View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6390_high_8 (Length: 255)

Name: NF6390_high_8
Description: NF6390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6390_high_8
NF6390_high_8
[»] chr7 (24 HSPs)
chr7 (189-255)||(35923325-35923391)
chr7 (191-255)||(6191118-6191183)
chr7 (191-255)||(20123702-20123767)
chr7 (191-255)||(25944649-25944714)
chr7 (189-255)||(25737647-25737714)
chr7 (189-255)||(45486028-45486095)
chr7 (191-255)||(19912791-19912856)
chr7 (191-255)||(46760279-46760344)
chr7 (191-255)||(14805943-14806007)
chr7 (191-255)||(15252937-15253001)
chr7 (191-255)||(18102603-18102668)
chr7 (191-255)||(4910657-4910720)
chr7 (205-255)||(35068886-35068936)
chr7 (205-255)||(47779677-47779727)
chr7 (191-255)||(12632366-12632431)
chr7 (205-252)||(31549940-31549987)
chr7 (205-255)||(22632162-22632212)
chr7 (205-255)||(31768999-31769049)
chr7 (205-255)||(35888006-35888056)
chr7 (191-255)||(11780090-11780155)
chr7 (191-255)||(14574637-14574702)
chr7 (206-255)||(16917544-16917593)
chr7 (191-255)||(44682950-44683015)
chr7 (223-255)||(10248601-10248633)
[»] scaffold0774 (1 HSPs)
scaffold0774 (191-255)||(3451-3516)
[»] chr6 (14 HSPs)
chr6 (191-255)||(21542491-21542556)
chr6 (189-255)||(3095741-3095807)
chr6 (191-255)||(11082268-11082333)
chr6 (191-255)||(35129077-35129143)
chr6 (205-255)||(16524450-16524500)
chr6 (191-255)||(12461452-12461517)
chr6 (208-255)||(5822075-5822122)
chr6 (205-255)||(4032058-4032108)
chr6 (205-255)||(4988014-4988064)
chr6 (205-255)||(7274913-7274963)
chr6 (205-255)||(16013470-16013520)
chr6 (205-251)||(30794230-30794276)
chr6 (191-255)||(34177664-34177729)
chr6 (191-255)||(14573151-14573215)
[»] chr5 (27 HSPs)
chr5 (191-255)||(43589985-43590050)
chr5 (191-255)||(5984131-5984196)
chr5 (191-255)||(20644087-20644152)
chr5 (191-255)||(37522612-37522677)
chr5 (191-255)||(42273720-42273785)
chr5 (191-255)||(6686457-6686523)
chr5 (191-255)||(37562784-37562850)
chr5 (205-255)||(39505271-39505321)
chr5 (191-255)||(11261907-11261972)
chr5 (189-255)||(25840937-25841004)
chr5 (201-255)||(3463849-3463903)
chr5 (205-255)||(8959713-8959763)
chr5 (205-255)||(12912332-12912382)
chr5 (205-255)||(19413214-19413264)
chr5 (191-255)||(32111075-32111140)
chr5 (191-255)||(34425403-34425468)
chr5 (189-255)||(17351461-17351528)
chr5 (205-255)||(5369069-5369119)
chr5 (205-251)||(16153384-16153430)
chr5 (205-255)||(38130154-38130204)
chr5 (205-255)||(43454361-43454411)
chr5 (191-220)||(9957458-9957487)
chr5 (205-254)||(13146801-13146850)
chr5 (191-255)||(20039175-20039240)
chr5 (223-255)||(8506504-8506536)
chr5 (205-249)||(41625549-41625593)
chr5 (191-255)||(42104273-42104336)
[»] chr4 (33 HSPs)
chr4 (191-255)||(2229318-2229383)
chr4 (191-255)||(20281662-20281727)
chr4 (191-255)||(47867950-47868015)
chr4 (189-255)||(7654688-7654755)
chr4 (191-255)||(4058786-4058851)
chr4 (191-255)||(39078228-39078292)
chr4 (205-255)||(14332831-14332881)
chr4 (201-255)||(46070549-46070603)
chr4 (191-255)||(24940436-24940501)
chr4 (191-255)||(26916396-26916461)
chr4 (195-255)||(41414631-41414692)
chr4 (191-255)||(55580741-55580806)
chr4 (189-255)||(5483292-5483359)
chr4 (205-255)||(29511496-29511546)
chr4 (205-255)||(35310773-35310823)
chr4 (205-255)||(42915601-42915651)
chr4 (205-255)||(56318101-56318151)
chr4 (191-255)||(16604862-16604927)
chr4 (191-255)||(17794557-17794622)
chr4 (191-255)||(20716251-20716316)
chr4 (206-255)||(48793660-48793709)
chr4 (191-246)||(16473828-16473884)
chr4 (189-255)||(32323276-32323343)
chr4 (205-255)||(5064686-5064736)
chr4 (198-255)||(21722705-21722763)
chr4 (205-255)||(28142653-28142703)
chr4 (205-255)||(28669032-28669082)
chr4 (205-255)||(32410399-32410449)
chr4 (205-255)||(37911955-37912005)
chr4 (205-255)||(47516222-47516272)
chr4 (205-255)||(49080328-49080378)
chr4 (191-255)||(10069768-10069833)
chr4 (191-235)||(31280280-31280325)
[»] chr3 (43 HSPs)
chr3 (189-255)||(37042397-37042464)
chr3 (191-255)||(30189648-30189713)
chr3 (191-255)||(20847251-20847315)
chr3 (189-255)||(23311573-23311640)
chr3 (189-255)||(41476316-41476383)
chr3 (191-255)||(6438160-6438225)
chr3 (191-255)||(28875483-28875548)
chr3 (191-255)||(35963229-35963294)
chr3 (191-253)||(46711640-46711703)
chr3 (205-255)||(3972352-3972401)
chr3 (205-255)||(3997477-3997526)
chr3 (191-255)||(11054293-11054359)
chr3 (205-255)||(37075037-37075087)
chr3 (205-255)||(50651034-50651084)
chr3 (191-255)||(9264628-9264693)
chr3 (191-255)||(14752190-14752255)
chr3 (191-255)||(23910495-23910560)
chr3 (191-255)||(32619812-32619877)
chr3 (191-255)||(47864268-47864333)
chr3 (191-249)||(50730191-50730251)
chr3 (191-249)||(50782603-50782663)
chr3 (191-255)||(8703184-8703247)
chr3 (191-255)||(9055071-9055134)
chr3 (189-255)||(36546619-36546686)
chr3 (189-255)||(36561629-36561696)
chr3 (205-255)||(579135-579185)
chr3 (205-255)||(2927366-2927416)
chr3 (205-255)||(10114982-10115032)
chr3 (205-255)||(21214312-21214362)
chr3 (205-251)||(22479051-22479097)
chr3 (205-255)||(25242175-25242225)
chr3 (205-255)||(26724988-26725038)
chr3 (194-255)||(31836996-31837058)
chr3 (205-255)||(46557167-46557217)
chr3 (191-255)||(6075158-6075223)
chr3 (191-255)||(26208091-26208156)
chr3 (189-255)||(33973546-33973614)
chr3 (191-255)||(53270312-53270377)
chr3 (223-255)||(10014340-10014372)
chr3 (223-255)||(10252082-10252114)
chr3 (223-255)||(16033002-16033034)
chr3 (223-255)||(30454740-30454772)
chr3 (223-255)||(34194959-34194991)
[»] chr1 (37 HSPs)
chr1 (194-255)||(6785529-6785591)
chr1 (191-255)||(2126111-2126176)
chr1 (191-255)||(11241100-11241165)
chr1 (191-255)||(12448990-12449055)
chr1 (191-255)||(39555609-39555674)
chr1 (189-251)||(43765371-43765435)
chr1 (191-255)||(6786911-6786976)
chr1 (191-255)||(15959663-15959728)
chr1 (191-255)||(24190542-24190607)
chr1 (191-255)||(32624028-32624093)
chr1 (191-255)||(39932595-39932660)
chr1 (191-255)||(52985006-52985071)
chr1 (191-255)||(3875042-3875105)
chr1 (189-255)||(2246035-2246102)
chr1 (189-255)||(33369624-33369690)
chr1 (205-255)||(3861733-3861783)
chr1 (194-255)||(10558785-10558844)
chr1 (205-255)||(24728665-24728715)
chr1 (205-255)||(44148874-44148924)
chr1 (191-255)||(28016769-28016834)
chr1 (191-255)||(35691466-35691531)
chr1 (189-255)||(32983193-32983259)
chr1 (189-255)||(40718751-40718818)
chr1 (189-255)||(42965837-42965903)
chr1 (189-255)||(46543055-46543122)
chr1 (205-255)||(3076368-3076418)
chr1 (205-255)||(7397779-7397829)
chr1 (205-255)||(7468001-7468051)
chr1 (205-251)||(30221802-30221848)
chr1 (205-255)||(43667341-43667391)
chr1 (205-255)||(50176595-50176645)
chr1 (206-255)||(1034930-1034979)
chr1 (191-255)||(45226211-45226276)
chr1 (223-255)||(5950512-5950544)
chr1 (223-255)||(8889753-8889785)
chr1 (223-255)||(15912271-15912303)
chr1 (223-255)||(16688209-16688241)
[»] chr8 (24 HSPs)
chr8 (191-255)||(34890198-34890263)
chr8 (191-255)||(43216371-43216436)
chr8 (191-255)||(7858599-7858664)
chr8 (191-255)||(28348681-28348746)
chr8 (191-255)||(31734186-31734251)
chr8 (191-255)||(36190843-36190908)
chr8 (191-254)||(15824661-15824725)
chr8 (189-255)||(4480846-4480913)
chr8 (189-255)||(7022425-7022492)
chr8 (191-255)||(13143969-13144035)
chr8 (205-255)||(41362346-41362396)
chr8 (191-255)||(26483603-26483668)
chr8 (191-255)||(35456049-35456113)
chr8 (192-255)||(8711948-8712011)
chr8 (191-255)||(35525658-35525721)
chr8 (189-255)||(41086408-41086475)
chr8 (201-255)||(4038916-4038970)
chr8 (194-255)||(15957938-15958000)
chr8 (205-255)||(29920307-29920357)
chr8 (195-255)||(34158318-34158380)
chr8 (222-255)||(8712595-8712628)
chr8 (191-255)||(44663816-44663878)
chr8 (223-255)||(8745654-8745686)
chr8 (223-255)||(26954449-26954481)
[»] chr2 (33 HSPs)
chr2 (191-255)||(6110221-6110286)
chr2 (191-255)||(45660438-45660503)
chr2 (205-255)||(3201399-3201449)
chr2 (205-255)||(19264173-19264223)
chr2 (191-255)||(35115825-35115891)
chr2 (191-255)||(11617097-11617162)
chr2 (191-255)||(24204551-24204616)
chr2 (191-255)||(28599170-28599235)
chr2 (191-255)||(35517196-35517261)
chr2 (206-255)||(40584436-40584485)
chr2 (191-255)||(45085330-45085395)
chr2 (189-255)||(6765953-6766020)
chr2 (191-255)||(9864740-9864806)
chr2 (193-255)||(14874036-14874099)
chr2 (205-255)||(4891676-4891726)
chr2 (205-255)||(25572118-25572168)
chr2 (205-255)||(26998390-26998440)
chr2 (205-255)||(29524078-29524128)
chr2 (205-255)||(33198668-33198718)
chr2 (205-255)||(43415474-43415524)
chr2 (191-255)||(12938315-12938380)
chr2 (189-255)||(8701675-8701742)
chr2 (189-255)||(33677556-33677623)
chr2 (205-255)||(28858382-28858432)
chr2 (205-255)||(32010175-32010225)
chr2 (205-255)||(32273744-32273794)
chr2 (205-255)||(38071068-38071118)
chr2 (205-255)||(40808757-40808806)
chr2 (191-255)||(35022972-35023036)
chr2 (191-255)||(41528329-41528394)
chr2 (191-231)||(44455086-44455127)
chr2 (192-255)||(4707494-4707558)
chr2 (223-255)||(16494981-16495013)
[»] scaffold0132 (2 HSPs)
scaffold0132 (189-251)||(1089-1152)
scaffold0132 (189-251)||(9049-9112)
[»] scaffold0442 (1 HSPs)
scaffold0442 (205-255)||(10118-10168)
[»] scaffold0300 (1 HSPs)
scaffold0300 (191-255)||(596-661)
[»] scaffold0111 (1 HSPs)
scaffold0111 (197-255)||(40252-40311)
[»] scaffold0018 (1 HSPs)
scaffold0018 (200-255)||(154934-154989)
[»] scaffold0045 (1 HSPs)
scaffold0045 (191-255)||(78030-78095)
[»] scaffold0565 (1 HSPs)
scaffold0565 (205-255)||(5913-5963)
[»] scaffold0330 (1 HSPs)
scaffold0330 (205-255)||(3241-3291)
[»] scaffold0009 (1 HSPs)
scaffold0009 (205-255)||(157867-157917)
[»] scaffold0062 (1 HSPs)
scaffold0062 (191-255)||(44794-44859)


Alignment Details
Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 35923391 - 35923325
