataatttaagaaaatcacataattcagtgta 6770583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 14422922 - 14422966
Alignment:
Q  288 aaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||||||||||||||||||||| ||| || | ||||||||||||    
T  14422922 aaaatcacataattcagtgtaattataagtttcgatgtcggacac 14422966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 310
Target Start/End: Original strand, 14674247 - 14674311
Alignment:
Q  246 cagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaat 310  Q
    |||||||||||| | |||| |||| ||  |||||||| ||| |||||||||||||| ||||||||    
T  14674247 cagacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaat 14674311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 19438353 - 19438385
Alignment:
Q  278 ataatgtgagaaaatcacataattcagtgtaat 310  Q
    ||||| |||||||||||||||||||||||||||    
T  19438353 ataatttgagaaaatcacataattcagtgtaat 19438385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 27144470 - 27144514
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| |||| ||||||||||||| |||||||| ||||||||    
T  27144470 ctaataatttgaggaaatcacataatttagtgtaattatatgtgt 27144514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 39205887 - 39205939
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcg 327  Q
    |||||||| ||||||||||| ||||||  ||||||| |||||||||| |||||    
T  39205887 ctaataatttgagaaaatcatataattaggtgtaattatatgtgttggtgtcg 39205939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 43208332 - 43208276
Alignment:
Q  30 acacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtcagtgt 86  Q
    |||| |||| |||||| ||||||| ||||| |||||||||||||||| |||| ||||    
T  43208332 acaccgatagtaatttgagaaaatgacataattcaatgtaatcatatctgtctgtgt 43208276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 319
Target Start/End: Original strand, 23717979 - 23718077
Alignment:
Q  219 atgaagcacatatacagacacagacaccagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtg 318  Q
    |||||||||  |||||||||| ||||   |||||||||| | ||||||||| ||  |||||||| ||||||| ||||||||||||||||||| |||||||    
T  23717979 atgaagcacggatacagacacggacat--gacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtg 23718076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 319
Target Start/End: Original strand, 24105651 - 24105749
Alignment:
Q  219 atgaagcacatatacagacacagacaccagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtg 318  Q
    |||||||||  |||||||||| ||||   |||||||||| | ||||||||| ||  |||||||| ||||||| ||||||||||||||||||| |||||||    
T  24105651 atgaagcacggatacagacacggacat--gacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtg 24105748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 310
Target Start/End: Complemental strand, 21374807 - 21374716
Alignment:
Q  219 atgaagcacatatacagacacagacaccagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaat 310  Q
    |||||||||  |||| ||||| |||||| |||||||||| |||||| |||| ||  |||||||| ||| ||||| |||||||||||||||||    
T  21374807 atgaagcacggatacggacacggacaccggacacggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaat 21374716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 5367199 - 5367256
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| |||| |||||||||||||||||||||| |||||||| | ||||||||||    
T  5367199 ctaataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 5367256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 31026692 - 31026753
Alignment:
Q  26 gtcgacacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtcagtgtc 87  Q
    ||||| || |||| |||||||||||||| ||||| ||||||||||||||||||||| |||||    
T  31026692 gtcgagaccgataataatttaagaaaatgacataattcaatgtaatcatatatgtcggtgtc 31026753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 37411296 - 37411239
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| |||||||||||||||||||||||| || |||||||| ||||||| ||||    
T  37411296 ctaataatttgagaaaatcacataattcagtgtgattatatgtgtcgatgtcgaacac 37411239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 21616769 - 21616813
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  21616769 ctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 37402166 - 37402083
Alignment:
Q  7 gcagcacagacactaacatgtcgacacggatactaatttaagaaaa-taacatatttcaatgtaatcatatatgtcagtgtctg 89  Q
    ||||||||||||| ||||  ||||||| |||  |||||||| |||| | ||||| |||||||||||||||| ||||||||||||    
T  37402166 gcagcacagacacgaacaaatcgacaccgattataatttaaaaaaaatgacataattcaatgtaatcatatgtgtcagtgtctg 37402083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 18570968 - 18571030
Alignment:
Q  25 tgtcgacacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtcagtgtc 87  Q
    |||| |||| |||| |||||| ||||||| ||||| |||||||||||||||| ||||||||||    
T  18570968 tgtcaacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtc 18571030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 20242768 - 20242722
Alignment:
Q  286 agaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||||||||||||||||||||||| |||||||| | ||||||||||    
T  20242768 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 20242722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 896229 - 896286
Alignment:
Q  47 agaaaataacatatttcaatgtaatcatatatgtcagtgtctgacaccaacacatgtc 104  Q
    ||||||| |||||||||||||||||||||| |||| | ||| ||||||||| ||||||    
T  896229 agaaaatcacatatttcaatgtaatcatatgtgtcggcgtcggacaccaacgcatgtc 896286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 21782884 - 21782835
Alignment:
Q  261 acacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaat 310  Q
    |||| |||| ||| |||||||| |||||||||||||||||||||||||||    
T  21782884 acacgccgacactgctaataatttgagaaaatcacataattcagtgtaat 21782835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 34691857 - 34691800
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| ||| ||||||| ||||||||||||||| |||||||| | ||||||||||    
T  34691857 ctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcggacac 34691800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 34714269 - 34714212
