View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6366_high_12 (Length: 237)

Name: NF6366_high_12
Description: NF6366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6366_high_12
NF6366_high_12
[»] chr5 (25 HSPs)
chr5 (18-222)||(25562449-25562652)
chr5 (78-221)||(26406632-26406775)
chr5 (78-221)||(25837987-25838130)
chr5 (84-221)||(17841408-17841546)
chr5 (100-221)||(31782616-31782738)
chr5 (78-221)||(2298160-2298305)
chr5 (78-221)||(22672713-22672857)
chr5 (78-221)||(35385611-35385755)
chr5 (78-221)||(40222642-40222786)
chr5 (88-221)||(25452384-25452518)
chr5 (96-221)||(16093450-16093575)
chr5 (78-221)||(1240307-1240451)
chr5 (96-221)||(10627260-10627387)
chr5 (88-221)||(25445381-25445519)
chr5 (96-221)||(11962592-11962717)
chr5 (88-221)||(1170702-1170834)
chr5 (84-193)||(42238188-42238298)
chr5 (84-221)||(28786291-28786427)
chr5 (161-221)||(15445430-15445493)
chr5 (165-217)||(4897792-4897844)
chr5 (100-176)||(35314703-35314779)
chr5 (107-178)||(4754166-4754237)
chr5 (186-221)||(13295823-13295858)
chr5 (126-221)||(13294711-13294812)
chr5 (98-171)||(29748349-29748423)
[»] chr7 (30 HSPs)
chr7 (78-221)||(25351233-25351376)
chr7 (78-221)||(25356927-25357070)
chr7 (78-221)||(25410010-25410153)
chr7 (96-221)||(21369539-21369665)
chr7 (96-221)||(44016820-44016946)
chr7 (88-221)||(8378663-8378797)
chr7 (78-221)||(34547022-34547166)
chr7 (89-221)||(44144025-44144157)
chr7 (96-221)||(44010909-44011035)
chr7 (78-221)||(6067359-6067503)
chr7 (84-221)||(7464677-7464815)
chr7 (100-221)||(42006565-42006686)
chr7 (88-221)||(7069671-7069803)
chr7 (88-221)||(7074678-7074810)
chr7 (88-221)||(15541154-15541286)
chr7 (88-221)||(25405284-25405416)
chr7 (100-221)||(2120800-2120922)
chr7 (84-221)||(44512684-44512822)
chr7 (117-221)||(1099593-1099697)
chr7 (100-221)||(30246872-30246993)
chr7 (88-221)||(3320209-3320341)
chr7 (88-221)||(3324957-3325089)
chr7 (99-178)||(11081520-11081600)
chr7 (101-221)||(45366544-45366656)
chr7 (98-221)||(6048882-6049000)
chr7 (126-178)||(11084417-11084469)
chr7 (160-197)||(1099717-1099754)
chr7 (128-178)||(6332263-6332313)
chr7 (156-221)||(12310175-12310234)
chr7 (124-168)||(13290681-13290725)
[»] chr4 (35 HSPs)
chr4 (78-221)||(16638706-16638850)
chr4 (78-221)||(16489229-16489372)
chr4 (78-221)||(25699629-25699772)
chr4 (96-221)||(47566390-47566516)
chr4 (100-218)||(15312218-15312336)
chr4 (96-221)||(36771293-36771419)
chr4 (78-221)||(15831020-15831164)
chr4 (78-221)||(18586845-18586989)
chr4 (78-221)||(31300303-31300447)
chr4 (78-221)||(4569974-4570117)
chr4 (96-221)||(13072140-13072265)
chr4 (100-217)||(36769380-36769498)
chr4 (78-221)||(4556218-4556362)
chr4 (107-221)||(8529176-8529290)
chr4 (96-221)||(4558208-4558334)
chr4 (100-221)||(15316860-15316981)
chr4 (109-221)||(25614079-25614191)
chr4 (88-221)||(11853440-11853572)
chr4 (78-221)||(4884753-4884897)
chr4 (78-221)||(16689099-16689243)
chr4 (124-212)||(26557664-26557752)
chr4 (100-221)||(55822169-55822288)
chr4 (126-221)||(7050416-7050511)
chr4 (100-195)||(32274087-32274181)
chr4 (100-221)||(4874638-4874759)
chr4 (107-217)||(3982342-3982450)
chr4 (107-221)||(16185995-16186108)
chr4 (129-221)||(5336941-5337035)
chr4 (99-178)||(10112925-10113005)
chr4 (98-178)||(38208880-38208961)
chr4 (98-178)||(9022359-9022440)
chr4 (100-178)||(23001582-23001660)
chr4 (100-178)||(5516453-5516531)
chr4 (98-178)||(52043579-52043660)
chr4 (99-178)||(47151090-47151169)
[»] chr8 (26 HSPs)
chr8 (96-221)||(30423109-30423235)
chr8 (78-221)||(2267182-2267326)
chr8 (100-221)||(28895404-28895525)
chr8 (96-221)||(33032552-33032677)
chr8 (78-221)||(9021266-9021410)
chr8 (78-221)||(21033749-21033893)
chr8 (100-221)||(590696-590817)
chr8 (100-221)||(23179720-23179841)
chr8 (78-221)||(29554944-29555088)
chr8 (96-221)||(17799583-17799708)
chr8 (100-215)||(26268395-26268510)
chr8 (88-221)||(28327799-28327931)
chr8 (100-221)||(16752681-16752800)
chr8 (100-221)||(17847581-17847701)
chr8 (100-221)||(16757426-16757545)
chr8 (88-219)||(4812648-4812778)
chr8 (88-221)||(28332522-28332654)
chr8 (88-221)||(25684534-25684666)
chr8 (100-221)||(15949436-15949557)
chr8 (84-221)||(3276229-3276367)
chr8 (100-194)||(15944775-15944869)
chr8 (100-221)||(28228416-28228537)
chr8 (99-221)||(6376042-6376164)
chr8 (108-198)||(33021079-33021170)
chr8 (105-178)||(31573922-31573995)
chr8 (181-221)||(13985239-13985278)
[»] chr1 (14 HSPs)
chr1 (78-221)||(3091265-3091409)
chr1 (96-221)||(4144842-4144967)
chr1 (87-221)||(14996929-14997063)
chr1 (78-221)||(9526345-9526489)
chr1 (78-221)||(25133951-25134094)
chr1 (78-221)||(21353505-21353649)
chr1 (78-221)||(2393441-2393584)
chr1 (88-221)||(9521604-9521738)
chr1 (88-221)||(2232488-2232620)
chr1 (107-221)||(46783052-46783166)
chr1 (133-221)||(2401380-2401468)
chr1 (104-178)||(14352964-14353038)
chr1 (127-175)||(13785483-13785531)
chr1 (99-202)||(20566847-20566947)
[»] chr6 (25 HSPs)
chr6 (96-221)||(19702021-19702147)
chr6 (78-221)||(17695010-17695154)
chr6 (78-221)||(3577673-3577817)
chr6 (78-221)||(25466058-25466202)
chr6 (78-221)||(22342960-22343104)
chr6 (78-221)||(22352011-22352155)
chr6 (78-221)||(13467622-13467766)
chr6 (97-221)||(26643075-26643199)
chr6 (97-221)||(26749041-26749165)
chr6 (100-220)||(24542834-24542953)
chr6 (117-221)||(17035974-17036078)
chr6 (88-221)||(13878618-13878750)
chr6 (88-221)||(13883366-13883498)
chr6 (88-221)||(16785810-16785942)
chr6 (88-221)||(31248873-31249005)
chr6 (88-221)||(35201485-35201617)
chr6 (100-221)||(26887383-26887502)
chr6 (84-221)||(33215712-33215850)
chr6 (78-221)||(25941524-25941667)
chr6 (130-221)||(12166305-12166397)
chr6 (96-221)||(5165974-5166099)
chr6 (98-178)||(22858150-22858231)
chr6 (124-221)||(7293862-7293958)
chr6 (98-178)||(30445552-30445633)
chr6 (109-221)||(20526855-20526960)
[»] scaffold0004 (1 HSPs)
scaffold0004 (78-221)||(188401-188545)
[»] chr3 (36 HSPs)
chr3 (78-219)||(5858425-5858567)
chr3 (78-221)||(47878330-47878474)
chr3 (78-221)||(47883041-47883184)
chr3 (78-221)||(22626143-22626287)
chr3 (78-221)||(13893341-13893485)
chr3 (78-221)||(27762145-27762287)
chr3 (78-221)||(54193104-54193249)
chr3 (78-217)||(10612941-10613081)
chr3 (78-221)||(10896884-10897028)
chr3 (88-221)||(16462092-16462226)
chr3 (88-221)||(29914112-29914246)
chr3 (96-221)||(38002767-38002892)
chr3 (98-213)||(3329792-3329908)
chr3 (78-221)||(10949419-10949561)
chr3 (78-221)||(11079397-11079540)
chr3 (91-221)||(10595193-10595323)
chr3 (78-221)||(4535493-4535637)
chr3 (88-221)||(6303201-6303333)
chr3 (88-221)||(10094233-10094365)
chr3 (88-221)||(10100250-10100382)
chr3 (88-221)||(10201113-10201245)
chr3 (100-221)||(27544177-27544296)
chr3 (103-221)||(16996780-16996898)
chr3 (88-221)||(10208159-10208291)
chr3 (100-221)||(54188410-54188532)
chr3 (100-202)||(15823788-15823889)
chr3 (100-221)||(26762941-26763061)
chr3 (124-221)||(20031477-20031574)
chr3 (100-212)||(27703338-27703450)
chr3 (107-211)||(46966817-46966921)
chr3 (96-219)||(7417967-7418085)
chr3 (78-154)||(48390445-48390523)
chr3 (160-198)||(42297838-42297876)
chr3 (99-221)||(7768552-7768670)
chr3 (99-151)||(1618882-1618934)
chr3 (105-178)||(13419870-13419943)
[»] chr2 (32 HSPs)
chr2 (78-221)||(22712675-22712819)
chr2 (78-221)||(12781380-12781523)
chr2 (78-221)||(38190877-38191020)
chr2 (78-221)||(30478873-30479017)
chr2 (88-221)||(17932523-17932657)
chr2 (100-221)||(27517798-27517919)
chr2 (78-221)||(20050181-20050325)
chr2 (78-221)||(17943417-17943560)
chr2 (88-221)||(22717384-22717518)
chr2 (88-221)||(33674564-33674698)
chr2 (78-221)||(20054924-20055068)
chr2 (78-221)||(37170911-37171055)
chr2 (78-199)||(35894442-35894564)
chr2 (88-221)||(17462327-17462459)
chr2 (88-221)||(39686874-39687006)
chr2 (88-221)||(45567300-45567432)
chr2 (100-219)||(33603897-33604015)
chr2 (88-221)||(2736096-2736228)
chr2 (88-221)||(2740832-2740964)
chr2 (88-221)||(39679936-39680068)
chr2 (100-202)||(30261951-30262052)
chr2 (147-221)||(45158257-45158331)
chr2 (162-221)||(20589727-20589786)
chr2 (174-221)||(28458988-28459035)
chr2 (100-178)||(26345575-26345653)
chr2 (99-178)||(43139354-43139434)
chr2 (126-178)||(30720820-30720872)
chr2 (96-178)||(27248111-27248193)
chr2 (100-178)||(35028556-35028634)
chr2 (96-168)||(39287183-39287256)
chr2 (100-172)||(10942726-10942798)
chr2 (100-172)||(10948595-10948667)
[»] scaffold0256 (1 HSPs)
scaffold0256 (88-221)||(16214-16348)
[»] scaffold0209 (1 HSPs)
scaffold0209 (100-221)||(17145-17266)
[»] scaffold0131 (1 HSPs)
scaffold0131 (88-221)||(31032-31164)
[»] scaffold0006 (1 HSPs)
scaffold0006 (88-221)||(224710-224842)
[»] scaffold1764 (1 HSPs)
scaffold1764 (88-152)||(1325-1391)


Alignment Details
Target: chr5 (Bit Score: 137; Significance: 1e-71; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 222
Target Start/End: Complemental strand, 25562652 - 25562449
Alignment:
Q  18 gcttgtgtcacaatttgataattcacccgttgacacatcacagttaggtattcaccatgttatcatatgaaaaagtgcgtagaaaacaaggtttagaaac 117  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| |||||||| |||||| ||||||    
T  25562652 gcttgtgtcacaatttgattattcacccgttgacacatcacagttaggcattcaccatgttatcagatgaaaacgtgtgtagaaaataaggtt-agaaac 25562554  T
Q  118 caacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaaacacttttaggattgagt 217  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||| | |||| ||||||||||||||||||||||||||||||||||| |||||||| |||    
T  25562553 caacatacaaattaggatttatagaaatttcttttgggaacaaatattaggattgagattgttttgattcaccttgaacaaaacactcttaggatttagt 25562454  T
Q  218 ctctg 222  Q
     ||||    
T  25562453 ttctg 25562449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 26406775 - 26406632
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagatt 177  Q
    ||||||||||||| ||| |||||||||| |||||||||||||||| ||||||||||||||||||| | ||||||||| ||||||||||||||||||||||    
T  26406775 tatcatatgaaaatgtgtgtagaaaacagggtttagaaaccaacaaacaaactagggtttatagagaattctcttggcaacaaacactagggttgagatt 26406676  T
Q  178 gttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||||||||| | ||||||||||||||||    
T  26406675 gttttgattcaccttgaacaaaacattgttaggattgagtctct 26406632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 25837987 - 25838130
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagatt 177  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||| | |||||| |||||||||| | ||||||||| ||||||||||||||||||||||    
T  25837987 tatcatatgaaaacgtgtgtagaaaacaaggtttagaagccaacaaagaaactatggtttatagagaattctcttggtaacaaacactagggttgagatt 25838086  T
Q  178 gttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||    
T  25838087 gttttgattcaccttgaacaaaacactattaggagagagtctct 25838130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 84 - 221
Target Start/End: Complemental strand, 17841546 - 17841408
Alignment:
Q  84 atgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgtttt 182  Q
    |||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||| ||  || ||||||||||||||||||||    
T  17841546 atgataaagtgcgtagaaaacagggtttagaaaccatcatacaaactagggtttatagagaatttctcttggcaaacaatactagggttgagattgtttt 17841447  T
Q  183 gattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  17841446 gattcaccttgaacaaagcactattaggattgagtctct 17841408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 100 - 221
Target Start/End: Complemental strand, 31782738 - 31782616
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaa 198  Q
    |||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  31782738 aaaacagggtttagaagccaacatacaaactagggtttatagataatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 31782639  T
Q  199 aacacttttaggattgagtctct 221  Q
    |||||| ||||||||||||||||    
T  31782638 aacactgttaggattgagtctct 31782616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 2298305 - 2298160
Alignment:
Q  78 tatcatatga-aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgag 174  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |    
T  2298305 tatcatatgataaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttggg 2298207  T
Q  175 attgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  2298206 attgttttgattcaccttgaacaaaacactattaggattgagtctct 2298160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 22672713 - 22672857
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||    
T  22672713 tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttggga 22672811  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  22672812 ttgttttgattcaccttgaacaaagcactattaggattgagtctct 22672857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 35385755 - 35385611
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| ||| |||||||||| |||||||||||||||||||||||| |||||||||||| ||||| | ||||||||| ||    
T  35385755 tatcaaatgataaagtgtgtagaaaaacaaagtttagaaactaacatacaaactagggtttatagagaatttctcttggcaacaa-ctctagggttggga 35385657  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  35385656 ttgttttgattcaccttgaacaaaacactattaggattgagtctct 35385611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 40222642 - 40222786
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||    
T  40222642 tatcagatgataaagtgtgtagaaaaacaaggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgaga 40222740  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||||||||  | | ||||||||||||||||    
T  40222741 ttgttttgattcaccttgaacaaagtattattaggattgagtctct 40222786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 25452384 - 25452518
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||| |||| |||| ||||||||||||    
T  25452384 aaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aactctagcgttgggattgttttgat 25452482  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||| |||| ||||||||||||||||    
