View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6383_low_1 (Length: 865)

Name: NF6383_low_1
Description: NF6383
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6383_low_1
NF6383_low_1
[»] chr7 (43 HSPs)
chr7 (19-851)||(12980939-12981771)
chr7 (371-582)||(6765610-6765824)
chr7 (393-484)||(9021827-9021917)
chr7 (393-483)||(7398435-7398525)
chr7 (690-814)||(13065086-13065209)
chr7 (393-484)||(23859057-23859148)
chr7 (394-582)||(2611187-2611379)
chr7 (410-484)||(20091308-20091382)
chr7 (410-484)||(8171566-8171640)
chr7 (410-484)||(48983871-48983945)
chr7 (393-476)||(36891562-36891645)
chr7 (410-484)||(10955485-10955559)
chr7 (410-484)||(18776793-18776867)
chr7 (410-484)||(23551098-23551172)
chr7 (410-484)||(24525712-24525786)
chr7 (410-484)||(29077221-29077295)
chr7 (410-484)||(47984997-47985071)
chr7 (410-483)||(12596315-12596388)
chr7 (393-444)||(27237490-27237541)
chr7 (393-447)||(9014826-9014880)
chr7 (410-484)||(38414903-38414977)
chr7 (410-484)||(10329437-10329511)
chr7 (410-484)||(19692095-19692169)
chr7 (398-484)||(20153190-20153276)
chr7 (414-484)||(28749715-28749784)
chr7 (93-177)||(12557680-12557764)
chr7 (396-484)||(18201124-18201212)
chr7 (393-484)||(12419522-12419613)
chr7 (421-484)||(23744808-23744871)
chr7 (433-484)||(26254017-26254068)
chr7 (433-484)||(33162366-33162417)
chr7 (393-475)||(17800257-17800339)
chr7 (521-587)||(23020406-23020471)
chr7 (115-177)||(31940109-31940171)
chr7 (388-445)||(23020549-23020606)
chr7 (410-455)||(25010434-25010479)
chr7 (410-484)||(8239688-8239762)
chr7 (356-484)||(21763614-21763745)
chr7 (411-484)||(38971255-38971328)
chr7 (413-481)||(36902954-36903022)
chr7 (521-587)||(23744911-23744977)
chr7 (39-109)||(31940048-31940118)
chr7 (526-587)||(12419416-12419477)
[»] chr8 (38 HSPs)
chr8 (281-587)||(39332330-39332639)
chr8 (281-484)||(5721426-5721634)
chr8 (393-484)||(5942680-5942771)
chr8 (393-484)||(7944550-7944641)
chr8 (389-484)||(11290164-11290259)
chr8 (403-484)||(8102906-8102987)
chr8 (39-176)||(24769458-24769597)
chr8 (393-483)||(25561523-25561612)
chr8 (410-484)||(45475818-45475892)
chr8 (401-582)||(15078750-15078934)
chr8 (396-484)||(41677202-41677290)
chr8 (410-484)||(10917392-10917466)
chr8 (410-484)||(23606657-23606731)
chr8 (410-484)||(23798289-23798363)
chr8 (410-484)||(30883330-30883404)
chr8 (410-484)||(42600783-42600857)
chr8 (381-484)||(15167443-15167547)
chr8 (367-484)||(23941119-23941238)
chr8 (396-582)||(34048635-34048823)
chr8 (410-484)||(2952249-2952323)
chr8 (410-484)||(5860772-5860846)
chr8 (410-484)||(13534715-13534788)
chr8 (410-484)||(13624255-13624328)
chr8 (400-484)||(5973135-5973219)
chr8 (430-582)||(30674330-30674485)
chr8 (400-484)||(34789890-34789974)
chr8 (410-484)||(3048545-3048619)
chr8 (410-484)||(37430186-37430260)
chr8 (410-484)||(41879182-41879256)
chr8 (400-484)||(14510011-14510094)
chr8 (404-484)||(8646201-8646280)
chr8 (523-587)||(38009073-38009137)
chr8 (521-582)||(5942782-5942843)
chr8 (39-176)||(9201894-9202031)
chr8 (523-582)||(15167340-15167399)
chr8 (521-587)||(7944444-7944510)
chr8 (521-582)||(14509907-14509968)
chr8 (398-447)||(38009204-38009252)
[»] scaffold1590 (1 HSPs)
scaffold1590 (393-484)||(286-377)
[»] scaffold0182 (1 HSPs)
scaffold0182 (356-582)||(23927-24151)
[»] chr2 (38 HSPs)
chr2 (400-593)||(16096998-16097194)
chr2 (394-484)||(12134068-12134158)
chr2 (393-584)||(24035470-24035664)
chr2 (396-582)||(21665628-21665816)
chr2 (397-484)||(38400785-38400872)
chr2 (410-484)||(9046029-9046103)
chr2 (410-484)||(24410437-24410511)
chr2 (393-479)||(37182653-37182739)
chr2 (388-484)||(28425738-28425834)
chr2 (410-482)||(29939892-29939964)
chr2 (393-484)||(11912785-11912876)
chr2 (410-484)||(3155217-3155291)
chr2 (410-484)||(4505894-4505968)
chr2 (410-484)||(6965007-6965081)
chr2 (410-484)||(26716128-26716202)
chr2 (410-484)||(10762593-10762667)
chr2 (387-484)||(16227396-16227493)
chr2 (38-175)||(36992503-36992640)
chr2 (393-484)||(13800572-13800664)
chr2 (410-484)||(3953006-3953080)
chr2 (410-484)||(7162784-7162858)
chr2 (410-484)||(8907107-8907181)
chr2 (410-484)||(12337476-12337550)
chr2 (395-484)||(22727530-22727619)
chr2 (411-484)||(27506768-27506841)
chr2 (393-484)||(7742162-7742253)
chr2 (523-590)||(11952508-11952575)
chr2 (393-439)||(11952679-11952725)
chr2 (521-582)||(42029263-42029324)
chr2 (436-484)||(5952743-5952791)
chr2 (523-582)||(7742056-7742115)
chr2 (426-484)||(34693991-34694049)
chr2 (426-484)||(34716403-34716461)
chr2 (397-434)||(37622418-37622455)
chr2 (522-578)||(12694794-12694850)
chr2 (436-484)||(40636164-40636212)
chr2 (523-582)||(37182760-37182819)
chr2 (526-580)||(12133965-12134019)
[»] scaffold0012 (1 HSPs)
scaffold0012 (404-512)||(206489-206597)
[»] chr1 (40 HSPs)
chr1 (393-484)||(38547063-38547154)
chr1 (39-173)||(37648750-37648883)
chr1 (393-484)||(39134750-39134841)
chr1 (410-484)||(5316692-5316766)
chr1 (410-484)||(23185439-23185513)
chr1 (393-483)||(43235798-43235888)
chr1 (373-579)||(6221650-6221860)
chr1 (408-484)||(6771801-6771877)
chr1 (393-484)||(5533307-5533398)
chr1 (410-484)||(9173050-9173124)
chr1 (410-484)||(9181032-9181106)
chr1 (410-484)||(14146312-14146386)
chr1 (388-484)||(26803938-26804031)
chr1 (410-484)||(27559649-27559723)
chr1 (393-484)||(45758489-45758580)
chr1 (410-484)||(1366905-1366979)
chr1 (410-484)||(4971645-4971719)
chr1 (410-484)||(5027561-5027635)
chr1 (410-484)||(19955729-19955803)
chr1 (410-484)||(44655753-44655827)
chr1 (408-484)||(40501817-40501893)
chr1 (410-484)||(3406430-3406504)
chr1 (410-484)||(3440316-3440390)
chr1 (410-484)||(17168968-17169042)
chr1 (396-478)||(33170757-33170839)
chr1 (411-484)||(51607466-51607540)
chr1 (412-484)||(16140069-16140141)
chr1 (408-484)||(50881440-50881516)
chr1 (393-480)||(38853518-38853604)
chr1 (398-484)||(10925981-10926067)
chr1 (419-484)||(21740964-21741029)
chr1 (423-480)||(35392295-35392352)
chr1 (523-587)||(39134641-39134705)
chr1 (410-484)||(41697164-41697238)
chr1 (409-483)||(50146307-50146381)
chr1 (410-484)||(13913507-13913583)
chr1 (523-582)||(10925880-10925939)
chr1 (410-453)||(44895664-44895707)
chr1 (521-587)||(45758622-45758688)
chr1 (410-447)||(27906781-27906818)
[»] chr5 (46 HSPs)
chr5 (397-581)||(2530823-2531009)
chr5 (395-484)||(36868901-36868990)
chr5 (356-484)||(41911642-41911773)
chr5 (393-484)||(34425887-34425978)
chr5 (410-484)||(9364292-9364366)
chr5 (410-484)||(34756391-34756465)
chr5 (396-484)||(14318410-14318498)
chr5 (393-582)||(11242243-11242434)
chr5 (393-483)||(2024668-2024758)
chr5 (410-484)||(19523200-19523274)
chr5 (410-484)||(27079012-27079086)
chr5 (410-484)||(28822367-28822441)
chr5 (388-484)||(10543653-10543748)
chr5 (408-484)||(36187904-36187980)
chr5 (410-484)||(16198819-16198893)
chr5 (410-484)||(16799352-16799426)
chr5 (413-587)||(26718868-26719045)
chr5 (413-587)||(26988612-26988789)
chr5 (410-484)||(30854330-30854404)
chr5 (410-484)||(38869388-38869462)
chr5 (393-482)||(1366553-1366642)
chr5 (395-484)||(2412074-2412163)
chr5 (411-484)||(27924084-27924157)
chr5 (379-484)||(33037750-33037855)
chr5 (410-478)||(23284093-23284161)
chr5 (414-484)||(7670929-7670999)
chr5 (410-484)||(15480114-15480188)
chr5 (410-484)||(16592099-16592173)
chr5 (414-484)||(31194637-31194706)
chr5 (410-484)||(2274891-2274965)
chr5 (401-483)||(15639635-15639717)
chr5 (410-484)||(22986583-22986657)
chr5 (410-484)||(40389561-40389635)
chr5 (398-444)||(40794392-40794438)
chr5 (44-176)||(36684124-36684256)
chr5 (397-484)||(24395727-24395814)
chr5 (521-587)||(27530609-27530675)
chr5 (400-484)||(22648761-22648845)
chr5 (433-484)||(7338023-7338074)
chr5 (523-578)||(40794254-40794309)
chr5 (414-484)||(31881459-31881528)
chr5 (521-587)||(33037897-33037963)
chr5 (522-587)||(35080691-35080756)
chr5 (393-479)||(17344940-17345026)
chr5 (521-579)||(34426018-34426076)
chr5 (521-578)||(15639761-15639817)
[»] chr4 (55 HSPs)
chr4 (400-484)||(4167918-4168002)
chr4 (394-582)||(27112020-27112210)
chr4 (410-484)||(54780783-54780857)
chr4 (393-579)||(52468275-52468463)
chr4 (410-484)||(37777250-37777324)
chr4 (410-484)||(38209618-38209692)
chr4 (410-484)||(43455558-43455632)
chr4 (409-484)||(35779352-35779427)
chr4 (410-484)||(2790768-2790842)
chr4 (38-176)||(30201533-30201671)
chr4 (410-484)||(40089522-40089596)
chr4 (410-484)||(47128993-47129067)
chr4 (408-484)||(5128869-5128945)
chr4 (396-484)||(24396926-24397014)
chr4 (400-484)||(37744937-37745021)
chr4 (398-587)||(36118380-36118571)
chr4 (393-484)||(36178662-36178752)
chr4 (389-484)||(36362898-36362992)
chr4 (396-484)||(51691942-51692032)
chr4 (410-484)||(10978906-10978980)
chr4 (410-484)||(34027585-34027659)
chr4 (410-484)||(34768601-34768675)
chr4 (410-484)||(54083269-54083343)
chr4 (393-582)||(39329318-39329510)
chr4 (416-484)||(37514671-37514739)
chr4 (398-484)||(10042027-10042113)
chr4 (418-484)||(32128598-32128664)
chr4 (410-484)||(32915391-32915465)
chr4 (410-484)||(48209246-48209320)
chr4 (431-582)||(39655179-39655334)
chr4 (404-484)||(2135348-2135428)
chr4 (388-484)||(45656159-45656255)
chr4 (410-484)||(19498510-19498582)
chr4 (393-484)||(40217221-40217312)
chr4 (410-484)||(13460213-13460287)
chr4 (410-484)||(16845027-16845101)
chr4 (523-587)||(40217352-40217416)
chr4 (408-484)||(10428224-10428308)
chr4 (410-484)||(1105538-1105612)
chr4 (412-482)||(35465115-35465184)
chr4 (410-455)||(24969443-24969488)
chr4 (436-484)||(17679432-17679480)
chr4 (523-590)||(4167840-4167907)
chr4 (396-439)||(15735087-15735130)
chr4 (433-484)||(51964737-51964788)
chr4 (521-587)||(5893132-5893198)
chr4 (422-484)||(16882422-16882484)
chr4 (529-587)||(51691841-51691899)
chr4 (410-455)||(38352311-38352356)
chr4 (524-587)||(24614077-24614140)
chr4 (521-587)||(11906823-11906889)
chr4 (398-484)||(29425201-29425287)
chr4 (410-463)||(23509846-23509899)
chr4 (521-582)||(30507045-30507106)
chr4 (410-447)||(55255275-55255312)
[»] scaffold0018 (1 HSPs)
scaffold0018 (394-484)||(173538-173628)
[»] chr6 (24 HSPs)
chr6 (394-484)||(2477612-2477702)
chr6 (393-484)||(21183703-21183794)
chr6 (410-484)||(13727427-13727501)
chr6 (410-484)||(20711748-20711822)
chr6 (410-484)||(21479498-21479572)
chr6 (410-484)||(27788716-27788790)
chr6 (410-484)||(33774121-33774195)
chr6 (393-480)||(20611777-20611864)
chr6 (410-484)||(28075787-28075861)
chr6 (396-481)||(4036938-4037023)
chr6 (410-483)||(19737721-19737794)
chr6 (411-484)||(21280550-21280623)
chr6 (393-484)||(6159425-6159516)
chr6 (410-484)||(24711027-24711101)
chr6 (408-484)||(34397859-34397935)
chr6 (414-484)||(1155877-1155947)
chr6 (410-484)||(17353958-17354032)
chr6 (410-484)||(30832552-30832626)
chr6 (526-582)||(2477512-2477568)
chr6 (433-484)||(27314207-27314258)
chr6 (412-455)||(27994775-27994818)
chr6 (523-582)||(27994875-27994934)
chr6 (410-484)||(235252-235328)
chr6 (427-484)||(30121783-30121840)
[»] chr3 (39 HSPs)
chr3 (393-484)||(54574855-54574946)
chr3 (410-484)||(21582775-21582849)
chr3 (388-507)||(28689366-28689485)
chr3 (410-484)||(54619231-54619305)
chr3 (410-484)||(8073366-8073440)
chr3 (410-484)||(34290664-34290738)
chr3 (410-484)||(44708481-44708555)
chr3 (410-484)||(47467688-47467762)
chr3 (400-484)||(8420320-8420404)
chr3 (356-582)||(25855369-25855600)
chr3 (410-484)||(3953924-3953998)
chr3 (410-484)||(42098805-42098879)
chr3 (410-484)||(53506912-53506986)
chr3 (411-484)||(37168372-37168445)
chr3 (412-484)||(38681121-38681193)
chr3 (410-484)||(9878715-9878789)
chr3 (393-484)||(26279527-26279620)
chr3 (410-484)||(27078597-27078671)
chr3 (410-484)||(27084394-27084468)
chr3 (414-484)||(36605973-36606042)
chr3 (410-484)||(43207266-43207339)
chr3 (410-484)||(50939261-50939335)
chr3 (410-484)||(53149342-53149416)
chr3 (418-484)||(54407186-54407252)
chr3 (400-479)||(789930-790009)
chr3 (523-582)||(23641244-23641303)
chr3 (410-477)||(29620423-29620490)
chr3 (373-484)||(32319183-32319296)
chr3 (414-484)||(36716053-36716123)
chr3 (396-479)||(29598097-29598179)
chr3 (393-484)||(49393078-49393167)
chr3 (412-484)||(18372485-18372561)
chr3 (400-479)||(52374650-52374729)
chr3 (521-570)||(790314-790363)
chr3 (410-455)||(48157143-48157188)
chr3 (393-445)||(52973383-52973435)
chr3 (525-587)||(54574745-54574807)
chr3 (522-587)||(36179479-36179544)
chr3 (521-582)||(49393207-49393267)
[»] scaffold0097 (2 HSPs)
scaffold0097 (398-484)||(38914-39000)
scaffold0097 (523-582)||(39045-39104)
[»] scaffold1320 (1 HSPs)
scaffold1320 (401-582)||(1346-1530)
[»] scaffold0039 (1 HSPs)
scaffold0039 (410-484)||(106539-106613)
[»] scaffold0007 (1 HSPs)
scaffold0007 (387-484)||(230887-230984)
[»] scaffold0022 (4 HSPs)
scaffold0022 (393-484)||(40069-40160)
scaffold0022 (393-484)||(138129-138220)
scaffold0022 (521-575)||(40203-40257)
scaffold0022 (521-575)||(138263-138317)
[»] scaffold0070 (1 HSPs)
scaffold0070 (410-484)||(1344-1418)
[»] scaffold0004 (1 HSPs)
scaffold0004 (93-177)||(336708-336792)
[»] scaffold0227 (1 HSPs)
scaffold0227 (398-477)||(16016-16095)
[»] scaffold0003 (3 HSPs)
scaffold0003 (401-484)||(351362-351445)
scaffold0003 (388-446)||(350274-350332)
scaffold0003 (521-587)||(351257-351323)
[»] scaffold0001 (1 HSPs)
scaffold0001 (410-455)||(181920-181965)


