View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6392_low_13 (Length: 534)

Name: NF6392_low_13
Description: NF6392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6392_low_13
NF6392_low_13
[»] chr8 (47 HSPs)
chr8 (20-303)||(39683438-39683721)
chr8 (20-256)||(1372409-1372646)
chr8 (104-264)||(20305947-20306109)
chr8 (104-264)||(21092580-21092742)
chr8 (104-245)||(34639227-34639368)
chr8 (120-264)||(4718700-4718846)
chr8 (120-259)||(15259411-15259552)
chr8 (123-264)||(8765526-8765669)
chr8 (104-264)||(3734623-3734785)
chr8 (120-264)||(34237655-34237801)
chr8 (120-257)||(14633009-14633148)
chr8 (120-265)||(21603285-21603432)
chr8 (120-257)||(39349311-39349450)
chr8 (120-265)||(42643117-42643264)
chr8 (105-225)||(18128553-18128675)
chr8 (104-175)||(26168939-26169010)
chr8 (114-175)||(6953097-6953159)
chr8 (130-264)||(34610687-34610823)
chr8 (104-228)||(13749094-13749221)
chr8 (104-175)||(27746425-27746497)
chr8 (120-264)||(32879334-32879480)
chr8 (120-259)||(28193529-28193670)
chr8 (198-265)||(43817748-43817815)
chr8 (130-264)||(2618251-2618387)
chr8 (198-264)||(2639411-2639477)
chr8 (198-264)||(19471745-19471811)
chr8 (198-264)||(19542669-19542735)
chr8 (198-264)||(19589961-19590027)
chr8 (104-172)||(3403596-3403664)
chr8 (123-265)||(25248407-25248548)
chr8 (104-171)||(28964072-28964140)
chr8 (104-172)||(34694670-34694738)
chr8 (485-517)||(39683903-39683935)
chr8 (104-172)||(41070800-41070868)
chr8 (120-264)||(42328059-42328205)
chr8 (198-265)||(2166831-2166898)
chr8 (109-172)||(3794835-3794898)
chr8 (104-175)||(8387535-8387606)
chr8 (120-174)||(18532162-18532217)
chr8 (118-161)||(24999287-24999330)
chr8 (120-154)||(10292110-10292144)
chr8 (198-264)||(33747017-33747083)
chr8 (110-172)||(36094729-36094791)
chr8 (104-176)||(36848838-36848911)
chr8 (120-175)||(20469972-20470028)
chr8 (120-175)||(28088341-28088397)
chr8 (105-137)||(29855419-29855451)
[»] chr4 (45 HSPs)
chr4 (29-229)||(38740810-38741012)
chr4 (133-265)||(47464107-47464240)
chr4 (104-264)||(40058852-40059014)
chr4 (120-233)||(22630220-22630332)
chr4 (123-264)||(45787704-45787847)
chr4 (120-264)||(34844758-34844904)
chr4 (120-259)||(52983670-52983811)
chr4 (104-175)||(25852249-25852321)
chr4 (120-264)||(27528795-27528941)
chr4 (104-259)||(12710214-12710369)
chr4 (104-175)||(19220568-19220639)
chr4 (202-264)||(51535756-51535818)
chr4 (102-228)||(9646252-9646380)
chr4 (104-176)||(7392053-7392125)
chr4 (104-171)||(34835564-34835632)
chr4 (198-265)||(35229299-35229366)
chr4 (202-265)||(52494623-52494686)
chr4 (195-245)||(10143788-10143838)
chr4 (120-176)||(1985887-1985944)
chr4 (123-175)||(18875606-18875659)
chr4 (199-264)||(44343646-44343711)
chr4 (120-264)||(19660532-19660678)
chr4 (125-265)||(20566406-20566548)
chr4 (120-175)||(22625160-22625216)
chr4 (120-264)||(32986248-32986394)
chr4 (120-175)||(33696369-33696425)
chr4 (124-264)||(34723854-34723996)
chr4 (104-228)||(54127378-54127504)
chr4 (121-175)||(5609292-5609347)
chr4 (109-171)||(13771577-13771640)
chr4 (104-175)||(41621687-41621758)
chr4 (119-172)||(12500151-12500205)
chr4 (119-176)||(13873384-13873442)
chr4 (130-175)||(32942431-32942477)
chr4 (104-153)||(38869810-38869860)
chr4 (200-242)||(51961993-51962035)
chr4 (203-264)||(23131436-23131497)
chr4 (104-174)||(25969592-25969664)
chr4 (119-175)||(35674831-35674888)
chr4 (134-175)||(39288924-39288965)
chr4 (120-172)||(49287909-49287962)
chr4 (104-175)||(13584344-13584416)
chr4 (104-172)||(16339715-16339783)
chr4 (120-175)||(20078074-20078130)