Alignment:
Q  189 aaaatttggagtatagtttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  35923391 aaaatttggagtatagtttttgtgttttctttggaaaaagttttatagaaagatgtaaaaacaattt 35923325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 6191183 - 6191118
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| |||||||||||| || ||||||||||| ||||||||||||||||||    
T  6191183 aatttggagtatagttttttgtgttttcttttaaaaaagttttataggaagatgtaaaaacaattt 6191118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 20123702 - 20123767
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| |||| |||||| ||| ||||||||||||||||||||||||||||||    
T  20123702 aatttggagtatagttttttgtgtattctttggaaaaagttttatagcaagatgtaaaaacaattt 20123767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 25944714 - 25944649
Alignment:
Q  191 aatttggagtata-gtttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  25944714 aatttggagtataagtttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattt 25944649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 25737647 - 25737714
Alignment:
Q  189 aaaatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||| |||||||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  25737647 aaaatttggggtatagttttgtgtgttttctttggaaaaagttttataggaagatgtaaaaacaattt 25737714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 45486095 - 45486028
Alignment:
Q  189 aaaatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||||||||| |||||||||||| |||||    
T  45486095 aaaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaataattt 45486028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 19912791 - 19912856
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||||| |||||||||||| ||| ||||||||||| || |||||||||||||||    
T  19912791 aatttggagtatagttttttgtgttttctttggaaaaagttttatagtaaaatgtaaaaacaattt 19912856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 46760279 - 46760344
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||||| ||||||||||||  || ||||||||||| ||||||||||||||||||    
T  46760279 aatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattt 46760344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 14806007 - 14805943
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| || |||||||| ||| ||||||||||| ||||||||||||||||||    
T  14806007 aatttggagtatagttttttgtattttcttt-gaaaaagttttataggaagatgtaaaaacaattt 14805943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 15253001 - 15252937
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| || |||||||| ||| ||||||||||| ||||||||||||||||||    
T  15253001 aatttggagtatagttttttgtattttcttt-gaaaaagttttataggaagatgtaaaaacaattt 15252937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 18102668 - 18102603
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||| ||||| |||||||||||  || ||||||||||| ||||||||||||||||||    
T  18102668 aatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattt 18102603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 4910657 - 4910720
Alignment:
Q  191 aatttggagtatagtttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||| |||||| |||||||||||||||| ||| ||||||||||| |||||||||||| |||||    
T  4910657 aatttgaagtata-tttttgtgttttctttagaaaaagttttataggaagatgtaaaaataattt 4910720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 35068886 - 35068936
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||  || ||||||||||| ||||||||||||||||||    
T  35068886 tttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattt 35068936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 47779727 - 47779677
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| |||||||||| || | ||||||||||||||||||    
T  47779727 tttttgtgttttctttagaataagtttcatgggaagatgtaaaaacaattt 47779677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 12632366 - 12632431
Alignment:
Q  191 aatttggagtatagtttttg-tgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||||||  ||||||||||  || |||||| |||| ||||||||||||||||||    
T  12632366 aatttggagtatagttttttatgttttctttgaaaaaagtttcataggaagatgtaaaaacaattt 12632431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 31549940 - 31549987
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaa 252  Q
    |||||| ||||||||| |||||| |||||||| |||||||||||||||    
T  31549940 tttttgcgttttctttagaataaattttataggaagatgtaaaaacaa 31549987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 22632212 - 22632162
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||  ||||||||| || | ||||||||||||||||||    
T  22632212 tttttgtgttttctttgaaataagtttcatgggaagatgtaaaaacaattt 22632162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 31768999 - 31769049
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||  |||||  |||||||||||||| ||||||||||||||||||    
T  31768999 tttttgtgtcatctttgaaataagttttataggaagatgtaaaaacaattt 31769049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 35888006 - 35888056
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  ||||| |||||||| ||||||||||||||||||    
T  35888006 tttttgtgttatctttgaaataacttttataggaagatgtaaaaacaattt 35888056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 11780155 - 11780090
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||| |||||||||| |||||||||||  ||||| |||||| | |||||||||||| |||||    
T  11780155 aatttggaatatagtttttcgtgttttctttaaaataaattttattggaagatgtaaaaataattt 11780090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 14574702 - 14574637
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| ||||||||||   ||||||||| || | |||||||||||| |||||    
T  14574702 aatttggagtatagttttttgtgttttcttgataataagtttcatgggaagatgtaaaaataattt 14574637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 16917593 - 16917544
Alignment:
Q  206 ttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||| |||||||| |||||||||| || | ||||||||||||||||||    
T  16917593 ttttgttttttctttggaataagtttcatgggaagatgtaaaaacaattt 16917544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 44683015 - 44682950
Alignment:
Q  191 aatttggagtatagt-ttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||| | ||||||||||| ||| |||||||||| ||   ||||||||||||||||||    
T  44683015 aatttggagtataatattttgtgttttttttggaataagtttgatgcgaagatgtaaaaacaattt 44682950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 10248633 - 10248601
Alignment:
Q  223 aataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| ||||||||||||||||||    
T  10248633 aataagttttatagaaagatgtaaaaacaattt 10248601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 3451 - 3516
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||| |||||    
T  3451 aatttggagtatagttttttgtgttttcttttgaaaaagttttataggaagatgtaaaaataattt 3516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 21542556 - 21542491
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  21542556 aatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattt 21542491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 3095741 - 3095807
Alignment:
Q  189 aaaatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  3095741 aaaatttggagtatagttttttgtgttttctttggaa-aagttttataggaagatgtaaaaacaattt 3095807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 11082268 - 11082333
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||||| |||||||||||| ||| |||||||||||  |||||||||||||||||    
T  11082268 aatttggagtatagttttttgtgttttctttggaaaaagttttatagggagatgtaaaaacaattt 11082333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 35129077 - 35129143
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaa-aaacaattt 255  Q
    |||||||||||||||||| |||||||||||| ||| ||||||||||| ||||||||| |||||||||    
T  35129077 aatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaataaacaattt 35129143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 16524500 - 16524450
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  |||||||||||||| ||||||||||||||||||    
T  16524500 tttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattt 16524450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 12461452 - 12461517
Alignment:
Q  191 aatttggagtatagtttttgtgttttcttttgaataagtttt-atagcaagatgtaaaaacaattt 255  Q
    |||||||| |||||||||| | ||||||||  |||||||||| |||| ||||||||||||||||||    
T  12461452 aatttggaatatagtttttttattttctttgaaataagtttttatagaaagatgtaaaaacaattt 12461517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 255
Target Start/End: Original strand, 5822075 - 5822122
Alignment:
Q  208 ttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||| ||||| |||||||||| |||| ||||||||||||||||||    
T  5822075 ttgtgttatctttggaataagtttcatagaaagatgtaaaaacaattt 5822122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 4032108 - 4032058
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  |||||||||||| | ||||||||||||||||||    
T  4032108 tttttgtgttatctttgaaataagttttatcggaagatgtaaaaacaattt 4032058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 4988064 - 4988014
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  |||||||||||||| |||||||||||| |||||    
T  4988064 tttttgtgttatctttgaaataagttttataggaagatgtaaaaataattt 4988014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 7274913 - 7274963
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||| |||||||| |||||||||| || | ||||||||||||||||||    
T  7274913 tttttgtattttctttggaataagtttcatgggaagatgtaaaaacaattt 7274963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 16013470 - 16013520
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||| || |||||  |||||||||||||| ||||||||||||||||||    
T  16013470 tttttgtattatctttgaaataagttttataggaagatgtaaaaacaattt 16013520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 251
Target Start/End: Original strand, 30794230 - 30794276