Alignment Details
Target: chr7 (Bit Score: 551; Significance: 0; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 551; E-Value: 0
Query Start/End: Original strand, 19 - 851
Target Start/End: Original strand, 12980939 - 12981771
Alignment:
Q  19 atataactccaccttctacggcattgtttggttacacgttttagtcacttttctcgcgttccagtgtcttgttaccgtgataattgtgaagcttgaaatt 118  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||    
T  12980939 atataactccaccttctactgcattgtttggttacacgtttgagtcacttttctcgcgttccaatgtcttgttatcctgataattgtgaagcttgaaatt 12981038  T
Q  119 gtggagttagataaacgcattgtgggaggcaaattcaacacggtaacaaacacacgctacgccatcttcctcacgaaaattcagttttcctcttgtgaaa 218  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12981039 gtggagttagataaacgcacggtgggaggcaaattcaacacggtaacaaatacacgctacgccatcttcctcacgaaaattcagttttcctcttgtgaaa 12981138  T
Q  219 cttgtggcatttcttcttaagtgcattccttcattaaaaagctgtgaaacatgtgtgcaattagggccgggccttggggtgtgtaaactgttcaatggaa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||| | |||||||||    
T  12981139 cttgtggcatttcttcttaagtgcattccttcattaaaaagctgtgaaacatgtgtgcaattagggccggaccttggg--gtgtaaaccgctcaatggaa 12981236  T
Q  319 ctaggcatccctaaaacatgggcctcaaannnnnnnnatagcccaatagtattgctaagtggtaggtgggtttgttgggagggtggtttgaggttcctca 418  Q
     | |||||||||||||||||||||||||         |||| ||||||||||||||||||| ||||||||| |||||  |||||||||||||||||||||    
T  12981237 ttgggcatccctaaaacatgggcctcaatttttttttatag-ccaatagtattgctaagtgttaggtgggtgtgttgaaagggtggtttgaggttcctca 12981335  T
Q  419 tgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttttnnnnnnnttaaatagaacattc-tcctttnnnnn 517  Q
    | ||||| ||||||||||||||||||| | ||||||| |||||| || ||||||||||||||||||       ||||||||||||||| || |||         
T  12981336 tatatacagtagtgattttcacctttgtgtgtaccgcgtatatatggaaccttgtatttatcttttaaaaaaattaaatagaacattcttcttttataaa 12981435  T
Q  518 nnncatttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggccttgtctgcaatagtcggaaaaagagacgaa 617  Q
       ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| |||||| ||||||||||||| ||||||||| |||    
T  12981436 aaacatttttattttattacgagcctcttttcacctacagaaccgaacctccggattcgtaggaacggccttatctgcaatagtcgtaaaaagagaggaa 12981535  T
Q  618 taaatgaaaatagtaaatggttagttaaatgcccaacataattttgtaaaataataaaatacacttgttaagagttccacctcttatcaaaccaagtttg 717  Q
    | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12981536 tcaatgaaaatagtaaatggttagttaaatggccaacataattttgtaaaataataaaatacacttgttcagagttccacctcttatcaaaccaagtttg 12981635  T
Q  718 taaagagaggaggaaaaatccaacaccaaaatcacgatgatgacagaaagcttgtgat---gtagtaaggaagttccatatcttcttatattttagactt 814  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||   ||| |||||||||||||||||||||||| ||||||||||    
T  12981636 taaagagaggagg-aaaatccaacaccaaaattacgatgatgacagaaagcttgtgatgaggtaataaggaagttccatatcttcttattttttagactt 12981734  T
Q  815 ccccgagtgctattttgaagaggtatccattgttcat 851  Q
    ||||||||| ||||||||||||| |||| ||||||||    
T  12981735 ccccgagtgttattttgaagaggcatcctttgttcat 12981771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 6765824 - 6765610
Alignment:
Q  371 tgctaagtggtaggtgggtttgtt---gggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggca 467  Q
    ||||||||| ||||||||| ||||   || |||||||||||||||| ||| | ||||||||||||||||||||||||||  |||| ||||||||||| ||    
T  6765824 tgctaagtgttaggtgggtgtgtttttggaagggtggtttgaggttactcttatatacggtagtgattttcacctttggatgtacggcttatatacgaca 6765725  T
Q  468 ccttgtatttatcttttnnnnnnnttaaatagaacattctcctttnnnnnnnncatttttattttattacgagcttcttttcacctacagaaccgagcct 567  Q
    |||||||||||||||||       |||||||||||||| | ||||        | ||||||||||||||||||| |||||||| ||||||||| ||||||    
T  6765724 ccttgtatttatcttttaaaaaatttaaatagaacattgttctttaaaaaaaacttttttattttattacgagcctcttttcatctacagaactgagcct 6765625  T
Q  568 ccagattcgtaggaa 582  Q
    || ||||||||||||    
T  6765624 ccggattcgtaggaa 6765610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 393 - 484
Target Start/End: Complemental strand, 9021917 - 9021827
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||    
T  9021917 ttgggagggtggtttgaggt-cctcatgtatacggtagtgattttcacctttgggtgtaccgcatatatacggcacattgtatttatctttt 9021827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 393 - 483
Target Start/End: Original strand, 7398435 - 7398525
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttt 483  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||| | | |||||| ||||||||||||||||||||    
T  7398435 ttgggagggtggtttgaggttcctcatgtatatggtagtgattttcacctttaggtgtatcacatatatatggcaccttgtatttatcttt 7398525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 690 - 814
Target Start/End: Original strand, 13065086 - 13065209
Alignment:
Q  690 agttccacctcttatcaaaccaagtttgtaaagagaggaggaaaaatccaacacca-aaatcacgatgatgacagaaagcttgtgatgtagtaaggaagt 788  Q
    |||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||| | | ||||||| ||  |||||||||||||||||| ||||||||    
T  13065086 agttccacctcttatcgaaccaagtttgtagagagaggaagaaaaatcaaacaccatagaccacgatggtg--agaaagcttgtgatgtagcaaggaagt 13065183  T
Q  789 tccatatcttcttatattttagactt 814  Q
    |||||||||||| || ||| ||||||    
T  13065184 tccatatcttctcatttttgagactt 13065209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 23859057 - 23859148
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||| ||| ||| ||||||||| || |||||||||||||||    
T  23859057 ttgggagggtggtttgaggatcctcatgtatacggtagtaattttcatctttgggtgtatcgcatatatacggtacattgtatttatctttt 23859148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 394 - 582
Target Start/End: Complemental strand, 2611379 - 2611187
Alignment:
Q  394 tgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttttnnnnnnntt 493  Q
    ||||||| | |||||||||||||||||||||| || |||||||||||| ||| | ||||||| |||||||| |||||||||||||||||||       ||    
T  2611379 tgggaggatcgtttgaggttcctcatgtatacagttgtgattttcaccattgtgtgtaccgcatatatacgacaccttgtatttatcttttaaaaaattt 2611280  T
Q  494 aaatagaacattctccttt----nnnnnnnncatttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    |||||||||||| | ||||            | ||||||||||||||| ||| ||||||||| | ||||||||||||||| ||||| ||||||    
T  2611279 aaatagaacattgttcttttaaaaaaaaatacttttttattttattacaagcctcttttcacttgcagaaccgagcctccggattcataggaa 2611187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 20091382 - 20091308
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  20091382 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttt 20091308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 8171640 - 8171566
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||| || |||| ||||||| ||||||||||||||||||||||||||||    
T  8171640 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatctttt 8171566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 48983945 - 48983871
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||||| ||||||||||||    
T  48983945 ggttcctcatgtatacggtagttattttcacctttgggtgtaccgcatatatacgacaccttatatttatctttt 48983871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 393 - 476
Target Start/End: Original strand, 36891562 - 36891645
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatt 476  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||  |||||||  ||| |||||||    
T  36891562 ttgggaggatggtttgaggttcctcatgtatacggtagtgattttcacctttggatgtaccgaatatatacaacacattgtatt 36891645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 10955485 - 10955559
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||| || | ||||||| ||||||||||||||| ||||||||||||    
T  10955485 ggttcctcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttatatttatctttt 10955559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 18776867 - 18776793
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||| ||||||||||||||||| |||||||| | |||| ||||||| ||||||||||||||||||||||||||||    
T  18776867 ggtttctcatgtatacggtagtcattttcacatctgggtgtaccgcatatatacggcaccttgtatttatctttt 18776793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 23551172 - 23551098
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||  ||||||| |||||||| |||||| ||||||||||||    
T  23551172 ggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatctttt 23551098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 24525786 - 24525712
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||| |||| |||||||||| ||||||||||||    
T  24525786 ggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatacacggcaccttatatttatctttt 24525712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 29077221 - 29077295
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||| | || ||||||| |||||||| |||||||||||||||||||    
T  29077221 ggttcctcatgtatacggtagtcattttcacctcttggtgtaccgcatatatacgacaccttgtatttatctttt 29077295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 47985071 - 47984997
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||||| || ||||||||||||||| ||||||| ||||||||||||||| ||||| ||||||    
T  47985071 ggttcctcatgtatacggtggtcattttcacctttgggtgtaccgcatatatacggcaccttatatttttctttt 47984997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 410 - 483
Target Start/End: Complemental strand, 12596388 - 12596315
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttt 483  Q
    ||||||||||| |||||||||| |||||||||| |||| ||||| | |||||||||||||||||||||||||||    
T  12596388 ggttcctcatgcatacggtagtcattttcacctctgggtgtaccacatatatacggcaccttgtatttatcttt 12596315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 393 - 444
Target Start/End: Complemental strand, 27237541 - 27237490
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcaccttt 444  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27237541 ttgggagggtggtttgaggttcctcatgtatacgatagtgattttcaccttt 27237490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 393 - 447
Target Start/End: Complemental strand, 9014880 - 9014826
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttggg 447  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  9014880 ttgggagggtgatttgaggttactcatgtatacggtagtgattttcacctttggg 9014826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 38414977 - 38414903
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||| ||||| ||||||||||||||| ||||| | |||||||| |||||| ||||||||||||    
T  38414977 ggttcctcatgtatacagtagtcattttcacctttgggtgtaccacatatatacgtcaccttatatttatctttt 38414903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 10329511 - 10329437
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||| ||||||||||||||||| |||||||||||||||  | || | ||||||||||||||| ||||||||||||    
T  10329511 ggtttctcatgtatacggtagtcattttcacctttgggttttcctcatatatacggcaccttatatttatctttt 10329437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 19692095 - 19692169
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||  ||| |||||||||||| || ||||||| |||||| |||||||| ||||||||||||    
T  19692095 ggttcctcatgtatacgaaagtcattttcacctttaggtgtaccgcatatatatggcaccttatatttatctttt 19692169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 398 - 484
Target Start/End: Original strand, 20153190 - 20153276
Alignment:
Q  398 agggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||| | |||||||||||||| ||||||||||| |||||||  || ||| |||||||  ||| |||||||||||||||    
T  20153190 agggtggtttgagatccctcatgtatacggcagtgattttcatctttgggtttatcgcatatatacaacactttgtatttatctttt 20153276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 414 - 484
Target Start/End: Original strand, 28749715 - 28749784
Alignment:
Q  414 cctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||| |||||||| | || | ||||||| ||||||||||||||||||||||||||||    
T  28749715 cctcatgtatacggtagt-attttcacatctgagtgtaccgcatatatacggcaccttgtatttatctttt 28749784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 177
Target Start/End: Complemental strand, 12557764 - 12557680
Alignment:
Q  93 ccgtgataattgtgaagcttgaaattgtggagttagataaacgcattgtgggaggcaaattcaacacggtaacaaacacacgcta 177  Q
    |||||||| ||||||||||| ||||||| |||||||| |||  ||  |||||||||||| |||||  ||||||||||||||||||    
T  12557764 ccgtgatatttgtgaagcttaaaattgtagagttagaaaaaatcacggtgggaggcaaaatcaacgtggtaacaaacacacgcta 12557680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 396 - 484
Target Start/End: Original strand, 18201124 - 18201212
Alignment:
Q  396 ggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||||||| || ||||  |||||||||| || || ||||| | |||||| |||| ||||||||||| ||||    
T  18201124 ggagggtggtttgaggttcctcatgtgtaaggtaacgattttcacccttaggtgtaccacatatatatggcatcttgtatttatatttt 18201212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 393 - 484
Target Start/End: Complemental strand, 12419613 - 12419522
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| ||||||  ||| | |  ||||| || || |||||||||||||||    
T  12419613 ttgggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatctttt 12419522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 421 - 484
Target Start/End: Original strand, 23744808 - 23744871
Alignment:
Q  421 tatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||| | |||| || ||||||| ||||| ||||||||||||||||||||||    
T  23744808 tatacggtagtgatttttatctttaggtgtaccgcatatatgcggcaccttgtatttatctttt 23744871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 433 - 484
Target Start/End: Original strand, 26254017 - 26254068
Alignment:
Q  433 attttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  26254017 attttcatctttgggtgtaccgcatatatacggcaccttgtatttatctttt 26254068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 433 - 484
Target Start/End: Complemental strand, 33162417 - 33162366
Alignment:
Q  433 attttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||| || ||||||| ||||||||||||||||||||||||||||    
T  33162417 attttcacctttaggtgtaccgcatatatacggcaccttgtatttatctttt 33162366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 393 - 475
Target Start/End: Complemental strand, 17800339 - 17800257
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtat 475  Q
    |||||| ||||||||||  ||||||||| ||||||||||||||||||| |||||| ||||  | |||||||| || |||||||    
T  17800339 ttgggatggtggtttgaaattcctcatgcatacggtagtgattttcacttttgggtgtacaacatatatacgacaacttgtat 17800257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 521 - 587
Target Start/End: Complemental strand, 23020471 - 23020406
Alignment:
Q  521 catttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
    ||||||||||||||||||  | ||||||||| |||||||||| ||||||||||||||||||| ||||    
T  23020471 catttttattttattacggacctcttttcacttacagaaccg-gcctccagattcgtaggaacggcc 23020406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 31940109 - 31940171
Alignment:
Q  115 aattgtggagttagataaacgcattgtgggaggcaaattcaacacggtaacaaacacacgcta 177  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||  | ||||||||||||||||    
T  31940109 aattgtgaagttagataaaagcatggtgggaggcaaattcaacgtgctaacaaacacacgcta 31940171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 388 - 445
Target Start/End: Complemental strand, 23020606 - 23020549
Alignment:
Q  388 gtttgttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttg 445  Q
    |||| ||| |||| || ||||| |||||||||||||||||||||||||||||||||||    
T  23020606 gttttttgagaggatgatttgaagttcctcatgtatacggtagtgattttcacctttg 23020549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 410 - 455
Target Start/End: Original strand, 25010434 - 25010479
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgc 455  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||    
T  25010434 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgc 25010479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 8239688 - 8239762
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||| ||||||||| | |||||||| |||||| ||||| | |||||||||||| || ||||||| ||||    
T  8239688 ggttcctcatatatacggtaatcattttcacatttgggtgtaccacatatatacggcacattatatttatttttt 8239762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 356 - 484
Target Start/End: Complemental strand, 21763745 - 21763614
Alignment:
Q  356 atagcccaatagtattgctaagtggtaggtg---ggtttgttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtac 452  Q
    |||||| ||||||||| ||||||  ||||||   | ||| ||||||||||| |||||| ||| | ||| ||  ||||||||||||||| ||| || |||     
T  21763745 atagcctaatagtattactaagtattaggtgaatgtttttttgggagggtgatttgagattcttgatgcatctggtagtgattttcactttttggtgtat 21763646  T
Q  453 cgcttatatacggcaccttgtatttatctttt 484  Q
    ||| ||||||||  || |||||||||||||||    
T  21763645 cgcatatatacgatactttgtatttatctttt 21763614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 411 - 484
Target Start/End: Original strand, 38971255 - 38971328
Alignment:
Q  411 gttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||| ||| |||||||||||||||||| ||| || |||   | |||||||| |||||||||||||||||||    
T  38971255 gttcctcgtgtttacggtagtgattttcacatttaggtgtataacatatatacgacaccttgtatttatctttt 38971328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 413 - 481
Target Start/End: Complemental strand, 36903022 - 36902954
Alignment:
Q  413 tcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatct 481  Q
    ||||||||||||| ||| |||||||||||||| || ||||  | |||||||| || |||||||||||||    
T  36903022 tcctcatgtatacagtactgattttcacctttaggtgtacaacatatatacgacatcttgtatttatct 36902954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 587
Target Start/End: Original strand, 23744911 - 23744977
Alignment:
Q  521 catttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
    |||||||||||| ||||| || ||||||||| || ||| | ||||||||| ||||||||||| ||||    
T  23744911 catttttatttttttacgggcctcttttcacttatagagctgagcctccaaattcgtaggaacggcc 23744977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 31940048 - 31940118
Alignment:
Q  39 gcattgtttggttacacgttttagtcacttttctcgcgttccagtgtcttgttaccgtgataattgtgaag 109  Q
    |||||||||||||||| |||| |||||||||||| |||| ||| ||   || || ||||||||||||||||    
T  31940048 gcattgtttggttacatgtttgagtcacttttcttgcgtcccaatgctctgctatcgtgataattgtgaag 31940118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 526 - 587
Target Start/End: Complemental strand, 12419477 - 12419416
Alignment:
Q  526 ttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
    ||||||||||||| || ||||||||| |||| | |||||||||| ||||| |||||| ||||    
T  12419477 ttattttattacgggcctcttttcacttacaaagccgagcctccggattcataggaacggcc 12419416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 2e-48; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 281 - 587
Target Start/End: Complemental strand, 39332639 - 39332330
Alignment:
Q  281 agggccgggccttggggtgtgtaaactgttcaatggaactaggcatccctaaaacatgggcctcaaannnnnnnnatagcccaatagtattgctaagtgg 380  Q
    |||| ||| ||||||| |||| |||| | ||||||||||| | |||||| ||  ||||||||||| |        |||| ||||||||| |  |||||      
T  39332639 agggtcggaccttgggatgtgcaaaccgctcaatggaactggacatccccaaggcatgggcctcataaaagaattatagtccaatagtactattaagttt 39332540  T
Q  381 taggtgggtttgtt---gggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtattt 477  Q
