View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6391_low_1 (Length: 678)
Name: NF6391_low_1
Description: NF6391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6391_low_1 |
 | |
|
| [»] scaffold1886 (1 HSPs) |
| | |
|
| [»] scaffold0518 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 437; Significance: 0; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 437; E-Value: 0
Query Start/End: Original strand, 13 - 660
Target Start/End: Original strand, 24754736 - 24755385
Alignment:
| Q |
13 |
aatatcttgaagatttagaataaatatcatccaaaaccagtgtcatgttgacgactgatggtgtaggcgtctcttgtccctgaacttaattagtttcctt |
112 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
24754736 |
aataccttaaagatttagaataaatatcatccaaaaccagtgtcatgttgacgactgatggtgtaggcgtctcttgtccctgaactta----gtttcctt |
24754831 |
T |
|
| Q |
113 |
tcttagcttccttcctttagtgtaagagag--taaagcagatagttattttcattatgttgttctttaaagtttggtggattgttgtttatgtttaaatt |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
24754832 |
tcttagcttccttcctttagtgtaagagagagtaaaggagatagttattttcattatgttgttctttaaagtttggtggattgttgtttatatttaaatt |
24754931 |
T |
|
| Q |
211 |
gagttttaagctctgaaattgtagcatcaggaccgagtttaataaatatgttcttggctttgtttcttggatcttgagaaaatattacatattttatttt |
310 |
Q |
| |
|
|||||||| ||||||| |||||| |||||||||||| |||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24754932 |
gagttttaggctctgatattgtaacatcaggaccgaatttaataa-tatgttcttgactttttttcttggatcttgagaaaatattacatattttatttt |
24755030 |
T |
|
| Q |
311 |
attatgaggatatctgtaaagctctaacaaggaaaaatatttcattttgagttatgacattgagttgctacttgtcatgatgatgtg-------annnnn |
403 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
24755031 |
attatgaggatatttgtaaagctctaacaaggaaaaatattttattttgagttatgacattgagttgctacttgtcatgataatgtgatattttattttt |
24755130 |
T |
|
| Q |
404 |
nnnngacgaaaaatgatgaatttctatcctagactacctgaaatttataatggttaagctcatataagacattaacaatagagtttaaaactt-caaatt |
502 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| | |
|
|
| T |
24755131 |
tttttacgaaaaatgatgaatttctatcctagattacctgaaatttataatggttaagatcatataagacattaacaatagagtttaaaacttccaaaat |
24755230 |
T |
|
| Q |
503 |
ctggatcttattaaacttgnnnnnnnnttgagaaataatgtaaacatttaataaaaataagtgttattgaatttacgaggaatactttaacaaataaata |
602 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24755231 |
ctggatcttat----attgaaaaaaatttgagaaataatgtaaacatttaataaaaataggtgttattgaatttacgaggaatactttaacaaataaata |
24755326 |
T |
|
| Q |
603 |
aagttttctagttataat-ctctgactttgattcagaactccaattgattccatatatt |
660 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24755327 |
aagttttctagttataatcctctgactttgattcagaactccaattgattccatatatt |
24755385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 165 - 651
Target Start/End: Original strand, 24760350 - 24760850
Alignment:
| Q |
165 |
tatgttgttctttaaagtttggtggattgttgtttatgtttaaattgagttttaagctctgaaattgtagcatcaggaccgagtttaataaatatgttct |
264 |
Q |
| |
|
||||||||||||||||||||| |||||| |||||||||||||||||||||| || |||||| ||||| |||||| | ||||||||||| |||| ||| |
|
|
| T |
24760350 |
tatgttgttctttaaagtttgttggattattgtttatgtttaaattgagttctatcctctgatattgtgacatcagtattgagtttaataa-tatgctct |
24760448 |
T |
|
| Q |
265 |