chr4 (197-265)||(51595152-51595220)
[»] chr3 (54 HSPs)
chr3 (72-229)||(31766694-31766853)
chr3 (104-264)||(40133449-40133611)
chr3 (104-264)||(30257659-30257821)
chr3 (105-175)||(50162079-50162149)
chr3 (120-264)||(53424177-53424322)
chr3 (120-265)||(35492962-35493109)
chr3 (120-264)||(45529755-45529900)
chr3 (120-264)||(46576399-46576545)
chr3 (120-265)||(52821635-52821781)
chr3 (120-264)||(15566500-15566645)
chr3 (104-265)||(26158853-26159009)
chr3 (120-265)||(21362994-21363141)
chr3 (120-265)||(49258261-49258408)
chr3 (120-264)||(8456150-8456296)
chr3 (120-264)||(25289715-25289860)
chr3 (104-264)||(48977423-48977585)
chr3 (104-172)||(50583027-50583095)
chr3 (104-256)||(4252404-4252558)
chr3 (198-265)||(33398467-33398534)
chr3 (104-161)||(7485630-7485687)
chr3 (132-230)||(1242036-1242136)
chr3 (104-175)||(7470305-7470377)
chr3 (124-264)||(8097279-8097421)
chr3 (120-175)||(26108343-26108399)
chr3 (120-264)||(26174164-26174310)
chr3 (120-175)||(30807243-30807299)
chr3 (122-264)||(53233911-53234054)
chr3 (198-264)||(32151555-32151621)
chr3 (122-228)||(45272452-45272560)
chr3 (198-264)||(53848434-53848500)
chr3 (120-265)||(18176886-18177033)
chr3 (120-225)||(34492614-34492721)
chr3 (200-265)||(54475814-54475879)
chr3 (120-175)||(2511387-2511443)
chr3 (124-264)||(10190742-10190884)
chr3 (201-265)||(24407395-24407459)
chr3 (104-151)||(39253739-39253787)
chr3 (104-160)||(40268531-40268587)
chr3 (120-175)||(40940876-40940932)
chr3 (104-175)||(34844413-34844484)
chr3 (201-256)||(55371302-55371357)
chr3 (198-264)||(8958035-8958101)
chr3 (198-264)||(24165715-24165781)
chr3 (203-265)||(50731236-50731298)
chr3 (203-265)||(50781556-50781618)
chr3 (125-174)||(1178228-1178277)
chr3 (122-174)||(14343379-14343432)
chr3 (195-228)||(19857179-19857212)
chr3 (104-161)||(40777055-40777112)
chr3 (123-160)||(48972817-48972854)
chr3 (119-175)||(51532839-51532896)
chr3 (120-161)||(52455754-52455795)
chr3 (104-172)||(53288805-53288874)
chr3 (104-160)||(53863845-53863901)
[»] chr2 (43 HSPs)
chr2 (104-264)||(8192352-8192513)
chr2 (118-265)||(19174812-19174960)
chr2 (104-175)||(28194224-28194295)
chr2 (104-264)||(15037994-15038156)
chr2 (104-176)||(19605935-19606007)
chr2 (120-264)||(33827573-33827719)
chr2 (120-264)||(24196055-24196199)
chr2 (196-264)||(18976455-18976523)
chr2 (120-264)||(36242312-36242458)
chr2 (104-176)||(5394052-5394125)
chr2 (120-264)||(44946053-44946199)
chr2 (198-265)||(44929845-44929912)
chr2 (107-172)||(3405246-3405311)
chr2 (120-265)||(30466829-30466976)
chr2 (120-175)||(10582080-10582136)
chr2 (120-175)||(17324817-17324873)
chr2 (106-174)||(26176289-26176357)
chr2 (107-175)||(30943134-30943202)
chr2 (120-264)||(35171851-35171997)
chr2 (120-226)||(44976191-44976300)
chr2 (198-265)||(11941209-11941276)
chr2 (105-172)||(19525490-19525557)
chr2 (104-175)||(40591218-40591289)
chr2 (104-172)||(4618779-4618847)
chr2 (198-254)||(4852660-4852716)
chr2 (107-159)||(20297602-20297654)
chr2 (119-245)||(12543194-12543321)
chr2 (198-265)||(25293290-25293357)
chr2 (198-264)||(2140486-2140552)
chr2 (202-264)||(14486960-14487022)
chr2 (198-264)||(18692091-18692157)
chr2 (119-176)||(23787097-23787155)
chr2 (119-175)||(3943790-3943847)
chr2 (120-161)||(25293217-25293258)
chr2 (199-264)||(27269344-27269409)
chr2 (104-153)||(41329878-41329927)
chr2 (120-161)||(43374430-43374471)
chr2 (200-264)||(5394150-5394214)
chr2 (104-196)||(8024740-8024832)
chr2 (120-175)||(27290639-27290695)
chr2 (104-171)||(32845126-32845194)
chr2 (120-172)||(36179927-36179979)