T  25452483 tcaccttgaacaaagcactattaggattgagtctct 25452518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 16093575 - 16093450
Alignment:
Q  96 gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga 194  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||  ||||||||||||||||    
T  16093575 gtagaaaacagggtttagaagccaacatacaaactagggtttatagataatttctcttggcaacaaacactagggttgggatctttttgattcaccttga 16093476  T
Q  195 acaaaacacttttaggattgagtctct 221  Q
    | |||||||| ||||||||||||||||    
T  16093475 a-aaaacactattaggattgagtctct 16093450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 1240307 - 1240451
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttatagaaattt-ctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || ||||||||| |||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||| ||    
T  1240307 tatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagatattttctctttgcaacaa-cactagggttggga 1240405  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  1240406 ttgttttgattcaccttgaacaaaacactattaggattgagtctct 1240451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 10627260 - 10627387
Alignment:
Q  96 gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgtttt-gattcaccttg 193  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||||| |||||||||| | ||||||||||||||||  ||||||||| |||||||||||    
T  10627260 gtagaaaacagggtttagaagccaacatacaaactagtgtttatagagaatttctcttagcaacaaacactagggttaggattgtttttgattcaccttg 10627359  T
Q  194 aacaaaacacttttaggattgagtctct 221  Q
    ||||||||||| ||||||||||||||||    
T  10627360 aacaaaacactgttaggattgagtctct 10627387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 25445381 - 25445519
Alignment:
Q  88 aaaagtgcgtaga-aaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| | ||||||||| ||||||||||||    
T  25445381 aaaagtgtgtagataaacaaggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-ctctagggttgggattgttttgat 25445479  T
Q  186 tcaccttgaacaaaacacttt----taggattgagtctct 221  Q
    ||||||||||||||||||| |    |||||||||||||||    
T  25445480 tcaccttgaacaaaacactatctattaggattgagtctct 25445519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 11962717 - 11962592
Alignment:
Q  96 gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga 194  Q
    |||||||||| ||||||||| ||||||||||||||| |||| ||||| |||||||||||| ||||| ||||||||||||||||||||||||||||| |||    
T  11962717 gtagaaaacagggtttagaagccaacatacaaactatggttcatagagaatttctcttggcaacaa-cactagggttgagattgttttgattcaccatga 11962619  T
Q  195 acaaaacacttttaggattgagtctct 221  Q
    ||||| |||| ||||||||| ||||||    
T  11962618 acaaagcactattaggattgtgtctct 11962592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 1170702 - 1170834
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  1170702 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 1170798  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  1170799 tcaccttgaacaaaacactattaggattgagtctct 1170834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 42238188 - 42238298
Alignment:
Q  84 atgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttt 181  Q
    |||| |||||| |||||||| || ||||||||| |||||||||||||||||||||||||| |||||||||| | ||| ||||||||||||| ||||||||    
T  42238188 atgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctctttgcaac-aacactagggttgggattgttt 42238286  T
Q  182 tgattcaccttg 193  Q
    ||||||||||||    
T  42238287 tgattcaccttg 42238298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 221
Target Start/End: Original strand, 28786291 - 28786427
Alignment:
Q  84 atgaaaaagtgcgtagaaaacaagg-tttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttt 181  Q
    ||||||| ||||||||||||  ||| |||||||  |||||||||||| |||||| ||| | || ||||||||  ||||| |||||||||||  |||||||    
T  28786291 atgaaaaggtgcgtagaaaaacaggatttagaaggcaacatacaaacaagggtt-ataaagaacttctcttgc-aacaa-cactagggttggaattgttt 28786387  T
Q  182 tgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||| |||| ||||||||||||||||    
T  28786388 tgattcaccttgaacaaagcactattaggattgagtctct 28786427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 15445493 - 15445430
Alignment:
Q  161 acactagggttgagattgttttgat---tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||||   ||||||||||||||||||| ||||||||||||||||    
T  15445493 acactagggttgagattgttttgatatttcaccttgaacaaaacactgttaggattgagtctct 15445430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 4897792 - 4897844
Alignment:
Q  165 tagggttgagattgttttgattcaccttgaacaaaacacttttaggattgagt 217  Q
    |||||||||||||||||| |||||||||||||||| |||| ||||||||||||    
T  4897792 tagggttgagattgttttcattcaccttgaacaaatcactgttaggattgagt 4897844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 35314703 - 35314779
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagat 176  Q
    |||||| ||||||||||| ||   ||||||||| ||||||||   |||||||||| |||||||||||||||||||||    
T  35314703 aaaacagggtttagaaacaaaacaacaaactagagtttataggggtttctcttggcaacaaacactagggttgagat 35314779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 178
Target Start/End: Original strand, 4754166 - 4754237
Alignment:
Q  107 ggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    |||||| || |||||| | | |||||||||| ||||  || ||||||| |||||||||||||||||||||||    
T  4754166 ggtttaaaagccaacacaaacactagggtttgtagagtttgctcttggcaacaaacactagggttgagattg 4754237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 221
Target Start/End: Original strand, 13295823 - 13295858
Alignment:
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||| ||||||||||||||||||||||||||||||    
T  13295823 tcaccatgaacaaaacacttttaggattgagtctct 13295858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 221
Target Start/End: Original strand, 13294711 - 13294812
Alignment:
Q  126 aaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttt------tgattcaccttgaacaaaacacttttaggattgagtct 219  Q
    ||||||| |||| |||| | ||||||||| ||||| ||||||||||| |||||  |      ||||| ||||||||||||||||| |||||||||| |||    
T  13294711 aaactagagtttgtagagaattctcttggcaacaagcactagggttgggattgaatcaccattgatttaccttgaacaaaacactattaggattgattct 13294810  T
Q  220 ct 221  Q
    ||    
T  13294811 ct 13294812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 29748349 - 29748423
Alignment:
Q  98 agaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggtt 171  Q
    ||||||||||| ||||||| ||||||   |||||||||||| |||| | ||||||||| |||||||| |||||||    
T  29748349 agaaaacaagggtttagaagccaacaagaaaactagggtttgtagagaattctcttggcaacaaacagtagggtt 29748423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 3e-50; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 25351233 - 25351376
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat 176  Q
    ||||| |||| |||||| |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||    
T  25351233 tatcagatgataaagtgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgagat 25351331  T
Q  177 tgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  25351332 tgttttgattcaccttgaacaaaacactattaggattgagtctct 25351376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 25356927 - 25357070
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat 176  Q
    ||||| |||| |||||| |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||    
T  25356927 tatcagatgataaagtgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgagat 25357025  T
Q  177 tgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  25357026 tgttttgattcaccttgaacaaaacactattaggattgagtctct 25357070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 25410010 - 25410153
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat 176  Q
    ||||| |||| |||||| |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||    
T  25410010 tatcagatgataaagtgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggat 25410108  T
Q  177 tgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  25410109 tgttttgattcaccttgaacaaaacactattaggattgagtctct 25410153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 21369539 - 21369665
Alignment:
Q  96 gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga 194  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||| || ||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  21369539 gtagaaaacagggtttagaagccaacatacaaactagggtttatagagaaattctcttggcaacaaacattagggttgagattgttttgattcaccttga 21369638  T
Q  195 acaaaacacttttaggattgagtctct 221  Q
    |||||||||| ||||||||||||||||    
T  21369639 acaaaacactattaggattgagtctct 21369665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 44016946 - 44016820
Alignment:
Q  96 gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga 194  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  44016946 gtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttga 44016847  T
Q  195 acaaaacacttttaggattgagtctct 221  Q
    ||||| |||| ||||||||||||||||    
T  44016846 acaaagcactattaggattgagtctct 44016820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 8378797 - 8378663
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| | ||||||||| ||||||||||||    
T  8378797 aaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-ctctagggttgggattgttttgat 8378699  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||| ||||||||||||    
T  8378698 tcaccttgaacaaaacactattaagattgagtctct 8378663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 34547166 - 34547022
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||    
T  34547166 tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttggga 34547068  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||| | |||| ||||||||||||||||    
T  34547067 ttgttttgattcaccttgaacagagcactattaggattgagtctct 34547022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 89 - 221
Target Start/End: Complemental strand, 44144157 - 44144025
Alignment:
Q  89 aaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattc 187  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| ||||| ||||||||||  ||||||||||||||    
T  44144157 aaagtgtgtagaaaacaaggtttagaagccaacatacaaactagggtttatagagaatttttcttggcaacaa-cactagggttatgattgttttgattc 44144059  T
Q  188 accttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||| |||| ||||||||||||||||    
T  44144058 accttgaacaaagcactattaggattgagtctct 44144025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 44011035 - 44010909
Alignment:
Q  96 gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga 194  Q
    |||||||||| ||||||||| ||||||||||||||| |||||||||| ||||| |||||| ||||||||||||||||| |||||||||||| ||||||||    
T  44011035 gtagaaaacagggtttagaagccaacatacaaactatggtttatagagaatttttcttggcaacaaacactagggttgggattgttttgatccaccttga 44010936  T
Q  195 acaaaacacttttaggattgagtctct 221  Q
    ||||| |||| ||||||||||||||||    
T  44010935 acaaagcactattaggattgagtctct 44010909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 6067503 - 6067359
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagatt 177  Q
    ||||| ||||||| ||| | |||||||| ||||||||| |||||| ||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||    
T  6067503 tatcagatgaaaacgtgtgaagaaaacatggtttagaagccaacaaacaaactagggtttatagagaattctcttggtaacaaacactagggttgggatt 6067404  T
Q  178 g-ttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    | |||||||||||||||||||||||| |  ||||||| |||||||    
T  6067403 gtttttgattcaccttgaacaaaacattgataggatttagtctct 6067359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 221
Target Start/End: Complemental strand, 7464815 - 7464677
Alignment:
Q  84 atgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttt 181  Q
    |||| |||||| |||||||| || |||||| || |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||  ||||||||    
T  7464815 atgataaagtgtgtagaaaaacagggtttaaaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggtttggattgttt 7464717  T
Q  182 tgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||| |||| ||||||||||||||||    
T  7464716 tgattcaccttgaacaaagcactattaggattgagtctct 7464677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 42006565 - 42006686
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttatagaaa-tttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaa 198  Q
    |||||| ||||||||| |||||| |||||||| |||||||||||| |||||||||| || || ||||||||||| |||||||||||||||||||||||||    
T  42006565 aaaacagggtttagaagccaacaaacaaactatggtttatagaaaatttctcttggcaagaa-cactagggttgggattgttttgattcaccttgaacaa 42006663  T
Q  199 aacacttttaggattgagtctct 221  Q
    |||||| ||||||||||||||||    
T  42006664 aacactattaggattgagtctct 42006686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 7069671 - 7069803
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  7069671 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 7069767  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  7069768 tcaccttgaacaaaacactattaggattgagtctct 7069803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 7074678 - 7074810
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  7074678 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 7074774  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  7074775 tcaccttgaacaaaacactattaggattgagtctct 7074810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 15541286 - 15541154
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  15541286 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 15541190  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  15541189 tcaccttgaacaaaacactattaggattgagtctct 15541154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 25405284 - 25405416