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaaca 251  Q
    ||||| |||||| ||| ||||||||||||||| ||||||||||||||    
T  30794230 tttttatgttttatttggaataagttttataggaagatgtaaaaaca 30794276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 34177664 - 34177729
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||| ||||||||| |||||||||||| ||| ||  |||||||  |||||||||||||||||    
T  34177664 aatttggaatatagttttttgtgttttctttggaaaaaaatttatagggagatgtaaaaacaattt 34177729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 14573151 - 14573215
Alignment:
Q  191 aatttggagtatagtttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||| ||||||| ||||||||  ||||||| |||| | | |||||||||| |||||    
T  14573151 aatttggagtataatttttgtattttctttgaaataagtattatgggatgatgtaaaaataattt 14573215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 43589985 - 43590050
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||  |||||||||||||||||    
T  43589985 aatttggagtatagttttttgtgttttcttttgaaaaagttttatagggagatgtaaaaacaattt 43590050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 5984131 - 5984196
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||| |||||||||||| |||||||||||| ||||||||||||||| || |||||||||||||||    
T  5984131 aatttagagtatagttttttgtgttttctttggaataagttttatagaaatatgtaaaaacaattt 5984196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 20644152 - 20644087
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||| ||||| ||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  20644152 aatttggagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattt 20644087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 37522612 - 37522677
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||||| |||||||| ||| ||| ||||||||||| ||||||||||||||||||    
T  37522612 aatttggagtatagttttttgtgttttttttggaaaaagttttataggaagatgtaaaaacaattt 37522677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 42273785 - 42273720
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||||  ||||||||||||||||||    
T  42273785 aatttggagtatagttttttgtgttttctttggaaaaagttttataagaagatgtaaaaacaattt 42273720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 6686523 - 6686457
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataa-gttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| ||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  6686523 aatttggagtatagttttttgtgttttctttggaaaaaagttttataggaagatgtaaaaacaattt 6686457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 37562784 - 37562850
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttg-aataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| ||||||| ||||| || ||||||||||| ||||||||||||||||||    
T  37562784 aatttggagtatagttttttgtgtttttttttggaaaaagttttataggaagatgtaaaaacaattt 37562850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 39505271 - 39505321
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| ||||||||||||| | ||||||||||||||||||    
T  39505271 tttttgtgttttctttggaataagttttatggtaagatgtaaaaacaattt 39505321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 11261907 - 11261972
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||| |||| ||||||||||||  || ||||||||||| ||||||||||||||||||    
T  11261907 aatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattt 11261972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 25841004 - 25840937
Alignment:
Q  189 aaaatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||| || ||||||||| ||||||||||| |||||||||| || | ||||||||||||||||||    
T  25841004 aaaatttgtagcatagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattt 25840937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 3463849 - 3463903
Alignment:
Q  201 atagtttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| |||||  |||||||||||||| ||||| ||||||||||||    
T  3463849 atagtttttgtgttatctttgaaataagttttataggaagatataaaaacaattt 3463903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 8959763 - 8959713
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  |||||||||||||| ||||||||||||||||||    
T  8959763 tttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattt 8959713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 12912332 - 12912382
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  |||||||||||||| ||||||||||||||||||    
T  12912332 tttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattt 12912382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 19413264 - 19413214
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||  |||||||||||| | ||||||||||||||||||    
T  19413264 tttttgtgttttctttgaaataagttttatgggaagatgtaaaaacaattt 19413214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 32111140 - 32111075
Alignment:
Q  191 aatttggagtatagt-ttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||| | |||||||||||||||  || |||||| |||| ||||||||||||||||||    
T  32111140 aatttggagtataatgttttgtgttttctttgaaaaaagtttcataggaagatgtaaaaacaattt 32111075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 34425468 - 34425403
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||| |||||||||||| |||||||||||  || ||||||||||| || |||||||||||||||    
T  34425468 aatttgaagtatagttttttgtgttttctttgaaaaaagttttataggaatatgtaaaaacaattt 34425403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 17351528 - 17351461
Alignment:
Q  189 aaaatttggagtatagtttttgtg-ttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||| |||||||||||||||| |  ||||| || ||||||||||||| | ||||||||||||||||||    
T  17351528 aaaacttggagtatagttttttttattttcgttggaataagttttatggaaagatgtaaaaacaattt 17351461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 5369069 - 5369119
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| | |||  |||||||||||||| ||||||||||||||||||    
T  5369069 tttttgtgttatttttaaaataagttttataggaagatgtaaaaacaattt 5369119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 251
Target Start/End: Original strand, 16153384 - 16153430
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaaca 251  Q
    |||||||||| |||||  |||||||||||||| ||||||||||||||    
T  16153384 tttttgtgttatctttgaaataagttttataggaagatgtaaaaaca 16153430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 38130154 - 38130204
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| ||| ||||||||||| || ||||||||| |||||    
T  38130154 tttttgtgttttctttagaaaaagttttataggaatatgtaaaaataattt 38130204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 43454361 - 43454411
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||   ||||||||||||| || |||||||||||||||    
T  43454361 tttttgtgttttctttgtcataagttttataggaatatgtaaaaacaattt 43454411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 220
Target Start/End: Original strand, 9957458 - 9957487
Alignment:
Q  191 aatttggagtatagtttttgtgttttcttt 220  Q
    ||||||||||||||||||||||||||||||    
T  9957458 aatttggagtatagtttttgtgttttcttt 9957487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 13146850 - 13146801
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaatt 254  Q
    |||||||||| ||||| ||||||||||||| | |||||||||||| ||||    
T  13146850 tttttgtgttctctttggaataagttttatggaaagatgtaaaaataatt 13146801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 20039240 - 20039175
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||| ||||| |||||||||||  || | ||||||||| ||||||||||| ||||||    
T  20039240 aatttggagtataattttttgtgttttctttgaaaaaggttttataggaagatgtaaaaccaattt 20039175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 8506536 - 8506504
Alignment:
Q  223 aataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| ||||||||||||||||||    
T  8506536 aataagttttatagaaagatgtaaaaacaattt 8506504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 41625549 - 41625593
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaa 249  Q
    ||||||||||||||||  ||||||||| |||| ||||||||||||    
T  41625549 tttttgtgttttctttgaaataagtttcataggaagatgtaaaaa 41625593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 42104273 - 42104336
Alignment:
Q  191 aatttggagtatagtttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||| |||| ||||| ||||| ||| |||||| || | ||||||||||||||||||    
T  42104273 aatttggagtataatttt-gtgttctctttggaacaagtttcatgggaagatgtaaaaacaattt 42104336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 2229383 - 2229318
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  2229383 aatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattt 2229318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 20281727 - 20281662
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  20281727 aatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattt 20281662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 47868015 - 47867950
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  47868015 aatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattt 47867950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 7654755 - 7654688
Alignment:
Q  189 aaaatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||||||||| ||||| ||||||||||||    
T  7654755 aaaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatataaaaacaattt 7654688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 4058851 - 4058786
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| |||||||||||  || ||||||||||| ||||||||||||||||||    
T  4058851 aatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattt 4058786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 39078292 - 39078228
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  39078292 aatttggagtatagttttttgtgttttctttggaaaaagttttatag-aagatgtaaaaacaattt 39078228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 14332881 - 14332831