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| ||| ||||||| ||||||||||||||| |||||||| | ||||||||||    
T  34714269 ctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcggacac 34714212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 5473336 - 5473392
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||||| ||| ||||||||||||||| |||||||| ||||||| | ||||||||||    
T  5473336 taataatttgaaaaaatcacataattcggtgtaatattatgtgtcggtgtcggacac 5473392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 18889643 - 18889599
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||  ||||||||||||||||||||||||||| ||||||||    
T  18889643 ctaataaattgagaaaatcacataattcagtgtaatcatatgtgt 18889599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 29970601 - 29970549
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcg 327  Q
    |||||||| |||||||||| |||| ||||||||||| |||||||| |||||||    
T  29970601 ctaataatttgagaaaatcgcatagttcagtgtaatcatatgtgtcgatgtcg 29970549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 42832342 - 42832254
Alignment:
Q  261 acacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacaccgagacactcctaatcc 349  Q
    ||||||||| ||  |||||||| ||||||||| ||||| ||||||||||| ||| |||| | |||| ||| ||| ||||| ||||||||    
T  42832342 acacaccgacaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtgtccgactccgggacacgcctaatcc 42832254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 44860327 - 44860371
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| |||||||||| |||||||||||||||| ||||||||    
T  44860327 ctaataatttgagaaaatcgcataattcagtgtaattatatgtgt 44860371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 12748692 - 12748754
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacaccgagaca 339  Q
    ||||||| ||||||||| ||||| ||||||||||| ||| |||||| |||||||||||| ||||    
T  12748692 taataatttgagaaaatgacatagttcagtgtaatcataggtgttg-tgtcggacaccgggaca 12748754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 319
Target Start/End: Complemental strand, 32749868 - 32749833
Alignment:
Q  284 tgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    ||||||||||||||||||||||||||||||| ||||    
T  32749868 tgagaaaatcacataattcagtgtaataataagtgt 32749833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 319
Target Start/End: Original strand, 35449521 - 35449564
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||||    
T  35449521 taataatttgagaaaatcacagaattcagtgtaattatatgtgt 35449564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 319
Target Start/End: Original strand, 39279683 - 39279726
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||||    
T  39279683 taataatatgagaaaatcaaataattcagtgtaattatatgtgt 39279726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 334
Target Start/End: Original strand, 23921261 - 23921319
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacaccg 334  Q
    ||||||| ||||||||| ||||||||||||||||| |||  | ||| ||||||||||||    
T  23921261 taataatttgagaaaattacataattcagtgtaattataaatattggtgtcggacaccg 23921319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 28677916 - 28677958
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgt 317  Q
    |||||||| ||| ||||||||||||||||||||||| ||||||    
T  28677916 ctaataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 30298509 - 30298430
Alignment:
Q  26 gtcgacacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtcagtgtctgacaccaacacatgtctga 107  Q
    |||||||| |||| |||||||| ||||| ||||| |||| ||||||||| |  ||| ||||| |||||| ||||||||||||    
T  30298509 gtcgacaccgataataatttaataaaatgacataattcagtgtaatcatgt--gtcggtgtcggacacccacacatgtctga 30298430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 31808070 - 31808128
Alignment:
Q  261 acacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    ||||||||| ||  |||||||| | | ||||||||||||||||||||||| ||||||||    
T  31808070 acacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgt 31808128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 36281693 - 36281734
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgt 317  Q
    ||||||| |||||||||||||||||| |||||||| ||||||    
T  36281693 taataatttgagaaaatcacataatttagtgtaatcatatgt 36281734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 333
Target Start/End: Original strand, 896204 - 896276
Alignment:
Q  261 acacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacacc 333  Q
    |||| |||| ||| |||||| | ||||||||||||||| |||| |||||| |||||||| |  ||||||||||    
T  896204 acacgccgacactgctaatagtttgagaaaatcacatatttcaatgtaatcatatgtgtcggcgtcggacacc 896276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 308
Target Start/End: Original strand, 2331802 - 2331834
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgta 308  Q
    ||||||| |||||||||||||||||||||||||    
T  2331802 taataatttgagaaaatcacataattcagtgta 2331834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 16630796 - 16630852
Alignment:
Q  30 acacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtcagtgt 86  Q
    |||| |||| |||||||||||||| ||||| |||||| |||||| || |||||||||    
T  16630796 acaccgataataatttaagaaaatgacataattcaatttaatcacatgtgtcagtgt 16630852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 18276528 - 18276572
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| |||||||||||| |||||||||||||| || |||||    
T  18276528 ctaataatttgagaaaatcacttaattcagtgtaattatgtgtgt 18276572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 18622613 - 18622665
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcg 327  Q
    |||||||| | | ||||||||||||||||||||||| ||| |||||| |||||    
T  18622613 ctaataatttaataaaatcacataattcagtgtaattatacgtgttggtgtcg 18622665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 30471041 - 30471089
Alignment:
Q  271 actcctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||||| | |||||||||||||||||||  |||||| ||||||||    
T  30471041 actcctaatattttgagaaaatcacataattcgatgtaattatatgtgt 30471089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 30717582 - 30717530
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcg 327  Q