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  25405284 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 25405380  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  25405381 tcaccttgaacaaaacactattaggattgagtctct 25405416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 2120800 - 2120922
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgtt-ttgattcaccttgaaca 197  Q
    |||||||||||||||| |||||||||||||||||||||||||| | |||||||||| ||| ||| ||||||||| ||||||| ||||||||||||| |||    
T  2120800 aaaacaaggtttagaagccaacatacaaactagggtttatagagattttctcttggcaac-aactctagggttgggattgttgttgattcaccttggaca 2120898  T
Q  198 aaacacttttaggattgagtctct 221  Q
    ||||||| ||||||||||||||||    
T  2120899 aaacactattaggattgagtctct 2120922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 84 - 221
Target Start/End: Complemental strand, 44512822 - 44512684
Alignment:
Q  84 atgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactaggg-ttgagattgttt 181  Q
    |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| | || |||| | ||||| |||||||| ||| ||||||||    
T  44512822 atgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaattttctttgcaacaa-cactaggggttgggattgttt 44512724  T
Q  182 tgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||| |||| ||||||||||||||||    
T  44512723 tgattcaccttgaacaaagcactattaggattgagtctct 44512684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 221
Target Start/End: Complemental strand, 1099697 - 1099593
Alignment:
Q  117 ccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaaacacttttaggattga 215  Q
    |||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  1099697 ccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgaaattgttttgattcacgttgaacaaaacactattaggattga 1099599  T
Q  216 gtctct 221  Q
     |||||    
T  1099598 ctctct 1099593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 30246872 - 30246993
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaa 198  Q
    |||||| ||||||||| ||||||   ||||||||||||||||| |||||||||||| ||||| ||||| ||||| |||||||||||||||||||||||||    
T  30246872 aaaacagggtttagaagccaacaacaaaactagggtttatagagaatttctcttggcaacaa-cactacggttgggattgttttgattcaccttgaacaa 30246970  T
Q  199 aacacttttaggattgagtctct 221  Q
    | |||| ||||||||||||||||    
T  30246971 agcactattaggattgagtctct 30246993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 3320341 - 3320209
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||   ||||| ||||||||||||||||||| ||| ||| |||| ||||| | ||||||||| ||||||||||||    
T  3320341 aaaagtgtgtagaaaaacaaggtttagat--caacaaacaaactagggtttatagagaatctctattggcaacaa-ctctagggttgggattgttttgat 3320245  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  3320244 tcaccttgaacaaaacactattaggattgagtctct 3320209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 3325089 - 3324957
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||   ||||| ||||||||||||||||||| ||| ||| |||| ||||| | ||||||||| ||||||||||||    
T  3325089 aaaagtgtgtagaaaaacaaggtttagat--caacaaacaaactagggtttatagagaatctctattggcaacaa-ctctagggttgggattgttttgat 3324993  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  3324992 tcaccttgaacaaaacactattaggattgagtctct 3324957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 11081520 - 11081600
Alignment:
Q  99 gaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    |||||||||| ||||||| ||||||   |||||||||||| |||| | ||||||||| |||||||||||||||||||||||    
T  11081520 gaaaacaagggtttagaagccaacaacaaaactagggtttgtagagaattctcttggcaacaaacactagggttgagattg 11081600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 45366544 - 45366656
Alignment:
Q  101 aaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaaa 200  Q
    |||||||||||||||  ||||| ||||||||| |||||||||  ||||| |||| ||||||||||||||||| ||||       ||| ||||||||||||    
T  45366544 aaacaaggtttagaagtcaaca-acaaactagagtttatagagttttcttttggcaacaaacactagggttgtgatt-------ttctccttgaacaaaa 45366635  T
Q  201 cacttttaggattgagtctct 221  Q
    |||| ||| ||| ||||||||    
T  45366636 cactgttatgatagagtctct 45366656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 221
Target Start/End: Original strand, 6048882 - 6049000
Alignment:
Q  98 agaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaac 196  Q
    ||||||||||| ||||||| |||||||  |||||||||||| || | | ||||||||| ||||||||||||| ||| ||     |||||||||||||||     
T  6048882 agaaaacaagggtttagaagccaacatcaaaactagggtttgtaaagaattctcttggcaacaaacactaggtttggga-----ttgattcaccttgaa- 6048975  T
Q  197 aaaacacttttaggattgagtctct 221  Q
     ||||||| |||||||||| |||||    
T  6048976 gaaacactattaggattgaatctct 6049000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 11084417 - 11084469
Alignment:
Q  126 aaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    |||||||||||| |||||| ||||||||| |||||||| ||||||||||||||    
T  11084417 aaactagggtttgtagaaaattctcttggcaacaaacaatagggttgagattg 11084469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 197
Target Start/End: Complemental strand, 1099754 - 1099717
Alignment:
Q  160 aacactagggttgagattgttttgattcaccttgaaca 197  Q
    |||||||||||||||||||||||||||||| |||||||    
T  1099754 aacactagggttgagattgttttgattcacgttgaaca 1099717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 6332263 - 6332313
Alignment:
Q  128 actagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    |||||||||||||||  || ||||||| ||||||||||||| |||||||||    
T  6332263 actagggtttatagagtttactcttggcaacaaacactaggattgagattg 6332313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 12310234 - 12310175
Alignment:
Q  156 aacaaacactagggttgagattgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||| ||     |||||||||||||||| ||||||| ||||||||||||||||    
T  12310234 aacaaacactagggttggga-----ttgattcaccttgaac-aaacactattaggattgagtctct 12310175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 13290725 - 13290681
Alignment:
Q  124 acaaactagggtttatagaaatttctcttgggaacaaacactagg 168  Q
    |||||||||||||| ||||  |||||||||| |||||||||||||    
T  13290725 acaaactagggtttgtagagttttctcttggcaacaaacactagg 13290681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 3e-50; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 16638706 - 16638850
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat 176  Q
    ||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||| | ||||||||||||||||| |||    
T  16638706 tatcagatgaaaaagtgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctctttgcaacaaacactagggttgggat 16638805  T
Q  177 tgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||    
T  16638806 tgttttgattcaccttaaacaaaacactgttaggattgagtctct 16638850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 16489229 - 16489372
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat 176  Q
    ||||| |||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||| |||||||||    
T  16489229 tatcagatgataaagtgtgtagaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactaaggttgagat 16489327  T
Q  177 tgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||    
T  16489328 tgttttgattcaccttgaacaaagcactattaggattgagtctct 16489372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 25699629 - 25699772
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat 176  Q
    |||||||||| |||||| |||||||||| |||||| || |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||    
T  25699629 tatcatatgataaagtgtgtagaaaacagggtttaaaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggat 25699727  T
Q  177 tgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||    
T  25699728 tgttttgattcaccttgaacaaagcactattaggattgagtctct 25699772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 47566390 - 47566516
Alignment:
Q  96 gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga 194  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||| ||||    
T  47566390 gtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttatcttggcaacaaacactagggttgagattgttttgattcacattga 47566489  T
Q  195 acaaaacacttttaggattgagtctct 221  Q
    ||||| |||| ||||||||||||||||    
T  47566490 acaaagcactattaggattgagtctct 47566516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 100 - 218
Target Start/End: Original strand, 15312218 - 15312336
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaa 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||    
T  15312218 aaaacaaggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaa 15312316  T
Q  199 aacacttttaggattgagtc 218  Q
    | |||| |||||||||||||    
T  15312317 agcactattaggattgagtc 15312336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 36771293 - 36771419
Alignment:
Q  96 gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga 194  Q
    |||||||| | ||||||||| |||||||||||||||||||||  ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36771293 gtagaaaatagggtttagaagccaacatacaaactagggtttgaagagaatttctcttggcaacaaacactagggttgagattgttttgattcaccttga 36771392  T
Q  195 acaaaacacttttaggattgagtctct 221  Q
    |||||||||| ||| ||||||||||||    
T  36771393 acaaaacactattatgattgagtctct 36771419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 15831020 - 15831164
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttatagaaa-tttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||| ||||||||||| ||    
T  15831020 tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagaaaatttttcttggcaacaa-cactagggttggga 15831118  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  15831119 ttgttttgattcaccttgaacaaatcactattaggattgagtctct 15831164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 18586845 - 18586989
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaagg-tttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| ||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||    
T  18586845 tatcagatgataaagtgtgtagaaaaatagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttggga 18586943  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  18586944 ttgttttgattcaccttgaacaaagcactattaggattgagtctct 18586989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 31300303 - 31300447
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    |||||||||| |||||| |||||||| || ||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| ||||||||||| ||    
T  31300303 tatcatatgataaagtgtgtagaaaaacagggtttagaaaccaacattcaaactagggtttatagagaatttctctttgcaacaa-cactagggttggga 31300401  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  31300402 ttgttttgattcaccttgaacaaagcactattaggattgagtctct 31300447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 4569974 - 4570117
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat 176  Q
    ||||| |||| |||||| ||||||||||  |||||||| |||||||||||||||||||||||||| |||||||||||| ||||  ||||||||||| |||    
T  4569974 tatcagatgataaagtgtgtagaaaacagagtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacat-cactagggttgggat 4570072  T
Q  177 tgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||    
T  4570073 tgttttgattcaccttgaacaaaacactattaggatcgagtctct 4570117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 13072265 - 13072140
Alignment:
Q  96 gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga 194  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||  ||||||||||| |||||||||||||||||||||    
T  13072265 gtagaaaacaaggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacat-cactagggttgggattgttttgattcaccttga 13072167  T
Q  195 acaaaacacttttaggattgagtctct 221  Q
    ||||| |||| ||| ||||||||||||    
T  13072166 acaaatcactattatgattgagtctct 13072140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 100 - 217
Target Start/End: Original strand, 36769380 - 36769498
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaa 198  Q
    |||||||||||||||| |||||||||||||||||||||  ||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  36769380 aaaacaaggtttagaagccaacatacaaactagggtttgaagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 36769479  T
Q  199 aacacttttaggattgagt 217  Q
    |||||| ||||||| ||||    
T  36769480 aacactattaggatcgagt 36769498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 4556362 - 4556218
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||    
T  4556362 tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacttacaaactagggtttatagagaatttctcttggcaacaa-cactagggttggga 4556264  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||| ||||||||||||||||| |||| ||||||||||||||||    
T  4556263 ttgtttcgattcaccttgaacaaagcactattaggattgagtctct 4556218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 8529176 - 8529290
Alignment:
Q  107 ggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaaacactt 205  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||  ||||||||||| |||||||||||||||||||||||||| ||||     
T  8529176 ggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacac-cactagggttgggattgttttgattcaccttgaacaaagcacta 8529274  T
Q  206 ttaggattgagtctct 221  Q
    ||||||||||||||||    
T  8529275 ttaggattgagtctct 8529290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 4558208 - 4558334
Alignment:
Q  96 gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga 194  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||| || | |  |||||||| |||||||    
T  4558208 gtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggctgggttgtttttgatttaccttga 4558307  T
Q  195 acaaaacacttttaggattgagtctct 221  Q
    ||||| |||| ||||||||||||||||    
T  4558308 acaaagcactattaggattgagtctct 4558334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 15316860 - 15316981
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaa 198  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| | ||| ||||||||||  ||||||||||||| |||||||||||    
T  15316860 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcagcaa-cactagggttcggattgttttgatttaccttgaacaa 15316958  T