    ||||||||| ||||   | ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| | ||||||||||||    
T  39332539 taggtgggtgtgtttttgagagggtggtttgaggttcctcatgtatacggtagtgattttcacctttggatgtaccgcttatatatgacaccttgtattt 39332440  T
Q  478 atcttttnnnnnnnttaaatagaacattctcctttnnnnnnnncatttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgt 577  Q
    |||||||       |||||||||||||| | ||||        | ||||||||||||||||||  |||||||||||||||||||||||||||  ||||||    
T  39332439 atctttttaaaaaattaaatagaacattgttctttaaaaaaaacttttttattttattacgagtctcttttcacctacagaaccgagcctccgaattcgt 39332340  T
Q  578 aggaatggcc 587  Q
    ||||| ||||    
T  39332339 aggaacggcc 39332330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 281 - 484
Target Start/End: Original strand, 5721426 - 5721634
Alignment:
Q  281 agggccgggccttggggtgtgtaaactgttcaatggaactaggcatccctaaaacatgggcctcaaannnnnnnn-atagcccaatagtattgctaagtg 379  Q
    |||||||||| |||||||||| |||| | ||||||||||| ||| |||| ||  |||||||||||||         ||||||||||| || |||||||||    
T  5721426 agggccgggctttggggtgtgcaaaccgctcaatggaactgggcctccccaaggcatgggcctcaaaaaaaaaattatagcccaatactactgctaagtg 5721525  T
Q  380 gtaggtgggtttgtt----gggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtat 475  Q
     || |||||| ||||    |||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||| ||||||| ||||||||||||    
T  5721526 ttaagtgggtgtgttttttgggagggtggtttgaggttcctcaggtatacggtagtgattttcacttttgggtgtaccgattatatagggcaccttgtat 5721625  T
Q  476 ttatctttt 484  Q
    |||||||||    
T  5721626 ttatctttt 5721634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 5942680 - 5942771
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||| || ||||||||||||||||    
T  5942680 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggtgtaccgcacatatacgacatcttgtatttatctttt 5942771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 393 - 484
Target Start/End: Complemental strand, 7944641 - 7944550
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||  | ||||||||||||||||||||||| ||||    
T  7944641 ttgggatggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacggcaccttgtatttatttttt 7944550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 389 - 484
Target Start/End: Original strand, 11290164 - 11290259
Alignment:
Q  389 tttgttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| | ||||  | |||||||| |||||||||||||||||||    
T  11290164 tttgttgggatggtggtttgaggttgctcatgtatacggtagtgattttcacctttgagtgtacaacatatatacgacaccttgtatttatctttt 11290259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 403 - 484
Target Start/End: Original strand, 8102906 - 8102987
Alignment:
Q  403 ggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||||||||||||| |||||||||||||| || ||||||| ||||||| ||||||||||||||||||||    
T  8102906 ggtttgaggttcctcatgtatacggtaatgattttcacctttaggtgtaccgcatatatactgcaccttgtatttatctttt 8102987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 39 - 176
Target Start/End: Original strand, 24769458 - 24769597
Alignment:
Q  39 gcattgtttggttacacgtttt--agtcacttttctcgcgttccagtgtcttgttaccgtgataattgtgaagcttgaaattgtggagttagataaacgc 136  Q
    ||||||||| ||||||| || |  |||||||||||||  |||||| ||||||| ||| |||||||||| ||||||||| |||||| ||||||||||| ||    
T  24769458 gcattgtttagttacacattattgagtcacttttctcttgttccaatgtcttgctactgtgataattgcgaagcttgagattgtgtagttagataaaagc 24769557  T
Q  137 attgtgggaggcaaattcaacacggtaacaaacacacgct 176  Q
    |  ||| ||||||||||||||  |||||||||||||||||    
T  24769558 acggtgagaggcaaattcaacgtggtaacaaacacacgct 24769597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 393 - 483
Target Start/End: Complemental strand, 25561612 - 25561523
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttt 483  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||| ||||||  || ||| |||||||||||||||||||||||||||    
T  25561612 ttggaagggtggtttgaggttcctcatgtatacggcagtgattttcacatttggg-ttatcgcatatatacggcaccttgtatttatcttt 25561523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 45475818 - 45475892
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  45475818 ggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatctttt 45475892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 401 - 582
Target Start/End: Original strand, 15078750 - 15078934
Alignment:
Q  401 gtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttttnnnnnnnttaaataga 500  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||| |||  || ||||||| ||||||| ||||||||||||       |||||||||    
T  15078750 gtggtttgaggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaataga 15078849  T
Q  501 acattctccttt---nnnnnnnncatttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    ||||| | ||||           | ||||||||||||||||  ||||||||||| |||||| | |||||| ||||||||||||||    
T  15078850 acattattcttttaaaaaaaatacgtttttattttattacggacttcttttcacttacagagcagagccttcagattcgtaggaa 15078934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 396 - 484
Target Start/End: Complemental strand, 41677290 - 41677202
Alignment:
Q  396 ggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |  ||| ||| |||||||| || ||||||||||||||||    
T  41677290 ggagggtggtttgaggttcctcatgtatacagtagtgattttcacctttagatgtatcgcatatatacgacatcttgtatttatctttt 41677202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 10917392 - 10917466
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||| |||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  10917392 ggttcctcatgtataaggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttt 10917466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 23606731 - 23606657
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||| ||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  23606731 ggttcctcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacggcaccttatatttatctttt 23606657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 23798363 - 23798289
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||| ||||||||||||||| ||||||||||||    
T  23798363 ggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacggcaccttatatttatctttt 23798289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 30883330 - 30883404
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||| |||||||||||| |||||||||||||||    
T  30883330 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcacattgtatttatctttt 30883404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 42600783 - 42600857
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||| ||||| | ||||||||||||||| ||||||||||||    
T  42600783 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatatacggcaccttatatttatctttt 42600857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 381 - 484
Target Start/End: Complemental strand, 15167547 - 15167443
Alignment:
Q  381 taggtgggtttgttggga-gggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttat 479  Q
    ||||||||||| || ||| |||||||||||||||||||||||||||| ||||||||||||| |||||| ||| ||| |||||||  ||| || |||||||    
T  15167547 taggtgggtttttttggaagggtggtttgaggttcctcatgtatacgatagtgattttcacatttgggtgtatcgcatatatacaacactttatatttat 15167448  T
Q  480 ctttt 484  Q
    |||||    
T  15167447 ctttt 15167443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 367 - 484
Target Start/End: Complemental strand, 23941238 - 23941119
Alignment:
Q  367 gtattgctaagtggtaggtggg--tttgttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacg 464  Q
    ||||| |||| || ||||||||  ||| ||||||||||||||||||||||||| | |||| | | |||||||||| ||||||| ||| |||||||||| |    
T  23941238 gtattactaaatgttaggtggggtttttttgggagggtggtttgaggttcctcgtatatatgattgtgattttcatctttgggtgtatcgcttatatatg 23941139  T
Q  465 gcaccttgtatttatctttt 484  Q
     |||||||||||||||||||    
T  23941138 acaccttgtatttatctttt 23941119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 396 - 582
Target Start/End: Complemental strand, 34048823 - 34048635
Alignment:
Q  396 ggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtacc--gcttatatacggcaccttgtatttatcttttnnnnnnntt 493  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||| ||| |     |||||||| ||| |||||||||||||||       ||    
T  34048823 ggagggtggtatgaggatcctcatgtatacagtagtgattttcatctttgggtgtatcatatatatatacgacacattgtatttatcttttaaaatgttt 34048724  T
Q  494 aaatagaacattctcctttnnnnnnnncatttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    |||||||||||| | ||||        |||||||||||||||||| |  | ||||||| |||||| ||||||||||| |||||||||||    
T  34048723 aaatagaacattgttctttaaaaaaaacatttttattttattacgggtctattttcacttacagagccgagcctccaaattcgtaggaa 34048635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 2952323 - 2952249
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||| || |||| ||||||| |||||||||||| |||||||||||||||    
T  2952323 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcactttgtatttatctttt 2952249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 5860846 - 5860772
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||| |||||||||| |||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  5860846 ggtttctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttt 5860772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 13534788 - 13534715
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||| ||||||||||||||||    
T  13534788 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatctttt 13534715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 13624328 - 13624255
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||| ||||||||||||||||    
T  13624328 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatctttt 13624255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 400 - 484
Target Start/End: Complemental strand, 5973219 - 5973135
Alignment:
Q  400 ggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||| ||||||||||| ||||||||| || |||| ||||  | |||||||| |||||||||||||||||||    
T  5973219 ggtggtttgaggttcctcgtgtatacggtaatgattttcatctatgggtgtacaacatatatacgacaccttgtatttatctttt 5973135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 430 - 582
Target Start/End: Complemental strand, 30674485 - 30674330
Alignment:
Q  430 gtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttttnnnnnnnttaaatagaacattctcctttnnnnnnnn---catttt 526  Q
    |||||||||||||||| | ||| ||| |||||||| |||||| ||||||||||||       |||||||||||||| | ||||           | ||||    
T  30674485 gtgattttcacctttgagtgtatcgcatatatacgacaccttatatttatcttttaaaacatttaaatagaacattgttctttaaaaaaaaatacgtttt 30674386  T
Q  527 tattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||    
T  30674385 tattttattacgagcctcttttcacttacagagccgagcctccagattcgtaggaa 30674330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 400 - 484
Target Start/End: Complemental strand, 34789974 - 34789890
Alignment:
Q  400 ggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||  || ||||||||||||||||||||||||||||||||| ||||  | |||||||| || ||||||||||||||||    
T  34789974 ggtggtttgatatttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacgacatcttgtatttatctttt 34789890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 3048619 - 3048545
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||| ||||||||||||| ||||||| || | || ||||||| ||||||||||||||||||||||||||||    
T  3048619 ggttcctcgtgtatacggtagtcattttcatctctaggtgtaccgcatatatacggcaccttgtatttatctttt 3048545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 37430260 - 37430186
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||| |||| | || ||| ||| ||||||||||||||||||||||||||||    
T  37430260 ggttcctcatgtatacggtagtcatttttacctctaggtgtaacgcatatatacggcaccttgtatttatctttt 37430186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 41879182 - 41879256
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||| ||||||||| ||||||| ||||||||||||||  ||||||| ||||||||| ||||||||||||||||||    
T  41879182 ggtttctcatgtattcggtagtcattttcacctttggatgtaccgcatatatacggtaccttgtatttatctttt 41879256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 400 - 484
Target Start/End: Complemental strand, 14510094 - 14510011
Alignment:
Q  400 ggtggtttgaggttcctcatgtatacggtagtga-ttttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||| ||||||||||||||||||| ||||||| |||||| ||||||  |||||||| |||||| ||||| ||||||    
T  14510094 ggtggtttgaggttactcatgtatacggtagtgatttttcacatttgggtgtaccg--tatatacgacaccttatatttgtctttt 14510011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 404 - 484
Target Start/End: Original strand, 8646201 - 8646280
Alignment:
Q  404 gtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||| || ||||||||||||||||||||||| |||| | |||  || ||||||||  ||||||||||||||||||    
T  8646201 gtttgaggtttcttatgtatacggtagtgattttcacatttgcgtgta-tgcatatatacgataccttgtatttatctttt 8646280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 587
Target Start/End: Complemental strand, 38009137 - 38009073
Alignment:
Q  523 tttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
    ||||||||||||||||  ||||||||||  ||||||||||||||||| ||||| |||||| ||||    
T  38009137 tttttattttattacggacttcttttcagttacagaaccgagcctccggattcataggaacggcc 38009073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 582
Target Start/End: Original strand, 5942782 - 5942843
Alignment:
Q  521 catttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    ||||||||||||||||||  | ||||||||| ||||||| ||||| ||| ||||||||||||    
T  5942782 catttttattttattacggtcctcttttcacttacagaatcgagcttccggattcgtaggaa 5942843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 176
Target Start/End: Original strand, 9201894 - 9202031
Alignment:
Q  39 gcattgtttggttacacgttttagtcacttttctcgcgttccagtgtcttgttaccgtgataattgtgaagcttgaaattgtggagttagataaacgcat 138  Q
    ||||||||||||  ||||||| | ||||||||||| | |  || || |||  |||||||||| |||||||| |||||||| | |||||||| ||| |||     
T  9201894 gcattgtttggtatcacgtttgactcacttttctcacttctcaatgccttcctaccgtgatatttgtgaagtttgaaattatagagttagaaaaaagcaa 9201993  T
Q  139 tgtgggaggcaaattcaacacggtaacaaacacacgct 176  Q
     |||||| | ||| ||||   |||||||||||||||||    
T  9201994 ggtgggaagaaaaatcaatgtggtaacaaacacacgct 9202031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 582
Target Start/End: Complemental strand, 15167399 - 15167340
Alignment:
Q  523 tttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    ||||||||||||||||  ||| ||||||| |||||| | |||||| ||||||||||||||    
T  15167399 tttttattttattacggactttttttcacttacagagcagagccttcagattcgtaggaa 15167340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 587
Target Start/End: Complemental strand, 7944510 - 7944444
Alignment:
Q  521 catttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
    ||||||||||||||||||  | ||||||||  ||||||| ||||| ||| |||||||||||| ||||    
T  7944510 catttttattttattacggacctcttttcaattacagaatcgagcttcctgattcgtaggaacggcc 7944444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 582
Target Start/End: Complemental strand, 14509968 - 14509907
Alignment:
Q  521 catttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    |||||||||||||||||| || | ||||||| | |||||||||  ||||| |||||||||||    
T  14509968 catttttattttattacgggcctattttcacttgcagaaccgaatctccaaattcgtaggaa 14509907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 398 - 447
Target Start/End: Complemental strand, 38009252 - 38009204
Alignment:
Q  398 agggtggtttgaggttcctcatgtatacggtagtgattttcacctttggg 447  Q
    ||||||||||||| ||| ||||||||| |||||| |||||||||||||||    
T  38009252 agggtggtttgagtttc-tcatgtatatggtagtaattttcacctttggg 38009204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 393 - 484
Target Start/End: Complemental strand, 377 - 286
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||| |||||||| |||||||||||||||||||    
T  377 ttgggagggtggtttgaggttcatcatgtatacggtagtgattttcacatttgggtgtaccgcatatatacgacaccttgtatttatctttt 286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 70; Significance: 4e-31; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 356 - 582
Target Start/End: Complemental strand, 24151 - 23927
Alignment:
Q  356 atagcccaatagtattgctaagtggtaggtgg--gtttgttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtacc 453  Q
    ||||||||| |||| | ||||||| |||||||  |||| |||||||||||||||||| ||||| ||| |||||||| |||||||||| |||||| |||||    
T  24151 atagcccaacagtactactaagtgttaggtggatgttttttgggagggtggtttgagattccttatgcatacggtaatgattttcacttttgggtgtacc 24052  T
Q  454 gcttatatacggcaccttgtatttatcttttnnnnnnnttaaatagaacattctcctttnnnnnnnncatttttattttattacgagcttcttttcacct 553  Q
    || |||||||| |||||||||||||||||||       |||||||||| ||| | ||||          ||| | |||||||| |||| ||||||||| |    
T  24051 gcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaatattgttctttaaaaat----tttattttttattatgagcctcttttcactt 23956  T
Q  554 acagaaccgagcctccagattcgtaggaa 582  Q
    | ||||||||||||||| |||||||||||    
T  23955 agagaaccgagcctccaaattcgtaggaa 23927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 4e-31; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 400 - 593
Target Start/End: Original strand, 16096998 - 16097194
Alignment:
Q  400 ggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttttnnnnnnnttaaatag 499  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||  | ||||||||||||||||||||||||||||       ||||||||    
T  16096998 ggtggtttgaggttcctcatgtataaggtagtaattttcacctttgggtgtacatcatatatacggcaccttgtatttatcttttaaaaaatttaaatag 16097097  T
Q  500 aacattctccttt---nnnnnnnncatttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggccttgtct 593  Q
    |||||| | ||||           ||| |||||||||||||| ||  |||||||| |||||| ||||||||||| ||||||||||| | ||||||||    
T  16097098 aacattgttcttttaaacaaaatacatatttattttattacgggccacttttcacttacagagccgagcctccaaattcgtaggaacgaccttgtct 16097194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 394 - 484
Target Start/End: Complemental strand, 12134158 - 12134068
Alignment:
Q  394 tgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||| ||| ||||||||| ||||||||||||||||||    
T  12134158 tgggagggtggtttgaggttcctaatgtatacggtagtgattttcacttttgggtgtatcgcatatatacggtaccttgtatttatctttt 12134068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 393 - 584
Target Start/End: Complemental strand, 24035664 - 24035470
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttttnnnnnnnt 492  Q
    |||||||||||||||| | |||||||||||| |||||||||||||||||||| || ||| ||| | ||||||||||||||||||||||||||       |    
T  24035664 ttgggagggtggtttgcgattcctcatgtatgcggtagtgattttcacctttaggtgtatcgcatttatacggcaccttgtatttatcttttaaaaaatt 24035565  T
Q  493 taaatagaacattctccttt---nnnnnnnncatttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatg 584  Q
    ||||||||||||| | ||||           | |||||||||||||||| || ||||||||| |||| || ||||| ||| ||||||||||||||    
T  24035564 taaatagaacattgttcttttaaaagaaatacgtttttattttattacgggcatcttttcacttacaaaatcgagcatccggattcgtaggaatg 24035470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 396 - 582
Target Start/End: Complemental strand, 21665816 - 21665628