tggctttgtttcttggatcttgagaaaatattacatattttattttattatgaggatatctgtaaagctctaacaaggaaaaatatttcattttgagtta |
364 |
Q |
| |
|
|| ||| |||||||||||||||||||||||||||||||||||||| |||||| ||| ||||| ||||||| |||||||||||||| ||||||||||| |
|
|
| T |
24760449 |
tgtcttattttcttggatcttgagaaaatattacatattttattttcttatgaaaataattgtaaggctctaagaaggaaaaatattttattttgagtta |
24760548 |
T |
|
| Q |
365 |
tgacattgagttgctacttgtcatgatgatgtga-----------nnnnnnnnngacgaaaaatgatgaatttctatcctagactacctgaaatttataa |
453 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||| |||| || |||| ||||| | |||||||||||| |
|
|
| T |
24760549 |
tgacattgagttgctacttgtcatgatgatgtgatttttttattttattttatttacgaaaaatcatgatttggtatctcagactgcatgaaatttataa |
24760648 |
T |
|
| Q |
454 |
tggttaagctcatataagacattaacaatagagtttaaaacttcaaattctggatcttattaaacttg--nnnnnnnnttgagaaataatgtaaacattt |
551 |
Q |
| |
|
||| |||| |||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||| |||| |
|
|
| T |
24760649 |
tggctaagttcatttaagacattaccaatagagtttaaaacttcaaaatctggatcttattaaacttgaaaaaaagatcttagaaataatgtaaatattt |
24760748 |
T |
|
| Q |
552 |
aataaaaataagtgttattgaatttacgaggaatactttaacaaataaataaagttttctagtt-ataa-tctctgactttgattcagaactccaattga |
649 |
Q |
| |
|
||||||||| |||||| | |||||| ||||||| |||||||||||| || | |||||||||| |||| |||| ||||||||||| ||||||||| || |
|
|
| T |
24760749 |
cataaaaataggtgttaatatatttacaaggaataatttaacaaataattacaattttctagttaataagcctctaactttgattcaaaactccaatcga |
24760848 |
T |
|
| Q |
650 |
tt |
651 |
Q |
| |
|
|| |
|
|
| T |
24760849 |
tt |
24760850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 163 - 513
Target Start/End: Original strand, 24843719 - 24844070
Alignment:
| Q |
163 |
attatgttgttctttaaagtttggtggattgttgtttatgtttaaattgagttttaagctctgaaattgtagcatcaggaccgagtttaataaatatgtt |
262 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||| ||||||||||||||||| || ||||||| |||| ||| ||||||||||||||||| ||||| |
|
|
| T |
24843719 |
attatgttgttctttaaagtttgttggattattgtgtatgtttaaattgagttctaggctctgatgttgtgacattaggaccgagtttaataa-tatgta |
24843817 |
T |
|
| Q |
263 |
cttggctttgtttcttggatcttgagaaaatattacatattttattttattatgaggatatctgtaaagctctaacaaggaaaaatatttcattttgagt |
362 |
Q |
| |
|
|||| ||| ||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||||| | |||||||||||| ||||||||| |
|
|
| T |
24843818 |
cttgacttattttgttggat------aaaatattacatattttattttattatgaggataattgtaaggctctaagatggaaaaatattttattttgagt |
24843911 |
T |
|
| Q |
363 |
tatgacattgagttgctacttgtcatgatgatgtgannnnnnnnn------gacgaaaaatgatgaatttctatcctaga--ctacctgaaatttataat |
454 |
Q |
| |
|
||| ||||||||||| | |||||||||| ||||| | ||||||||||| || || |||| |||| | || | ||||||||||| |
|
|
| T |
24843912 |
tataacattgagttggtgcttgtcatgacgatgttatatctttttttttctgacgaaaaatggcgatttggtatcttagagacaacataaaatttataat |
24844011 |
T |
|
| Q |
455 |
ggttaagctcatataagacattaacaatagagtttaaaacttcaaattctggatcttat |
513 |
Q |
| |
|
|| |||| | ||||||||||||||||||||||||||| |||||||| | |||||||||| |
|
|
| T |
24844012 |
ggctaagttaatataagacattaacaatagagtttaagacttcaaaatttggatcttat |
24844070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 163 - 398
Target Start/End: Original strand, 16652471 - 16652704
Alignment:
| Q |
163 |