Q  199 aacacttttaggattgagtctct 221  Q
    | |||| ||||||||||||||||    
T  15316959 agcactattaggattgagtctct 15316981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 25614191 - 25614079
Alignment:
Q  109 tttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaaacactttt 207  Q
    ||||||| ||||||||||| ||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  25614191 tttagaagccaacatacaa-ctatggtttatagagaatttctcttggtaacaaacactagggttgagattgttttgattcacattgaacaaaacactgtt 25614093  T
Q  208 aggattgagtctct 221  Q
    || |||||||||||    
T  25614092 agaattgagtctct 25614079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 11853440 - 11853572
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| | ||||||||||||||||| ||| |||||||| ||||| | ||||||||||||||||||||||    
T  11853440 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaataaactagggtttatagagaatctctcttggcaacaa-ctctagggttgagattgttttgat 11853536  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  11853537 tcaccttgaacaaaacactattaggattgagtctct 11853572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 4884753 - 4884897
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || ||||||||| |||||||||||| ||||||||||||| |||||||||| | ||||| |||| ||| || ||    
T  4884753 tatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaattagggtttatagagaatttctctttgcaacaa-cactgggggtggga 4884851  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  4884852 ttgttttgattcaccttgaacaaagcactattaggattgagtctct 4884897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 16689243 - 16689099
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || ||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| | ||||| |||  |    
T  16689243 tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacattcaaactagggtttatagataatttctctttgcaacaa-ctctaggtttggaa 16689145  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  16689144 ttgttttgattcaccttgaacaaagcactattaggattgagtctct 16689099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 124 - 212
Target Start/End: Original strand, 26557664 - 26557752
Alignment:
Q  124 acaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaaacacttttaggat 212  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  26557664 acaaactagggtttatagagatttctcttggcaacaaacactagggttgggattgttttgattcaccttaaacaaaacactattaggat 26557752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 55822169 - 55822288
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaa 198  Q
    |||||||||||||||  |||||| ||||| ||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||||||||||||||||    
T  55822169 aaaacaaggtttaga--ccaacaaacaaattagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaa 55822265  T
Q  199 aacacttttaggattgagtctct 221  Q
    |||||| ||||||||||||||||    
T  55822266 aacactattaggattgagtctct 55822288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 7050511 - 7050416
Alignment:
Q  126 aaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||| |||||||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7050511 aaactagggtttatagagaatttctcttggcaacaa-cactaaggttgtgattgttttgattcaccttgaacaaaacactattaggattgagtctct 7050416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 100 - 195
Target Start/End: Complemental strand, 32274181 - 32274087
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaa 195  Q
    |||||||||||||||| |||||| ||||||||| ||||||||| |||||| |||| |||||||||||| |||||||||||||||||||||||||||    
T  32274181 aaaacaaggtttagaagccaaca-acaaactagagtttatagagatttctattggcaacaaacactagagttgagattgttttgattcaccttgaa 32274087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 221
Target Start/End: Complemental strand, 4874759 - 4874638
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaa 199  Q
    |||||||||||||||| |||||| |||||||||| |||| ||| | |||||| |  |||||||||||| |||| | ||||||||||||||||||| ||||    
T  4874759 aaaacaaggtttagaagccaacaaacaaactaggatttaaagagaattctctagacaacaaacactagagttgggtttgttttgattcaccttgatcaaa 4874660  T
Q  200 acacttttaggattgagtctct 221  Q
    ||||| ||| ||| ||||||||    
T  4874659 acactattaagatagagtctct 4874638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 3982450 - 3982342
Alignment:
Q  107 ggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaaacacttt 206  Q
    |||| |||||| |||| ||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||| |||||||||| |  ||||||| |    
T  3982450 ggttcagaaacaaaca-acaaactagggttcatagtgatttctcttggcaacaaacactagggttgagattgtttttattcaccttgga-gaaacactat 3982353  T
Q  207 taggattgagt 217  Q
    |||||||||||    
T  3982352 taggattgagt 3982342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 221
Target Start/End: Complemental strand, 16186108 - 16185995
Alignment:
Q  107 ggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaaacacttt 206  Q
    ||||||||||| |||| ||||||||||||||| ||| ||||||||  |    | |||||| ||||| ||||||||||||||||||||||||||||||| |    
T  16186108 ggtttagaaacaaaca-acaaactagggtttagagagatttctctaagcgggagacactaaggttgggattgttttgattcaccttgaacaaaacactgt 16186010  T
Q  207 taggattgagtctct 221  Q
    |||||||||||||||    
T  16186009 taggattgagtctct 16185995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 5337035 - 5336941
Alignment:
Q  129 ctagggtttatagaaatttctcttgggaacaaacactag--ggttgagattgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||| | |||| |||| |||||||||||   ||||||||||||||||| |||||||||| |||||||| ||||||||||||||||    
T  5337035 ctagggtttatagagaattctattggcaacaaacactatatggttgagattgttttgactcaccttgaataaaacactgttaggattgagtctct 5336941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 10112925 - 10113005
Alignment:
Q  99 gaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    |||||||||| ||||||| |||||| | |||||||||||| ||||  || ||||||| |||||||||||||||||||||||    
T  10112925 gaaaacaagggtttagaagccaacacaaaaactagggtttgtagagtttgctcttggcaacaaacactagggttgagattg 10113005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 38208961 - 38208880
Alignment:
Q  98 agaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    ||||||||||| ||||||| |||||||   | |||| |||| |||||| ||||||||| |||||||||||||||||||||||    
T  38208961 agaaaacaagggtttagaagccaacatcatatctagcgtttgtagaaaattctcttggcaacaaacactagggttgagattg 38208880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 9022359 - 9022440
Alignment:
Q  98 agaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    ||||||||||| |||||||  ||||||  |||||||||||| |||| | ||||||||| ||||||||||| ||||| |||||    
T  9022359 agaaaacaagggtttagaagtcaacatcaaaactagggtttgtagagaattctcttggcaacaaacactatggttgggattg 9022440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 23001660 - 23001582
Alignment:
Q  100 aaaacaaggtttagaaaccaac-atacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    ||||||||| |||||| ||||| ||| ||||||||||||||||| |||||| |||  ||||| ||||||| |||||||||    
T  23001660 aaaacaaggattagaagccaaccata-aaactagggtttatagagatttcttttgacaacaatcactaggattgagattg 23001582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 5516531 - 5516453
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    ||||||| | |||||| ||||||   ||| |||||||| |||| |||||| |||| ||||||||||||||||| |||||    
T  5516531 aaaacaaagcttagaatccaacaacaaaaatagggtttgtagagatttcttttggcaacaaacactagggttgggattg 5516453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 52043660 - 52043579
Alignment:
Q  98 agaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    ||||||||||| ||||||| |||||||  |||||| ||||| ||||  |||||||||  | ||||||||||||||| |||||    
T  52043660 agaaaacaagggtttagaagccaacatcaaaactaaggtttgtagagttttctcttgtcagcaaacactagggttgggattg 52043579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 47151169 - 47151090
Alignment:
Q  99 gaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    |||||||||| ||||||| |||||| | |||||| ||||||||||  || ||||||| ||| |||||||||||||| ||||    
T  47151169 gaaaacaagggtttagaagccaacaca-aaactaaggtttatagagtttgctcttggtaaccaacactagggttgaaattg 47151090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 5e-49; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 30423109 - 30423235
Alignment:
Q  96 gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga 194  Q
    |||||||||| ||||||||| |||||| ||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  30423109 gtagaaaacagggtttagaagccaacaaacaaactagggtttatagagaatttctcttggcaacaaacactagggctgagattgttttgattcaccttga 30423208  T
Q  195 acaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||||||    
T  30423209 acaaaacacttttaggattgagtctct 30423235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 2267326 - 2267182
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat 176  Q
    ||||| ||||| | ||| |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||    
T  2267326 tatcagatgaatatgtgtgtagaaaacatggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactacggttgagat 2267227  T
Q  177 tgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||    
T  2267226 tgttttgattcacgttgaacaaaacactgttaggattgagtctct 2267182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 28895404 - 28895525
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaa 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| | |||||||||||||||||||||||||||||||||||    
T  28895404 aaaacaaggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-ctctagggttgagattgttttgattcaccttgaacaa 28895502  T
Q  199 aacacttttaggattgagtctct 221  Q
    |||||| ||||||||||||||||    
T  28895503 aacactattaggattgagtctct 28895525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 33032552 - 33032677
Alignment:
Q  96 gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga 194  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  33032552 gtagaaaacatggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgagattgttttgattcaccttga 33032650  T
Q  195 acaaaacacttttaggattgagtctct 221  Q
    ||||| |||| ||||||||||||||||    
T  33032651 acaaagcactattaggattgagtctct 33032677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 9021410 - 9021266
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||  ||    
T  9021410 tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctctttgcaacaa-cactagggttcgga 9021312  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  9021311 ttgttttgattcaccttgaacaaaacactattaggattgagtctct 9021266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 21033749 - 21033893
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||||| ||| ||    
T  21033749 tatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagataatttctcttggcaacaa-cactaggcttggga 21033847  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  21033848 ttgttttgattcaccttgaacaaaacactattaggattgagtctct 21033893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 590696 - 590817
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaa 198  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||| |||||| |||||||||||||||||||||||||    
T  590696 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cacttgggttgggattgttttgattcaccttgaacaa 590794  T
Q  199 aacacttttaggattgagtctct 221  Q
    | |||| ||||||||||||||||    
T  590795 agcactattaggattgagtctct 590817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 100 - 221
Target Start/End: Complemental strand, 23179841 - 23179720
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaa 198  Q
    |||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||    
T  23179841 aaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaa 23179743  T
Q  199 aacacttttaggattgagtctct 221  Q
    | |||| ||||||||||||||||    
T  23179742 agcactattaggattgagtctct 23179720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 29555088 - 29554944
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || ||||||||||||| ||||||||||||||||| |||| |||||||||||| ||||| ||||||||||| ||    
T  29555088 tatcagatgataaagtgtgtagaaaaacagggtttagaaaccatcatacaaactagggtttttagagaatttctcttggcaacaa-cactagggttggga 29554990  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  29554989 ttgttttgattcaccttgaacaaagcactattaggattgagtctct 29554944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 17799708 - 17799583
Alignment:
Q  96 gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga 194  Q
    |||||||||| ||||||||| ||||||||||||||||| |||||||| ||||| ||| || ||||| ||||||||||| |||||||||||||||||||||    
T  17799708 gtagaaaacagggtttagaagccaacatacaaactaggatttatagagaatttgtctaggcaacaa-cactagggttgggattgttttgattcaccttga 17799610  T
Q  195 acaaaacacttttaggattgagtctct 221  Q
    |||||||||| ||||||||||||||||    
T  17799609 acaaaacactattaggattgagtctct 17799583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 100 - 215
Target Start/End: Complemental strand, 26268510 - 26268395
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaa 198  Q
    |||||||||||||||| || ||||||||||||||||||||||| |||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||    
T  26268510 aaaacaaggtttagaagcctacatacaaactagggtttatagagaatttctcttggcaacaa-cactagagttgagattgttttgattcaccttgaacaa 26268412  T
Q  199 aacacttttaggattga 215  Q
    |||||| ||| ||||||    
T  26268411 aacactattaagattga 26268395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 28327799 - 28327931
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  28327799 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 28327895  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  28327896 tcaccttgaacaaaacactattaggattgagtctct 28327931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 100 - 221
Target Start/End: Complemental strand, 16752800 - 16752681
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaa 198  Q
    |||||||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||||||||||||||||    