Alignment:
Q  396 ggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttttnnnnnnnttaa 495  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| |  ||| | | |||||||| |||| ||||||||||||||       ||||    
T  21665816 ggagggtggtttgtggttcctcatgtatacggtagtgattttcacattttgatgtatcacatatatacgacaccgtgtatttatcttttaaaaaatttaa 21665717  T
Q  496 atagaacattctccttt--nnnnnnnncatttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    |||||||||| | ||||          |||||||||||||||||| |  ||||||||| |||||| |||| ||||||||||||||||||    
T  21665716 atagaacattgttcttttaaaaaaatacatttttattttattacgggtctcttttcacttacagagccgaccctccagattcgtaggaa 21665628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 397 - 484
Target Start/End: Original strand, 38400785 - 38400872
Alignment:
Q  397 gagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||   ||| ||| |||||| | |||||||||||||||||||    
T  38400785 gagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgaatgtatcgcatatatatgacaccttgtatttatctttt 38400872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 9046029 - 9046103
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  9046029 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttt 9046103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 24410437 - 24410511
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  24410437 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttt 24410511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 393 - 479
Target Start/End: Original strand, 37182653 - 37182739
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttat 479  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||  || |||||||| ||||||||||||||    
T  37182653 ttgggagggtgatttgaggttcctcatgtatacggtagtgattttcacttttgggtgtattgcatatatacgacaccttgtatttat 37182739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 388 - 484
Target Start/End: Complemental strand, 28425834 - 28425738
Alignment:
Q  388 gtttgttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||| ||||||||| || |||||||||||||| |||| ||||||||||||||| |||||| |||| || |||||||| |||||||||||||||||||    
T  28425834 gttttttgggagggaggcttgaggttcctcatatatatggtagtgattttcacatttgggtgtactgcatatatacgacaccttgtatttatctttt 28425738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 410 - 482
Target Start/End: Complemental strand, 29939964 - 29939892
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctt 482  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||||||||||||||||    
T  29939964 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatctt 29939892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 393 - 484
Target Start/End: Complemental strand, 11912876 - 11912785
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||  |||  || |||||||||||| |||||||||| ||||    
T  11912876 ttgggagggtggtttgaggttccttatgtatacggtagtgattttcatctttggatgtattgcatatatacggcactttgtatttatttttt 11912785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 3155217 - 3155291
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||| | || ||||||| ||||||||||||||||||||||||||||    
T  3155217 ggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatctttt 3155291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 4505894 - 4505968
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||| |||| |||| ||||||| ||||||||||||||||||||||||||||    
T  4505894 ggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatctttt 4505968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 6965007 - 6965081
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||| |||||||||||| |||||||||||||||    
T  6965007 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcactttgtatttatctttt 6965081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 26716128 - 26716202
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| |||||| |||||||| ||||||||||||    
T  26716128 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatatggcaccttatatttatctttt 26716202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 10762667 - 10762593
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||| ||||| | ||||||| ||||||| ||||||||||||    
T  10762667 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatataccgcaccttatatttatctttt 10762593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 387 - 484
Target Start/End: Complemental strand, 16227493 - 16227396
Alignment:
Q  387 ggtttgttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||| |||||||||||||||||||||||| |||||||  ||||||||||||| || | || ||| | | |||||||| |||||||||||||||||||    
T  16227493 ggttttttgggagggtggtttgaggttccttatgtatatagtagtgattttcatctatcggtgtatcacatatatacgacaccttgtatttatctttt 16227396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 38 - 175
Target Start/End: Complemental strand, 36992640 - 36992503
Alignment:
Q  38 ggcattgtttggttacacgttttagtcacttttctcgcgttccagtgtcttgttaccgtgataattgtgaagcttgaaattgtggagttagataaacgca 137  Q
    |||||||||||||  ||||||| | | |||||||| || | ||| || || | |||||||||| ||||||||||||||||||| |||||||| ||| |||    
T  36992640 ggcattgtttggtatcacgtttgacttacttttcttgcttcccaatgcctggctaccgtgatatttgtgaagcttgaaattgtagagttagaaaaaagca 36992541  T
Q  138 ttgtgggaggcaaattcaacacggtaacaaacacacgc 175  Q
      ||||||||||||  ||||  ||||||||||||||||    
T  36992540 cggtgggaggcaaaaccaacgtggtaacaaacacacgc 36992503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 393 - 484
Target Start/End: Complemental strand, 13800664 - 13800572
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacc-tttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||| |||| ||||||||||||| ||||||  ||||||||||||||| |||||| ||| ||| ||||||||||||||| ||||||||||||    
T  13800664 ttgggaaggtgatttgaggttcctcgtgtatatagtagtgattttcaccttttgggtgtatcgcatatatacggcaccttatatttatctttt 13800572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 3953006 - 3953080
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||| |||||||| | |||||||||| |||| ||||||| | ||||||||||||||||||||||||||    
T  3953006 ggttcctcatgcatacggtaatcattttcacctctgggtgtaccgcatgtatacggcaccttgtatttatctttt 3953080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 7162784 - 7162858
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||| ||||||||||| |||||||||| || |  |||||| ||||||||||||||||||||||||||||    
T  7162784 ggttcctcatatatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatctttt 7162858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 8907181 - 8907107
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||| ||||||||||||||||| ||||| |||| |||| ||||||| |||||||||| |||||||||||||||||    
T  8907181 ggtttctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcgccttgtatttatctttt 8907107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 12337550 - 12337476
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||| |||| ||||| | |||||| | |||||||||||||||||||    
T  12337550 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccacatatatatgacaccttgtatttatctttt 12337476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 395 - 484
Target Start/End: Complemental strand, 22727619 - 22727530
Alignment:
Q  395 gggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||| |||||||||||| |  ||||||||| ||||||||||||||| |||||| ||||||| |||||||| ||| | |||||||||||||    
T  22727619 gggatggtggtttgagggttatcatgtatatggtagtgattttcacttttgggtgtaccgcatatatacgtcacatagtatttatctttt 22727530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 411 - 484
Target Start/End: Complemental strand, 27506841 - 27506768
Alignment:
Q  411 gttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||| ||||| ||||| ||||||||| ||||| | ||||||||||||||| ||||||||||||    
T  27506841 gttcctcatgtatacagtagtcatttttacctttgggtgtaccacatatatacggcaccttatatttatctttt 27506768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 484
Target Start/End: Complemental strand, 7742253 - 7742162
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||| |||||||||||||||||||| ||||| ||||  |||||||||||||  ||| ||| |||||| | ||| |||||||||||||||    
T  7742253 ttgggagagtggtttgaggttcctcatgcatacgatagtatttttcacctttggatgtaacgcatatatatgacacattgtatttatctttt 7742162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 523 - 590
Target Start/End: Complemental strand, 11952575 - 11952508
Alignment:
Q  523 tttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggccttg 590  Q
    |||||||||||||||| |  ||||||||| ||||||||||||||| |||||||||||||| |||||||    
T  11952575 tttttattttattacgggtctcttttcacttacagaaccgagccttcagattcgtaggaacggccttg 11952508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 393 - 439
Target Start/End: Complemental strand, 11952725 - 11952679
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttca 439  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||    
T  11952725 ttgggagggtggtttgaggttcctcatgtatgcagtagtgattttca 11952679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 521 - 582
Target Start/End: Original strand, 42029263 - 42029324
Alignment:
Q  521 catttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    ||||||||| ||||||||| | ||||||||| |||| |||||||||||||||||| ||||||    
T  42029263 catttttatattattacgaacctcttttcacttacaaaaccgagcctccagattcttaggaa 42029324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 5952791 - 5952743
Alignment:
Q  436 ttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  5952791 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttt 5952743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 523 - 582
Target Start/End: Complemental strand, 7742115 - 7742056
Alignment:
Q  523 tttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    |||||||||||| ||| || ||||||||| ||||||||||| ||||| ||||||||||||    
T  7742115 tttttattttatcacgggcctcttttcacttacagaaccgaacctccggattcgtaggaa 7742056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 426 - 484
Target Start/End: Original strand, 34693991 - 34694049
Alignment:
Q  426 ggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||| ||||| |||| |||| ||||| | ||||||||||||||||||||||||||||    
T  34693991 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatctttt 34694049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 426 - 484
Target Start/End: Original strand, 34716403 - 34716461
Alignment:
Q  426 ggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||| ||||| |||| |||| ||||| | ||||||||||||||||||||||||||||    
T  34716403 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatctttt 34716461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 434
Target Start/End: Complemental strand, 37622455 - 37622418
Alignment:
Q  397 gagggtggtttgaggttcctcatgtatacggtagtgat 434  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  37622455 gagggtggtttgaggttcctcgtgtatacggtagtgat 37622418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 522 - 578
Target Start/End: Original strand, 12694794 - 12694850
Alignment:
Q  522 atttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgta 578  Q
    ||||||||||||||||| |  ||||||||| |||||| |||||||||| ||||||||    
T  12694794 atttttattttattacgggtctcttttcacttacagagccgagcctccggattcgta 12694850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 40636164 - 40636212
Alignment:
Q  436 ttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||| |||| ||||||| |||||||| |||||||||||||||||||    
T  40636164 ttcacctctgggtgtaccgcatatatacgacaccttgtatttatctttt 40636212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 582
Target Start/End: Original strand, 37182760 - 37182819
Alignment:
Q  523 tttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    |||||||||||||||| |  ||||||||| |||||| |||||||||| ||||| ||||||    
T  37182760 tttttattttattacgggtctcttttcacttacagagccgagcctccggattcttaggaa 37182819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 526 - 580
Target Start/End: Complemental strand, 12134019 - 12133965
Alignment:
Q  526 ttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtagg 580  Q
    |||||||||||||  | ||||||||| ||||||||||||||||  ||||||||||    
T  12134019 ttattttattacggacctcttttcacttacagaaccgagcctctggattcgtagg 12133965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 68; Significance: 7e-30; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 404 - 512
Target Start/End: Complemental strand, 206597 - 206489
Alignment:
Q  404 gtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttttnnnnnnnttaaatagaaca 503  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| |||||||||||||||||||       ||||||||||||    
T  206597 gtttgaggttcctcatgtatacggtagtgattttcaccattgggtgtaccgcatatatacgacaccttgtatttatcttttacaaaatttaaatagaaca 206498  T
Q  504 ttctccttt 512  Q
    |||| ||||    
T  206497 ttcttcttt 206489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 7e-30; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 393 - 484
Target Start/End: Complemental strand, 38547154 - 38547063
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||| |||||| ||||| | ||||||||||||||||||||||||||||    
T  38547154 ttgggagggtggtttgaggttcctcatgtatatgatagtgattttcacatttgggtgtaccacatatatacggcaccttgtatttatctttt 38547063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 39 - 173
Target Start/End: Complemental strand, 37648883 - 37648750
Alignment:
Q  39 gcattgtttggttacacgttttagtcacttttctcgcgttccagtgtcttgttaccgtgataattgtgaagcttgaaattgtggagttagataaacgcat 138  Q
    ||||||||||||||||||||| || ||||||||| |||| ||| |||| ||||| ||||||||||||||| ||||||||| | |||||||||||| |||     
T  37648883 gcattgtttggttacacgtttgagacacttttcttgcgtcccaatgtcctgttatcgtgataattgtgaaacttgaaattat-gagttagataaaagcac 37648785  T
Q  139 tgtgggaggcaaattcaacacggtaacaaacacac 173  Q
     |||||||||||||| |||  ||||||||||||||    
T  37648784 ggtgggaggcaaattaaacgtggtaacaaacacac 37648750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 393 - 484
Target Start/End: Complemental strand, 39134841 - 39134750
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||  || ||||||| ||||||||||||||||||||    
T  39134841 ttgggagggtggtttgaggttcctcatgtatacagtagtgattatcacctttgggtgtattgcatatatacagcaccttgtatttatctttt 39134750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 5316692 - 5316766
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  5316692 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttt 5316766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 23185439 - 23185513
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  23185439 ggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatctttt 23185513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 393 - 483
Target Start/End: Complemental strand, 43235888 - 43235798
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttt 483  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||  | |||||||| || |||||||||||||||    
T  43235888 ttgggatggtggtttgaggttcctcatgtatacgatagtgattttcacctttgggtgtacatcatatatacgacatcttgtatttatcttt 43235798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 6221650 - 6221860
Alignment:
Q  373 ctaagtggtaggtgggtttgtt---gggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcacc 469  Q
    ||||||| ||||||||| ||||   || |||||||||||||||||||||| |||||| || |||||||||| ||| |  ||||||||||||||||||||     
T  6221650 ctaagtgttaggtgggtgtgtttttggaagggtggtttgaggttcctcatatatacgataatgattttcacattttgatgtaccgcttatatacggcaca 6221749  T
Q  470 ttgtatttatcttttnnnnnnnttaaatagaacattctcctttnnnnnnnnca--tttttattttattacgagcttcttttcacctacagaaccgagcct 567  Q
    |||||||||||||||       |||||||||||||| | ||||         |  |||||||||||||||| |  ||||||||  |||||||||||| ||    
T  6221750 ttgtatttatcttttaaaaat-ttaaatagaacattgttctttaaaaaaaataaatttttattttattacgggtctcttttcatttacagaaccgagtct 6221848  T
Q  568 ccagattcgtag 579  Q
    ||||||||||||    
T  6221849 ccagattcgtag 6221860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 408 - 484
Target Start/End: Original strand, 6771801 - 6771877
Alignment:
Q  408 gaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||| ||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  6771801 gaggttcctcgtgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttt 6771877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 5533307 - 5533398
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||   ||||  | ||||||||||||||||| ||||||||||    
T  5533307 ttgggatggtggtttgagtttcctcatgtatacggtagtgattttcacctttgattgtacatcatatatacggcaccttgtgtttatctttt 5533398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 9173124 - 9173050
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||  ||||||| ||||||||||||||| ||||||||||||    
T  9173124 ggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatctttt 9173050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 9181106 - 9181032
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||  ||||||| ||||||||||||||| ||||||||||||    
T  9181106 ggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatctttt 9181032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 14146312 - 14146386
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||| || |||| ||||||| ||||||||||||||||||||||||||||    
T  14146312 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatctttt 14146386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 388 - 484
Target Start/End: Original strand, 26803938 - 26804031
Alignment:
Q  388 gtttgttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||   | ||| ||| |||||||| || ||||||||||||||||    
T  26803938 gttttttgggagggtggtttgaggtttctcatgtatacggtagtgattttcacctt---gtgtatcgcatatatacgacatcttgtatttatctttt 26804031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 27559649 - 27559723
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||||| ||||||||||||    
T  27559649 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatctttt 27559723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 45758489 - 45758580
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||   | |||||||  ||||||| |||||||||||    
T  45758489 ttgggatggtggtttgaggttcctcatgtatacggtagtgattttcacctttggatgtataacatatatacaacaccttgcatttatctttt 45758580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 1366979 - 1366905
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||||||| ||||||||||||||| ||||||||||||    
T  1366979 ggttcctcgtgtatacggtagtcattttcatctttgggtgtaccgcatatatacggcaccttatatttatctttt 1366905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 4971719 - 4971645
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||| | |||| ||||||| ||||||||| ||||||||||||||||||    
T  4971719 ggttcctcatgtatacggtagtcattttcacttatgggtgtaccgcatatatacggtaccttgtatttatctttt 4971645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 5027561 - 5027635
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||| |||| |||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  5027561 ggttcctcatctatatggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatctttt 5027635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 19955729 - 19955803
