View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6386_high_12 (Length: 274)
Name: NF6386_high_12
Description: NF6386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6386_high_12 |
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Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 18 - 264
Target Start/End: Original strand, 4321118 - 4321364
Alignment:
| Q |
18 |
ataataagcatacatgtcctcaaaaacttctccaaactttctattatcaatcaacattgtccgtgataagagatgtaacttttaaagtcaagcttcaccg |
117 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |
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| T |
4321118 |
ataataagtatacatgtcctcaaaaacttctccaaactttctattatcaatcaacattgtctgtgataagagatgtaacttttaacgtcaagcttcaccg |
4321217 |
T |
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| Q |
118 |
tatctgattggtatataaatattggttcagaaaagaaaattaaattctggttcaactataagcatcttggtactttgacgatgccttctgacttttattc |
217 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
4321218 |
tatctgattggtatataaatattgattcagaaaagaaaattaaattctggttcaactataagcatcttagtactttgacgatgccttctgacttttattc |
4321317 |
T |
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| Q |
218 |
ttctctattcactatgacaagtcttgttttaaatgagacagtctgtg |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
4321318 |
ttctctattcactatgacaagtcttgttttaaatgagacaatctgtg |
4321364 |
T |
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