attatgttgttctttaaagtttggtggattgttgtttatgtttaaattgagttttaagctctgaaattgtagcatcaggaccgagtttaataaatatgtt |
262 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||||||||||||||||||| || ||||||| ||||| ||||||| ||||||||| |||||||| |
|
|
| T |
16652471 |
attatgttgttctttaaagtttgttggattattgtttatgtttaaattgagttctaggctctgatattgtgacatcagggttgagtttaat-aatatgtt |
16652569 |
T |
|
| Q |
263 |
cttggctttgtttcttggatcttgagaaaatattacatattttattttattatgaggatatctgtaaagctctaacaaggaaaaatatttcattttgagt |
362 |
Q |
| |
|
|| | | | ||||| | ||| || |||||||||||||||||||||||||||||| |||| ||||| |||||| ||| ||| |||||| | ||||||| |
|
|
| T |
16652570 |
ctagacatattttctagtatcctgcgaaaatattacatattttattttattatgaagataattgtaagactctaagaagaaaatatatttta-tttgagt |
16652668 |
T |
|
| Q |
363 |
tatgacattgagttgctacttgtcatgatgatgtga |
398 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
16652669 |
tatgactttgagttgctatttgtcatgatgatgtga |
16652704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 163 - 513
Target Start/End: Original strand, 24840261 - 24840610
Alignment:
| Q |
163 |
attatgttgttctttaaagtttggtggattgttgtttatgtttaaattgagttttaagctctgaaattgtagcatcaggaccgagtttaataaatatgtt |
262 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||| ||||||| |||| |||| || ||||||| | || ||||||||||||||||||||| ||||| |
|
|
| T |
24840261 |
attatgttgttctttaaagtttgttggattattgtgtatgtttcaattaagttctaggctctgatgtcgtgacatcaggaccgagtttaataa-tatgta |
24840359 |
T |
|
| Q |
263 |
cttggctttgtttcttggatcttgagaaaatattacatattttattttattatgaggatatctgtaaagctctaacaaggaaaaatatttcattttgagt |
362 |
Q |
| |
|
|||| ||| ||| ||| || ||||||||||||||||||||||||| |||||||| ||||| || ||| | |||||||||||| ||||||||| |
|
|
| T |
24840360 |
cttgacttattttgttgaat------aaaatattacatattttattttattttgaggataattgtaaggccataagatggaaaaatattttattttgagt |
24840453 |
T |
|
| Q |
363 |
tatgacattgagttgctacttgtcatgatgatgtga----nnnnnnnnngacgaaaaatgatgaatttctatcct--agactacctgaaatttataatgg |
456 |
Q |
| |
|
||| ||||||||||| | |||||||||| ||||| | |||||||||||| || || |||| | ||||||| | ||||||||||||| |
|
|
| T |
24840454 |
tataacattgagttggtgcttgtcatgacgatgttatatctttttttctgacgaaaaatgacgatttggtatcttagagactacataaaatttataatgg |
24840553 |
T |
|
| Q |
457 |
ttaagctcatataagacattaacaatagagtttaaaacttcaaattctggatcttat |
513 |
Q |
| |
|
|||| | |||||||||||||||||| ||||||||||||||||| | |||||||||| |
|
|
| T |
24840554 |
ctaagttaatataagacattaacaattgagtttaaaacttcaaaatatggatcttat |
24840610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 24746700 - 24746785
Alignment:
| Q |
13 |
aatatcttgaagatttagaataaatatcatccaaaacc-agtgtcatgttgacgactgatggtgtaggcgtctcttgtccctgaac |
97 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
24746700 |
aataccttgaagatttagagtaaatatcatccaaaacccagtgtcatgttgacgattgatggtgtaggcgtctcttgtccctgaac |
24746785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 536 - 660
Target Start/End: Original strand, 16654274 - 16654399
Alignment:
| Q |
536 |
aataatgtaaacatttaataaaaataagtgttattgaatttacgaggaatactttaacaaataaataaagttttctagttataatc-tctgactttgatt |
634 |
Q |
| |
|
||||||||||| |||| |||||| || |||||| | |||||| ||||||||||||||||||||||||| || |||||||||| | ||||||||||||| |
|
|
| T |
16654274 |