    |||||||| ||| ||||||||||||||||||||||| | | |||| |||||||    
T  30717582 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcg 30717530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 37497118 - 37497194
Alignment:
Q  27 tcgacacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtcagtgtctgacaccaacacatgt 103  Q
    ||||||| |||| |||||| |||||||  || | ||||||||||| |||| |||| ||||| |||||| ||||||||    
T  37497118 tcgacactgataataatttgagaaaatgccacaattcaatgtaataatatctgtcggtgtcagacaccgacacatgt 37497194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 135379 - 135320
Alignment:
Q  260 aacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||||| ||| |||||||| ||||||||||||||||||| ||||||| ||||||||    
T  135379 aacacaccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgt 135320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 332
Target Start/End: Original strand, 20549784 - 20549855
Alignment:
Q  261 acacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||||||| ||  |||||||| |||||||||||| |||||||||||||| |||||||| | ||||||||||    
T  20549784 acacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacac 20549855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 310
Target Start/End: Complemental strand, 29787447 - 29787386
Alignment:
Q  249 acacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaat 310  Q
    ||||||||| |||||| |||| ||  |||||||| |||||||||||||||||||||||||||    
T  29787447 acacggacattaacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaat 29787386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 22868049 - 22868093
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  22868049 ctaataatatgagaaaatcacataattcagtgtaattatatgtgt 22868093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 3721100 - 3721157
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| |||||||||||||||||| ||| |||| |||||||| | ||||||||||    
T  3721100 ctaataatttgagaaaatcacataatttagtataattatatgtgtcggtgtcggacac 3721157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 25481909 - 25481966
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| ||| ||||||||||||||||||||||| | | |||||| ||||||||||    
T  25481909 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcggacac 25481966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 6630964 - 6630912
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcg 327  Q
    |||||||| ||||||| |||| |||||||||||||| |||||||| |||||||    
T  6630964 ctaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcg 6630912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 9482944 - 9482996
Alignment:
Q  278 ataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggac 330  Q
    ||||| ||||||||||||| ||||||||||||| |||||||| | ||||||||    
T  9482944 ataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcggac 9482996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 17307904 - 17307952
Alignment:
Q  279 taatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcg 327  Q
    |||| ||||||||| ||||||||||||||||| |||||||||| |||||    
T  17307904 taatttgagaaaataacataattcagtgtaattatatgtgttggtgtcg 17307952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 17851438 - 17851482
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| | ||||||||||||||||||||||||| ||||||||    
T  17851438 ctaataattttagaaaatcacataattcagtgtaattatatgtgt 17851482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 331
Target Start/End: Complemental strand, 32287515 - 32287459
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggaca 331  Q
    |||||||| ||||||||||||||||||||||| ||  |||||||| | |||||||||    
T  32287515 ctaataatctgagaaaatcacataattcagtgcaagtatatgtgtcggtgtcggaca 32287459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 32308127 - 32308171
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| |||||||||||||||||||||||||||  |||||||    
T  32308127 ctaataatttgagaaaatcacataattcagtgtaattgtatgtgt 32308171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 310
Target Start/End: Original strand, 2424621 - 2424656
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaat 310  Q
    |||||||| |||||||||||||||||||||||||||    
T  2424621 ctaataatttgagaaaatcacataattcagtgtaat 2424656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 12278836 - 12278922
Alignment:
Q  30 acacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtcagtgtctgacaccaacacatgtctgaaactgggaca 117  Q
    |||| |||| |||||||||||||| ||||| |||| |||||| |||| |||| ||||| ||||||||| | ||||||| || ||||||    
T  12278836 acactgataataatttaagaaaatgacataattcagtgtaattatatgtgtc-gtgtcggacaccaacgcgtgtctgacaccgggaca 12278922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 19206030 - 19206101
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    ||||||||||  ||||| |||| ||  |||||||| |||||||||||||||||||| | |||| ||||||||    
T  19206030 gacacggacaccaacacgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgt 19206101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 319
Target Start/End: Complemental strand, 22602753 - 22602718
Alignment:
Q  284 tgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    ||||||||||||||||||||||||||| ||||||||    
T  22602753 tgagaaaatcacataattcagtgtaattatatgtgt 22602718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 327
Target Start/End: Complemental strand, 35297723 - 35297672
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcg 327  Q
    ||||||| |||||||||||||||||||| | |||| |||||||||| |||||    
T  35297723 taataatttgagaaaatcacataattcattataattatatgtgttggtgtcg 35297672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 38134472 - 38134413
Alignment:
Q  22 acatgtcgacacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtc 81  Q
    |||||| ||||| |||| |||||| ||||||| ||||| |||||||||||||||| ||||    
T  38134472 acatgttgacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtc 38134413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 3095433 - 3095491
Alignment:
Q  29 gacacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtcagtgtc 87  Q