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  14332881 tttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattt 14332831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 46070549 - 46070603
Alignment:
Q  201 atagtttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| |||||  |||||||||||||| ||||||||||||||||||    
T  46070549 atagtttttgtgttgtctttgaaataagttttataggaagatgtaaaaacaattt 46070603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 24940501 - 24940436
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| || |||||||| ||| ||||||||||  ||||||||||||||||||    
T  24940501 aatttggagtatagttttttgtattttctttggaaaaagttttataagaagatgtaaaaacaattt 24940436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 26916461 - 26916396
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||| |||||| |||||||||||  || ||||||||||| ||||||||||||||||||    
T  26916461 aatttggagtatggttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattt 26916396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 41414631 - 41414692
Alignment:
Q  195 tggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| ||||||||||||  || ||||||||||| ||||||||||||||||||    
T  41414631 tggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattt 41414692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 55580806 - 55580741
Alignment:
Q  191 aatttggagtatagtttttgt-gttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| | ||||||||| ||| ||||| ||||| ||||||||||||||||||    
T  55580806 aatttggagtatagttttttttgttttctttggaaaaagttgtataggaagatgtaaaaacaattt 55580741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 5483292 - 5483359
Alignment:
Q  189 aaaatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||| |||||| |||| ||||||||||||  ||||||||| |||| ||||||||||||||||||    
T  5483292 aaaatttgaagtataattttttgtgttttctttaaaataagtttaataggaagatgtaaaaacaattt 5483359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 29511546 - 29511496
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  |||||||||||||| ||||||||||||||||||    
T  29511546 tttttgtgttatctttaaaataagttttataggaagatgtaaaaacaattt 29511496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 35310773 - 35310823
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| |||||||||| || | ||||||||||||||||||    
T  35310773 tttttgtgttttctttagaataagtttcatggaaagatgtaaaaacaattt 35310823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 42915651 - 42915601
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| |||||||||| || | ||||||||||||||||||    
T  42915651 tttttgtgttttctttggaataagtttcatggaaagatgtaaaaacaattt 42915601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 56318101 - 56318151
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| ||| ||| ||||||| ||||||||||||||||||    
T  56318101 tttttgtgttttctttggaaaaaggtttataggaagatgtaaaaacaattt 56318151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 16604862 - 16604927
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||| |||||||||||| ||||||||||||  || ||||||||||| ||||||| ||||||||||    
T  16604862 aatttagagtatagttttttgtgttttctttgaaaaaagttttataggaagatgttaaaacaattt 16604927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 17794557 - 17794622
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||| |||||||||||| | |||||||||  ||||| |||||||| ||||||||||||||||||    
T  17794557 aatttgaagtatagttttttgcgttttctttgaaataaattttataggaagatgtaaaaacaattt 17794622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 20716316 - 20716251
Alignment:
Q  191 aatttggagtatagt-ttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||| |||||  |||| ||| ||| ||||||||||| ||||||||||||||||||    
T  20716316 aatttggagtatagtcttttgacttttgtttggaaaaagttttatagaaagatgtaaaaacaattt 20716251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 48793660 - 48793709
Alignment:
Q  206 ttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||| |||||||||| || | ||||||||||||||||||    
T  48793660 ttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattt 48793709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 16473884 - 16473828
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaa 246  Q
    ||||||||||||||||||| |||||||||||  || ||||||||||| |||||||||    
T  16473884 aatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaa 16473828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 32323276 - 32323343
Alignment:
Q  189 aaaatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||| ||||| ||||| ||||||||||||  |||||| ||||| | ||||||||||||||||||    
T  32323276 aaaatttgaagtattgttttttgtgttttctttaaaataagatttatgggaagatgtaaaaacaattt 32323343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 5064686 - 5064736
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  ||||||||||| || ||||||||||||||||||    
T  5064686 tttttgtgttatctttgaaataagttttaaaggaagatgtaaaaacaattt 5064736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 21722705 - 21722763
Alignment:
Q  198 agtatagt-ttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||| |||| ||||||||||  |||||||||||||| |||||||||||| |||||    
T  21722705 agtatagtgttttatgttttctttgtaataagttttataggaagatgtaaaaataattt 21722763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 28142653 - 28142703
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  |||||||||||||| | ||||||||||||||||    
T  28142653 tttttgtgttatctttaaaataagttttataggaggatgtaaaaacaattt 28142703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 28669032 - 28669082
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| ||| | ||||||||| || |||||||||||||||    
T  28669032 tttttgtgttttctttagaaaaggttttataggaaaatgtaaaaacaattt 28669082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 32410449 - 32410399
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  |||||||||||||| |||||||||||| |||||    
T  32410449 tttttgtgttatctttgaaataagttttataggaagatgtaaaaataattt 32410399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 37912005 - 37911955
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  |||||||||||||| || |||||||||||||||    
T  37912005 tttttgtgttatctttaaaataagttttatagaaatatgtaaaaacaattt 37911955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 47516222 - 47516272
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  |||||||||||||| |||| |||||||||||||    
T  47516222 tttttgtgttatctttgaaataagttttataggaagaagtaaaaacaattt 47516272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 49080378 - 49080328
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||| || |||||  |||||||||||||| ||||||||||||||||||    
T  49080378 tttttgtcttatctttgaaataagttttataggaagatgtaaaaacaattt 49080328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 10069833 - 10069768
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||| |||||||||||| || |||||||   || ||||||||||| ||||||||||||||||||    
T  10069833 aatttgtagtatagttttttgtattttcttcgaaaaaagttttatagaaagatgtaaaaacaattt 10069768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 31280325 - 31280280
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttata 235  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  31280325 aatttagagtatagttttttgtgttttctttggaataagttttata 31280280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 37042397 - 37042464
Alignment:
Q  189 aaaatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||||||| ||||||||| || ||| ||||||||||| ||||||||||||||||||    
T  37042397 aaaatttggagtatagttttttgtgttttcgttggaaaaagttttataggaagatgtaaaaacaattt 37042464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 30189713 - 30189648
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| |||||||||||  || ||||||||||| ||||||||||||||||||    
T  30189713 aatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattt 30189648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 20847251 - 20847315
Alignment:
Q  191 aatttggagtatagtttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||| |||||||||||||||| |||||||||| |||| |||||||  |||||||||    
T  20847251 aatttggagtataatttttgtgttttctttggaataagtttcataggaagatgtgcaaacaattt 20847315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 23311573 - 23311640
Alignment:
Q  189 aaaatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||| |||||||||||| ||||||||||||  || ||||||||||| ||||||||||||||||||    
T  23311573 aaaatttagagtatagttttgtgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattt 23311640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 41476316 - 41476383
Alignment:
Q  189 aaaatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||||||| ||||||||||||  || ||||||||||| |||||||||||| |||||    
T  41476316 aaaatttggagtatagttttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaataattt 41476383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 6438225 - 6438160
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| |||||||||||  || ||| ||||||| ||||||||||||||||||    
T  6438225 aatttggagtatagttttttgtgttttctttgaaaaaagctttataggaagatgtaaaaacaattt 6438160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 28875548 - 28875483
Alignment:
Q  191 aatttggagtatagtt-tttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||| ||||||| |||||||||||||| ||| ||||||||||  ||||||||||||||||||    
T  28875548 aatttggactatagttatttgtgttttctttggaaaaagttttataagaagatgtaaaaacaattt 28875483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 35963294 - 35963229
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| ||||||| ||| ||| ||||||||||| |||||| |||||||||||    
T  35963294 aatttggagtatagttttttgtgttttgtttggaaaaagttttataggaagatggaaaaacaattt 35963229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 46711640 - 46711703
