View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6382_low_9 (Length: 266)
Name: NF6382_low_9
Description: NF6382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6382_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 9161859 - 9161623
Alignment:
| Q |
19 |
gttacactaatgcatttgcataaacagcttaaaccagttaatttcttgnnnnnnngcatgcagtttctacccctatacccacagtctctaatagtgcaaa |
118 |
Q |
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| T |
9161859 |
gttacactaatgcatttgcataaacagcttaaaccagttaatttcttgaaaaaaagcatgcagtttctacccctatacccacagtctctaatagtgcaaa |
9161760 |
T |
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| Q |
119 |
cctcctcgctttaagaagcataagaactgctcagagtcatggaatcatttcacaatagacatagaaaagaaatctgcatgcaactattgtgatggaaaat |
218 |
Q |
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| T |
9161759 |
cctcctcgctttaagaagcataagaactgctcagagtcatggaatcatttcacaatagacatagaaaagaaatctgcatgcaactattgtgatggaaaat |
9161660 |
T |
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| Q |
219 |
gaagtatgataatgcaactaattctatgtgtgttcat |
255 |
Q |
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| T |
9161659 |
gaagtatgataatgcaactagttctatgtgtgttcat |
9161623 |
T |
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