    |||||||||| |||||||| |||||  ||||||| ||| |||||||||||||| |||||    
T  3095433 gacacggatagtaatttaaaaaaatggcatatttgaatataatcatatatgtcggtgtc 3095491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 318
Target Start/End: Original strand, 16341504 - 16341546
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtg 318  Q
    ||||||| |||||||||||||||||| |||||||| |||||||    
T  16341504 taataatttgagaaaatcacataattaagtgtaattatatgtg 16341546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 18213074 - 18213028
Alignment:
Q  286 agaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||||||||||| |||||||| |||||||| | ||||||||||    
T  18213074 agaaaatcacataatttagtgtaattatatgtgtcggtgtcggacac 18213028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 21826259 - 21826337
Alignment:
Q  254 gacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||| |||||| |||| ||  |||||||| | | |||||||||||| ||||| ||||||||||||| | ||||||||||    
T  21826259 gacactaacacgccgacacgactaataatttaaaaaaatcacataactcagtctaataatatgtgtcggtgtcggacac 21826337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 23948381 - 23948451
Alignment:
Q  18 actaacatgtcgacacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtcagtgtct 88  Q
    |||||||||||||||| |||| |||||| | ||||| |  || || ||||||||||||| |||||||||||    
T  23948381 actaacatgtcgacactgataataatttgaaaaaatcaattaattgaatgtaatcatatgtgtcagtgtct 23948451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 310
Target Start/End: Original strand, 27945021 - 27945083
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaat 310  Q
    |||||||||| | |||| |||| ||  |||||||| ||||||||| |||||||||||||||||    
T  27945021 gacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaat 27945083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 349
Target Start/End: Original strand, 28155577 - 28155651
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacaccgagacactcctaatcc 349  Q
    |||||||| ||||||||| ||||||||| ||||||| | | |||| | |||||||||||  ||||| ||||||||    
T  28155577 ctaataatttgagaaaattacataattcggtgtaattacaagtgtcggtgtcggacaccaggacacgcctaatcc 28155651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 39138462 - 39138508
Alignment:
Q  286 agaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||||||||||||||||||||||| |||| ||| | ||||||||||    
T  39138462 agaaaatcacataattcagtgtaattatatatgtcggtgtcggacac 39138508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 4909162 - 4909215
Alignment:
Q  40 taatttaagaaaataacatatttcaatgtaatcatatatgtcagtgtctgacac 93  Q
    |||||| ||||||| ||||| |||| ||||||||||| |||||||||| |||||    
T  4909162 taatttgagaaaattacataattcattgtaatcatatgtgtcagtgtcggacac 4909215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 5233637 - 5233682
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttg 321  Q
    ||||||| |||||||||||||||||  |||||||| ||||||||||    
T  5233637 taataatttgagaaaatcacataatctagtgtaattatatgtgttg 5233682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 5548686 - 5548727
Alignment:
Q  278 ataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||    
T  5548686 ataatttgagaaaatcaaataattcagtgtaattatatgtgt 5548727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 12278843 - 12278899
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacacc 333  Q
    ||||||| | ||||||| ||||||||||||||||| |||||||| | |||||||||||    
T  12278843 taataatttaagaaaatgacataattcagtgtaattatatgtgtcg-tgtcggacacc 12278899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 21880159 - 21880216
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| ||||||||| ||||||||||||||||| | | |||| | ||||||||||    
T  21880159 ctaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcggacac 21880216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 26733311 - 26733368
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| ||| |||||||||||||||||| |||| | |||||| | ||||||||||    
T  26733311 ctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgtcggacac 26733368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 310
Target Start/End: Original strand, 30731046 - 30731079
Alignment:
Q  277 aataatgtgagaaaatcacataattcagtgtaat 310  Q
    |||||| |||||||||||||||||||||||||||    
T  30731046 aataatttgagaaaatcacataattcagtgtaat 30731079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 5835254 - 5835298
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||| | ||||||||| ||||||||||||||||| ||||||||    
T  5835254 ctaatagtttgagaaaataacataattcagtgtaattatatgtgt 5835298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 308
Target Start/End: Complemental strand, 8842414 - 8842354
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgta 308  Q
    |||||||||| ||| ||||||| ||| |||| ||| |||||||||||||| |||| |||||    
T  8842414 gacacggacactaatacaccgacactgctaagaatttgagaaaatcacatgattctgtgta 8842354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 19992008 - 19992052
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| ||||||||||||||| ||||||||||| ||| ||||    
T  19992008 ctaataatttgagaaaatcacatatttcagtgtaattataagtgt 19992052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 23746967 - 23747007
Alignment:
Q  316 gtgttgatgtcggacaccgagacactcctaatccgagaagt 356  Q
    |||||| ||||||||| |||||||| |||||||||||||||    
T  23746967 gtgttggtgtcggacatcgagacacgcctaatccgagaagt 23747007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 23930217 - 23930265
Alignment:
Q  27 tcgacacggatactaatttaagaaaataacatatttcaatgtaatcata 75  Q
    |||||||||||| |||||| ||||||| ||||| |||| ||||||||||    
T  23930217 tcgacacggatagtaatttgagaaaatgacataattcagtgtaatcata 23930265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 36314675 - 36314639
Alignment:
Q  40 taatttaagaaaataacatatttcaatgtaatcatat 76  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  36314675 taatttgagaaaatgacatatttcaatgtaatcatat 36314639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 38143231 - 38143287
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||||| ||| |||||||||||||| | |||||| |||||||||| |||| |||||    