T  16752800 aaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaa 16752704  T
Q  199 aacacttttaggattgagtctct 221  Q
    |||||| ||||||||||||||||    
T  16752703 aacactattaggattgagtctct 16752681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 17847581 - 17847701
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaa 199  Q
    |||||||||||||||||  |||| |||||||| |||||||||| |||||||| || ||||||||||| ||||| ||||||||||||||||||||||| ||    
T  17847581 aaaacaaggtttagaaatgaaca-acaaactaaggtttatagagatttctctaggcaacaaacactatggttgggattgttttgattcaccttgaacgaa 17847679  T
Q  200 acacttttaggattgagtctct 221  Q
    ||||| |||||||||| |||||    
T  17847680 acactattaggattgaatctct 17847701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 221
Target Start/End: Complemental strand, 16757545 - 16757426
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaa 198  Q
    |||||||||||||||  |||||| ||||||||||||||||||| ||| |||||||  ||||| | ||||||||| |||||||||||||||||||||||||    
T  16757545 aaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttgacaacaa-ctctagggttgggattgttttgattcaccttgaacaa 16757449  T
Q  199 aacacttttaggattgagtctct 221  Q
    |||||| ||||||||||||||||    
T  16757448 aacactattaggattgagtctct 16757426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 88 - 219
Target Start/End: Complemental strand, 4812778 - 4812648
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||| ||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  4812778 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggttcatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 4812682  T
Q  186 tcaccttgaacaaaacacttttaggattgagtct 219  Q
    ||||||||||||||||||| ||||||||||||||    
T  4812681 tcaccttgaacaaaacactattaggattgagtct 4812648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 28332522 - 28332654
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||| | ||||||||||||||||| | ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  28332522 aaaagtgtgtagaaaaacaaggtttaga--ccaataaacaaactagggtttataaagaatctctcttggtaacaa-ctctagggttgggattgttttgat 28332618  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  28332619 tcaccttgaacaaaacactattaggattgagtctct 28332654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 25684534 - 25684666
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||| | ||||| | ||||||||| ||||||||||||    
T  25684534 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttagcaacaa-ctctagggttgggattgttttgat 25684630  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||| |||| |||||||||| |||||    
T  25684631 tcaccttgaacaaatcactattaggattgaatctct 25684666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 15949436 - 15949557
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaa 199  Q
    |||||| |||||| || |||||| ||||||||||||||| ||| | |||||||   ||||||||||||| ||| |||||||| |||||||||||||||||    
T  15949436 aaaacagggtttaaaagccaacacacaaactagggtttacagagaattctctttacaacaaacactaggtttgtgattgtttggattcaccttgaacaaa 15949535  T
Q  200 acacttttaggattgagtctct 221  Q
    ||||| |||||||  |||||||    
T  15949536 acactattaggatatagtctct 15949557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 221
Target Start/End: Original strand, 3276229 - 3276367
Alignment:
Q  84 atgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttt 181  Q
    |||| |||||| |||||||| || ||||||||| |||||| | ||||||||||||||||| ||||| |||| | ||||| | | ||||||| ||||||||    
T  3276229 atgataaagtgtgtagaaaaacagggtttagaagccaacacaaaaactagggtttatagagaatttttctttgcaacaa-ctccagggttgggattgttt 3276327  T
Q  182 tgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||| |||||||||||| |||| ||||||||||||||||    
T  3276328 tgatttaccttgaacaaagcactattaggattgagtctct 3276367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 100 - 194
Target Start/End: Original strand, 15944775 - 15944869
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttga 194  Q
    |||||| ||||||||| | |||| ||||| ||||||||||||| |  |||||||| ||||||||||||||||  ||||| |||||||||||||||    
T  15944775 aaaacagggtttagaagctaacaaacaaattagggtttatagagaaatctcttggcaacaaacactagggttctgattgctttgattcaccttga 15944869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 28228416 - 28228537
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaa 199  Q
    |||||| |||||||||  ||||| | |||||| |||||||||| | |||| |||| ||||||||||| ||||   | |||| | ||||||||||||||||    
T  28228416 aaaacatggtttagaaggcaacaaataaactaaggtttatagagaattcttttggcaacaaacactatggttagaactgttgttattcaccttgaacaaa 28228515  T
Q  200 acacttttaggattgagtctct 221  Q
    ||||| ||||||| ||| ||||    
T  28228516 acactattaggatagagactct 28228537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 6376042 - 6376164
Alignment:
Q  99 gaaaacaaggttta-gaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaaca 197  Q
    |||||||||| ||| ||||| |||| ||||||||||||||| ||| ||||||||  |    | ||||||| |||   |||||||||||||||||||||||    
T  6376042 gaaaacaagggttatgaaacaaaca-acaaactagggtttagagagatttctctaagcgggagacactagagtttgaattgttttgattcaccttgaaca 6376140  T
Q  198 aaacacttttaggattgagtctct 221  Q
    ||||||| ||| ||||||||||||    
T  6376141 aaacactgttaagattgagtctct 6376164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 33021170 - 33021079
Alignment:
Q  108 gtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaaca---ctagggttgagattgttttgattcaccttgaacaa 198  Q
    |||||||||| |||| |||||||||| |||||| | ||||||||| | ||||||||   ||||| |||||||||||||||||||||||||||||    
T  33021170 gtttagaaacaaaca-acaaactagg-tttatatagatttctcttagcaacaaacaacactaggattgagattgttttgattcaccttgaacaa 33021079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 31573995 - 31573922
Alignment:
Q  105 aaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    ||||||||||| ||||||   |||||||| ||| ||||  |||||||||| ||||||||||| ||||| |||||    
T  31573995 aaggtttagaagccaacacgaaaactaggatttgtagagttttctcttggcaacaaacactatggttgggattg 31573922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 13985278 - 13985239
Alignment:
Q  181 ttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  13985278 ttgattcaccttgaa-aaaacactattaggattgagtctct 13985239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 8e-48; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 3091409 - 3091265
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat 176  Q
    ||||| ||||| | ||| |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  3091409 tatcagatgaatatgtgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggtaacaaacactagggttgagat 3091310  T
Q  177 tgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||||||   |||||||||||||||    
T  3091309 tgttttgattcaccttgaacaaaacaccgctaggattgagtctct 3091265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 4144967 - 4144842
Alignment:
Q  96 gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga 194  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  4144967 gtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaa-aaacactagggttgagattgttttgattcaccttga 4144869  T
Q  195 acaaaacacttttaggattgagtctct 221  Q
    |||||||||| ||||||||||||||||    
T  4144868 acaaaacactattaggattgagtctct 4144842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 87 - 221
Target Start/End: Original strand, 14996929 - 14997063
Alignment:
Q  87 aaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgatt 186  Q
    |||||||| |||||||||| ||||||||| |||||| ||||||||||||||||| | | ||||||||| || |||||||||||||| ||||||||| |||    
T  14996929 aaaaagtgtgtagaaaacagggtttagaagccaacaaacaaactagggtttataaagaattctcttggtaataaacactagggttgggattgtttttatt 14997028  T
Q  187 caccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||| ||||||||||||||||    
T  14997029 caccttgaacaaaacactgttaggattgagtctct 14997063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 9526345 - 9526489
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| | ||||||||| ||    
T  9526345 tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-ctctagggttggga 9526443  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  9526444 ttgttttgattcaccttgaacaaagcactattaggattgagtctct 9526489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 25133951 - 25134094
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat 176  Q
    ||||| |||| ||| || |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||| ||||| |||    
T  25133951 tatcagatgataaaatgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactatggttgtgat 25134049  T
Q  177 tgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||    
T  25134050 tgttttgattcaccttgaacaaatcactattaggattgagtctct 25134094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 21353649 - 21353505
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||    
T  21353649 tatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggtaacaa-cactagggttggga 21353551  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||    
T  21353550 ttgttttgattcaccttgaacaacgcactattaggattgagtctct 21353505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 2393584 - 2393441
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat 176  Q
    ||||| ||||||||  | |||||||||||||||||||| ||||||| ||||||| |||||||||| |||||||||||| || || ||||||||||| |||    
T  2393584 tatcagatgaaaaacagagtagaaaacaaggtttagaagccaacatgcaaactaaggtttatagagaatttctcttggcaataa-cactagggttgggat 2393486  T
Q  177 tgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||    
T  2393485 tgttttgattcaccttgaacaaagcactattaggattgagtctct 2393441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 9521604 - 9521738
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    ||||||||| ||||||||||||    
T  9521604 aaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaatttctcttggtaacattt-ctagggttgggattgttttgat 9521702  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||| |||| ||||||||||||||||    
T  9521703 tcaccttgaacaaagcactattaggattgagtctct 9521738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 2232488 - 2232620
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| |  |||||||| ||||||||||||    
T  2232488 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctttagggttgggattgttttgat 2232584  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  2232585 tcaccttgaacaaaacactattaggattgagtctct 2232620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 46783052 - 46783166
Alignment:
Q  107 ggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaaacacttt 206  Q
    ||||||||| |||||| |||||||| |||||||||| | || |||| | ||||||||||||||||||||| |||||||||||||||||||||| |||| |    
T  46783052 ggtttagaagccaacaaacaaactatggtttatagagaattatctttgcaacaaacactagggttgagatcgttttgattcaccttgaacaaagcactgt 46783151  T
Q  207 taggattgagtctct 221  Q
    |||||| ||| ||||    
T  46783152 taggatagagactct 46783166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 133 - 221
Target Start/End: Complemental strand, 2401468 - 2401380
Alignment:
Q  133 ggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  2401468 ggtttatagagaatttctcttggcaacaa-cactagggttgagattgttttgattcaccttgaacaaagcactattaggattgagtctct 2401380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 14352964 - 14353038
Alignment:
Q  104 caaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    ||||| |||||| ||||||   |||||||||||| |||| ||||||||||| ||||||||||||| |||||||||    
T  14352964 caaggattagaagccaacaacaaaactagggtttgtagagatttctcttggcaacaaacactaggtttgagattg 14353038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 13785531 - 13785483
Alignment:
Q  127 aactagggtttatagaaatttctcttgggaacaaacactagggttgaga 175  Q
    ||||||||||| |||| ||||||||||| ||||||||||||| ||||||    
T  13785531 aactagggtttgtagagatttctcttggcaacaaacactaggattgaga 13785483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 202
Target Start/End: Complemental strand, 20566947 - 20566847
Alignment:
Q  99 gaaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaa 198  Q
    ||||||| ||||||||| | |||| |||||||| |||| |||||  |||||||||   |||||||||||||||  |||| |||||||||||||| ||| |    
T  20566947 gaaaacagggtttagaagcaaaca-acaaactaaggttaataga--tttctcttgacgacaaacactagggttaggattattttgattcaccttaaacta 20566851  T
Q  199 aaca 202  Q
    ||||    
T  20566850 aaca 20566847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 1e-46; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 19702147 - 19702021
Alignment:
Q  96 gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga 194  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  19702147 gtagaaaacaaggtttagaagccaacatacaaactagcgtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttga 19702048  T
Q  195 acaaaacacttttaggattgagtctct 221  Q
    ||||| |||| ||||||||||||||||    
T  19702047 acaaagcactattaggattgagtctct 19702021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 17695154 - 17695010
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||| ||    
T  17695154 tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaaa-actagggttggga 17695056  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  17695055 ttgttttgattcaccttgaacaaagcactattaggattgagtctct 17695010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 3577817 - 3577673
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || |||||| ||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||| ||    
T  3577817 tatcagatgataaagtgtgtagaaaaacagggtttaaaaaccaacatacaaactagggtttatagagaatttctctttgcaacaa-cactagggttggga 3577719  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  3577718 ttgttttgattcaccttgaacaaaacactattaggattgagtctct 3577673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 25466202 - 25466058
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||| ||||||||    
