View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6379_high_18 (Length: 341)
Name: NF6379_high_18
Description: NF6379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6379_high_18 |
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Alignment Details
Target: chr6 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 24 - 264
Target Start/End: Complemental strand, 26234082 - 26233842
Alignment:
| Q |
24 |
ataagactaatccaaaaccttataaactctatgaatcaccaactgaaatagcttggcctgaaattcccaacggtgaccgcgaaattcgtcgtgaaatctc |
123 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
26234082 |
ataagactaatccaaaaccttataaactctatgaatcaccaactgaaatagcttggcctgaaattcccaacggtgaccgcgaaattcgtcgcgaaatctc |
26233983 |
T |
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| Q |
124 |
ccttagaacaggtcttatctcaggcttaccaggtgaccaatcaaatattttttctgattcttgcttgatcttcataacttgactatgaattggtataccc |
223 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26233982 |
ccttagaacaggtcttatctcaggcttaccaggtgaccaatcaaatattttctctgattcttgcttgatcttcataacttgactatgaattggtataccc |
26233883 |
T |
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| Q |
224 |
ttttgtcctacaccttcatccttcttgttattcttcatgtt |
264 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
26233882 |
ttttgtcctacaccttcatccttcttgttattcttcatgtt |
26233842 |
T |
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