View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6382_high_10 (Length: 252)
Name: NF6382_high_10
Description: NF6382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6382_high_10 |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 25575721 - 25575955
Alignment:
| Q |
1 |
ggagtatgaaggaaaaaagcaaagcagaaatgaaacagaatcacctaaaagatccagggagaagaagatatcaaggcgatcagtctcatcctctttgcta |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25575721 |
ggagtatgaaggaaaaaagcaaagcagaaatgaaacagaatcacctaaaagatccagggagaagaagatatcaaggcgatcagtctcatcctctttgcta |
25575820 |
T |
|
| Q |
101 |
tcagattactctgcatttcgctcacttacacattctcaatcatccaaatcactgcctaggtctactaaatattctagatcaagatcagtgtcttctagag |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25575821 |
tcagattactctgcatttcgctcacttacacattctcaatcatccaaatcactgcctaggtctactaaatattctagatcaagatcagtgtcttctagag |
25575920 |
T |
|
| Q |
201 |
cacattcttcatcttcaaagtcagtgtcttcctca |
235 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
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| T |
25575921 |
cacattcttcatcttcaaagtcagtgtcttcctca |
25575955 |
T |
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