T  25466202 tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactaaggttgaga 25466104  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||| || | ||||||||||||||||    
T  25466103 ttgttttgattcaccttgaacaaagcattattaggattgagtctct 25466058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 22343104 - 22342960
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    |||||||||| |||||| |||||||| || ||||||||| |||||||||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||    
T  22343104 tatcatatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaatctctcttggcaacaa-cactagggttgaga 22343006  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||| |||||||||| |||| ||||||||| ||||||    
T  22343005 ttgttttgattcaacttgaacaaagcactattaggattgcgtctct 22342960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 22352155 - 22352011
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||    
T  22352155 tatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttggga 22352057  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||| |||||||||||||| |||| ||||||||||||||||    
T  22352056 ttgttttgaatcaccttgaacaaagcactattaggattgagtctct 22352011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 13467766 - 13467622
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || ||||||||| |||||||||||||||||||||||||| ||||| |||| | ||||| ||||||||||| ||    
T  13467766 tatcaaatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaatttatctttgcaacaa-cactagggttggga 13467668  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  13467667 ttgttttgattcaccttgaacaaagcactattaggattgagtctct 13467622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 97 - 221
Target Start/End: Original strand, 26643075 - 26643199
Alignment:
Q  97 tagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaa 195  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||   |||| ||||||||||| |||||||||||||||||| |||    
T  26643075 tagaaaacaaggtttagaagccaacatacaaactagggtttatagagaatttctcttgcccacaa-cactagggttgggattgttttgattcacctcgaa 26643173  T
Q  196 caaaacacttttaggattgagtctct 221  Q
    |||| |||| ||||||||||||||||    
T  26643174 caaatcactattaggattgagtctct 26643199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 97 - 221
Target Start/End: Original strand, 26749041 - 26749165
Alignment:
Q  97 tagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaa 195  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||   |||| ||||||||||| |||||||||||||||||| |||    
T  26749041 tagaaaacaaggtttagaagccaacatacaaactagggtttatagagaatttctcttgcccacaa-cactagggttgggattgttttgattcacctcgaa 26749139  T
Q  196 caaaacacttttaggattgagtctct 221  Q
    |||| |||| ||||||||||||||||    
T  26749140 caaatcactattaggattgagtctct 26749165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 100 - 220
Target Start/End: Complemental strand, 24542953 - 24542834
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaa 199  Q
    |||| ||||||||||| ||||||  ||||||| |||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||    
T  24542953 aaaataaggtttagaagccaacac-caaactatggtttatagagatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaataaa 24542855  T
Q  200 acacttttaggattgagtctc 220  Q
    ||||||||||||| |||||||    
T  24542854 acacttttaggatagagtctc 24542834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 117 - 221
Target Start/End: Original strand, 17035974 - 17036078
Alignment:
Q  117 ccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaaacacttttaggattga 215  Q
    |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| |||| ||||||||||    
T  17035974 ccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaaagcactattaggattga 17036072  T
Q  216 gtctct 221  Q
    ||||||    
T  17036073 gtctct 17036078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 13878618 - 13878750
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  13878618 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 13878714  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  13878715 tcaccttgaacaaaacactattaggattgagtctct 13878750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 13883366 - 13883498
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  13883366 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 13883462  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  13883463 tcaccttgaacaaaacactattaggattgagtctct 13883498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 16785810 - 16785942
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  16785810 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 16785906  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16785907 tcaccttgaacaaaacactattaggattgagtctct 16785942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 31249005 - 31248873
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  31249005 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 31248909  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  31248908 tcaccttgaacaaaacactattaggattgagtctct 31248873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 35201617 - 35201485
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  35201617 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 35201521  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  35201520 tcaccttgaacaaaacactattaggattgagtctct 35201485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 100 - 221
Target Start/End: Complemental strand, 26887502 - 26887383
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaa 198  Q
    |||||||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||||||||||||||||    
T  26887502 aaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaa 26887406  T
Q  199 aacacttttaggattgagtctct 221  Q
    |||||| ||||||||||||||||    
T  26887405 aacactattaggattgagtctct 26887383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 84 - 221
Target Start/End: Original strand, 33215712 - 33215850
Alignment:
Q  84 atgaaaaagtgcgtagaaaacaag-gtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttt 181  Q
    |||| |||||| ||||||||  || |||||||| |||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||| ||||||||    
T  33215712 atgataaagtgtgtagaaaaacagagtttagaagccaacatacaaactagggtttatagagaatttctctttgcaacaa-cactagggttgtgattgttt 33215810  T
Q  182 tgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||| ||| |||| ||||||||||||||||    
T  33215811 tgattcaccttgaataaagcactattaggattgagtctct 33215850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 25941524 - 25941667
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || ||||||||||||||||| |||||||||||| ||||| |||||||||||| ||||| | ||||||||| ||    
T  25941524 tatcagatgataaagtgtgtagaaaaacatggtttagaaaccaacattcaaactagggtt-atagagaatttctcttggtaacaa-ctctagggttggga 25941621  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||| || | ||||||||||||||||    
T  25941622 ttgttttgattcaccttgaacaaagcattattaggattgagtctct 25941667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 221
Target Start/End: Complemental strand, 12166397 - 12166305
Alignment:
Q  130 tagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||| |||  ||||||||||||||||    
T  12166397 tagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacgttgaacaaagcaccattaggattgagtctct 12166305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 5166099 - 5165974
Alignment:
Q  96 gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga 194  Q
    |||||||||| ||||||||| ||||||||||| |||||||||||||| ||||||||  || || ||  |||||||||| ||| |||||||||||| ||||    
T  5166099 gtagaaaacagggtttagaagccaacatacaagctagggtttatagagaatttctcaaggcaagaat-actagggttgggat-gttttgattcactttga 5166002  T
Q  195 acaaaacact-tttaggattgagtctct 221  Q
    |||||||||| |||||||||||||||||    
T  5166001 acaaaacactgtttaggattgagtctct 5165974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 22858231 - 22858150
Alignment:
Q  98 agaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    ||||||||||| ||||||| | |||| | |||||||||||| ||||| |||||||||| |||||||||||||||||||||||    
T  22858231 agaaaacaagggtttagaagctaacacaaaaactagggtttgtagaattttctcttggtaacaaacactagggttgagattg 22858150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 7293862 - 7293958
Alignment:
Q  124 acaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||| ||||| ||||||||||| || ||||||||||||||  ||||||||   ||||||||||| ||||||| ||| ||| ||||||||    
T  7293862 acaaactagggttcatagagatttctcttggtaagaaacactagggttggtattgttttcgctcaccttgaac-aaacactattaagatagagtctct 7293958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 30445552 - 30445633
Alignment:
Q  98 agaaaacaa-ggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    ||||||||| ||||||||| |||||||  |||||||||||| |||| | ||||||||| ||||||||||| |||||||||||    
T  30445552 agaaaacaatggtttagaagccaacattaaaactagggtttgtagataattctcttggcaacaaacactacggttgagattg 30445633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 20526855 - 20526960
Alignment:
Q  109 tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaaacactttta 208  Q
    |||||||||||||| | ||||||||| || ||||  || ||||||  |||||||||||||||||||||||     |||||||||| |  ||||||| |||    
T  20526855 tttagaaaccaacacaaaaactaggggttgtagagtttgctcttgacaacaaacactagggttgagattg-----attcaccttgga--aaacactatta 20526947  T
Q  209 ggattgagtctct 221  Q
    |||||||||||||    
T  20526948 ggattgagtctct 20526960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 188545 - 188401
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||    
T  188545 tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttggga 188447  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  188446 ttgttttgattcaccttgaacaaaacactattaggattgagtctct 188401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 8e-45; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 78 - 219
Target Start/End: Original strand, 5858425 - 5858567
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||    
T  5858425 tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttggga 5858523  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtct 219  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  5858524 ttgttttgattcaccttgaacaaaacactattaggattgagtct 5858567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 47878474 - 47878330
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||    
T  47878474 tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttggga 47878376  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  47878375 ttgttttgattcaccttgaacaaagcactattaggattgagtctct 47878330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 47883184 - 47883041
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat 176  Q
    ||||| |||| |||||| |||||||||| | ||||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||| ||||| |||    
T  47883184 tatcagatgataaagtgtgtagaaaacaggatttagaagccaacatacaaactagggtttatagataatttctcttggcaacaa-cactatggttgggat 47883086  T
Q  177 tgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  47883085 tgttttgattcaccttgaacaaaacactattaggattgagtctct 47883041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 22626287 - 22626143
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || ||||||||||||||||||||||||||||||||| || |||||||||||| ||||| | ||||||||| ||    
T  22626287 tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatggagaatttctcttggcaacaa-ctctagggttggga 22626189  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  22626188 ttgttttgattcaccttgaacaaaacactattaggattgagtctct 22626143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 13893341 - 13893485
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagatt 177  Q
    ||||| ||||||||||| ||||||||||||||||||||  ||||||| ||||||||||||||||| | ||||||||| ||||||||||||||||| ||||    
T  13893341 tatcaaatgaaaaagtgtgtagaaaacaaggtttagaagtcaacataaaaactagggtttatagagaattctcttggcaacaaacactagggttgggatt 13893440  T
Q  178 g-ttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    | |||||||||||||||||||||| ||  |||| |||||||||||    
T  13893441 gtttttgattcaccttgaacaaaataccgttagaattgagtctct 13893485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 27762287 - 27762145
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat 176  Q
    ||||| |||| |||||| ||||||| || ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||    
T  27762287 tatcagatgataaagtgtgtagaaa-cagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgagat 27762190  T
Q  177 tgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||    
T  27762189 tgttttgattcaccttaaacaaagcactattaggattgagtctct 27762145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 54193104 - 54193249
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||    
T  54193104 tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttggga 54193202  T
Q  176 ttg-ttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||| ||||||||||||||||||||| |||| ||||||||||||||||    
T  54193203 ttgtttttgattcaccttgaacaaagcactattaggattgagtctct 54193249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 78 - 217
Target Start/End: Complemental strand, 10613081 - 10612941
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaagg-tttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    |||||||||| |||||| ||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||    
T  10613081 tatcatatgataaagtgtgtagaaaaatagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttggga 10612983  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagt 217  Q
    |||||||||||||||||||||||| |||| ||| ||||||||    
T  10612982 ttgttttgattcaccttgaacaaagcactattaagattgagt 10612941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 10896884 - 10897028