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||| ||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||||||||    
T  19955729 ggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatctttt 19955803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 44655753 - 44655827
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||| |||| |||| ||||||| |||||||| |||||||||||||||||||    
T  44655753 ggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacgacaccttgtatttatctttt 44655827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 408 - 484
Target Start/End: Complemental strand, 40501893 - 40501817
Alignment:
Q  408 gaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||| |||||||||||||||| ||||| ||||||||| ||||||| |||||||| |||||| ||||||||||||    
T  40501893 gaggttcttcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacgacaccttatatttatctttt 40501817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 3406430 - 3406504
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||  | | |||| || ||||||||||||||||||||||||||||    
T  3406430 ggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatctttt 3406504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 3440390 - 3440316
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||  | | |||| || ||||||||||||||||||||||||||||    
T  3440390 ggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatctttt 3440316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 17168968 - 17169042
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||| |||||| ||||||||||||||| ||||||| |||||||  |||||| ||||||||||||    
T  17168968 ggttcctcatgtatatggtagtcattttcacctttgggtgtaccgcatatatacaacaccttatatttatctttt 17169042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 396 - 478
Target Start/End: Original strand, 33170757 - 33170839
Alignment:
Q  396 ggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtattta 478  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| || || ||||||| |||||||  ||| |||||||||    
T  33170757 ggagggtggtttaaggtttctcatgtatacggtagtgattttcaccatttggtgtaccgcatatatacaacacattgtattta 33170839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 411 - 484
Target Start/End: Complemental strand, 51607540 - 51607466
Alignment:
Q  411 gttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacgg-caccttgtatttatctttt 484  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||| ||||||||| |||||| ||||||||||||    
T  51607540 gttcctcatgtatacggtagtcattttcacgtttgggtgtaccgcatatatacggccaccttatatttatctttt 51607466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 412 - 484
Target Start/End: Original strand, 16140069 - 16140141
Alignment:
Q  412 ttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||| |||||||||| | || ||||||| |||||||  |||||||||||||||||||    
T  16140069 ttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacaacaccttgtatttatctttt 16140141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 408 - 484
Target Start/End: Original strand, 50881440 - 50881516
Alignment:
Q  408 gaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||| ||||| |||||||||| | |  ||||||| |||||||| |||||||||||||||||||    
T  50881440 gaggttcctcatgtatactgtagtcattttcacctctagatgtaccgcatatatacgacaccttgtatttatctttt 50881516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 480
Target Start/End: Original strand, 38853518 - 38853604
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatc 480  Q
    |||||| | ||||||||||||| |||||||||||||||||||||||||||||||   |||  | |||||||| |||||||||||||||    
T  38853518 ttgggatgatggtttgaggttc-tcatgtatacggtagtgattttcacctttggatatacaacatatatacgacaccttgtatttatc 38853604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 398 - 484
Target Start/End: Complemental strand, 10926067 - 10925981
Alignment:
Q  398 agggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||| ||||||| ||||||||||||||||||||||||||| ||||||  | | | | |||||||||||| |||||||||| ||||    
T  10926067 agggtgatttgaggatcctcatgtatacggtagtgattttcatctttggatgcatctcatatatacggcacattgtatttatttttt 10925981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 419 - 484
Target Start/End: Complemental strand, 21741029 - 21740964
Alignment:
Q  419 tgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||| |||||| |||||||||| |||| ||| ||| ||||||||||||||||||||||||||||    
T  21741029 tgtatatggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatctttt 21740964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 423 - 480
Target Start/End: Original strand, 35392295 - 35392352
Alignment:
Q  423 tacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatc 480  Q
    ||||||||||||||||||||||||   |||||| ||||||||||||||||||||||||    
T  35392295 tacggtagtgattttcacctttggatataccgcatatatacggcaccttgtatttatc 35392352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 587
Target Start/End: Complemental strand, 39134705 - 39134641
Alignment:
Q  523 tttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
    ||||||||||||||||||  ||||||||| ||| || |||||||||| |||||||||||| ||||    
T  39134705 tttttattttattacgagtctcttttcacttacggagccgagcctccggattcgtaggaacggcc 39134641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 41697238 - 41697164
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||| | |||  |||| || ||||||||  || |||||||||||||||    
T  41697238 ggttcctcatgtatacggtagtcattttcacttctggatgtactgcatatatacgatactttgtatttatctttt 41697164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 409 - 483
Target Start/End: Original strand, 50146307 - 50146381
Alignment:
Q  409 aggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttt 483  Q
    |||||||||||||||| |||| ||||||| |||||||||  || | | |||| ||||||||||| ||||||||||    
T  50146307 aggttcctcatgtatagggtaatgatttttacctttgggtctatcacatatacacggcaccttgcatttatcttt 50146381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 13913583 - 13913507
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatata--cggcaccttgtatttatctttt 484  Q
    |||| ||||||||||||||||| |||||||| ||| || ||||||| ||||||  ||||| ||| ||||||||||||    
T  13913583 ggtttctcatgtatacggtagtcattttcacttttaggtgtaccgcatatatacccggcaacttatatttatctttt 13913507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 582
Target Start/End: Complemental strand, 10925939 - 10925880
Alignment:
Q  523 tttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    |||||||||||||||| |||||||||||| || |||  |||||||||| ||| |||||||    
T  10925939 tttttattttattacgggcttcttttcacttagagagtcgagcctccaaatttgtaggaa 10925880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 410 - 453
Target Start/End: Original strand, 44895664 - 44895707
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtacc 453  Q
    |||||||||||||||||||| | ||||||||||||||| |||||    
T  44895664 ggttcctcatgtatacggtaatcattttcacctttgggtgtacc 44895707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 587
Target Start/End: Original strand, 45758622 - 45758688
Alignment:
Q  521 catttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
    ||||||||||||||| ||  | ||||||||| |||||| |||||||||  |||||||||||| ||||    
T  45758622 catttttattttatttcggacctcttttcacttacagagccgagcctctggattcgtaggaacggcc 45758688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 410 - 447
Target Start/End: Complemental strand, 27906818 - 27906781
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttggg 447  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  27906818 ggttcctcatgtatacggtagtcattttcacctctggg 27906781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 3e-29; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 397 - 581
Target Start/End: Complemental strand, 2531009 - 2530823
Alignment:
Q  397 gagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttttnnnnnnnttaaa 496  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||  |||||||| ||| |||||||||||||||       |||||    
T  2531009 gagggtggtttgaggttcctcatgtatacagtagtgattttcacctttggatgtaccgtatatatacgacacattgtatttatcttttaaaaaacttaaa 2530910  T
Q  497 tagaacattctccttt--nnnnnnnncatttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtagga 581  Q
    ||||||||| || |||          |||||||||||||||||| || ||||||||| |||||| || | ||| |||||||||||||    
T  2530909 tagaacattttcttttaagaaaaatacatttttattttattacgggcctcttttcacttacagagccaaaccttcagattcgtagga 2530823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 395 - 484
Target Start/End: Complemental strand, 36868990 - 36868901
Alignment:
Q  395 gggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| | |||||||| |||||||||||||||||||    
T  36868990 gggagggtggtttgagattcctcatgtatacggtagtgattttcacatttgggtgtaccacatatatacgacaccttgtatttatctttt 36868901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 356 - 484
Target Start/End: Complemental strand, 41911773 - 41911642
Alignment:
Q  356 atagcccaatagtattgctaagtggtaggtgggtttgtt---gggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtac 452  Q
    |||| ||||||||| ||||||||| ||||||||| ||||   || |||||| ||||||||||||||| |||||| |||||||||| || |||||| ||||    
T  41911773 atagtccaatagtactgctaagtgttaggtgggtgtgtttttggaagggtgatttgaggttcctcatatatacgatagtgatttttacttttgggtgtac 41911674  T
Q  453 cgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||| |||||||||||| ||||||    
T  41911673 cgcttatatacgacaccttgtatttctctttt 41911642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 34425887 - 34425978
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| | |||| || ||| | | ||||||||||||||||||||||||||||    
T  34425887 ttgggagggtggtttgaggttcctcatgtatacggtaatgattttaatctttaggtgtatcacatatatacggcaccttgtatttatctttt 34425978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 9364292 - 9364366
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  9364292 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttt 9364366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 34756465 - 34756391
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  34756465 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttt 34756391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 396 - 484
Target Start/End: Complemental strand, 14318498 - 14318410
Alignment:
Q  396 ggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||| | | |||||||| |||||||||||||||||||    
T  14318498 ggagggtggtttgaggttcctcatgtatacggtagtgattttcatttttggatgtatcacatatatacgacaccttgtatttatctttt 14318410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 393 - 582
Target Start/End: Complemental strand, 11242434 - 11242243
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttttnnnnnnnt 492  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||  ||| | | |||||||  ||  |||||||||||||||       |    
T  11242434 ttgggagggtggtttgaggttcctcatgtatacggtagtgatttccatctttggttgtatcacatatatacatcattttgtatttatcttttaaaaaaat 11242335  T
Q  493 taaatagaacattctccttt--nnnnnnnncatttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    ||||||||||||| | ||||          | ||||||||||||||||||  ||||||||| |||||| |||||||||| ||||| ||||||    
T  11242334 taaatagaacattgttcttttaaaagaatacgtttttattttattacgagtctcttttcacttacagagccgagcctccggattcataggaa 11242243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 393 - 483
Target Start/End: Complemental strand, 2024758 - 2024668
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttt 483  Q
    |||||||| |||||||||| |||||||||||| |||||||||||||| ||||||| ||| | | |||||||||||| ||||||||||||||    
T  2024758 ttgggaggatggtttgaggatcctcatgtatatggtagtgattttcatctttgggtgtatcacatatatacggcacattgtatttatcttt 2024668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 19523200 - 19523274
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||| |||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  19523200 ggttcctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttt 19523274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 27079012 - 27079086
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||| ||||| |||||||||||| || ||||||| ||||||||||||||||||||||||||||    
T  27079012 ggttcctcatgtatacagtagtcattttcacctttaggtgtaccgcatatatacggcaccttgtatttatctttt 27079086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 28822441 - 28822367
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||| |||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  28822441 ggttcatcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttt 28822367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 388 - 484
Target Start/End: Original strand, 10543653 - 10543748
Alignment:
Q  388 gtttgttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||  ||| ||| |||||||  |||||| ||||||||||||    
T  10543653 gttttttgggagggtggtttgagattcct-atgtatacggtagtgattttcacctttggatgtatcgcatatatacatcaccttatatttatctttt 10543748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 408 - 484
Target Start/End: Complemental strand, 36187980 - 36187904
Alignment:
Q  408 gaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||| ||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||| ||||    
T  36187980 gaggtttctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatatttt 36187904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 16198893 - 16198819
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||| ||| ||| |||||||| |||||| ||||||||||||    
T  16198893 ggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacgacaccttatatttatctttt 16198819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 16799426 - 16799352
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||| | ||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||    
T  16799426 ggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacggcaccttatatttatttttt 16799352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 413 - 587
Target Start/End: Complemental strand, 26719045 - 26718868
Alignment:
Q  413 tcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttttnnnnnnnttaaatagaacattctccttt 512  Q
    ||||||||||| ||||||||||||||||||||| | ||| ||| |||||||| ||| |||||||||||||||       |||||||||||||| | ||||    
T  26719045 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacattattcttt 26718946  T
Q  513 ---nnnnnnnncatttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
               | |||||||||||||||| |  ||||||||| ||||||||||||||||| ||||| |||||| ||||    
T  26718945 aaaaaaaaatacgtttttattttattacgggtctcttttcacttacagaaccgagcctccggattcataggaacggcc 26718868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 413 - 587
Target Start/End: Complemental strand, 26988789 - 26988612
Alignment:
Q  413 tcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttttnnnnnnnttaaatagaacattctccttt 512  Q
    ||||||||||| ||||||||||||||||||||| | ||| ||| |||||||| ||| |||||||||||||||       |||||||||||||| | ||||    
T  26988789 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacattattcttt 26988690  T
Q  513 ---nnnnnnnncatttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
               | |||||||||||||||| |  ||||||||| ||||||||||||||||| ||||| |||||| ||||    
T  26988689 aaaaaaaaatacgtttttattttattacgggtctcttttcacttacagaaccgagcctccggattcataggaacggcc 26988612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 30854330 - 30854404
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||| |||| |||||||||| || | ||||||| ||||||||||||||||||||||||||||    
T  30854330 ggttcctcatgtatacgatagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatctttt 30854404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 38869462 - 38869388
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||||| ||||||||||||    
T  38869462 ggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatctttt 38869388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 1366642 - 1366553
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctt 482  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||| ||| || ||| ||| |||||||  || ||||||||||||||    
T  1366642 ttgggagggtggtatgaggttcctcatatatacggtagtgattttcacatttaggtgtatcgcatatataccacatcttgtatttatctt 1366553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 395 - 484
Target Start/End: Original strand, 2412074 - 2412163
Alignment:
Q  395 gggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||  | | ||| |||||||| ||| |||||||||| ||||    
T  2412074 gggagggtggtttgaggttcctcatgtatacagtagtgattttcacatttggatgcatcgcatatatacgacactttgtatttatttttt 2412163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 411 - 484
Target Start/End: Original strand, 27924084 - 27924157
Alignment:
Q  411 gttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||||||| ||||| ||||||||  ||||||| ||||||||||||||| ||||||||||||    
T  27924084 gttcctcatgtatacggtagtcatttttacctttggatgtaccgcatatatacggcaccttatatttatctttt 27924157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 379 - 484
Target Start/End: Original strand, 33037750 - 33037855
Alignment:
Q  379 ggtaggtgggtttgttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtattta 478  Q
    ||||||||  ||| || ||| |||||||||||||||||||||||||||||| || |||||||||||||| ||||  | ||||||||  | ||||||||||    
T  33037750 ggtaggtgtttttttttggatggtggtttgaggttcctcatgtatacggtaatggttttcacctttgggtgtacaacatatatacgatatcttgtattta 33037849  T
Q  479 tctttt 484  Q
    ||||||    
T  33037850 tctttt 33037855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 410 - 478
Target Start/End: Complemental strand, 23284161 - 23284093
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtattta 478  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||||| |||||||| |||||||||||||    
T  23284161 ggttcctcatgtatacggtagtcattttcatctttgggtgtaccgcatatatacgacaccttgtattta 23284093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 414 - 484
Target Start/End: Original strand, 7670929 - 7670999
Alignment:
Q  414 cctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||| ||||||||||||||| ||||||   |||||||||||||| ||||||||||||    
T  7670929 cctcatgtatacggtagtcattttcacctttgggtgtaccgtaaatatacggcaccttatatttatctttt 7670999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 15480188 - 15480114
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||| |||||||||| |||||||||| |||| ||||||| |||||||| || ||||||||||||||||    
T  15480188 ggttcctcatgcatacggtagtcattttcacctctgggtgtaccgcatatatacgacatcttgtatttatctttt 15480114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 16592173 - 16592099
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||| ||||||||||| |||||||||| |||| ||||||| |||||||| |||| ||||||||||||||    
T  16592173 ggttcctcatatatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccctgtatttatctttt 16592099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 414 - 484
Target Start/End: Complemental strand, 31194706 - 31194637
Alignment:
Q  414 cctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||| |||||||||| ||||  |||||| ||||||||||||||||||||||||||||    
T  31194706 cctcatgtatacggtagt-attttcacctctgggtttaccgcatatatacggcaccttgtatttatctttt 31194637  T