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaat 253  Q
    ||||||||||||| |||| ||||||||||||  || ||||||||||| ||||||||||||||||    
T  46711640 aatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaat 46711703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 3972401 - 3972352
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| ||||||||||||| | ||||||||||||||||||    
T  3972401 tttttgtgttttcttt-gaataagttttatgggaagatgtaaaaacaattt 3972352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 3997477 - 3997526
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| ||||||||||||| | ||||||||||||||||||    
T  3997477 tttttgtgttttcttt-gaataagttttatgggaagatgtaaaaacaattt 3997526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 11054293 - 11054359
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataa-gttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| ||||||||||| ||| || ||||||||| ||||| ||||||||||||    
T  11054293 aatttggagtatagttttttgtgttttctttggaaaaaagttttataggaagatttaaaaacaattt 11054359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 37075087 - 37075037
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| ||| ||||||||||| |||||||||| |||||||    
T  37075087 tttttgtgttttctttggaaaaagttttataggaagatgtaaacacaattt 37075037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 50651034 - 50651084
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||  || ||||||||||| ||||||||||||||||||    
T  50651034 tttttgtgttttctttgcaaaaagttttataggaagatgtaaaaacaattt 50651084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 9264693 - 9264628
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||| ||||||||||||| |||||||||||  || ||||||||||  ||||||||||||||||||    
T  9264693 aattttgagtatagttttttgtgttttctttgaaaaaagttttatatgaagatgtaaaaacaattt 9264628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 14752190 - 14752255
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||| |||| |||||||||||| ||| ||  ||||||| ||||||||||||||||||    
T  14752190 aatttggagtataattttttgtgttttctttggaaaaaaatttataggaagatgtaaaaacaattt 14752255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 23910495 - 23910560
Alignment:
Q  191 aatttggagtatag-tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||| |||||||| ||||||||||||||||  || ||||||||||| |||||||||||| |||||    
T  23910495 aatttagagtatagctttttgtgttttctttgtaaaaagttttataggaagatgtaaaaataattt 23910560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 32619812 - 32619877
Alignment:
Q  191 aatttggagtatagt-ttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||| | ||||||||||||||| ||||| ||||||||  |||||||||||| |||||    
T  32619812 aatttggagtataatattttgtgttttctttggaataggttttataagaagatgtaaaaataattt 32619877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 47864333 - 47864268
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| |  ||||||||  || ||||||||||| ||||||||||||||||||    
T  47864333 aatttggagtatagttttttgcattttctttgaaaaaagttttataggaagatgtaaaaacaattt 47864268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 50730251 - 50730191
Alignment:
Q  191 aatttggagtatagtttttgtgt--tttcttttgaataagttttatagcaagatgtaaaaa 249  Q
    ||||||||||||||||||| |||  ||||||| ||| ||||||||||| ||||||||||||    
T  50730251 aatttggagtatagtttttttgtgctttctttggaaaaagttttataggaagatgtaaaaa 50730191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 50782603 - 50782663
Alignment:
Q  191 aatttggagtatagtttttgtgt--tttcttttgaataagttttatagcaagatgtaaaaa 249  Q
    ||||||||||||||||||| |||  ||||||| ||| ||||||||||| ||||||||||||    
T  50782603 aatttggagtatagtttttttgtgctttctttggaaaaagttttataggaagatgtaaaaa 50782663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 8703247 - 8703184
Alignment:
Q  191 aatttggagtatagtttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||||||| || ||| ||| ||  ||||||| ||||||||||||||||||    
T  8703247 aatttggagtatagtttttgtgtgtt-tttggaaaaaaatttataggaagatgtaaaaacaattt 8703184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 9055134 - 9055071
Alignment:
Q  191 aatttggagtatagtttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||||||| || ||| ||| ||  ||||||| ||||||||||||||||||    
T  9055134 aatttggagtatagtttttgtgtgtt-tttggaaaaaaatttataggaagatgtaaaaacaattt 9055071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 36546686 - 36546619
Alignment:
Q  189 aaaatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||| ||||||||||||| || |||||||| ||| |||||| |||| ||||||||||| ||||||    
T  36546686 aaaatttagagtatagttttttgtattttctttggaaaaagtttcataggaagatgtaaaaccaattt 36546619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 36561629 - 36561696
Alignment:
Q  189 aaaatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||| ||||||||||||| || |||||||| ||| |||||| |||| ||||||||||| ||||||    
T  36561629 aaaatttagagtatagttttttgtattttctttggaaaaagtttcataggaagatgtaaaaccaattt 36561696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 579135 - 579185
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||  || ||||||||||| ||||| ||||||||||||    
T  579135 tttttgtgttttctttgaaaaaagttttataggaagatataaaaacaattt 579185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 2927416 - 2927366
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||| |||||||| ||||||||||||| | |||||||||||| |||||    
T  2927416 tttttgtattttctttggaataagttttatgggaagatgtaaaaataattt 2927366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 10115032 - 10114982
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||| || |||||  |||||||||||||| ||||||||||||||||||    
T  10115032 tttttgtattatctttgaaataagttttataggaagatgtaaaaacaattt 10114982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 21214362 - 21214312
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| | |||  |||||||||||||| ||||||||||||||||||    
T  21214362 tttttgtgttatttttgaaataagttttatagaaagatgtaaaaacaattt 21214312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 251
Target Start/End: Original strand, 22479051 - 22479097
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaaca 251  Q
    |||||||||| |||||  |||||||||||||| ||||||||||||||    
T  22479051 tttttgtgttatctttgaaataagttttataggaagatgtaaaaaca 22479097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 25242175 - 25242225
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  |||||||||||||| |||||| |||||||||||    
T  25242175 tttttgtgttatctttaaaataagttttatagaaagatgaaaaaacaattt 25242225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 26724988 - 26725038
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| ||||||||||| |   ||||||||||||||||||    
T  26724988 tttttgtgttttctttggaataagttttctgagaagatgtaaaaacaattt 26725038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 31837058 - 31836996
Alignment:
Q  194 ttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| || |||||||| ||| ||||||||||| || ||| |||||||||||    
T  31837058 ttggagtatagttttttgtattttctttggaaaaagttttataggaatatgcaaaaacaattt 31836996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 46557167 - 46557217
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| |||||||||| || | |||||||||||| |||||    
T  46557167 tttttgtgttttctttagaataagtttcatgggaagatgtaaaaataattt 46557217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 6075223 - 6075158
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||| ||||| ||||||||||| ||| |||| ||| || |||| |||||||||||||    
T  6075223 aatttggagtataattttttgtgttttctttggaaaaagtgttacaggaagaagtaaaaacaattt 6075158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 26208156 - 26208091
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||| ||||||||||||| ||||||| | | |||||||||| || | ||||||||||||||||||    
T  26208156 aatttagagtatagttttttgtgttttgtctggaataagtttcatggtaagatgtaaaaacaattt 26208091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 33973546 - 33973614
Alignment:
Q  189 aaaatttggagtatagtttt--tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||||  ||||||||||||  || ||||||||||| |||| || |||| |||||    
T  33973546 aaaatttggagtatagtttttttgtgttttctttaaaaaaagttttatagaaagacgtcaaaataattt 33973614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 53270377 - 53270312
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| |||||||||||  || |||||| |||| |||||| ||||| |||||    
T  53270377 aatttggagtatagttttttgtgttttctttgaaaaaagtttcatagaaagatgaaaaaataattt 53270312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 10014372 - 10014340
Alignment:
Q  223 aataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| ||||||||||||||||||    
T  10014372 aataagttttataggaagatgtaaaaacaattt 10014340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 10252114 - 10252082
Alignment:
Q  223 aataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| ||||||||||||||||||    
T  10252114 aataagttttataggaagatgtaaaaacaattt 10252082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 16033002 - 16033034
Alignment:
Q  223 aataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| ||||||||||||||||||    
T  16033002 aataagttttataggaagatgtaaaaacaattt 16033034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 30454740 - 30454772
Alignment:
Q  223 aataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| ||||||||||||||||||    
T  30454740 aataagttttatagaaagatgtaaaaacaattt 30454772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 34194991 - 34194959
Alignment:
Q  223 aataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| ||||||||||||||||||    
T  34194991 aataagttttataggaagatgtaaaaacaattt 34194959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 6785591 - 6785529
Alignment:
Q  194 ttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| ||||||||||||||| ||||||||||  ||||||||||||||||||    