T  38143231 taataatttgaaaaaatcacataatttaatgtaattatatgtgttggtgtcagacac 38143287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 41360903 - 41360951
Alignment:
Q  22 acatgtcgacacggatactaatttaagaaaataacatatttcaatgtaa 70  Q
    |||||| ||||| |||| |||||| ||||||||||||| ||||||||||    
T  41360903 acatgtggacactgatattaatttgagaaaataacataattcaatgtaa 41360951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 276 - 327
Target Start/End: Complemental strand, 16192801 - 16192750
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcg 327  Q
    ||||||| ||||||||| ||||||||||||||||| ||||||||||||||||    
T  16192801 taataatttgagaaaataacataattcagtgtaattatatgtgttgatgtcg 16192750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 7928457 - 7928514
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| ||| ||||||||||||||||||||||| |||||||| | ||||||||||    
T  7928457 ctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 7928514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 320
Target Start/End: Complemental strand, 11313864 - 11313807
Alignment:
Q  263 acaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgtt 320  Q
    ||||||| ||| |||||||| |||||||||||||||||| |||||||| |||||||||    
T  11313864 acaccgacactgctaataatttgagaaaatcacataatttagtgtaattatatgtgtt 11313807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 11493413 - 11493372
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatg 316  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  11493413 ctaataatgtgagaaaatcacataattcagtgtaattatatg 11493372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 45451560 - 45451617
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||| | ||||||||||    
T  45451560 ctaataatttgagaaaatcacatacttcagtataataatatgtgtcggtgtcggacac 45451617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 332
Target Start/End: Original strand, 8383237 - 8383321
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||||| | |||| |||| ||  |||||||| ||||||||||| ||||||||||||||| ||| |||| | ||||||||||    
T  8383237 gacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcggacac 8383321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 332
Target Start/End: Original strand, 25093482 - 25093566
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||| |||| |||||| |||| |||  |||| || ||||||||||||| ||||||||||||| |||||||| | ||||||||||    
T  25093482 gacactgacactaacacgccgacactgttaatgatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacac 25093566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 332
Target Start/End: Complemental strand, 8789616 - 8789545
Alignment:
Q  261 acacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||||||| ||  || ||||| ||||||||||||||||||| ||||||| |||||||| | ||||||||||    
T  8789616 acacaccgacacggcttataatttgagaaaatcacataattccgtgtaattatatgtgtcggtgtcggacac 8789545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 325
Target Start/End: Original strand, 29508422 - 29508501
Alignment:
Q  246 cagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgt 325  Q
    |||||| ||||| | ||||||||| ||  |||||||| ||| ||||||| ||||||||||||||| |||||||| |||||    
T  29508422 cagacatggacattgacacaccgataccactaataatttgaaaaaatcatataattcagtgtaattatatgtgtcgatgt 29508501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 356
Target Start/End: Original strand, 13414487 - 13414557
Alignment:
Q  286 agaaaatcacataattcagtgtaataatatgtgttgatgtcggacaccgagacactcctaatccgagaagt 356  Q
    ||||||||| |||||||| |||||| |||||||| | |||||||||| | ||||| ||| |||||||||||    
T  13414487 agaaaatcaaataattcaatgtaattatatgtgtcggtgtcggacacagggacacgccttatccgagaagt 13414557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 327
Target Start/End: Complemental strand, 25948968 - 25948887
Alignment:
Q  246 cagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcg 327  Q
    |||||||||||| | |||  |||| ||  |||||||| ||| ||||||||||||||||||||||| ||| |||||| |||||    
T  25948968 cagacacggacactgacatgccgatacggctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcg 25948887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 45382754 - 45382795
Alignment:
Q  40 taatttaagaaaataacatatttcaatgtaatcatatatgtc 81  Q
    ||||||||||||||||||||||| |||||||||| |||||||    
T  45382754 taatttaagaaaataacatatttgaatgtaatcacatatgtc 45382795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 49505206 - 49505149
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| |||||||||||||||||| |||||||| ||||||||   ||||||||||    
T  49505206 ctaataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcggacac 49505149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 3164077 - 3164025
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcg 327  Q
    |||||||| ||| |||||||||||||||||||||| || | ||||||||||||    
T  3164077 ctaataatttgaaaaaatcacataattcagtgtaagaacaagtgttgatgtcg 3164025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 332
Target Start/End: Complemental strand, 6780462 - 6780414
Alignment:
Q  284 tgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||||||| || ||||||||||| |||||||||| ||||||||||    
T  6780462 tgagaaaatcacgtagttcagtgtaattatatgtgttggtgtcggacac 6780414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 315
Target Start/End: Complemental strand, 10690314 - 10690274
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatat 315  Q
    |||||||| ||||||||||||||||||||||||||| ||||    
T  10690314 ctaataatctgagaaaatcacataattcagtgtaattatat 10690274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 318
Target Start/End: Original strand, 14618787 - 14618831
Alignment:
Q  274 cctaataatgtgagaaaatcacataattcagtgtaataatatgtg 318  Q
    ||||||||| | |||||| ||||||||||||||||||||||||||    
T  14618787 cctaataatttaagaaaaccacataattcagtgtaataatatgtg 14618831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 19323521 - 19323449
Alignment:
Q  15 gacactaacatgtcgacacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtcagtgtc 87  Q
    ||||||||||||||||||| |||| |||||| ||||||| ||||| || ||| |||||| || ||| ||||||    
