View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6392_high_91 (Length: 238)
Name: NF6392_high_91
Description: NF6392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6392_high_91 |
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Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 40491923 - 40491714
Alignment:
| Q |
11 |
gaattaagggtgtgtatatataatcaccaaaaagagaaataaggtgaccaaagctttatgtgccagatactcttacctaaataaattaccacatcatcac |
110 |
Q |
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| T |
40491923 |
gaattaagggtgtgtatatataatcaccaaaaagagaaataaggtgaccaaagctttatgtgccagatactcttacctaaataaattaccacatcatcac |
40491824 |
T |
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| Q |
111 |
ccacttatctacaaaaagctacactacacgtattattaaccattcatgtcatcaatcatcatacattgctaagatttactgaatattttgagaatctcca |
210 |
Q |
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| T |
40491823 |
ccacttatctacaaaaagctacactacacgtattattaaccattcatgtcatcaatcatcatacattgctaagatttactgaatattttgagaatctcca |
40491724 |
T |
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| Q |
211 |
aatcattaac |
220 |
Q |
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|||||||||| |
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| T |
40491723 |
aatcattaac |
40491714 |
T |
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