chr2 (120-175)||(41314043-41314099)
[»] chr7 (45 HSPs)
chr7 (104-264)||(28647008-28647170)
chr7 (104-264)||(23330739-23330901)
chr7 (109-264)||(654705-654861)
chr7 (104-264)||(2751310-2751472)
chr7 (120-264)||(7275332-7275478)
chr7 (104-264)||(11997888-11998050)
chr7 (120-264)||(22119943-22120089)
chr7 (120-264)||(40542910-40543056)
chr7 (120-265)||(17196949-17197096)
chr7 (104-173)||(37056253-37056322)
chr7 (104-264)||(2344338-2344500)
chr7 (120-264)||(29861725-29861871)
chr7 (104-175)||(12211626-12211697)
chr7 (123-264)||(21835209-21835352)
chr7 (120-257)||(22703541-22703680)
chr7 (120-256)||(7175870-7176008)
chr7 (120-264)||(16374049-16374195)
chr7 (120-175)||(21217923-21217979)
chr7 (104-264)||(21574102-21574265)
chr7 (198-265)||(8943400-8943467)
chr7 (104-265)||(22696359-22696523)
chr7 (119-172)||(1469166-1469219)
chr7 (104-216)||(8435745-8435857)
chr7 (120-241)||(10091243-10091366)
chr7 (120-265)||(18044162-18044309)
chr7 (104-161)||(40332138-40332195)
chr7 (104-172)||(42814903-42814972)
chr7 (120-175)||(2103110-2103166)
chr7 (104-175)||(13332513-13332585)
chr7 (104-175)||(19421270-19421342)
chr7 (120-175)||(27009414-27009470)
chr7 (104-175)||(27312191-27312263)
chr7 (119-175)||(36173089-36173145)
chr7 (198-265)||(3851892-3851959)
chr7 (104-143)||(22264625-22264664)
chr7 (201-264)||(31712902-31712965)
chr7 (130-263)||(1766145-1766279)
chr7 (198-264)||(27312287-27312353)
chr7 (202-264)||(33137825-33137887)
chr7 (109-174)||(5844617-5844682)
chr7 (104-254)||(47541423-47541574)
chr7 (104-172)||(3951084-3951152)
chr7 (104-175)||(9718077-9718149)
chr7 (120-175)||(17212108-17212164)
chr7 (205-265)||(36772302-36772362)
[»] chr5 (47 HSPs)
chr5 (104-265)||(19145411-19145573)
chr5 (120-264)||(18207258-18207404)
chr5 (104-264)||(27498731-27498893)
chr5 (104-264)||(32059440-32059602)
chr5 (120-264)||(38684259-38684404)
chr5 (104-265)||(36895460-36895623)
chr5 (120-175)||(38631051-38631107)
chr5 (120-264)||(19456211-19456355)
chr5 (120-225)||(42193536-42193641)
chr5 (120-265)||(34310193-34310340)
chr5 (120-264)||(8484661-8484807)
chr5 (120-264)||(15641106-15641251)
chr5 (120-265)||(11926500-11926648)
chr5 (198-265)||(13659244-13659311)
chr5 (198-264)||(38630979-38631045)
chr5 (120-264)||(30485879-30486025)
chr5 (198-265)||(13038454-13038521)
chr5 (198-265)||(22693066-22693133)
chr5 (121-265)||(24158165-24158311)
chr5 (104-170)||(8780513-8780579)
chr5 (198-264)||(35425144-35425210)
chr5 (202-264)||(42006868-42006930)
chr5 (195-264)||(7085626-7085695)
chr5 (198-259)||(11464913-11464974)
chr5 (198-263)||(13108451-13108516)
chr5 (122-175)||(15931112-15931165)
chr5 (199-264)||(37495186-37495251)
chr5 (120-175)||(1827620-1827676)
chr5 (104-175)||(4603812-4603884)
chr5 (120-175)||(13038544-13038600)
chr5 (120-175)||(25586983-25587039)
chr5 (120-175)||(33709591-33709647)
chr5 (120-175)||(37495098-37495154)
chr5 (119-159)||(37810619-37810659)
chr5 (200-264)||(41351104-41351168)
chr5 (107-174)||(32061202-32061269)
chr5 (109-175)||(2499269-2499335)
chr5 (198-228)||(22392819-22392849)
chr5 (119-257)||(23270529-23270669)
chr5 (119-175)||(5049187-5049244)
chr5 (123-175)||(13108539-13108592)
chr5 (104-172)||(15485385-15485453)
chr5 (102-143)||(19883168-19883209)
chr5 (203-264)||(20508849-20508909)
chr5 (119-175)||(10824050-10824106)
chr5 (198-258)||(33709509-33709569)
chr5 (119-159)||(37684836-37684876)
[»] chr1 (47 HSPs)
chr1 (104-256)||(25236997-25237151)
chr1 (120-265)||(24674444-24674591)
chr1 (120-264)||(4621237-4621383)
chr1 (104-264)||(32729580-32729741)