T  6785591 ttggagtatagttttttgtgttttcttttgaaaaagttttatatgaagatgtaaaaacaattt 6785529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 2126176 - 2126111
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||| |||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  2126176 aatttggaatatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattt 2126111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 11241165 - 11241100
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||||| ||||||||||| ||||||    
T  11241165 aatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaccaattt 11241100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 12448990 - 12449055
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||||| ||||||||||||  || ||||||||||| ||||||||||||||||||    
T  12448990 aatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattt 12449055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 39555609 - 39555674
Alignment:
Q  191 aatttggagtatag-tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| ||||||||||||||||  || ||||||||||| ||||||||||||||||||    
T  39555609 aatttggagtataggtttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaacaattt 39555674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 43765435 - 43765371
Alignment:
Q  189 aaaatttggagtatagttttt--gtgttttcttttgaataagttttatagcaagatgtaaaaaca 251  Q
    |||||||| ||||||||||||  ||||||||||| ||||||||||||||| ||||||||||||||    
T  43765435 aaaatttgtagtatagtttttttgtgttttctttagaataagttttataggaagatgtaaaaaca 43765371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 6786976 - 6786911
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||||  |||||||||| |||||||    
T  6786976 aatttggagtatagttttttgtgttttctttggaaaaagttttatatgaagatgtaaacacaattt 6786911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 15959663 - 15959728
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||| |||| ||||||||||||  || ||||||||||| ||||||||||||||||||    
T  15959663 aatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattt 15959728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 24190607 - 24190542
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||||   |||||||||||||||||    
T  24190607 aatttggagtatagttttttgtgttttctttggaaaaagttttatacggagatgtaaaaacaattt 24190542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 32624028 - 32624093
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| ||||||| ||||||||||||  || ||||||||||| ||||||||||||||||||    
T  32624028 aatttggagtgtagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattt 32624093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 39932595 - 39932660
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||||| |||||||| |||| |||||||||||||  ||||| ||||||||||||    
T  39932595 aatttggagtatagttttttgtgttttttttttaataagttttataagaagatataaaaacaattt 39932660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 52985071 - 52985006
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| ||||||||||| |||||||||| |  | ||||||||||||||||||    
T  52985071 aatttggagtatagttttttgtgttttctttggaataagtttcacgggaagatgtaaaaacaattt 52985006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 3875042 - 3875105
Alignment:
Q  191 aatttggagtatagtttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||| ||||||||||| ||||||| ||||||| ||||||||||| || |||||||||||||||    
T  3875042 aatttgaagtatagtttt-gtgtttttttttgaaaaagttttataggaatatgtaaaaacaattt 3875105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 2246035 - 2246102
Alignment:
Q  189 aaaatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||| |||||||||||| ||||||||||||  |||||||||||||| || ||||||||| |||||    
T  2246035 aaaatttagagtatagttttttgtgttttctttgaaataagttttataggaatatgtaaaaagaattt 2246102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 33369690 - 33369624
Alignment:
Q  189 aaaatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||||||||   |||||||||||||||||    
T  33369690 aaaatttggagtatagttttttgtgttttctttggaaaaagttttata-tgagatgtaaaaacaattt 33369624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 3861733 - 3861783
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||| |||||||||| ||||||||||||| | ||||||||||||||||||    
T  3861733 tttttatgttttctttagaataagttttattgaaagatgtaaaaacaattt 3861783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 10558785 - 10558844
Alignment:
Q  194 ttggagtatagtttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||  ||||||||||| |||||| |||||| | ||||||||||||||||||    
T  10558785 ttggagtatagttt--gtgttttctttggaataatttttatgggaagatgtaaaaacaattt 10558844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 24728665 - 24728715
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| |||||||||| || | ||||||||||||||||||    
T  24728665 tttttgtgttttctttcgaataagtttcatgggaagatgtaaaaacaattt 24728715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 44148874 - 44148924
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| |||||||||| || | ||||||||||||||||||    
T  44148874 tttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattt 44148924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 28016769 - 28016834
Alignment:
Q  191 aatttggagtatagtttttg-tgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||| |||||||||||||| ||||||||||  || | ||||||||| ||||||||||||||||||    
T  28016769 aatttagagtatagtttttggtgttttctttgaaaaatgttttataggaagatgtaaaaacaattt 28016834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 35691531 - 35691466
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||| ||||| |||||||||||  || |||||||||||  |||||||||||||||||    
T  35691531 aatttggagtataattttttgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattt 35691466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 32983193 - 32983259
Alignment:
Q  189 aaaatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||| | |||||||||||| ||||||||||| ||| ||||||||||  ||||||||||||||||||    
T  32983193 aaaattggaagtatagttttttgtgttttctttggaa-aagttttataagaagatgtaaaaacaattt 32983259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 40718818 - 40718751
Alignment:
Q  189 aaaatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||||| |||||||||||  || ||||||||||  ||| |||| |||||||||    
T  40718818 aaaatttggagtatagttttttgtgttttctttgaaaaaagttttatatgaagttgtagaaacaattt 40718751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 42965837 - 42965903
Alignment:
Q  189 aaaatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||| ||| |||||||| ||||||||||| ||| || |||||||| ||||||||||||||||||    
T  42965837 aaaatttgaagtttagttttttgtgttttctttggaaaaa-ttttataggaagatgtaaaaacaattt 42965903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 46543122 - 46543055
Alignment:
Q  189 aaaatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||||| |||||||||||  || ||  ||||||| |||||| |||||||||||    
T  46543122 aaaatttggagtatagttttttgtgttttctttgaaaaaaaatttataggaagatgaaaaaacaattt 46543055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 3076418 - 3076368
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||| ||| ||||||||||||| | |||||||||||| |||||    
T  3076418 tttttgtgttttatttggaataagttttatgggaagatgtaaaaataattt 3076368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 7397829 - 7397779
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  ||||| |||||||| ||||||||||||||||||    
T  7397829 tttttgtgttatctttgaaataaattttataggaagatgtaaaaacaattt 7397779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 7468001 - 7468051
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| ||| |||||||| || |||||||||| |||||||    
T  7468001 tttttgtgttttctttggaaaaagttttaaaggaagatgtaaatacaattt 7468051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 30221848 - 30221802
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaaca 251  Q
    ||||||||||||||||  |||||||||||| | ||||||||||||||    
T  30221848 tttttgtgttttctttaaaataagttttatgggaagatgtaaaaaca 30221802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 43667341 - 43667391
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||  || ||||||||||| |||| |||||||||||||    
T  43667341 tttttgtgttttctttgaaaaaagttttataggaagacgtaaaaacaattt 43667391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 50176645 - 50176595
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  ||||| |||||||| ||||||||||||||||||    
T  50176645 tttttgtgttatctttgaaataaattttataggaagatgtaaaaacaattt 50176595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 1034979 - 1034930
Alignment:
Q  206 ttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||| |||||||||||||   ||||| ||||||||||||    
T  1034979 ttttgtgttttctttggaataagttttatgagaagatataaaaacaattt 1034930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 45226276 - 45226211
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||| |||||||||||| ||| ||||||||  || ||||||||||| |||| |||||||||||||    
T  45226276 aatttagagtatagttttatgtattttctttgaaaaaagttttataggaagacgtaaaaacaattt 45226211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 5950544 - 5950512
Alignment:
Q  223 aataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| ||||||||||||||||||    
T  5950544 aataagttttataggaagatgtaaaaacaattt 5950512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 8889753 - 8889785
Alignment:
Q  223 aataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| ||||||||||||||||||    
T  8889753 aataagttttataggaagatgtaaaaacaattt 8889785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 15912303 - 15912271
Alignment:
Q  223 aataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| ||||||||||||||||||    