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaagg-tttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| ||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||    
T  10896884 tatcagatgataaagtgtgtagaaaaatagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttggga 10896982  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||    
T  10896983 ttgttttgattcaccttgaacaaagcactattaggattgattctct 10897028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 16462092 - 16462226
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| | |||||  | |||||||| ||||||||||||    
T  16462092 aaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttacagagaatttctcttagcaacaacta-tagggttgggattgttttgat 16462190  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16462191 tcaccttgaacaaaacactattaggattgagtctct 16462226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 29914246 - 29914112
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| || ||||||||| ||||||| |||||||||||||||||| |||||||||||| ||||| ||||||||||| ||||||||||||    
T  29914246 aaaagtgtgtagaaaaacagggtttagaagccaacattcaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgat 29914148  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||| |||| ||||||||||||||||    
T  29914147 tcaccttgaacaaagcactattaggattgagtctct 29914112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 38002767 - 38002892
Alignment:
Q  96 gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga 194  Q
    |||||||||| | |||||||  ||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  38002767 gtagaaaacaggatttagaagtcaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgagattgttttgattcaccttga 38002865  T
Q  195 acaaaacacttttaggattgagtctct 221  Q
    |||||||||  ||||| ||||||||||    
T  38002866 acaaaacaccattaggtttgagtctct 38002892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 98 - 213
Target Start/End: Original strand, 3329792 - 3329908
Alignment:
Q  98 agaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaac 196  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| || |||||||||||||| || ||||||||||||||||||||    
T  3329792 agaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaataaacactagggttgggaatgttttgattcaccttgaac 3329891  T
Q  197 aaaacacttttaggatt 213  Q
    ||| |||| ||||||||    
T  3329892 aaagcactattaggatt 3329908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 10949561 - 10949419
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat 176  Q
    ||||| |||| |||||| |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||| ||| ||||||||  |||    
T  10949561 tatcagatgataaagtgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaac-aactctagggtt-cgat 10949464  T
Q  177 tgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||    
T  10949463 tgttttgattcaccttgaacaaagtactattaggattgagtctct 10949419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 11079397 - 11079540
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat 176  Q
    ||||| |||| |||||| ||| | | || ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||    
T  11079397 tatcagatgataaagtgtgtatatagcagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggat 11079495  T
Q  177 tgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||| ||||||||||||||| | ||||||||||||||    
T  11079496 tgttttgattcatcttgaacaaaacactatcaggattgagtctct 11079540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 91 - 221
Target Start/End: Complemental strand, 10595323 - 10595193
Alignment:
Q  91 agtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcac 189  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||  ||||||||||||||||    
T  10595323 agtgtgtagaaaaaaaggtttagaaaccaacatacaaactagggtttatagagaatttatcttggcaac-aacactagggtttggattgttttgattcac 10595225  T
Q  190 cttgaacaaaacacttttaggattgagtctct 221  Q
    | |||||||| |||| |||||||| |||||||    
T  10595224 catgaacaaagcactattaggattaagtctct 10595193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 4535493 - 4535637
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || ||||||||| |||||||||||||||||||| ||||| |||||||||||| ||||| ||||||||||| |     
T  4535493 tatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggttcatagagaatttctcttggcaacaa-cactagggttgggt 4535591  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||    
T  4535592 ttgttttgattcactttgaacaaaacaccgttaggattgagtctct 4535637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 6303201 - 6303333
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  6303201 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 6303297  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  6303298 tcaccttgaacaaaacactattaggattgagtctct 6303333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 10094365 - 10094233
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  10094365 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 10094269  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  10094268 tcaccttgaacaaaacactattaggattgagtctct 10094233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 10100382 - 10100250
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  10100382 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 10100286  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  10100285 tcaccttgaacaaaacactattaggattgagtctct 10100250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 10201245 - 10201113
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  10201245 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 10201149  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  10201148 tcaccttgaacaaaacactattaggattgagtctct 10201113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 27544177 - 27544296
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaa 198  Q
    |||||||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||||||||||||||||    
T  27544177 aaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgattcaccttgaacaa 27544273  T
Q  199 aacacttttaggattgagtctct 221  Q
    |||||| ||||||||||||||||    
T  27544274 aacactattaggattgagtctct 27544296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 103 - 221
Target Start/End: Original strand, 16996780 - 16996898
Alignment:
Q  103 acaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaaaca 202  Q
    ||||||||||||| |||||| ||||||||||||||||||| | ||||||||| || ||||||||||||||  | ||||||||||||||| ||| ||||||    
T  16996780 acaaggtttagaagccaacaaacaaactagggtttatagagaattctcttggtaataaacactagggttggaaatgttttgattcacctagaataaaaca 16996879  T
Q  203 cttttaggattgagtctct 221  Q
    || ||||||||||||||||    
T  16996880 ctgttaggattgagtctct 16996898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 10208291 - 10208159
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  10208291 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 10208195  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||| ||||||||||||    
T  10208194 tcaccttgaacaaaacactattacgattgagtctct 10208159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 54188410 - 54188532
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattg-ttttgattcaccttgaaca 197  Q
    |||||| ||||||||||||||||||||||||| |||||||||| |||||||||||| ||| ||||||||| ||| ||||| |||||||||||||||||||    
T  54188410 aaaacagggtttagaaaccaacatacaaactaaggtttatagagaatttctcttggcaac-aacactaggtttgggattgtttttgattcaccttgaaca 54188508  T
Q  198 aaacacttttaggattgagtctct 221  Q
    || |||| |||| |||||||||||    
T  54188509 aagcactattagaattgagtctct 54188532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 15823889 - 15823788
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaa 199  Q
    |||||||||||| ||| |||||| |||||||||||||||||||  |||||||| | |||||||||||||| |||||||||||||||||||||||||||||    
T  15823889 aaaacaaggtttggaagccaaca-acaaactagggtttatagagttttctctttgaaacaaacactagggctgagattgttttgattcaccttgaacaaa 15823791  T
Q  200 aca 202  Q
    |||    
T  15823790 aca 15823788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 26762941 - 26763061
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaa 199  Q
    |||||| ||||||||||| |||| |||||||||| |||||||| ||||||| ||||||||||||||||||||| ||||| |||||||||||||| |||||    
T  26762941 aaaacagggtttagaaacgaaca-acaaactaggatttatagagatttctcctgggaacaaacactagggttgtgattgatttgattcaccttggacaaa 26763039  T
Q  200 acacttttaggattgagtctct 221  Q
    ||| | |||||||  |||||||    
T  26763040 acattattaggataaagtctct 26763061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 20031574 - 20031477
Alignment:
Q  124 acaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||| |||||||| |||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||    
T  20031574 acaaactaggctttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctct 20031477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 100 - 212
Target Start/End: Complemental strand, 27703450 - 27703338
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggttta-tagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaa 198  Q
    |||||||||||||||| | |||| | ||||||||||||  |||| ||||||||||| | ||||||||||| ||  |||||||||||||||||||||||||    
T  27703450 aaaacaaggtttagaagcaaaca-agaaactagggttttgtagagatttctcttggcatcaaacactaggatttggattgttttgattcaccttgaacaa 27703352  T
Q  199 aacacttttaggat 212  Q
    |||| | |||||||    
T  27703351 aacattgttaggat 27703338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 211
Target Start/End: Complemental strand, 46966921 - 46966817
Alignment:
Q  107 ggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaaacacttt 206  Q
    ||||||||| ||||||   ||| || |||||||||| ||| ||||||| |||||||||||||||||||||||||| |||||| ||| ||||||||| | |    
T  46966921 ggtttagaagccaacaacaaaattaaggtttatagagattcctcttggcaacaaacactagggttgagattgtttcgattcatcttaaacaaaacaatgt 46966822  T
Q  207 tagga 211  Q
    |||||    
T  46966821 tagga 46966817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 219
Target Start/End: Original strand, 7417967 - 7418085
Alignment:
Q  96 gtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttga 194  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||| | |||||||||||| ||  ||||||| |     ||||||||| |||||||||||    
T  7417967 gtagaaaacggggtttagaagccaacataaaaactagggtttataaagaatttctcttggcaa-taacactaag-----gattgttttaattcaccttga 7418060  T
Q  195 acaaaacacttttaggattgagtct 219  Q
    |||||||||  ||| ||||||||||    
T  7418061 acaaaacaccattatgattgagtct 7418085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 48390523 - 48390445
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgg 154  Q
    ||||| |||| |||||| |||||||| || ||||||||| || ||||||||||||||||||||||| ||||||||||||    
T  48390523 tatcagatgataaagtgtgtagaaaaacagggtttagaagccgacatacaaactagggtttatagagaatttctcttgg 48390445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 198
Target Start/End: Complemental strand, 42297876 - 42297838
Alignment:
Q  160 aacactagggttgagattgttttgattcaccttgaacaa 198  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  42297876 aacactaggattgagattgttttgattcaccttgaacaa 42297838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 7768552 - 7768670
Alignment:
Q  99 gaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaaca--ctagggttgagattgttttgattcaccttgaa 195  Q
    |||||||||| ||||||| |||||||  |||||| ||||| |||| | ||||||||| ||||||||  ||| |||||||||||     |||||||||| |    
T  7768552 gaaaacaagggtttagaagccaacatcaaaactaaggtttgtagagaattctcttggcaacaaacaaactaaggttgagattg-----attcaccttgga 7768646  T
Q  196 caaaacacttttaggattgagtctct 221  Q
      ||||||| ||||||||||||||||    
T  7768647 --aaacactattaggattgagtctct 7768670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 1618934 - 1618882
Alignment:
Q  99 gaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctct 151  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||| ||||||||    
T  1618934 gaaaacaagggtttagaaacaaaca-acaaactagggtttatagagatttctct 1618882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 13419870 - 13419943
Alignment:
Q  105 aaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    |||||||| || ||||||   |||||||||||| ||||  || ||||||| ||||||||||||||||| |||||    
T  13419870 aaggtttaaaagccaacaagaaaactagggtttgtagagtttgctcttggcaacaaacactagggttgggattg 13419943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 22712819 - 22712675
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| | ||||||||| ||    
T  22712819 tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-ctctagggttggga 22712721  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  22712720 ttgttttgattcaccttgaacaaaacactattaggattgagtctct 22712675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 12781523 - 12781380
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat 176  Q
    ||||| |||| |||||| |||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||| ||||||||||| |||    
T  12781523 tatcagatgataaagtgtgtagaaaacagggtttagaaaccaacattcaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggat 12781425  T
Q  177 tgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||    
T  12781424 tgttttgattcaccttaaacaaagcactattaggattgagtctct 12781380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 38190877 - 38191020
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat 176  Q
    ||||| |||| |||||| |||||||||| ||||||||| |||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||| |||    
T  38190877 tatcagatgataaagtgtgtagaaaacagggtttagaagccaacatacaaactagggtttataaataatttctcttggcaacaa-cactagggttgggat 38190975  T
Q  177 tgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  38190976 tgttttgattcaccttgaacaaaacactattaagattgagtctct 38191020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 30478873 - 30479017