chr1 (120-264)||(15059402-15059548)
chr1 (108-264)||(1486457-1486617)
chr1 (104-265)||(9926145-9926310)
chr1 (119-264)||(16539658-16539804)
chr1 (120-265)||(24122074-24122221)
chr1 (104-239)||(10059090-10059227)
chr1 (120-228)||(23734167-23734278)
chr1 (120-228)||(23741359-23741470)
chr1 (104-228)||(30677211-30677337)
chr1 (104-175)||(46607845-46607917)
chr1 (120-174)||(7197338-7197392)
chr1 (104-226)||(1138614-1138738)
chr1 (120-241)||(8077698-8077820)
chr1 (104-161)||(39964547-39964604)
chr1 (104-172)||(45859136-45859205)
chr1 (104-172)||(24217013-24217081)
chr1 (104-175)||(37351551-37351623)
chr1 (120-259)||(17935820-17935961)
chr1 (198-264)||(8254752-8254818)
chr1 (119-175)||(168251-168308)
chr1 (120-241)||(7766750-7766873)
chr1 (123-172)||(16899557-16899606)
chr1 (120-257)||(27454871-27455012)
chr1 (198-259)||(34778470-34778531)
chr1 (120-175)||(9500445-9500501)
chr1 (119-175)||(19034477-19034533)
chr1 (119-175)||(29057428-29057484)
chr1 (201-241)||(50202680-50202720)
chr1 (104-175)||(20907352-20907423)
chr1 (120-263)||(21726780-21726925)
chr1 (104-175)||(37047027-37047098)
chr1 (198-264)||(22910002-22910068)
chr1 (111-172)||(809264-809325)
chr1 (120-161)||(2272395-2272436)
chr1 (120-172)||(7578460-7578513)
chr1 (200-265)||(23041655-23041720)
chr1 (109-170)||(25496584-25496645)
chr1 (120-265)||(36155887-36156034)
chr1 (198-259)||(37351458-37351519)
chr1 (120-172)||(46113495-46113548)
chr1 (120-175)||(7946895-7946951)
chr1 (120-175)||(23232355-23232411)
chr1 (104-175)||(49101731-49101802)
[»] chr6 (30 HSPs)
chr6 (104-245)||(17149475-17149618)
chr6 (104-224)||(9208287-9208409)
chr6 (104-264)||(15360098-15360260)
chr6 (120-264)||(3222636-3222781)
chr6 (122-264)||(34147399-34147543)
chr6 (122-264)||(34160015-34160159)
chr6 (120-264)||(5360071-5360217)
chr6 (104-264)||(28672102-28672264)
chr6 (120-241)||(12390476-12390599)
chr6 (120-264)||(654146-654292)
chr6 (120-264)||(1344986-1345132)
chr6 (104-259)||(10377750-10377908)
chr6 (120-259)||(9239026-9239167)
chr6 (120-264)||(21148511-21148656)
chr6 (104-162)||(21182361-21182419)
chr6 (104-169)||(8479347-8479412)
chr6 (120-241)||(11448922-11449045)
chr6 (102-161)||(28028570-28028629)
chr6 (99-160)||(9583403-9583464)
chr6 (195-264)||(14504082-14504151)
chr6 (104-172)||(33499509-33499578)
chr6 (104-175)||(12591672-12591744)
chr6 (120-175)||(14212943-14212999)
chr6 (104-155)||(6691533-6691584)
chr6 (198-257)||(11007296-11007355)
chr6 (104-153)||(3779381-3779431)
chr6 (20-50)||(19146190-19146220)
chr6 (105-153)||(11103419-11103468)
chr6 (119-175)||(6164366-6164422)
chr6 (120-152)||(22576118-22576150)
[»] scaffold0576 (1 HSPs)
scaffold0576 (104-264)||(5082-5244)
[»] scaffold0070 (1 HSPs)
scaffold0070 (120-264)||(40376-40521)
[»] scaffold0019 (1 HSPs)
scaffold0019 (120-264)||(161860-162006)
[»] scaffold0026 (1 HSPs)
scaffold0026 (109-175)||(97456-97523)
[»] scaffold0717 (1 HSPs)
scaffold0717 (120-176)||(47-104)
[»] scaffold0623 (1 HSPs)
scaffold0623 (120-264)||(1057-1202)
[»] scaffold0366 (1 HSPs)
scaffold0366 (120-264)||(9300-9445)
[»] scaffold0102 (1 HSPs)
scaffold0102 (120-264)||(39143-39289)
[»] scaffold0049 (1 HSPs)
scaffold0049 (198-265)||(66885-66952)
[»] scaffold0217 (1 HSPs)
scaffold0217 (123-257)||(7316-7452)
[»] scaffold0160 (1 HSPs)
scaffold0160 (105-175)||(29233-29303)
[»] scaffold0020 (1 HSPs)
scaffold0020 (130-171)||(123146-123187)
[»] scaffold0157 (1 HSPs)
scaffold0157 (119-172)||(20272-20326)
[»] scaffold0004 (1 HSPs)
scaffold0004 (105-153)||(81548-81597)