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Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 2274891 - 2274965
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||| ||||||||||||| |||||||||| |||| |||| || ||||||||  ||||||||||||||||||    
T  2274891 ggttcctcgtgtatacggtagtcattttcacctctgggtgtactgcatatatacgataccttgtatttatctttt 2274965  T

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Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 401 - 483
Target Start/End: Original strand, 15639635 - 15639717
Alignment:
Q  401 gtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttt 483  Q
    ||||||| |||||||| |||||||||  ||||||||||| ||||||  ||| ||| |||||||| ||||||||||||||||||    
T  15639635 gtggtttaaggttccttatgtatacgacagtgattttcatctttggatgtatcgcatatatacgtcaccttgtatttatcttt 15639717  T

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Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 22986657 - 22986583
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||| ||||||||||||||||| |||||||||| |||| ||||||| |||||||| ||| |||||||| ||||||    
T  22986657 ggtttctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacgacactttgtatttgtctttt 22986583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 40389635 - 40389561
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||  |||||||||| ||||||||||||||  ||||||| |||||||| |||||| ||||||||||||    
T  40389635 ggttcctcataaatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatctttt 40389561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 398 - 444
Target Start/End: Complemental strand, 40794438 - 40794392
Alignment:
Q  398 agggtggtttgaggttcctcatgtatacggtagtgattttcaccttt 444  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  40794438 agggtggtttgaggtttctcatgtatacggtagtgattttcaccttt 40794392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 44 - 176
Target Start/End: Complemental strand, 36684256 - 36684124
Alignment:
Q  44 gtttggttacacgttttagtcacttttctcgcgttccagtgtcttgttaccgtgataattgtgaagcttgaaattgtggagttagataaacgcattgtgg 143  Q
    |||||||  ||||||| | ||||||||||||| | ||| ||  ||| | |||||||| ||||||||||| ||||||| |||||||| |||  ||  || |    
T  36684256 gtttggtatcacgtttgactcacttttctcgcttcccaatgcattgctgccgtgatatttgtgaagcttaaaattgtagagttagaaaaaaccacggttg 36684157  T
Q  144 gaggcaaattcaacacggtaacaaacacacgct 176  Q
    |||||||| |||||  |||||||||||||||||    
T  36684156 gaggcaaaatcaacgtggtaacaaacacacgct 36684124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 397 - 484
Target Start/End: Original strand, 24395727 - 24395814
Alignment:
Q  397 gagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||| | ||||||||| |||||||| |||||||||||||||||  |||  |  |||||||  |||||||||||||||||||    
T  24395727 gagggtggtttaaagttcctcatctatacggtggtgattttcacctttggatgtattgtatatatacaacaccttgtatttatctttt 24395814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 521 - 587
Target Start/End: Original strand, 27530609 - 27530675
Alignment:
Q  521 catttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
    |||||||||||||||||| || ||||||||| || ||||||||||||| | ||||||||||| ||||    
T  27530609 catttttattttattacgggcctcttttcacttatagaaccgagcctctaaattcgtaggaacggcc 27530675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 484
Target Start/End: Complemental strand, 22648845 - 22648761
Alignment:
Q  400 ggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||| || || ||||| ||||||||| ||||||||||  || || | |||||||| ||| |||||||||||||||    
T  22648845 ggtggtttgaggtttcttatttatacagtagtgattgtcacctttggatgtgccacatatatacgacacattgtatttatctttt 22648761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 433 - 484
Target Start/End: Original strand, 7338023 - 7338074
Alignment:
Q  433 attttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||| || ||||||| |||||||| |||||||||||||||||||    
T  7338023 attttcacctttaggtgtaccgcatatatacgacaccttgtatttatctttt 7338074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 523 - 578
Target Start/End: Complemental strand, 40794309 - 40794254
Alignment:
Q  523 tttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgta 578  Q
    ||||||||||||||||||| ||||||||| |||||| ||||||||||  |||||||    
T  40794309 tttttattttattacgagcctcttttcacttacagagccgagcctccgaattcgta 40794254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 414 - 484
Target Start/End: Complemental strand, 31881528 - 31881459
Alignment:
Q  414 cctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||| ||||||| || |||  || |||| ||||||||||||| ||||||||||||||    
T  31881528 cctcatgtatacggtagt-attttcatctctggatgttccgcatatatacggcaccgtgtatttatctttt 31881459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 587
Target Start/End: Original strand, 33037897 - 33037963
Alignment:
Q  521 catttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
    ||||||||||||||||||||| |||||||   |||||| |||||||||   ||||||||||||||||    
T  33037897 catttttattttattacgagcctcttttcggttacagagccgagcctctgaattcgtaggaatggcc 33037963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 522 - 587
Target Start/End: Complemental strand, 35080756 - 35080691
Alignment:
Q  522 atttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
    |||||||||||||||||  | ||||||||| ||||||  |||||||| ||||||||||||| ||||    
T  35080756 atttttattttattacggccctcttttcacttacagagtcgagcctctagattcgtaggaacggcc 35080691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 393 - 479
Target Start/End: Original strand, 17344940 - 17345026
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttat 479  Q
    |||||| ||||||||||||||| |  || |||||||||| ||||| | ||||||| ||||||| |||| | | || |||||||||||    
T  17344940 ttgggatggtggtttgaggttctttgtggatacggtagtaatttttatctttgggtgtaccgcatatacatgacatcttgtatttat 17345026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 579
Target Start/End: Original strand, 34426018 - 34426076
Alignment:
Q  521 catttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtag 579  Q
    |||||||||||||||||  |  | ||||||| ||||||||||||||| |||||||||||    
T  34426018 catttttattttattacatgtcttttttcacttacagaaccgagccttcagattcgtag 34426076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 15639761 - 15639817
Alignment:
Q  521 catttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgta 578  Q
    ||||||||||| |||||| |||| ||||||| || ||||||||||||||| |||||||    
T  15639761 catttttattt-attacgggcttattttcacttatagaaccgagcctccaaattcgta 15639817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 4e-28; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 400 - 484
Target Start/End: Complemental strand, 4168002 - 4167918
Alignment:
Q  400 ggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  4168002 ggtgatttgaggttcctcatgtataaggtagtgattttcacctttgggtgtatcgcatatatacggcaccttgtatttatctttt 4167918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 394 - 582
Target Start/End: Original strand, 27112020 - 27112210
Alignment:
Q  394 tgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttttnnnnnnntt 493  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||| ||| |||||| | |||||||||||||||||||       ||    
T  27112020 tgggagggtggtttgaggttcctcatgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaattt 27112119  T
Q  494 aaatagaacattctcctttnnnnnnnn--catttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    |||| ||||||| | | ||          || | ||||||||||||| |  ||||||||| |||||||||||||||||||||| |||||||    
T  27112120 aaattgaacattgttcgtttaaaaaaatacaatcttattttattacgggtctcttttcacttacagaaccgagcctccagatttgtaggaa 27112210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 54780783 - 54780857
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  54780783 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttgtatttatctttt 54780857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 393 - 579
Target Start/End: Original strand, 52468275 - 52468463
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttttnnnnnnnt 492  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||  |||   | ||||||||||||||||||||||||||||       |    
T  52468275 ttgggaaggtggtttgaggttcctcatgcatacggtagtgattttcacctttggatgtataacatatatacggcaccttgtatttatcttttaaaaaatt 52468374  T
Q  493 taaatagaacattctccttt--nnnnnnnncatttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtag 579  Q
    ||||||||||||| | ||||          | |||||||||||||||   | |||||||||||||||| ||||||||||  ||||||||    
T  52468375 taaatagaacattgttcttttaaaaaaatacgtttttattttattacagacctcttttcacctacagagccgagcctccgaattcgtag 52468463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 37777324 - 37777250
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  37777324 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttt 37777250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 38209692 - 38209618
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  38209692 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttt 38209618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 43455632 - 43455558
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  43455632 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttt 43455558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 409 - 484
Target Start/End: Complemental strand, 35779427 - 35779352
Alignment:
Q  409 aggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||||||| | ||||||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  35779427 aggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatctttt 35779352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 2790842 - 2790768
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||||||||    
T  2790842 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatctttt 2790768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 38 - 176
Target Start/End: Original strand, 30201533 - 30201671
Alignment:
Q  38 ggcattgtttggttacacgttttagtcacttttctcgcgttccagtgtcttgttaccgtgataattgtgaagcttgaaattgtggagttagataaacgca 137  Q
    |||||||||||||  ||||||| | | ||||||||||| | ||| || || | |||||||||| ||||||||||||||||||| |||||||| ||| |||    
T  30201533 ggcattgtttggtatcacgtttgacttacttttctcgcttcccaatgcctggctaccgtgatatttgtgaagcttgaaattgtagagttagaaaaaagca 30201632  T
Q  138 ttgtgggaggcaaattcaacacggtaacaaacacacgct 176  Q
      ||||||||||||  ||||  |||||||||||||||||    
T  30201633 cggtgggaggcaaaaccaacgtggtaacaaacacacgct 30201671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 40089522 - 40089596
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||  ||||||| ||||||||||||||| ||||||||||||    
T  40089522 ggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatctttt 40089596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 47128993 - 47129067
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||| |||| |||| ||||||| ||||||||||||||||||||||||||||    
T  47128993 ggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatctttt 47129067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 408 - 484
Target Start/End: Complemental strand, 5128945 - 5128869
Alignment:
Q  408 gaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||||| |||||||||| |||| | || || ||||||||||||||||||||||||||||    
T  5128945 gaggttcctcatgtatacggtagtcattttcacctctgggtgcactgcatatatacggcaccttgtatttatctttt 5128869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 396 - 484
Target Start/End: Original strand, 24396926 - 24397014
Alignment:
Q  396 ggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||| | ||| | | ||||||| ||||||| ||||||||||||    
T  24396926 ggagggtagtttgaggttcctcatgtatacgatagtgattttcacctttgagtgtatcacatatatactgcaccttatatttatctttt 24397014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 400 - 484
Target Start/End: Complemental strand, 37745021 - 37744937
Alignment:
Q  400 ggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||  ||| ||| ||||| || |||||| ||||||||||||    
T  37745021 ggtggtttgaggttcctcaagtatacggtagtgattttcacctttggatgtatcgcatatatgcgacaccttatatttatctttt 37744937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 398 - 587
Target Start/End: Complemental strand, 36118571 - 36118380
Alignment:
Q  398 agggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttttnnnnnnnttaaat 497  Q
    ||||||||| |||||| |||||||||||||||||||||||||  |||||| ||| | | |||||||| |||||||||||||||||||       ||||||    
T  36118571 agggtggttagaggttactcatgtatacggtagtgattttcatatttgggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaat 36118472  T
Q  498 agaacattctcc--tttnnnnnnnncatttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
    |||||||| | |  ||         | ||||||||||||||||||| ||||||||| |||| | |||||| |||  ||||||||||| ||||    
T  36118471 agaacattgttcatttaaaaaaatacgtttttattttattacgagcctcttttcacttacaaagccgagcttccgaattcgtaggaacggcc 36118380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 36178662 - 36178752
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||| | ||| ||||||||| ||||||||||||||| |||||| ||| ||| |||||||| |||||||||||||||||||    
T  36178662 ttgggagggtggtttg-gattcttcatgtataaggtagtgattttcacatttgggtgtatcgcatatatacgacaccttgtatttatctttt 36178752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 389 - 484
Target Start/End: Complemental strand, 36362992 - 36362898
Alignment:
Q  389 tttgttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||||||| ||| |||||| |||  || |||||||||||| |||||||||||||||    
T  36362992 tttgttgagagggtggtttgaggttcct-atgtatatggtagtgatttccacatttgggtgtattgcatatatacggcactttgtatttatctttt 36362898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 396 - 484
Target Start/End: Complemental strand, 51692032 - 51691942
Alignment:
Q  396 ggagggtggtttgaggttcctcatgtatacggtagtgattttcac--ctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||||| || |||||| |||||||||||||||   ||| || ||||||| ||||||||||||||||||||||||||||    
T  51692032 ggagggtggtttgaggttcatcgtgtatatggtagtgattttcactttttttggtgtaccgcatatatacggcaccttgtatttatctttt 51691942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 10978906 - 10978980
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||| | |||| ||||||| |||||||| |||||||||||||||||||    
T  10978906 ggttcctcatgtatacggtagtcattttcacttctgggtgtaccgcatatatacgacaccttgtatttatctttt 10978980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 34027585 - 34027659
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||| ||||| ||||||||||||||| ||||||| |||||||| |||||| ||||||||||||    
T  34027585 ggttcctcatgtataccgtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatctttt 34027659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 34768675 - 34768601
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||| | |||||||||| |||| ||||||| ||||||||||||||| ||||||||||||    
T  34768675 ggttcctcatgtatacggtaatcattttcacctctgggtgtaccgcatatatacggcaccttatatttatctttt 34768601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 54083343 - 54083269
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||| | ||||||| ||||||| ||||||||||||||| ||||||||||||    
T  54083343 ggttcctcatgtatacggtagtcatttttatctttgggtgtaccgcatatatacggcaccttatatttatctttt 54083269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 393 - 582
Target Start/End: Complemental strand, 39329510 - 39329318
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttttnnnnnnnt 492  Q
    ||||||||||||||||| ||||||| |||||||||||  |||||||| ||||||| ||| | | |||||||  |||||||||||||||||||       |    
T  39329510 ttgggagggtggtttgatgttcctcctgtatacggtatggattttcatctttgggtgtatcacatatatacaacaccttgtatttatcttttaaaaaatt 39329411  T
Q  493 taaatagaacattctccttt---nnnnnnnncatttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    |||| |||||||| | ||||             ||||||||||||||||  | ||||||||| |||||||||||||||||| |||||||||||    
T  39329410 taaagagaacattgttcttttaaaaaaaatatgtttttattttattacggacctcttttcacttacagaaccgagcctccaaattcgtaggaa 39329318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 37514671 - 37514739
Alignment:
Q  416 tcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||| |||||||||| || | ||||||| ||||||||||||||||||||||||||||    
T  37514671 tcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatctttt 37514739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 398 - 484
Target Start/End: Complemental strand, 10042113 - 10042027
Alignment:
Q  398 agggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||| ||||||||||||| |||||||||||||||||||||| ||| || ||| | | || |||||||||||||||||||| ||||    
T  10042113 agggtgatttgaggttcctcctgtatacggtagtgattttcacatttaggtgtatcacatacatacggcaccttgtatttatttttt 10042027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 418 - 484
Target Start/End: Original strand, 32128598 - 32128664
Alignment:
Q  418 atgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||| ||||||||||||||| ||||||| |||||||| |||||| ||||||||||||    
T  32128598 atgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatctttt 32128664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 32915391 - 32915465
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||| | ||||| |||| |||| ||||| | ||||||||||||||||||||||||||||    
T  32915391 ggttcctcatgtatacggtaatcatttttacctctgggtgtaccacatatatacggcaccttgtatttatctttt 32915465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 48209246 - 48209320
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||| ||||||||||||||||| || ||||| | |||| ||||||| ||||||||||||||||||||||||||||    
T  48209246 ggtttctcatgtatacggtagtcatattcacatctgggtgtaccgcatatatacggcaccttgtatttatctttt 48209320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 431 - 582
Target Start/End: Complemental strand, 39655334 - 39655179
Alignment:
Q  431 tgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttttnnnnnnnttaaatagaacattctcctttnnnnnnnn----catttt 526  Q
    ||||||||||||||||| ||||||| ||||| ||| || |||||||||||||||       |||||||||||||| | ||||            | ||||    
T  39655334 tgattttcacctttgggtgtaccgcatatatgcggaactttgtatttatcttttaaaaaatttaaatagaacattgttctttttaaaaatagaacgtttt 39655235  T
Q  527 tattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    ||||||||||||||| ||||||||||||||||  |||||||||||||| |||||||    
T  39655234 tattttattacgagcctcttttcacctacagagtcgagcctccagatttgtaggaa 39655179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 404 - 484
Target Start/End: Complemental strand, 2135428 - 2135348
Alignment:
Q  404 gtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||| |||||| ||||||| || ||||||||  ||| ||| |||||||| |||||||||||||||||||    
T  2135428 gtttgaggttcctcatatatacgatagtgatgtttacctttggatgtatcgcatatatacgacaccttgtatttatctttt 2135348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 388 - 484
Target Start/End: Original strand, 45656159 - 45656255
Alignment:
Q  388 gtttgttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||| |||||||||||||||||||||| ||||||||||| | ||||||||||| |||||   || ||| |||||| | ||||||| |||||||||||    
T  45656159 gttttttgggagggtggtttgaggttcgtcatgtatacgttcgtgattttcacatttggatttatcgcatatatatgacaccttgcatttatctttt 45656255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 19498510 - 19498582
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||| ||||| ||||||||||||||  |||||||  |||||||||||||| ||||||||||||    
T  19498510 ggttcctcatgtatacagtagtcattttcacctttggctgtaccgc--atatacggcaccttatatttatctttt 19498582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 40217221 - 40217312
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||| |||||||||||||||| |||||||||| | || ||||||||| ||||||  ||| ||| |||||||| |||||| ||||||||||||    
T  40217221 ttggaagggtggtttgaggttactcatgtatatgctaatgattttcatctttggatgtatcgcatatatacgacaccttatatttatctttt 40217312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 13460213 - 13460287
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||| |||||||||||||| |||||||| | ||||  |||||| |||||||| |||||||||||||||||||    
T  13460213 ggttccttatgtatacggtagtcattttcacatctgggtataccgcatatatacgacaccttgtatttatctttt 13460287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 16845027 - 16845101
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||  | |||||||| |||||| ||||||||||||    
T  16845027 ggttcctcatgtatacggtagtcattttcaccgttgggtgtactacatatatacgacaccttatatttatctttt 16845101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 523 - 587
Target Start/End: Original strand, 40217352 - 40217416
Alignment:
Q  523 tttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||||   ||||||||||||||||    
T  40217352 tttttattttattacgagcctcttttcacttacaaaaccgagcctctgaattcgtaggaatggcc 40217416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 408 - 484
Target Start/End: Complemental strand, 10428308 - 10428224
Alignment:
Q  408 gaggttcctcatgtatacggtagtgattttcac--------ctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||||| ||||||||        || |||| ||||||| ||||||||||||||||||||||||||||    
T  10428308 gaggttcctcatgtatacggtagtcattttcacaatttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttt 10428224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 1105538 - 1105612
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||| |||||||||| |||||| |||||||||| | || ||||||| ||||||||  ||||||||||||||||||    
T  1105538 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgataccttgtatttatctttt 1105612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 35465115 - 35465184
Alignment:
Q  412 ttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctt 482  Q
    |||||||||||||||||||| |||||||| ||| || ||||||| ||||||| ||||||| ||||||||||    
T  35465115 ttcctcatgtatacggtagttattttcacttttaggtgtaccgcatatatac-gcaccttttatttatctt 35465184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 410 - 455
Target Start/End: Original strand, 24969443 - 24969488
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgc 455  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||    
T  24969443 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgc 24969488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 17679432 - 17679480
Alignment:
Q  436 ttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  17679432 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttt 17679480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 523 - 590
Target Start/End: Complemental strand, 4167907 - 4167840
Alignment:
Q  523 tttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggccttg 590  Q
    |||||||||||||||| || ||||||||| |||| || ||||||||| |||||||| ||| |||||||    
T  4167907 tttttattttattacgggcctcttttcacttacaaaatcgagcctccggattcgtacgaacggccttg 4167840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 396 - 439
Target Start/End: Original strand, 15735087 - 15735130
Alignment:
Q  396 ggagggtggtttgaggttcctcatgtatacggtagtgattttca 439  Q
    |||||||||||||| ||||||||||||||||||| |||||||||    
T  15735087 ggagggtggtttgaagttcctcatgtatacggtaatgattttca 15735130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 433 - 484
Target Start/End: Original strand, 51964737 - 51964788
Alignment:
Q  433 attttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||| |||| ||| ||| ||||||||||||||||||||||||||||    
T  51964737 attttcacctctgggtgtatcgcatatatacggcaccttgtatttatctttt 51964788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 587
Target Start/End: Original strand, 5893132 - 5893198
Alignment:
Q  521 catttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
    ||||||||||||||||||  | ||||||||| |||||| ||||||||||| ||| ||||||| ||||    
T  5893132 catttttattttattacggacctcttttcacttacagagccgagcctccaaatttgtaggaacggcc 5893198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 422 - 484
Target Start/End: Complemental strand, 16882484 - 16882422
Alignment:
Q  422 atacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||| |||||||||||| || ||||||  |||| |||||||||| ||||||||||||    