T  15912303 aataagttttataggaagatgtaaaaacaattt 15912271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 16688241 - 16688209
Alignment:
Q  223 aataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| ||||||||||||||||||    
T  16688241 aataagttttataggaagatgtaaaaacaattt 16688209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 34890198 - 34890263
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||| |||| |||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  34890198 aatttggagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattt 34890263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 43216371 - 43216436
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||||| ||||||||||||  || ||||||||||| ||||||||||||||||||    
T  43216371 aatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattt 43216436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 7858664 - 7858599
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| ||||||| |||  || ||||||||||| ||||||||||||||||||    
T  7858664 aatttggagtatagttttttgtgttttatttgaaaaaagttttataggaagatgtaaaaacaattt 7858599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 28348746 - 28348681
Alignment:
Q  191 aatttggagtatagt-ttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||| |||||| |||||||| ||| ||||||||||| || |||||||||||||||    
T  28348746 aatttggagtatagtattttgtattttctttggaaaaagttttataggaatatgtaaaaacaattt 28348681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 31734251 - 31734186
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| |||||||||||  || ||||||||||| ||||| ||||||||||||    
T  31734251 aatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatataaaaacaattt 31734186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 36190908 - 36190843
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||| ||||||||||||| |||||||||||  || ||||||||||| ||||||||||||||||||    
T  36190908 aatttagagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattt 36190843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 15824661 - 15824725
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaatt 254  Q
    |||||| ||||||||||| |||||||||||| |||||||||| || | |||||||||||||||||    
T  15824661 aatttgaagtatagttttttgtgttttctttagaataagtttcatggaaagatgtaaaaacaatt 15824725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 4480913 - 4480846
Alignment:
Q  189 aaaatttggagtatag-tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| |||||||||| |||||  |||||||||||| | |||||||||||| |||||    
T  4480913 aaaatttggagtataggtttttgtgttatctttaaaataagttttattggaagatgtaaaaataattt 4480846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 7022425 - 7022492
Alignment:
Q  189 aaaatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||||||| ||||||||||||  || ||||||||||| ||||| |||||| |||||    
T  7022425 aaaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatataaaaataattt 7022492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 13143969 - 13144035
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataa-gttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| |||||||||||  || || ||||||||| ||||||||||||||||||    
T  13143969 aatttggagtatagttttttgtgttttctttgaaaaaaagttttataggaagatgtaaaaacaattt 13144035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 41362346 - 41362396
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  |||||||||||||| ||||||||||||||||||    
T  41362346 tttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattt 41362396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 26483668 - 26483603
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||| |||||||||||| |||||||||||  || |||||||||||  |||||||||||||||||    
T  26483668 aatttgaagtatagttttttgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattt 26483603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 35456049 - 35456113
Alignment:
Q  191 aatttggagtatagtttttg-tgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||| ||||||||||||  |||||| ||||||| ||||||||||| ||||||||||||||||||    
T  35456049 aatttgaagtatagttttttatgtttt-ttttgaaaaagttttatagaaagatgtaaaaacaattt 35456113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 255
Target Start/End: Complemental strand, 8712011 - 8711948
Alignment:
Q  192 atttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||||| ||||||| ||| ||| ||||||||||| |||||||||||| |||||    
T  8712011 atttggagtatagttttttgtgtttt-tttggaaaaagttttataggaagatgtaaaaataattt 8711948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 35525721 - 35525658
Alignment:
Q  191 aatttggagtatagtttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||| |||||||||||| |||||||||||  || |||||||| || ||||||||||||||||||    
T  35525721 aatttagagtatagtttt-gtgttttctttgaaaaaagttttacaggaagatgtaaaaacaattt 35525658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 41086408 - 41086475
Alignment:
Q  189 aaaatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||| | ||||||||| ||||||||||||  || ||||||||||  ||||||||||||||||||    
T  41086408 aaaatttgaattatagttttttgtgttttctttgaaaaaagttttatataaagatgtaaaaacaattt 41086475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 4038916 - 4038970
Alignment:
Q  201 atagtttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| | |||  |||||||||||||  ||||||||||||||||||    
T  4038916 atagtttttgtgttatttttgaaataagttttatatgaagatgtaaaaacaattt 4038970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 15957938 - 15958000
Alignment:
Q  194 ttggagtatagttt-ttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| |||||||||||||  || ||||||||||| || | |||||||||||||    
T  15957938 ttggagtatagtttattgtgttttctttgaaaaaagttttataggaataagtaaaaacaattt 15958000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 29920307 - 29920357
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| ||||| |||||||||| || | ||||||||||||||||||    
T  29920307 tttttgtgttatctttggaataagtttcatgggaagatgtaaaaacaattt 29920357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 34158318 - 34158380
Alignment:
Q  195 tggagtatagttt-ttgtgttttcttttgaataa-gttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||| |||||||||||||  || || ||||||||| ||||||||||||||||||    
T  34158318 tggagtatagtttgttgtgttttctttaaaaaaaagttttataggaagatgtaaaaacaattt 34158380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 255
Target Start/End: Complemental strand, 8712628 - 8712595
Alignment:
Q  222 gaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||| ||||||||||||||||||    
T  8712628 gaataagttttatagaaagatgtaaaaacaattt 8712595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 44663816 - 44663878
Alignment:
Q  191 aatttggagtatagtttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||| |||||||||||  ||||||||||| |||||| |||||| | |||||||||||| |||||    
T  44663816 aatttagagtatagttt--gtgttttctttggaataaattttatggaaagatgtaaaaataattt 44663878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 8745686 - 8745654
Alignment:
Q  223 aataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| ||||||||||||||||||    
T  8745686 aataagttttataggaagatgtaaaaacaattt 8745654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 26954449 - 26954481
Alignment:
Q  223 aataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| ||||||||||||||||||    
T  26954449 aataagttttataggaagatgtaaaaacaattt 26954481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 6110221 - 6110286
Alignment:
Q  191 aatttggagtatag-tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| |||||||||||||||  ||| ||||||||||| ||||||||||||||||||    
T  6110221 aatttggagtatagctttttgtgttttcttcggaaaaagttttataggaagatgtaaaaacaattt 6110286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 45660503 - 45660438
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| |||||||||||  || ||||||||||| ||||||||||||||||||    
T  45660503 aatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattt 45660438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 3201449 - 3201399
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  3201449 tttttgtgttttctttggaaaaagttttatagaaagatgtaaaaacaattt 3201399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 19264223 - 19264173
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  19264223 tttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattt 19264173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 35115825 - 35115891
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttg-aataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| ||||||| ||||  |||||||||||||| ||||||||||||||||||    
T  35115825 aatttggagtatagttttttgtgtttttttttttaataagttttatagaaagatgtaaaaacaattt 35115891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 11617162 - 11617097
Alignment:
Q  191 aatttggagtatagtttttg-tgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||||||| | ||||||||  || ||||||||||| ||||||||||||||||||    
T  11617162 aatttggagtatagtttttggtattttctttgaaaaaagttttataggaagatgtaaaaacaattt 11617097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 24204551 - 24204616
Alignment:
Q  191 aatttggagtatagttt-ttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||| ||| ||||||||||||| ||||||||||||||| || |||||||| ||||||    
T  24204551 aatttggagtataatttattgtgttttctttggaataagttttataggaatatgtaaaatcaattt 24204616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 28599170 - 28599235
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||||| |||||||||||| ||| ||| ||||||| |||||||||||| |||||    
T  28599170 aatttggagtatagttttttgtgttttctttggaaaaagatttataggaagatgtaaaaataattt 28599235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 35517261 - 35517196
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| ||||||||||| ||| |||||||||||  ||||||||||| |||||    