[»] scaffold0079 (1 HSPs)
scaffold0079 (104-172)||(53077-53145)


Alignment Details
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 20 - 303
Target Start/End: Original strand, 39683438 - 39683721
Alignment:
Q  20 aatgacatcaacgacaatctttattatagaagaaagacagcgcaaaaatgttgagaggtgttgttttctttatatatttatattgagtgtgctcctctta 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  39683438 aatgacatcaacgacaatctttattatagaagaaagacagcgcaaaaatgttgagaggtgttgttttctttatatatttacattgagtgtgttcctctta 39683537  T
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacggtccc--cgcaagtgggcggtgga 217  Q
    ||||||||  ||||||||||||| ||||||||||||||||| ||||| ||||||||  ||||||||||||||||||| |||  |||||||||| ||||||    
T  39683538 aggtctcatgttcgattccctcttatgccaatttcgatgggaaagtctatacagagctttgttttggcctagaacgggcccctcgcaagtgggtggtgga 39683637  T
Q  218 attggtccccttgaattaatcgatcctttgatgggataccgaattttatnnnnnnnntgataataataaattgtgtgcataactcc 303  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  39683638 attggtcctcttgaattaatcgatccttagatgggataccgaattttat--aaaaaatgataataataaattgtgtgcataactcc 39683721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 20 - 256
Target Start/End: Complemental strand, 1372646 - 1372409
Alignment:
Q  20 aatgacatcaacgacaatctttattatagaagaaagacagcgcaaaaatgttgagaggtgttgttttctttatatatttatattgagtgtgctcctctta 119  Q
    |||||||  ||||||||||||||||||| || |||||||||  ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  1372646 aatgacaaaaacgacaatctttattataaaa-aaagacagccaaaaaatgctgagagatgttgttttctttgtatatttatattgagtgtgctcctctta 1372548  T
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacgg--tccccgcaagtgggcggtgga 217  Q
    ||||||||| ||||||||||||||||| |||||| ||||| || ||| ||||||||| ||| |||| | || |||||   |||||||||  ||||||||     
T  1372547 aggtctcaggttcgattccctctgatgtcaattttgatggacaggtctatacagagttttgctttgacttaaaacgggccccccgcaagcaggcggtggg 1372448  T
Q  218 attggtccccttgaattaatcgatcctttgatgggatac 256  Q
    |||| ||||||| ||||||| ||||||| ||| ||||||    
T  1372447 attgatcccctttaattaattgatccttggatcggatac 1372409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 104 - 264
Target Start/End: Original strand, 20305947 - 20306109
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccc 200  Q
    |||| ||||||||  |||||||||| ||||||||| |||| ||||||||||||||||| ||||||||||||||  ||| | |||| |  |||||   |||    
T  20305947 gagtttgctcctccaaaggtctcagtttcgattccttctggtgccaatttcgatgggctaagtccatacagagc-ttgctctggctttaaacgggacccc 20306045  T
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||||||| ||||||||||| |||||| ||||||||| ||| ||||||||| ||||    
T  20306046 cgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagtttt 20306109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 104 - 264
Target Start/End: Original strand, 21092580 - 21092742
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccc 200  Q
    |||| ||||||||  |||||||||| ||||||||| |||| ||||||||||||||||| ||||||||||||||  ||| | |||| |  |||||   |||    
T  21092580 gagtttgctcctccaaaggtctcagtttcgattccttctggtgccaatttcgatgggctaagtccatacagagc-ttgctctggctttaaacgggacccc 21092678  T
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||||||| ||||||||||| |||||| ||||||||| ||| ||||||||| ||||    
T  21092679 cgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagtttt 21092742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 104 - 245
Target Start/End: Complemental strand, 34639368 - 34639227
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacggtcc-ccg 202  Q