T  16882484 atacggtagtcattttcaccttttggtgtaccgtatatacacggcaccttatatttatctttt 16882422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 587
Target Start/End: Complemental strand, 51691899 - 51691841
Alignment:
Q  529 ttttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
    ||||||||||||| ||||||||| | |||| |||||||||| |||||||||||| ||||    
T  51691899 ttttattacgagcctcttttcacttgcagagccgagcctccggattcgtaggaacggcc 51691841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 410 - 455
Target Start/End: Complemental strand, 38352356 - 38352311
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgc 455  Q
    ||||||||||||| |||||||| ||||||||||||||| |||||||    
T  38352356 ggttcctcatgtacacggtagtcattttcacctttgggtgtaccgc 38352311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 587
Target Start/End: Original strand, 24614077 - 24614140
Alignment:
Q  524 ttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
    ||||||||||||||| || ||||||||| |||||| | || |||||||||||||| ||| ||||    
T  24614077 ttttattttattacgggcctcttttcacttacagagctgaacctccagattcgtaagaacggcc 24614140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 587
Target Start/End: Complemental strand, 11906889 - 11906823
Alignment:
Q  521 catttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
    |||||||||||||||||| || ||||||||| || | | ||||||||||  ||||||||||| ||||    
T  11906889 catttttattttattacgggcctcttttcacttatatagccgagcctccgaattcgtaggaacggcc 11906823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 398 - 484
Target Start/End: Complemental strand, 29425287 - 29425201
Alignment:
Q  398 agggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||| ||| ||| || |||||  ||||||||||||    |||| || ||||||||||||||| ||||||| ||||    
T  29425287 agggtggtttgaggttactcgtgtgtatggtagcaattttcacctttaaatgtactgcatatatacggcaccttatatttatttttt 29425201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 410 - 463
Target Start/End: Complemental strand, 23509899 - 23509846
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatac 463  Q
    |||||||||||| ||||||||| |||||||||| | || ||||||| |||||||    
T  23509899 ggttcctcatgtctacggtagtcattttcacctctaggtgtaccgcatatatac 23509846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 582
Target Start/End: Complemental strand, 30507106 - 30507045
Alignment:
Q  521 catttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    |||||||||||||||| | |  ||||||||| |||| || ||||||||| ||||||||||||    
T  30507106 catttttattttattatgggtctcttttcacttacaaaatcgagcctccggattcgtaggaa 30507045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 410 - 447
Target Start/End: Original strand, 55255275 - 55255312
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttggg 447  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  55255275 ggttcctcatgtatacggtagtcattttcacctctggg 55255312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 63; Significance: 6e-27; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 394 - 484
Target Start/End: Complemental strand, 173628 - 173538
Alignment:
Q  394 tgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||| ||||||||||||||||| |||||||||||||||||| ||||||||| ||| ||| ||||||||| ||||||||||||||||||    
T  173628 tgggaggatggtttgaggttcctcacgtatacggtagtgatttttacctttgggtgtatcgcatatatacggtaccttgtatttatctttt 173538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 6e-27; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 394 - 484
Target Start/End: Complemental strand, 2477702 - 2477612
Alignment:
Q  394 tgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||| ||| |||||| | |||||||||||||||||||    
T  2477702 tgggagggtggtttgaggttcctcatgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatctttt 2477612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 393 - 484
Target Start/End: Complemental strand, 21183794 - 21183703
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||||  || |||||||||||||||    
T  21183794 ttgggtgggtggtttgaggttcctcatgtatacggtagtgattttcaactttgggtgtaccacatatatacgctactttgtatttatctttt 21183703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 13727501 - 13727427
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  13727501 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttt 13727427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 20711822 - 20711748
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  20711822 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttt 20711748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 21479498 - 21479572
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  21479498 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttt 21479572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 27788790 - 27788716
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  27788790 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttt 27788716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 33774121 - 33774195
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||| ||||||||||||||||||||||||||||    
T  33774121 ggttcctcatgtatacggtagtcattttcacatttgggtgtaccgcatatatacggcaccttgtatttatctttt 33774195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 393 - 480
Target Start/End: Original strand, 20611777 - 20611864
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatc 480  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||  ||  |||||||| |||||||||||||||    
T  20611777 ttgggagggtagtttgaggttcctcatgtatacggtagtgattttcacctttggatgtgtcgtatatatacgacaccttgtatttatc 20611864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 28075787 - 28075861
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||| ||| ||| ||||||||||||||| ||||||||||||    
T  28075787 ggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacggcaccttatatttatctttt 28075861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 396 - 481
Target Start/End: Original strand, 4036938 - 4037023
Alignment:
Q  396 ggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatct 481  Q
    |||||||||||||| ||||||||| |||||||||||||| || ||||||||| |||||   |||||||||||||||||||||||||    
T  4036938 ggagggtggtttgaagttcctcatatatacggtagtgatctttacctttgggtgtaccatatatatacggcaccttgtatttatct 4037023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 410 - 483
Target Start/End: Complemental strand, 19737794 - 19737721
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttt 483  Q
    |||||||||||||||||||||| |||||||||| | || ||||||| |||||||||||||||||||||||||||    
T  19737794 ggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatcttt 19737721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 411 - 484
Target Start/End: Original strand, 21280550 - 21280623
Alignment:
Q  411 gttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||||||| ||||| |||| |||| ||||||| ||||||||||||||||||||||||||||    
T  21280550 gttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatctttt 21280623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 6159425 - 6159516
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||| ||||||||||||||||||| || |||||||||||||||| ||||||||   ||||||| |||||||| ||| |||||||||||||||    
T  6159425 ttggaagggtggtttgaggttccttatatatacggtagtgatttccacctttgaatgtaccgcatatatacgacacattgtatttatctttt 6159516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 24711101 - 24711027
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||| || | ||||| | ||||||||||||||||||||||||||||    
T  24711101 ggttcctcatgtatacggtagtcattttcacctctgagtgtaccacatatatacggcaccttgtatttatctttt 24711027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 408 - 484
Target Start/End: Original strand, 34397859 - 34397935
Alignment:
Q  408 gaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||| |||| |||| ||||| |||||| || ||||||| |||||||| |||||||||||||||||||    
T  34397859 gaggttcctcatgtttacgatagtcatttttacctttaggtgtaccgcatatatacgtcaccttgtatttatctttt 34397935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 414 - 484
Target Start/End: Complemental strand, 1155947 - 1155877
Alignment:
Q  414 cctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||| |||||||||| |||  ||||||| |||||| | |||||||||||||||||||    
T  1155947 cctcatgtatacggtagtcattttcacctctggatgtaccgcatatatatgacaccttgtatttatctttt 1155877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 17353958 - 17354032
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||| ||||||||||| |||| |||||||| |||||| ||||||| |||||||| |||||| ||||||||||||    
T  17353958 ggttcatcatgtatacgatagtcattttcacatttgggtgtaccgcatatatacgacaccttatatttatctttt 17354032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 30832626 - 30832552
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||| |||||||||| ||||||| || |||| ||||| | ||||||||||| ||||||||||| ||||    
T  30832626 ggttcctcatgcatacggtagtcattttcatctctgggtgtaccacatatatacggcatcttgtatttatttttt 30832552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 582
Target Start/End: Complemental strand, 2477568 - 2477512
Alignment:
Q  526 ttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    ||||||||||||| |  ||||||||| |||||||||||||||||||||| |||||||    
T  2477568 ttattttattacgggtctcttttcacttacagaaccgagcctccagatttgtaggaa 2477512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 433 - 484
Target Start/End: Complemental strand, 27314258 - 27314207
Alignment:
Q  433 attttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||| || | ||||||| ||||||||||||||||||||||||||||    
T  27314258 attttcacctctgagtgtaccgcatatatacggcaccttgtatttatctttt 27314207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 412 - 455
Target Start/End: Original strand, 27994775 - 27994818
Alignment:
Q  412 ttcctcatgtatacggtagtgattttcacctttgggcgtaccgc 455  Q
    |||||||||||||||||||||||||||||||||| | |||||||    
T  27994775 ttcctcatgtatacggtagtgattttcacctttgagtgtaccgc 27994818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 523 - 582
Target Start/End: Original strand, 27994875 - 27994934
Alignment:
Q  523 tttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    ||||||||||||||||||||| ||||| | |||||| |||||| ||| ||||||||||||    
T  27994875 tttttattttattacgagcttattttcgcttacagagccgagcttccggattcgtaggaa 27994934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 235328 - 235252
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatata--cggcaccttgtatttatctttt 484  Q
    |||| ||||||||||||||||| ||||||| ||||||| |||| |  ||||||  ||||||||| ||||||||||||    
T  235328 ggtttctcatgtatacggtagtcattttcatctttgggtgtacggtatatatacccggcaccttatatttatctttt 235252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 427 - 484
Target Start/End: Original strand, 30121783 - 30121840
Alignment:
Q  427 gtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||||||  ||| ||| |||||| | |||||||||||||| ||||    
T  30121783 gtagtgattttcacctttggatgtatcgcatatatatgacaccttgtatttatttttt 30121840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 4e-25; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 393 - 484
Target Start/End: Complemental strand, 54574946 - 54574855
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||| |||||||||||||||||||||| |||||||||||| || |||||| ||||||| ||||||||| ||||||||||||| ||||    
T  54574946 ttgggagggcggtttgaggttcctcatgtatatggtagtgatttttacttttgggtgtaccgcatatatacggtaccttgtatttatatttt 54574855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 21582775 - 21582849
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  21582775 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttt 21582849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 388 - 507
Target Start/End: Complemental strand, 28689485 - 28689366
Alignment:
Q  388 gtttgttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttttnnn 487  Q
    |||| |||||||||| ||||||| || ||||||||||||| ||||||||||||||||||   || ||| ||||||||||||||||||||||||||||       
T  28689485 gttttttgggagggtagtttgagatttctcatgtatacggcagtgattttcacctttggatatatcgcatatatacggcaccttgtatttatctttttga 28689386  T
Q  488 nnnnttaaatagaacattct 507  Q
        ||||||||||||||||    
T  28689385 aaatttaaatagaacattct 28689366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 54619305 - 54619231
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  54619305 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttt 54619231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 8073440 - 8073366
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||| |||||||| |||||||||||||||||||    
T  8073440 ggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacgacaccttgtatttatctttt 8073366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 34290738 - 34290664
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  34290738 ggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttt 34290664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 44708481 - 44708555
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||  ||||||||||||||| ||||||||||||    
T  44708481 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccggatatatacggcaccttatatttatctttt 44708555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 47467688 - 47467762
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||| |||| ||| ||| ||||||||||||||||||||||||||||    
T  47467688 ggttcctcatgtatacggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatctttt 47467762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 400 - 484
Target Start/End: Original strand, 8420320 - 8420404
Alignment:
Q  400 ggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||| | ||||||| |||||||||||| |||||| ||||  | ||||||||||||||||||||||||||||    
T  8420320 ggtggtttgaggttcctcgtatatacggcagtgattttcacatttgggtgtacaacatatatacggcaccttgtatttatctttt 8420404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 356 - 582
Target Start/End: Original strand, 25855369 - 25855600
Alignment:
Q  356 atagcccaatagtattgctaagtggtaggtgggt---ttgttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtac 452  Q
    ||||| |||||||| | ||||||| |||||| ||   || |||||||||||||||||||||| || ||||||||||||||||||||| ||||||| | ||    
T  25855369 atagcacaatagtactactaagtgttaggtgagtgtttttttgggagggtggtttgaggttcttcgtgtatacggtagtgattttcaactttgggtgcac 25855468  T
Q  453 cgcttatatacggcaccttgtatttatcttttnnnnnnnttaaatagaacattctccttt---nnnnnnnncatttttattttattacgagcttcttttc 549  Q
      | |||||||| ||||||||| |||||||||       |||||||||||||| | ||||           |||||||||||||||||| || | |||||    
T  25855469 tacatatatacgacaccttgta-ttatcttttaaaaaatttaaatagaacattgttctttaaaaaaacatacatttttattttattacgggccttttttc 25855567  T
Q  550 acctacagaaccgagcctccagattcgtaggaa 582  Q
    |  |||| |||||||||||||||| || |||||    
T  25855568 atttacataaccgagcctccagatgcgcaggaa 25855600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 3953998 - 3953924
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||  | |||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  3953998 ggttcctcatgtatacggttttcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttt 3953924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 42098805 - 42098879
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||| || |  |||||| ||||||||||||||||||||||||||||    
T  42098805 ggttcctcatgtatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatctttt 42098879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 53506986 - 53506912
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||||||||    
T  53506986 ggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatctttt 53506912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 411 - 484
Target Start/End: Original strand, 37168372 - 37168445
Alignment:
Q  411 gttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||||||| |||||||||||||||  |||| | ||||||||||||||| ||||||||||||    
T  37168372 gttcctcatgtatacggtagtcattttcacctttgggtataccacatatatacggcaccttatatttatctttt 37168445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 412 - 484
Target Start/End: Complemental strand, 38681193 - 38681121
Alignment:
Q  412 ttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||| |||||||||| |||  ||||||| || |||||||||||||||||||||||||    
T  38681193 ttcctcatgtatacggtagtcattttcacctctggatgtaccgcatacatacggcaccttgtatttatctttt 38681121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 9878789 - 9878715
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||    
T  9878789 ggttccttatgtatacgatagtcattttcacctttgggtgtaccgcatatatactgcaccttatatttatctttt 9878715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 26279527 - 26279620
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtata--cggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||||||||||||||||||||||||||||||    ||||||||||||| ||||||| |||  || |||||||| |||||| ||||||||||||    
T  26279527 ttgggagggtggtttgaggttcctcatgtataatgtgtagtgattttcatctttgggtgtattgcatatatacgacaccttctatttatctttt 26279620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 27078671 - 27078597
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||| ||||||||||||||||| |||||||||| ||||  |||||| |||||||||||| |||||||||||||||    
T  27078671 ggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatctttt 27078597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 27084468 - 27084394
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||| ||||||||||||||||| |||||||||| ||||  |||||| |||||||||||| |||||||||||||||    
T  27084468 ggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatctttt 27084394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 414 - 484
Target Start/End: Original strand, 36605973 - 36606042
Alignment:
Q  414 cctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||| ||||||| || |||| ||||||| ||||||||||||||||||||||||||||    
T  36605973 cctcatgtatacggtagt-attttcatctctgggtgtaccgcatatatacggcaccttgtatttatctttt 36606042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 43207339 - 43207266
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||||| |  ||||||| ||||||||||||||| ||||||||||||    
T  43207339 ggttcctcatgtatacggtagtcattttcaccttt-gatgtaccgcatatatacggcaccttatatttatctttt 43207266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 50939335 - 50939261
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||| ||||||||| |||||   ||||||||||||||| ||||||||||||    
T  50939335 ggttcctcatgtatacggtagtcatttttacctttgggtgtaccatatatatacggcaccttatatttatctttt 50939261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 53149416 - 53149342
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||| | || || | ||||||| ||||||||||||||||||||||||||||    
T  53149416 ggttcctcatgtatacggtagtcatttttatctctgagtgtaccgcatatatacggcaccttgtatttatctttt 53149342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 418 - 484
Target Start/End: Complemental strand, 54407252 - 54407186
Alignment:
Q  418 atgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||||||||||||| ||||||||||||    
T  54407252 atgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatctttt 54407186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 789930 - 790009
Alignment:
Q  400 ggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttat 479  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||||||| ||||  | |||||| | ||||||||||||||    
T  789930 ggtggtttgaggttcctcatgtatatggtggtgatttttacctttgggtgtacaacatatatatgacaccttgtatttat 790009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 523 - 582
Target Start/End: Complemental strand, 23641303 - 23641244
Alignment:
Q  523 tttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    |||||||||||| ||| |  ||||||||||||||||||||||||||||||||||||||||    
T  23641303 tttttattttatcacgggtctcttttcacctacagaaccgagcctccagattcgtaggaa 23641244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 29620490 - 29620423
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtattt 477  Q
    |||||||||||||||||||||| |||||||||| |||   |||||| |||||||||||||||||||||    
T  29620490 ggttcctcatgtatacggtagtcattttcacctctggatataccgcatatatacggcaccttgtattt 29620423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 373 - 484
Target Start/End: Complemental strand, 32319296 - 32319183
Alignment:
Q  373 ctaagtggtaggtgggtttgttg--ggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcacct 470  Q
    ||||||| ||||||||| ||||   |||| || |||||||||||||| | |||| | |||| ||||||||||||||| ||||||| |||||||  ||| |    
T  32319296 ctaagtgttaggtgggtatgtttttggagagtagtttgaggttcctcgtatataagatagtaattttcacctttgggtgtaccgcatatatacaacactt 32319197  T
Q  471 tgtatttatctttt 484  Q
    ||||||||||||||    
T  32319196 tgtatttatctttt 32319183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 414 - 484
Target Start/End: Complemental strand, 36716123 - 36716053
Alignment:
Q  414 cctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||| ||||||||| ||  ||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  36716123 cctcacgtatacggtggtcgttttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttt 36716053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 396 - 479
Target Start/End: Original strand, 29598097 - 29598179
Alignment:
Q  396 ggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttat 479  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||| ||||| | ||| | | ||||||||| |||||||||||||    
T  29598097 ggaggctggtttgagattcctcatgtatacggtagtga-tttcatctttgagtgtatcacatatatacggaaccttgtatttat 29598179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 49393078 - 49393167
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||| |||| |||||||||| |||||||||||||||| ||||| ||||||||| ||| | | |||||||| | |||||||||||||||||    
T  49393078 ttgggatggtgatttgaggttc-tcatgtatacggtagtaatttttacctttgggtgta-cacatatatacgacgccttgtatttatctttt 49393167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 412 - 484
Target Start/End: Original strand, 18372485 - 18372561
Alignment:
Q  412 ttcctcatgtatacggtagtgattttcacctttgggcgtaccgct----tatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||| |||||||||| || | |||||||     |||||||| |||||||||||||||||||    
T  18372485 ttcctcatgtatacggtagtcattttcacctctgtgtgtaccgcgcgcatatatacgacaccttgtatttatctttt 18372561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 52374650 - 52374729
Alignment:
Q  400 ggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttat 479  Q
    |||||| |||||||| ||||||||||||||||||||||| ||||| |  ||| ||| | |||||| ||| ||||||||||    
T  52374650 ggtggtatgaggttcttcatgtatacggtagtgattttctcctttagatgtatcgcatctatacgacacattgtatttat 52374729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 570
Target Start/End: Original strand, 790314 - 790363
Alignment:
Q  521 catttttattttattacgagcttcttttcacctacagaaccgagcctcca 570  Q
    |||||||||||||||||||| |||||||||| |||||| || ||||||||    
T  790314 catttttattttattacgagtttcttttcacatacagagccaagcctcca 790363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 410 - 455
Target Start/End: Original strand, 48157143 - 48157188
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgc 455  Q
    |||||||||||||||| ||||| ||||||||||||||| |||||||    
T  48157143 ggttcctcatgtatacagtagtcattttcacctttgggtgtaccgc 48157188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 52973383 - 52973435
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttg 445  Q
    ||||||||||||||||| |||| ||||| |||| ||||||||||||| |||||    
T  52973383 ttgggagggtggtttgaagttcatcatgcatacagtagtgattttcatctttg 52973435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 525 - 587
Target Start/End: Complemental strand, 54574807 - 54574745
Alignment:
Q  525 tttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
    |||||||||||||| |  || |||||| | ||| |||||||||||||||||||||||| ||||    
T  54574807 tttattttattacgggtctcatttcacttccagcaccgagcctccagattcgtaggaacggcc 54574745  T

