View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6365_low_27 (Length: 357)
Name: NF6365_low_27
Description: NF6365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6365_low_27 |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 100 - 334
Target Start/End: Original strand, 39725949 - 39726183
Alignment:
| Q |
100 |
tgtagacaaaagaatatcgtccgaagattctttgaattgccgttacactaaatcatttatctcatcttctaaatttttactatgctttcttaattgccat |
199 |
Q |
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| T |
39725949 |
tgtagacaaaagaatatcgtccgaagattctttgtattgccgttacactaaataatttatctcatcttctaaatttttactatgctctcttaattgccat |
39726048 |
T |
|
| Q |
200 |
tcacaccattgaccattttcataatttattttccaaactctacaaggaaacattggtgacaactaacattttctgttcacagtctctagtgtattaaagg |
299 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
39726049 |
tcacaccattgaccattttcataatttattttccaaactctacaaggaaacattggtgacaaccaacattttctgttcacagtctctagtgtattaaagg |
39726148 |
T |
|
| Q |
300 |
caatttgtttatctataaaattcaaaatgtgtgag |
334 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
39726149 |
caatttgtttatctataaaattcaaaatgtgtgag |
39726183 |
T |
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