View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6392_high_7 (Length: 617)
Name: NF6392_high_7
Description: NF6392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6392_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 584; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 584; E-Value: 0
Query Start/End: Original strand, 1 - 607
Target Start/End: Original strand, 26277242 - 26277849
Alignment:
| Q |
1 |
tcctaaatgtatcagcttattggtacagttacgactgaggtaaagtgtagcgctgctatgatgtttggagcaagaaacacttccagttttgacttacgta |
100 |
Q |
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| T |
26277242 |
tcctaaatgtatcagcttattggtacagttacgactgaggtaaagtgtagcactgctatgatgtttggagcaagaaacacttccagttttgacttacgta |
26277341 |
T |
|
| Q |
101 |
taggtgcgcttttccagctggcccctcgtcctagtaggcagatttcttcctcttcggttttctggatccttcctcacaggggctgtcgaaaaattaatgt |
200 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
26277342 |
taggtgcgcttttccagctggcccctcgtcccagtaggcagatttcttcctcttcggttttctggatccttcctcacaggggctgtcggaaaattaatgt |
26277441 |
T |
|
| Q |
201 |
ggatggctccactttgggttctccttcttgtggtgctattggtgtggctgttcgtgactgggagggaacttttttggcaggttttgtcctgaatattggg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26277442 |
ggatggctccactttgggttctccttcttgtggtgctattggtgtggctgttcgtgactgggagggaacttttttggcaggttttgtcctgaatattggg |
26277541 |
T |
|
| Q |
301 |
cattcctctgcgtttgtagctgagctgtgcaccgctatgtttgcaattgagaaagctgtggagctgaattggtcggacatatggattgaaacggactcac |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26277542 |
cattcctctgcgtttgtagctgagctgtgcaccgctatgtttgcaattgagaaagctgtggagctgaattggtcggacatatggattgaaacggactcac |
26277641 |
T |
|
| Q |
401 |
ttatggtggtgaaagctttctctcaacacattgcagttccttggactttgagagttagatggcgcaattgtatag-cttaccgagactttttcttgtcgt |
499 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
26277642 |
ttatggtggtgaaagctttctctcaacacattgcagttccttggactttgagagttagatggcgcaattgtatagccttaccgagactttttcttgtcgt |
26277741 |
T |
|
| Q |
500 |
ttcacacacatccatagggagtgtaactctggccaatgagtaagttaagcatggtcatagtttacactcacaatggtggacggatcccccacatttattt |
599 |
Q |
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| T |
26277742 |
tccacacacatccatagggagtgtaactctggccaatgagtaagttaagcatggtcatagtttacactcacaatggtggacggatcccccacatttattt |
26277841 |
T |
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| Q |
600 |
tgcctttg |
607 |
Q |
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|||||||| |
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| T |
26277842 |
tgcctttg |
26277849 |
T |
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