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaag-gtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| ||||||||  || ||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||    
T  30478873 tatcagatgataaagtgtgtagaaaaacagagtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttggga 30478971  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  30478972 ttgttttgattcaccttgaacaaagcactattaggattgagtctct 30479017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 17932523 - 17932657
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| || |||||| ||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||||||||||||    
T  17932523 aaaagtgtgtagaaaaacagggtttataaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgat 17932621  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||| |||| ||||||||||||||||    
T  17932622 tcaccttgaacaaagcactattaggattgagtctct 17932657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 100 - 221
Target Start/End: Complemental strand, 27517919 - 27517798
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaa 198  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||| |||||||||||||||||||||||||    
T  27517919 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctctttgcaacaa-cactagggttgggattgttttgattcaccttgaacaa 27517821  T
Q  199 aacacttttaggattgagtctct 221  Q
    | |||| ||||||||||||||||    
T  27517820 agcactattaggattgagtctct 27517798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 20050325 - 20050181
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttatagaaa-tttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || ||| |||||||||||||||||||||||||||||||||| |||||||| | ||||| | ||||||||| ||    
T  20050325 tatcagatgataaagtgtgtagaaaaacagggtatagaaaccaacatacaaactagggtttatagaaaatttctctttgcaacaa-ctctagggttggga 20050227  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  20050226 ttgttttgattcaccttgaacaaaacactattaggattgagtctct 20050181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 17943417 - 17943560
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagat 176  Q
    ||||| |||| || ||| |||||||| | ||||||||| ||||||||||||||| |||||||||| |||||||||||| ||||| ||||||||||| |||    
T  17943417 tatcagatgataaggtgtgtagaaaatagggtttagaagccaacatacaaactatggtttatagagaatttctcttggcaacaa-cactagggttgggat 17943515  T
Q  177 tgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||    
T  17943516 tgttttgattcaccttgaacaaatcactattaggattgagtctct 17943560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 22717518 - 22717384
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| | |||||  | |||||||| ||||||||||||    
T  22717518 aaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttacagagaatttctcttagcaacaacta-tagggttgggattgttttgat 22717420  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  22717419 tcaccttgaacaaaacactattaggattgagtctct 22717384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 33674698 - 33674564
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| || |||||||||||||||||| |||||| |||||||||| |||||||||||| ||||| ||||||||||| ||||||||||||    
T  33674698 aaaagtgtgtagaaaaacagggtttagaaaccaacatataaactatggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgat 33674600  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||| |||| ||||||||||||||||    
T  33674599 tcaccttgaacaaagcactattaggattgagtctct 33674564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 20055068 - 20054924
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || ||| ||||||||||||||||||||| |||||||||| |||||||||| | ||||| | ||||||||| ||    
T  20055068 tatcagatgataaagtgtgtagaaaaacagggtatagaaaccaacatacaaactaaggtttatagagaatttctctttgcaacaa-ctctagggttggga 20054970  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  20054969 ttgttttgattcaccttgaacaaaacactattaggattgagtctct 20054924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 37171055 - 37170911
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||| ||||||| ||    
T  37171055 tatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaa-caccagggttggga 37170957  T
Q  176 ttgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||| |||||||||||||| |||| ||||||||||||||||    
T  37170956 ttgttttgaatcaccttgaacaaagcactattaggattgagtctct 37170911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 78 - 199
Target Start/End: Complemental strand, 35894564 - 35894442
Alignment:
Q  78 tatcatatgaaaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgaga 175  Q
    ||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||    
T  35894564 tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactagggttggga 35894466  T
Q  176 ttgttttgattcaccttgaacaaa 199  Q
    ||||||||||||||||||||||||    
T  35894465 ttgttttgattcaccttgaacaaa 35894442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 17462327 - 17462459
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  17462327 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 17462423  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  17462424 tcaccttgaacaaaacactattaggattgagtctct 17462459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 39686874 - 39687006
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  39686874 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 39686970  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  39686971 tcaccttgaacaaaacactattaggattgagtctct 39687006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 45567300 - 45567432
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  45567300 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 45567396  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  45567397 tcaccttgaacaaaacactattaggattgagtctct 45567432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 100 - 219
Target Start/End: Original strand, 33603897 - 33604015
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaa 199  Q
    |||||| ||||||||||| |||| ||||||||||||||||||| |||||| |||| |||||||| |||||||| ||||||||||||||||||||||||||    
T  33603897 aaaacatggtttagaaacaaaca-acaaactagggtttatagagatttcttttggcaacaaacattagggttgggattgttttgattcaccttgaacaaa 33603995  T
Q  200 acacttttaggattgagtct 219  Q
    ||||| |||  |||||||||    
T  33603996 acactattataattgagtct 33604015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 2736096 - 2736228
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  2736096 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 2736192  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||| |||||||||||||| ||||||||||||||||    
T  2736193 tcacattgaacaaaacactattaggattgagtctct 2736228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 2740832 - 2740964
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  2740832 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 2740928  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||| |||||||||||||| ||||||||||||||||    
T  2740929 tcacattgaacaaaacactattaggattgagtctct 2740964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 39679936 - 39680068
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||  |||||||| ||||||||||||||||||| ||| ||| |||| ||||| | ||||||||| ||||||||||||    
T  39679936 aaaagtgtgtagaaaaacaaggttta--aaccaacaaacaaactagggtttatagagaatctcttttggcaacaa-ctctagggttgggattgttttgat 39680032  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  39680033 tcaccttgaacaaaacactattaggattgagtctct 39680068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 30262052 - 30261951
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaa 199  Q
    |||||| ||||||||| |||||| |||||||| ||||||||||  |||||||||| || |||||||||||||||||||||||||||||||||  ||||||    
T  30262052 aaaacatggtttagaagccaaca-acaaactacggtttatagagttttctcttggcaataaacactagggttgagattgttttgattcacctgaaacaaa 30261954  T
Q  200 aca 202  Q
    |||    
T  30261953 aca 30261951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 45158257 - 45158331
Alignment:
Q  147 tctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||| |||||||| |||||||||||||||||||||||| |||| |||||||||| |||||||  |||||||    
T  45158257 tctcttggaaacaaacattagggttgagattgttttgattcatcttgcacaaaacactgttaggatatagtctct 45158331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 20589727 - 20589786
Alignment:
Q  162 cactagggttgagattgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||||||||    
T  20589727 cactatggttgtgattgttttggttcaccttgaacaaaacactgttaggattgagtctct 20589786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 28459035 - 28458988
Alignment:
Q  174 gattgttttgattcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28459035 gattgttttgattcaccttgaacaaaacactattaggattgagtctct 28458988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 26345575 - 26345653
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    ||||||||| |||||| ||||||   |||||||| ||| |||| ||||||||||| |||||||| ||||||||||||||    
T  26345575 aaaacaaggattagaagccaacaacaaaactaggatttgtagagatttctcttggtaacaaacattagggttgagattg 26345653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 43139354 - 43139434
Alignment:
Q  99 gaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    |||||||||| ||||||| |||||| | ||||| |||||| ||||  || ||||||| |||||||||||||||||||||||    
T  43139354 gaaaacaagggtttagaagccaacacaaaaacttgggtttgtagagtttgctcttggcaacaaacactagggttgagattg 43139434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 30720872 - 30720820
Alignment:
Q  126 aaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    |||||||||||| |||| | ||||||||| | |||||||||||||||||||||    
T  30720872 aaactagggtttgtagagaattctcttggcaccaaacactagggttgagattg 30720820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 178
Target Start/End: Complemental strand, 27248193 - 27248111
Alignment:
Q  96 gtagaaaacaaggtttagaaaccaacatacaaa-ctagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    ||||||||||||| |||||| |||||| ||||| ||| ||||| |||| | ||||||||| ||||||||||| || ||||||||    
T  27248193 gtagaaaacaaggattagaagccaaca-acaaagctaaggtttgtagataattctcttggcaacaaacactacgggtgagattg 27248111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 35028556 - 35028634
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttgagattg 178  Q
    |||||| ||||||||| ||||||   ||| | |||||| ||||  || ||||||| |||||||||||||||||||||||    
T  35028556 aaaacagggtttagaatccaacaataaaatttgggtttgtagagtttgctcttggtaacaaacactagggttgagattg 35028634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 39287183 - 39287256
Alignment:
Q  96 gtagaaaacaagg-tttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagg 168  Q
    ||||||||||||| ||||||| ||||||   |||||||||||| |||| | ||||||| | |||||||||||||    
T  39287183 gtagaaaacaagggtttagaagccaacaagaaaactagggtttgtagagaattctcttagcaacaaacactagg 39287256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 10942798 - 10942726
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttg 172  Q
    ||||||||| |||||| ||||||   | ||||||| || |||| | ||||||||| |||||||||||||||||    
T  10942798 aaaacaaggattagaagccaacaataatactagggattgtagagaattctcttggcaacaaacactagggttg 10942726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 10948667 - 10948595
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttatagaaatttctcttgggaacaaacactagggttg 172  Q
    ||||||||| |||||| ||||||   | ||||||| || |||| | ||||||||| |||||||||||||||||    
T  10948667 aaaacaaggattagaagccaacaataatactagggattgtagagaattctcttggcaacaaacactagggttg 10948595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 16214 - 16348
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| || ||||||||| ||||||| |||||||||||||||||| |||||||||||| ||||| ||||||||||| ||||||||||||    
T  16214 aaaagtgtgtagaaaaacagggtttagaagccaacattcaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgat 16312  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    |||||||||||||| |||| ||||||||||||||||    
T  16313 tcaccttgaacaaagcactattaggattgagtctct 16348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 100 - 221
Target Start/End: Complemental strand, 17266 - 17145
Alignment:
Q  100 aaaacaaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgattcaccttgaacaa 198  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||||| |||| |||||||||    
T  17266 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgtttcatcttgaacaa 17168  T
Q  199 aacacttttaggattgagtctct 221  Q
    | |||| ||||||||||||||||    
T  17167 agcactattaggattgagtctct 17145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 31032 - 31164
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  31032 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 31128  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  31129 tcaccttgaacaaaacactattaggattgagtctct 31164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 224710 - 224842
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctcttgggaacaaacactagggttgagattgttttgat 185  Q
    ||||||| |||||||| |||||||||||  |||||| ||||||||||||||||||| ||| |||||||| ||||| | ||||||||| ||||||||||||    
T  224710 aaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaa-ctctagggttgggattgttttgat 224806  T
Q  186 tcaccttgaacaaaacacttttaggattgagtctct 221  Q
    ||||||||||||||||||| ||||||||||||||||    
T  224807 tcaccttgaacaaaacactattaggattgagtctct 224842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1764 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1764
Description:

Target: scaffold1764; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 1325 - 1391
Alignment:
Q  88 aaaagtgcgtagaaaa-caaggtttagaaaccaacatacaaactagggtttataga-aatttctctt 152  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1325 aaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaatttctctt 1391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University