T  35517261 aatttggagtatagttttttgtgttttctttggaaaaagttttatagtgagatgtaaaaataattt 35517196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 40584436 - 40584485
Alignment:
Q  206 ttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||| ||||||||||||| | ||||||||||||||||||    
T  40584436 ttttgtgttttctttagaataagttttatgggaagatgtaaaaacaattt 40584485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 45085395 - 45085330
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| || ||||||||  || ||||||||||| ||||||||||||||||||    
T  45085395 aatttggagtatagttttttgtattttctttgaaaaaagttttataggaagatgtaaaaacaattt 45085330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 6765953 - 6766020
Alignment:
Q  189 aaaatttggagtatagtttttg-tgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||| ||||||||||||  ||||||| || |||||| |||||||| ||||||||||||||||||    
T  6765953 aaaatttgaagtatagttttttatgttttcattggaataaattttataggaagatgtaaaaacaattt 6766020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 9864740 - 9864806
Alignment:
Q  191 aatttggagtatagtttt--tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||  |||||||||||| |||||||||| || | |||| |||||||||||||    
T  9864740 aatttggagtatagtttttttgtgttttctttggaataagtttcatgggaagaggtaaaaacaattt 9864806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 14874099 - 14874036
Alignment:
Q  193 tttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||| |||||||||||  || ||||||||||| |||||||||||| |||||    
T  14874099 tttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaataattt 14874036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 4891676 - 4891726
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  |||||||||||||| ||||||||||||||||||    
T  4891676 tttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattt 4891726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 25572168 - 25572118
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| |||||||||| || | ||||||||||||||||||    
T  25572168 tttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattt 25572118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 26998440 - 26998390
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  |||||||||||||| ||||||||||||||||||    
T  26998440 tttttgtgttatctttaaaataagttttataggaagatgtaaaaacaattt 26998390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 29524078 - 29524128
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| |||||||||| || | ||||||||||||||||||    
T  29524078 tttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattt 29524128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 33198668 - 33198718
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||  || ||||||||||| ||||||||||||||||||    
T  33198668 tttttgtgttttctttaaaagaagttttataggaagatgtaaaaacaattt 33198718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 43415524 - 43415474
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||  || ||||||||||| ||||||||||||||||||    
T  43415524 tttttgtgttttctttaaaaaaagttttataggaagatgtaaaaacaattt 43415474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 12938380 - 12938315
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||||| ||| |||||||  |||||||||||||| ||  ||||||||||||||    
T  12938380 aatttggagtatagttttttgtgctttctttgaaataagttttataggaaagtgtaaaaacaattt 12938315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 8701742 - 8701675
Alignment:
Q  189 aaaatttggagtatagtttttg-tgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||| || |||||||||  |||||||||| |||||||||| || | ||||||||||||||||||    
T  8701742 aaaatttgtagcatagttttttatgttttctttggaataagtttcatgggaagatgtaaaaacaattt 8701675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 33677623 - 33677556
Alignment:
Q  189 aaaatttggagtatagtttttg-tgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||| || |||||||||  |||||| |||| | |||||||||||| ||||||||||||||||||    
T  33677623 aaaatttgaagaatagttttttatgttttttttttactaagttttataggaagatgtaaaaacaattt 33677556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 28858432 - 28858382
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||||||  || ||||||||||| |||||||||||| |||||    
T  28858432 tttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaataattt 28858382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 32010225 - 32010175
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  |||||||||||||| |||||||||||| |||||    
T  32010225 tttttgtgttatctttgaaataagttttataggaagatgtaaaaataattt 32010175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 32273794 - 32273744
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  |||||||||||||| ||||| ||||||||||||    
T  32273794 tttttgtgttatctttgaaataagttttataggaagatataaaaacaattt 32273744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 38071118 - 38071068
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  ||||||||||| || ||||||||||||||||||    
T  38071118 tttttgtgttatctttgaaataagttttacaggaagatgtaaaaacaattt 38071068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 40808757 - 40808806
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| |||||||||| || | ||||||||||||||||||    
T  40808757 tttttgtgttttctttggaataagtttcat-ggaagatgtaaaaacaattt 40808806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 35023036 - 35022972
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||| ||||| ||||||| ||| || ||||||| |||| ||||||||||||||||||    
T  35023036 aatttggagtataattttttgtgtttt-tttggagtaagtttcataggaagatgtaaaaacaattt 35022972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 41528394 - 41528329
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||| |||||||||||| |||||||||||  |||   |||||||| ||||||||||||||||||    
T  41528394 aatttgaagtatagttttttgtgttttctttgaaattttttttataggaagatgtaaaaacaattt 41528329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 44455127 - 44455086
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttt 231  Q
    ||||||||||||||||||| ||||||| ||||||||||||||    
T  44455127 aatttggagtatagttttttgtgttttattttgaataagttt 44455086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 255
Target Start/End: Complemental strand, 4707558 - 4707494
Alignment:
Q  192 atttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||||| |||||||| || |||||||||| |  | ||||||| ||||||||||    
T  4707558 atttggagtatagttttttgtgttttccttagaataagtttaacgggaagatgttaaaacaattt 4707494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 16494981 - 16495013
Alignment:
Q  223 aataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||| ||||||||||||||||||    
T  16494981 aataagttttataggaagatgtaaaaacaattt 16495013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 1152 - 1089
Alignment:
Q  189 aaaatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaaca 251  Q
    ||||||||||||||||||||| ||||||| |||| || ||||||||||| ||||||||||||||    
T  1152 aaaatttggagtatagttttttgtgtttttttttaaaaaagttttatagaaagatgtaaaaaca 1089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 9112 - 9049
Alignment:
Q  189 aaaatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaaca 251  Q
    ||||||||||||||||||||| ||||||| |||| || ||||||||||| ||||||||||||||    
T  9112 aaaatttggagtatagttttttgtgtttttttttaaaaaagttttatagaaagatgtaaaaaca 9049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 10168 - 10118
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  10168 tttttgtgttttctttagaaaaagttttataggaagatgtaaaaacaattt 10118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 596 - 661
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||||| ||||||||||||  || |||||||||||  |||||||||||||||||    
T  596 aatttggagtatagttttatgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattt 661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 40311 - 40252
Alignment:
Q  197 gagtatag-tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||| |||||||||||||||| |||||| |||||||| ||| ||||||||||||||    
T  40311 gagtatagctttttgtgttttctttggaataaattttatagaaagttgtaaaaacaattt 40252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 154989 - 154934
Alignment:
Q  200 tatagtttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||| ||||||||  || ||||||||||| ||||||||||||||||||    
T  154989 tatagtttttgtattttctttgaaaaaagttttatagaaagatgtaaaaacaattt 154934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 78095 - 78030
Alignment:
Q  191 aatttggagtatagttttt-gtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||| ||||||||||||| |||||||||||  || ||||| ||||| ||||||||||||||||||    
T  78095 aatttagagtatagttttttgtgttttctttgaaaaaagttgtataggaagatgtaaaaacaattt 78030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 5913 - 5963
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| || ||  |||||||||||||| ||||||||||||||||||    
T  5913 tttttgtgttatcattgaaataagttttataggaagatgtaaaaacaattt 5963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 3291 - 3241
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||| |||||  |||||||||||||| ||||| ||||||||||||    
T  3291 tttttgtgttatctttgaaataagttttataggaagatctaaaaacaattt 3241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 157917 - 157867
Alignment:
Q  205 tttttgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    |||||||||||||||| |||||||||| || |  |||||||||||||||||    
T  157917 tttttgtgttttctttggaataagtttcatggggagatgtaaaaacaattt 157867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 44794 - 44859
Alignment:
Q  191 aatttggagtatagtttt-tgtgttttcttttgaataagttttatagcaagatgtaaaaacaattt 255  Q
    ||||||||||||| |||| |||||||||||| ||| ||||||||||| || ||  |||||||||||    
T  44794 aatttggagtatatttttttgtgttttctttggaaaaagttttataggaatattaaaaaacaattt 44859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University