aataatgtaaatattttataaaagtaggtgttaatatatttacaaggaatactttaacaaataaataaaacttcctagttataagcttctgactttgatt |
16654373 |
T |
|
| Q |
635 |
cagaactccaattgattccatatatt |
660 |
Q |
| |
|
||||||||||| ||||||||||||| |
|
|
| T |
16654374 |
tagaactccaatcgattccatatatt |
16654399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 12373853 - 12373923
Alignment:
| Q |
275 |
tcttggatcttgagaaaatattacatattttattttattatgaggatatctgtaaagctctaacaaggaaa |
345 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||| ||||||| |
|
|
| T |
12373853 |
tctttgatcttgagaaaaaattacatattttattttattttgaggataattgtaaggctctaagaaggaaa |
12373923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 275 - 347
Target Start/End: Original strand, 12333112 - 12333184
Alignment:
| Q |
275 |
tcttggatcttgagaaaatattacatattttattttattatgaggatatctgtaaagctctaacaaggaaaaa |
347 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| |||||||| | ||| |||||| ||||||||| |
|
|
| T |
12333112 |
tcttggatcttgagaaaacattacatattttattttattgtgaggataattataaggctctacgaaggaaaaa |
12333184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 463 - 521
Target Start/End: Original strand, 12333260 - 12333318
Alignment:
| Q |
463 |
tcatataagacattaacaatagagtttaaaacttcaaattctggatcttattaaacttg |
521 |
Q |
| |
|
|||||||||| |||||||| ||| ||||||||||||| | |||||||||||||||||| |
|
|
| T |
12333260 |
tcatataagatattaacaaaagatattaaaacttcaaaatatggatcttattaaacttg |
12333318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 12373739 - 12373785
Alignment:
| Q |
165 |
tatgttgttctttaaagtttggtggattgttgtttatgtttaaattg |
211 |
Q |
| |
|
|||||| ||||||||| |||| |||||| |||||||||||||||||| |
|
|
| T |
12373739 |
tatgtttttctttaaaatttgttggattattgtttatgtttaaattg |
12373785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 24577533 - 24577489
Alignment:
| Q |
164 |
ttatgttgttctttaaagtttggtggattgttgtttatgtttaaa |
208 |
Q |
| |
|
||||||||||||| || ||||| ||||||||| |||||||||||| |
|
|
| T |
24577533 |
ttatgttgttcttgaatgtttgttggattgttatttatgtttaaa |
24577489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 46; Significance: 7e-17; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 13790301 - 13790196
Alignment:
| Q |
287 |
agaaaatattacatattttattttattatgaggatatctgtaaagctctaacaaggaaaaatatttcattttgagttatgacattgagttgctacttgtc |
386 |
Q |
| |
|
|||||| ||||||||||||||||||| | ||||| ||||| ||||||| |||||||||||||| ||||||||||||| ||| | || ||||||||| |
|
|
| T |
13790301 |
agaaaacattacatattttattttatattatggataattgtaaggctctaataaggaaaaatattttattttgagttatggaattaaatttctacttgtc |
13790202 |
T |
|
| Q |
387 |
atgatg |
392 |
Q |
| |
|
|||||| |
|
|
| T |
13790201 |
atgatg |
13790196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 13804556 - 13804451
Alignment:
| Q |
287 |
agaaaatattacatattttattttattatgaggatatctgtaaagctctaacaaggaaaaatatttcattttgagttatgacattgagttgctacttgtc |
386 |
Q |
| |
|
|||||| ||||||||||||||||||| | ||||| ||||| ||||||| |||||||||||||| ||||||||||||| ||| | || ||||||||| |
|
|
| T |
13804556 |
agaaaacattacatattttattttatattatggataattgtaaggctctaataaggaaaaatattttattttgagttatggaattaaatttctacttgtc |
13804457 |
T |
|
| Q |
387 |
atgatg |
392 |
Q |
| |
|
|||||| |
|
|
| T |
13804456 |
atgatg |