T  19323521 gacactaacatgtcgacactgatagtaatttgagaaaatgacataattgaatttaatcacatgtgtaagtgtc 19323449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 20691327 - 20691383
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||| | |||| |||||    
T  20691327 taataatttgagaaaatgacataattcagtgtaatcatatgtgtcggtgtcagacac 20691383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 40993374 - 40993330
Alignment:
Q  288 aaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||||||||||||||||||||| |||||||| | ||||||||||    
T  40993374 aaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 40993330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 332
Target Start/End: Original strand, 10954925 - 10955016
Alignment:
Q  241 gacaccagacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||| |||||| ||| | |||| |||| ||  |||||||| ||| ||||||||||||||||||||||| | | |||| | ||||||||||    
T  10954925 gacaccggacacgaacactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcggacac 10955016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 310
Target Start/End: Original strand, 11251985 - 11252020
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaat 310  Q
    |||||||| |||||||||||||||||||||||||||    
T  11251985 ctaataatttgagaaaatcacataattcagtgtaat 11252020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 319
Target Start/End: Complemental strand, 32804591 - 32804548
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    ||||||| |||||||||||||||||| |||||||| ||||||||    
T  32804591 taataatttgagaaaatcacataatttagtgtaattatatgtgt 32804548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 1438811 - 1438861
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgt 325  Q
    |||| ||| |||||||||||||||||||||| |||| |||||| |||||||    
T  1438811 ctaacaatttgagaaaatcacataattcagtataattatatgtattgatgt 1438861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 318
Target Start/End: Complemental strand, 4704339 - 4704301
Alignment:
Q  280 aatgtgagaaaatcacataattcagtgtaataatatgtg 318  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  4704339 aatgtgagaaaatgacataattcagtgtaatcatatgtg 4704301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 12704014 - 12704056
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgt 317  Q
    |||||||| |||||||| |||||||||||||||||| ||||||    
T  12704014 ctaataatttgagaaaagcacataattcagtgtaattatatgt 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 28590859 - 28590917
Alignment:
Q  15 gacactaacatgtcgacacggatactaatttaagaaaataacatatttcaatgtaatca 73  Q
    ||||||||||||| ||||| |||| |||||| ||||||||||| | || ||||||||||    
T  28590859 gacactaacatgttgacaccgataataatttgagaaaataacaaagttgaatgtaatca 28590917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 367
Target Start/End: Complemental strand, 8789537 - 8789492
Alignment:
Q  322 atgtcggacaccgagacactcctaatccgagaagtatcagtgcttc 367  Q
    ||||||||||||||||||| ||||||||||| ||| || |||||||    
T  8789537 atgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttc 8789492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 9624648 - 9624689
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatg 316  Q
    |||||||| |||||||||||||||||||| |||||| |||||    
T  9624648 ctaataatttgagaaaatcacataattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 35222956 - 35223001
Alignment:
Q  286 agaaaatcacataattcagtgtaataatatgtgttgatgtcggaca 331  Q
    |||||||||||||||||| |||||| |||||||| | |||||||||    
T  35222956 agaaaatcacataattcaatgtaattatatgtgtcggtgtcggaca 35223001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 40150624 - 40150567
Alignment:
Q  35 gatactaatttaagaaaataacatatttcaatgtaatcatatatgtcagtgtctgaca 92  Q
    |||| |||||| ||||||| | ||| |||||||||||||||| |||| ||||||||||    
T  40150624 gataataatttgagaaaatgatataattcaatgtaatcatatgtgtcggtgtctgaca 40150567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 8039887 - 8039843
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| ||||||||| | ||||||||||||||| ||||||||    
T  8039887 ctaataatttgagaaaattatataattcagtgtaattatatgtgt 8039843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 10455797 - 10455849
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcg 327  Q
    |||||||| ||||||||||| |||| | |||||||| |||||||||| |||||    
T  10455797 ctaataatatgagaaaatcatataactaagtgtaattatatgtgttggtgtcg 10455849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 12674580 - 12674528
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataat 300  Q
    |||||||||| | ||||||||| ||| |||||||| ||||||||||| |||||    
T  12674580 gacacggacattgacacaccgacactgctaataatttgagaaaatcaaataat 12674528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 15314924 - 15314876
Alignment:
Q  279 taatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcg 327  Q
    |||| ||| |||||||||||||| |||||||| |||||||||| |||||    
T  15314924 taatttgaaaaaatcacataatttagtgtaattatatgtgttggtgtcg 15314876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 21419503 - 21419463
Alignment:
Q  40 taatttaagaaaataacatatttcaatgtaatcatatatgt 80  Q
    |||||||||||||||| ||| ||||||||||| ||||||||    
T  21419503 taatttaagaaaataatataattcaatgtaattatatatgt 21419463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 34307832 - 34307788
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| ||||||||||||||| ||||||||||| ||| ||||    
T  34307832 ctaataatttgagaaaatcacatatttcagtgtaattataagtgt 34307788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 36635331 - 36635376
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgtt 320  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||    
T  36635331 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtt 36635376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 373
Target Start/End: Complemental strand, 17425445 - 17425345
Alignment:
Q  271 actcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacaccgagacactcctaatccgagaagtatcagtgcttcgta 370  Q
    |||||||||||| |||||||||| ||||||||||||||||  |||||||   |||| |||||   ||||| ||||||||||| ||| || ||||||| ||    
