View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6378_low_35 (Length: 229)
Name: NF6378_low_35
Description: NF6378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6378_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 14 - 206
Target Start/End: Complemental strand, 28610047 - 28609855
Alignment:
| Q |
14 |
atcacatattagttttattcatttgtccacggatatcttagttttccaaagaaatatgagatactcaagatgaaaatcgagtcggtacattaaagttgat |
113 |
Q |
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| T |
28610047 |
atcacatattagttttattcatttgtccacggatatcttagttttccaaagaaatatgagatactcaagatgaaaatggagtcggtacattaaagttgat |
28609948 |
T |
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| Q |
114 |
ctttctgcatacatgtgatgcatataaataacatttactatatcatgagtaaaccaacatagttggatttatcaatgagtgatactctacttc |
206 |
Q |
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| T |
28609947 |
ctttctgcatacatgtgatgcatataaataacatttactatatcatgagtaaaccaacatagttggatttatcaatgagtgatactcaacttc |
28609855 |
T |
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