13804451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 285 - 392
Target Start/End: Original strand, 13722165 - 13722271
Alignment:
| Q |
285 |
tgagaaaatattacatattttattttattatgaggatatctgtaaagctctaacaaggaaaaatatttcattttgagttatgacattgagttgctacttg |
384 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||| ||||| ||||| | ||| ||||| ||| |||||||||||||||||| || || |||| |
|
|
| T |
13722165 |
tgagaaaacattacatattttattttattttgaggataattgtaatgctct-aggaggcaaaatgttttattttgagttatgacattatatttcttcttg |
13722263 |
T |
|
| Q |
385 |
tcatgatg |
392 |
Q |
| |
|
|||||||| |
|
|
| T |
13722264 |
tcatgatg |
13722271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 13736110 - 13736214
Alignment:
| Q |
287 |
agaaaatattacatattttattttattatgaggatatctgtaaagctctaacaaggaaaaatatttcattttgagttatgacattgagttgctacttgtc |
386 |
Q |
| |
|
|||||| |||||||||||||||||||| ||| |||| ||||| ||||||| || | ||||||||| ||||| ||| |||||||| | || | ||||||| |
|
|
| T |
13736110 |
agaaaacattacatattttattttattttga-gataattgtaaggctctaagaatgcaaaatattttattttcagtgatgacattaaatttcaacttgtc |
13736208 |
T |
|
| Q |
387 |
atgatg |
392 |
Q |
| |
|
|||||| |
|
|
| T |
13736209 |
atgatg |
13736214 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 392
Target Start/End: Complemental strand, 13782927 - 13782866
Alignment:
| Q |
331 |
gctctaacaaggaaaaatatttcattttgagttatgacattgagttgctacttgtcatgatg |
392 |
Q |
| |
|
||||||| |||||||||||||| ||||||||||||| ||| | || ||||||||||||||| |
|
|
| T |
13782927 |
gctctaataaggaaaaatattttattttgagttatggaattaaatttctacttgtcatgatg |
13782866 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 24305034 - 24305079
Alignment:
| Q |
277 |
ttggatcttgagaaaatattacatattttattttattatgaggata |
322 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
24305034 |
ttggatcttgagaaaatattacatatattattttattacgaggata |
24305079 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 16305196 - 16305244
Alignment:
| Q |
172 |
ttctttaaagtttggtggattgttgtttatgtttaaattgagttttaag |
220 |
Q |
| |
|
|||||||||||||| || ||| ||||||||||||||||| |||||||| |
|
|
| T |
16305196 |
ttctttaaagtttgttgtattcatgtttatgtttaaattgtgttttaag |
16305244 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1886 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1886
Description:
Target: scaffold1886; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 1226 - 1268
Alignment:
| Q |
163 |
attatgttgttctttaaagtttggtggattgttgtttatgttt |
205 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||| ||||||| |
|
|
| T |
1226 |
attatgttgttctttaaagtttgttggattattgtgtatgttt |
1268 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0518 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0518
Description:
Target: scaffold0518; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 325 - 398
Target Start/End: Complemental strand, 1502 - 1431
Alignment:
| Q |
325 |
tgtaaagctctaacaaggaaaaatatttcattttgagttatgacattgagttgctacttgtcatgatgatgtga |
398 |
Q |
| |
|
||||| ||||||| | |||||||||||| ||| ||||||||||||| | || |||||| |||||||||||||| |
|
|
| T |
1502 |
tgtaaggctctaagacggaaaaatattttatt--gagttatgacattaaatttctacttttcatgatgatgtga |
1431 |
T |
|
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