T  17425445 actcctaataatttgagaaaatcgcataattcagtgtaat--tatgtgtctgtgtcagacacaaggacacgcctaatccgaggagtgtctgtgcttcata 17425348  T
Q  371 tta 373  Q
    |||    
T  17425347 tta 17425345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 367
Target Start/End: Complemental strand, 22440651 - 22440561
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacaccgagacactcctaatccgagaagtatcagtgcttc 367  Q
    ||||||| ||||||||||||||||||||||||||| |||||||  | |||| |||||   ||||| ||||||||||| ||| || |||||||    
T  22440651 taataatttgagaaaatcacataattcagtgtaattatatgtgacg-tgtccgacactaggacacgcctaatccgaggagtgtccgtgcttc 22440561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 903930 - 903971
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgt 317  Q
    ||||||| ||||||||||||||||||||||||||| ||||||    
T  903930 taataatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 5654657 - 5654604
Alignment:
Q  22 acatgtcgacacggatactaatttaagaaaataacatatttcaatgtaatcata 75  Q
    |||||||||||| |||| |||||| ||||||| ||||| |||||||||||||||    
T  5654657 acatgtcgacactgataataatttgagaaaatgacataattcaatgtaatcata 5654604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 8423770 - 8423713
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| ||||||||||||||||||||||||||| |||  ||| | ||||||||||    
T  8423770 ctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtcggacac 8423713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 15029772 - 15029825
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcgg 328  Q
    |||||||| ||| || |||||||||||||||||||| |||||||||| ||||||    
T  15029772 ctaataatttgaaaatatcacataattcagtgtaattatatgtgttggtgtcgg 15029825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 18513300 - 18513243
Alignment:
Q  29 gacacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtcagtgt 86  Q
    ||||| |||| |||||| ||||||| ||||| |||||||||||||||| |||||||||    
T  18513300 gacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgt 18513243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 54580075 - 54580018
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||| ||| ||||||||||||||||||||||| ||| |||| | ||||||||||    
T  54580075 ctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcggacac 54580018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 10499313 - 10499246
Alignment:
Q  284 tgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacaccgagacactcctaatccgag 352  Q
    |||||||||||||||||| |||||||| ||||||||   |||||||| |||| |||| |||||||||||    
T  10499313 tgagaaaatcacataatttagtgtaattatatgtgtcagtgtcggac-ccgacacacgcctaatccgag 10499246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 326
Target Start/End: Complemental strand, 18576086 - 18576038
Alignment:
Q  278 ataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtc 326  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||| ||||    
T  18576086 ataatttgagaaaatcacataattcggtgtaattatatgtgttggtgtc 18576038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 40613457 - 40613501
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||| | ||||||||||||||||||||||||||| ||||||||    
T  40613457 ctaatattttgagaaaatcacataattcagtgtaattatatgtgt 40613501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 43300616 - 43300668
Alignment:
Q  29 gacacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtc 81  Q
    |||||||||| |||||| ||||||| ||||| |||||||||||||||| ||||    
T  43300616 gacacggataataatttgagaaaattacataattcaatgtaatcatatttgtc 43300668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 46180986 - 46180942
Alignment:
Q  277 aataatgtgagaaaatcacataattcagtgtaataatatgtgttg 321  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||    
T  46180986 aataatttgagaaaataacataattcagtgtaatcatatgtgttg 46180942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 319
Target Start/End: Complemental strand, 5775409 - 5775366
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    ||||||| |||||||||||||||||| |||||||| ||||||||    
T  5775409 taataatttgagaaaatcacataattaagtgtaattatatgtgt 5775366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 43300030 - 43299983
Alignment:
Q  29 gacacggatactaatttaagaaaataacatatttcaatgtaatcatat 76  Q
    |||||||||| |||||| ||||||| ||||| ||||||||||||||||    
T  43300030 gacacggataataatttgagaaaattacataattcaatgtaatcatat 43299983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 13783261 - 13783331
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtg 318  Q
    |||||||||| | ||||||||| ||  ||||| || |||||| |||||| ||||||||||||| |||||||    
T  13783261 gacacggacactgacacaccgacaccgctaattatttgagaagatcacaaaattcagtgtaattatatgtg 13783331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 333
Target Start/End: Original strand, 33950143 - 33950201
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacacc 333  Q
    |||||||| |||||||||||||||||| | |||||| |||||||| | |||| ||||||    
T  33950143 ctaataatttgagaaaatcacataatttaatgtaatcatatgtgtcggtgtcagacacc 33950201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 10546141 - 10546194
Alignment:
Q  22 acatgtcgacacggatactaatttaagaaaataacatatttcaatgtaatcata 75  Q
    |||||||||||  |||| |||||| ||||||| ||||| |||||||||||||||    
T  10546141 acatgtcgacaatgataataatttgagaaaatgacataattcaatgtaatcata 10546194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 327
Target Start/End: Original strand, 13134468 - 13134509
Alignment:
Q  286 agaaaatcacataattcagtgtaataatatgtgttgatgtcg 327  Q
    |||||||||||||||| |||||||| |||||||| |||||||    
T  13134468 agaaaatcacataatttagtgtaattatatgtgtcgatgtcg 13134509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 16189716 - 16189773
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||| ||| ||||||||||||||||||||||||||| || ||||| | || |||||||    
T  16189716 ctaaaaatttgagaaaatcacataattcagtgtaattatgtgtgtcggtgacggacac 16189773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 20743329 - 20743284
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttg 321  Q
    ||||||| ||||||||| ||||||||||||||||| ||| ||||||    
