View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6373_low_31 (Length: 265)
Name: NF6373_low_31
Description: NF6373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6373_low_31 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 12 - 243
Target Start/End: Complemental strand, 30995787 - 30995560
Alignment:
| Q |
12 |
atgaatacgaataaagaaaataatggagcatttagccatatacctaccttttttaattatctcaccgttatacaatataaagtgaagatttacacaaaaa |
111 |
Q |
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| T |
30995787 |
atgaatacgaataaagaaaataatggagcatttagctatatacct----tttttaattatctcaccgttatacaatataaagtgaagatttacacaaaaa |
30995692 |
T |
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| Q |
112 |
tctaatatagattgttgtagtagataaatgaaaaatatgttctacaaatgcataatctagaagaaatctaaaagaaaacaacgtccaaaatacattttaa |
211 |
Q |
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| T |
30995691 |
tctaatatagattgttgtagtagataaatgaaaaatatgttctacaaatgcataatctagaagaaatctaaaagaaaacaacgtccaaaatacattttaa |
30995592 |
T |
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| Q |
212 |
aggtaaaatctctcaaaagatatttcttaaag |
243 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
30995591 |
aggtaaaatctctcaaaagatatttcttaaag |
30995560 |
T |
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