    |||||||||||||| ||||||||||  ||||| ||||||| ||||||||||| |||| ||||||||||||||  ||| | |||| |||||||| || | |    
T  34639368 gagtgtgctcctctcaaggtctcaggctcgat-ccctctggtgccaatttcggtgggtaagtccatacagagctttgctctggcttagaacgggcctctg 34639270  T
Q  203 caagtgggcggtggaattggtccccttgaattaatcgatcctt 245  Q
    ||||||| |||| | ||||||||| | |||||||||| |||||    
T  34639269 caagtggacggtaggattggtcccttcgaattaatcggtcctt 34639227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 4718700 - 4718846
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||||||||||||||||||    
T  4718700 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccccgcaagtgggcggtgg 4718798  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  4718799 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 4718846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 120 - 259
Target Start/End: Complemental strand, 15259552 - 15259411
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || ||||||||||||||||||     
T  15259552 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccccgcaagtgggcggtgt 15259454  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccga 259  Q
    |||||||||||| |||||| ||||| ||| ||| |||| ||||    
T  15259453 aattggtcccctcgaattagtcgattcttggatcggatgccga 15259411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 123 - 264
Target Start/End: Complemental strand, 8765669 - 8765526
Alignment:
Q  123 tctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtggaat 219  Q
    |||||| |||||||||||||| ||||||||||||||||| ||||||||||||||  ||| | |||| |  |||  ||  |||||||||||||||||| ||    
T  8765669 tctcaggttcgattccctctggtgccaatttcgatgggctaagtccatacagag-cttgctctggctttaaacggggctcccgcaagtgggcggtgggat 8765571  T
Q  220 tggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  8765570 tggtcccctcggattagtcgattcttggatcggataccgagtttt 8765526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 264
Target Start/End: Complemental strand, 3734785 - 3734623
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccc 200  Q
    |||| ||||||||  |||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||    
T  3734785 gagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccc 3734687  T
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||| ||||| |||| ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  3734686 cgcaaatgggcagtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 3734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 34237801 - 34237655
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || ||||||||||| |||||||    
T  34237801 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccccgcaagtgagcggtgg 34237703  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  34237702 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 34237655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 257
Target Start/End: Original strand, 14633009 - 14633148
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggtcc--ccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||| ||||||||  ||| | |||| | ||||||  |  || ||||||||||||||    
T  14633009 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtctatacagag-cttgctctggctttgaacggagcgtccacaagtgggcggtgg 14633107  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggatacc 257  Q
     ||||||||||||| |||| ||||| ||| ||| |||||||    
T  14633108 gattggtccccttggattagtcgattcttggatcggatacc 14633148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 21603285 - 21603432
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccccgcaagtgggcggtgg 216  Q