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Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 522 - 587
Target Start/End: Complemental strand, 36179544 - 36179479
Alignment:
Q  522 atttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
    ||||||||||||||||| || ||||||||| ||  | ||| ||||||| |||||||||||| ||||    
T  36179544 atttttattttattacgggcctcttttcacttatgggaccaagcctccggattcgtaggaacggcc 36179479  T

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Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 582
Target Start/End: Original strand, 49393207 - 49393267
Alignment:
Q  521 catttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    ||||||||||||||||||||  | ||||||| |||| | |||||||||| ||||||||||||    
T  49393207 catttttattttattacgagtcttttttcacttaca-agccgagcctccggattcgtaggaa 49393267  T

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Target: scaffold0097 (Bit Score: 59; Significance: 2e-24; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 398 - 484
Target Start/End: Original strand, 38914 - 39000
Alignment:
Q  398 agggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||| | ||| ||| |||||||| |||||||||||||||||||    
T  38914 agggtggtttgaggttcctcatatatacggtagtgattttcacatttgtgtgtatcgcatatatacgacaccttgtatttatctttt 39000  T

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Target: scaffold0097; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 523 - 582
Target Start/End: Original strand, 39045 - 39104
Alignment:
Q  523 tttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    ||||||||||||||||  | |||||| || ||||||| ||||||||||||||||||||||    
T  39045 tttttattttattacggacctctttttacttacagaatcgagcctccagattcgtaggaa 39104  T

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Target: scaffold1320 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 401 - 582
Target Start/End: Original strand, 1346 - 1530
Alignment:
Q  401 gtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatcttttnnnnnnnttaaataga 500  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||| |||  || ||||||| ||||||| ||||||||||||       |||||||||    
T  1346 gtggtttgaggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaataga 1445  T
Q  501 acattctccttt---nnnnnnnncatttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaa 582  Q
    ||||| | ||||           | ||||||||||||||||  ||||||||||| |||||| | |||||| ||||||||||||||    
T  1446 acattattcttttaaaaaaaatacgtttttattttattacggacttcttttcacttacagagcagagccttcagattcgtaggaa 1530  T

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Target: scaffold0039 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 106539 - 106613
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||||| ||||||||||||    
T  106539 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatctttt 106613  T

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Target: scaffold0007 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 387 - 484
Target Start/End: Complemental strand, 230984 - 230887
Alignment:
Q  387 ggtttgttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||  || ||| |||||||  ||||||  |||||||||||    
T  230984 ggttttttgggagggtggtttgaagttcctcatgtataaggtagtgattttcacctttgggtatatcgcatatatacaacaccttaaatttatctttt 230887  T

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Target: scaffold0022 (Bit Score: 52; Significance: 2e-20; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 40069 - 40160
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||| |||||||||||||| |||||||||||| | |||||||||||||| ||| ||||  | || |||||||||||||||||||||||||    
T  40069 ttgggacggtggtttgaggttgctcatgtatacgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatctttt 40160  T

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Target: scaffold0022; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 138129 - 138220
Alignment:
Q  393 ttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||| |||||||||||||| |||||||||||| | |||||||||||||| ||| ||||  | || |||||||||||||||||||||||||    
T  138129 ttgggacggtggtttgaggttgctcatgtatacgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatctttt 138220  T

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Target: scaffold0022; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 575
Target Start/End: Original strand, 40203 - 40257
Alignment:
Q  521 catttttattttattacgagcttcttttcacctacagaaccgagcctccagattc 575  Q
    ||||||||||||||||||| | ||||||||| |||||| | || |||||||||||    
T  40203 catttttattttattacgaacctcttttcacttacagagcagaacctccagattc 40257  T

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Target: scaffold0022; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 575
Target Start/End: Original strand, 138263 - 138317
Alignment:
Q  521 catttttattttattacgagcttcttttcacctacagaaccgagcctccagattc 575  Q
    ||||||||||||||||||| | ||||||||| |||||| | || |||||||||||    
T  138263 catttttattttattacgaacctcttttcacttacagagcagaacctccagattc 138317  T

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Target: scaffold0070 (Bit Score: 51; Significance: 9e-20; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 1344 - 1418
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||||||||||||| ||||||| || |||| ||||||| ||||||||||| ||||||||||||||||    
T  1344 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcagcttgtatttatctttt 1418  T

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Target: scaffold0004 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 336708 - 336792
Alignment:
Q  93 ccgtgataattgtgaagcttgaaattgtggagttagataaacgcattgtgggaggcaaattcaacacggtaacaaacacacgcta 177  Q
    |||||||| ||||||||||||||||||| |||||||| |||  ||| || ||||||||| |||||| ||||||||||||||||||    
T  336708 ccgtgatatttgtgaagcttgaaattgtagagttagaaaaaaccatggtcggaggcaaaatcaacatggtaacaaacacacgcta 336792  T

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Target: scaffold0227 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 398 - 477
Target Start/End: Original strand, 16016 - 16095
Alignment:
Q  398 agggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtattt 477  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||  ||||||| || ||||| || |||||||||    
T  16016 agggtggtttgaggtttctcatgtatacggtagtgattttcatctttggatgtaccgcatacatacgacatcttgtattt 16095  T

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Target: scaffold0003 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 484
Target Start/End: Complemental strand, 351445 - 351362
Alignment:
Q  401 gtggtttgaggttcctcatgtatacggtagtgattttcacctttgggcgtaccgcttatatacggcaccttgtatttatctttt 484  Q
    |||||||||||| |||| ||||| | |||| |||||||||||||||| ||||  | |||||||| |||||||||||||||||||    
T  351445 gtggtttgaggtacctcgtgtattcagtagcgattttcacctttgggtgtacaacatatatacgacaccttgtatttatctttt 351362  T

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Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 388 - 446
Target Start/End: Complemental strand, 350332 - 350274
Alignment:
Q  388 gtttgttgggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgg 446  Q
    |||| ||||||  |||||||||||| |||||||||| | |||| |||||||||||||||    
T  350332 gttttttgggattgtggtttgaggtacctcatgtattcagtagcgattttcacctttgg 350274  T

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Target: scaffold0003; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 587
Target Start/End: Complemental strand, 351323 - 351257
Alignment:
Q  521 catttttattttattacgagcttcttttcacctacagaaccgagcctccagattcgtaggaatggcc 587  Q
    |||||||||||||||||| || | ||||||| |||||| | ||||||||||||| || |||| ||||    
T  351323 catttttattttattacgggcattttttcacatacagagctgagcctccagatttgtcggaacggcc 351257  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 410 - 455
Target Start/End: Original strand, 181920 - 181965
Alignment:
Q  410 ggttcctcatgtatacggtagtgattttcacctttgggcgtaccgc 455  Q
    |||||||||||||||||||||| |||||||||| |||  |||||||    
T  181920 ggttcctcatgtatacggtagtcattttcacctctggatgtaccgc 181965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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