T  20743329 taataatttgagaaaatgacataattcagtgtaatcataggtgttg 20743284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 33950147 - 33950204
Alignment:
Q  40 taatttaagaaaataacatatttcaatgtaatcatatatgtcagtgtctgacaccaac 97  Q
    |||||| ||||||| ||||| || ||||||||||||| |||| ||||| |||||||||    
T  33950147 taatttgagaaaatcacataatttaatgtaatcatatgtgtcggtgtcagacaccaac 33950204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 6933282 - 6933326
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||||| |||||||| ||||||||||| |||| ||||||||    
T  6933282 ctaataatgtaagaaaatctcataattcagtttaatcatatgtgt 6933326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 9996849 - 9996889
Alignment:
Q  277 aataatgtgagaaaatcacataattcagtgtaataatatgt 317  Q
    |||||| |||||||||||||||||||||| |||| ||||||    
T  9996849 aataatttgagaaaatcacataattcagtataattatatgt 9996889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 332
Target Start/End: Complemental strand, 23293065 - 23292981
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    |||||||||| | |||| |||| ||  |||||||| ||| |||||||||||||||||| |||| | | |||| | ||||||||||    
T  23293065 gacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcggacac 23292981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 30103412 - 30103365
Alignment:
Q  271 actcctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    ||||| |||||| |||||||||||||||||| |||||||| ||||||||    
T  30103412 actccaaataatttgagaaaatcacataatt-agtgtaatcatatgtgt 30103365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 40179675 - 40179631
Alignment:
Q  288 aaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||||||||||||||||||||| ||||| || | ||||||||||    
T  40179675 aaaatcacataattcagtgtaattatatgcgtcggtgtcggacac 40179631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 331
Target Start/End: Original strand, 42014974 - 42015022
Alignment:
Q  284 tgagaaaatcacataa-ttcagtgtaataatatgtgttgatgtcggaca 331  Q
    ||||| |||||||||| ||||||||||| |||||||||| |||||||||    
T  42014974 tgagataatcacataaattcagtgtaattatatgtgttggtgtcggaca 42015022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 48139272 - 48139328
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||||| ||||| |||| ||||||| | |||||| ||||||||||||||| |||||    
T  48139272 taataatttgagataatctcataatttaatgtaattatatgtgttgatgtcagacac 48139328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 99886 - 99940
Alignment:
Q  22 acatgtcgacacggatactaatttaagaaaataacatatttcaatgtaatcatat 76  Q
    |||||||||||| |||| |||||| ||||||||||||| ||||||||||| ||||    
T  99886 acatgtcgacaccgataataattttagaaaataacataattcaatgtaattatat 99940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 90851 - 90907
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||||| ||||||||||| ||||||||||||||| |||| ||| |||||| |||||    
T  90851 taataatttgagaaaatcatataattcagtgtaattatatatgtcgatgtcagacac 90907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 1946 - 2026
Alignment:
Q  26 gtcgacacggatactaatttaagaaaataacatatttcaatgtaatcatatatgtcagtgtctgacaccaacacatgtctga 107  Q
    ||||||||||||| ||||||  |||||| |||||||| | ||||||||||  |||| ||||| |||||| ||||||||||||    
T  1946 gtcgacacggataataatttgtgaaaatgacatattttagtgtaatcataggtgtc-gtgtcggacaccgacacatgtctga 2026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 44577 - 44533
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||| ||| ||||||||||||||||||||||||||| ||||||||    
T  44577 ctaaaaatttgagaaaatcacataattcagtgtaattatatgtgt 44533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 9799 - 9755
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| |||||||||||| |||||||||||||| ||||||||    
T  9799 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgt 9755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 13380 - 13438
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtg 306  Q
    |||||||||| | |||| |||| ||  |||||||| |||||||||||||||||||||||    
T  13380 gacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtg 13438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 310
Target Start/End: Original strand, 20152 - 20214
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaat 310  Q
    |||||||||| | |||| |||| ||  |||||||| ||| |||||||||||||||||||||||    
T  20152 gacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaat 20214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 21947 - 21889
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtg 306  Q
    |||||||||| | |||| |||| ||  |||||||| |||||||||||||||||||||||    
T  21947 gacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtg 21889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 310
Target Start/End: Original strand, 51791 - 51853
Alignment:
Q  248 gacacggacagtaacacaccgaaactcctaataatgtgagaaaatcacataattcagtgtaat 310  Q
    |||||||||| | |||| |||| ||  |||||||| ||| |||||||||||||||||||||||    
T  51791 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaat 51853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 319
Target Start/End: Original strand, 53189 - 53231
Alignment:
Q  277 aataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgt 53231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 70286 - 70342
Alignment:
Q  276 taataatgtgagaaaatcacataattcagtgtaataatatgtgttgatgtcggacac 332  Q
    ||||||| ||| ||||| ||||||||||||||||| ||| |||| | ||||||||||    
T  70286 taataatttgaaaaaataacataattcagtgtaattataagtgtcggtgtcggacac 70342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 192075 - 192119
Alignment:
Q  15 gacactaacatgtcgacacggatactaatttaagaaaataacata 59  Q
    |||||||||||||| |||| |||| ||||||| ||||||||||||    
T  192075 gacactaacatgtcaacactgataataatttatgaaaataacata 192119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 263424 - 263380
Alignment:
Q  275 ctaataatgtgagaaaatcacataattcagtgtaataatatgtgt 319  Q
    |||||||| |||||||| |||||||||||||||||| ||| ||||    
T  263424 ctaataatttgagaaaaccacataattcagtgtaattataagtgt 263380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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