    ||||||||| ||||||||||| || ||||||||||| ||||| ||| ||||||||||  ||| | |||| |  |||||   |||||||||||||||||||    
T  21603285 aggtctcaggttcgattccctatggtgccaatttcggtgggctaagcccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 21603383  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
     ||||||||||| | |||| ||||| ||| ||| ||||||||| |||||    
T  21603384 gattggtcccctcggattagtcgattcttggatcggataccgagtttta 21603432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 257
Target Start/End: Original strand, 39349311 - 39349450
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||||||||||||||||||    
T  39349311 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccccgcaagtgggcggtgg 39349409  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggatacc 257  Q
     |||| |||||| | |||| ||||| ||| ||| |||||||    
T  39349410 gattgatcccctcggattagtcgattcttggatcggatacc 39349450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 265
Target Start/End: Complemental strand, 42643264 - 42643117
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    |||||||||||||||||||||||  ||||||||||| ||||| ||||||||||||||  ||| | || | |  |||  || |||||||||||||||||||    
T  42643264 aggtctcagattcgattccctctagtgccaatttcggtgggctaagtccatacagag-cttgctctgtcttgaaacgggggccccgcaagtgggcggtgg 42643166  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
     ||||||||||| | |||| | ||| ||| ||| ||||||||| |||||    
T  42643165 gattggtcccctcgcattagttgattcttggatcggataccgagtttta 42643117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 18128553 - 18128675
Alignment:
Q  105 agtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaac--ggtccccg 202  Q
    ||||||||||| | ||||||| ||||||||||| ||||| ||||||||||| ||||| | |||||| ||||  ||| | |||| |  |||  || |||||    
T  18128553 agtgtgctcctttcaaggtcttagattcgattctctctggtgccaatttcggtgggcgaatccataaagagctttgctctggctttaaacggggcccccg 18128652  T
Q  203 caagtgggcggtggaattggtcc 225  Q
    |||||||||||||| ||||||||    
T  18128653 caagtgggcggtgggattggtcc 18128675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 26169010 - 26168939
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    |||| ||||||||| |||||||||| || ||||||  ||||||||||||||| ||||||||| |||||||||    
T  26169010 gagtttgctcctctcaaggtctcaggtttgattcctcctgatgccaatttcggtgggcaagttcatacagag 26168939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 6953159 - 6953097
Alignment:
Q  114 ctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||| |||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  6953159 ctctaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag 6953097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 130 - 264
Target Start/End: Complemental strand, 34610823 - 34610687
Alignment:
Q  130 ttcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggtcccc--gcaagtgggcggtggaattggtccc 226  Q
    |||||||||||||||||||||||||| ||| | ||||| ||||||||  ||| | |||| |  ||||  ||||  ||||||||||||| |||||||||||    
T  34610823 ttcgattccctctgatgccaatttcggtggtctaagtctatacagagc-ttgctctggctttaaacgagcccctcgcaagtgggcggtagaattggtccc 34610725  T
Q  227 cttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    || |||||| ||||| ||| ||| ||||||||| ||||    
T  34610724 ctcgaattagtcgattcttggatcggataccgagtttt 34610687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 228
Target Start/End: Original strand, 13749094 - 13749221
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacggt---ccc 200  Q
    |||| ||||||||| ||||| |||| ||||||| |||  | ||||||||| | ||||||||| |||||| ||  ||| | |||| ||||||||    |||    
T  13749094 gagtctgctcctctcaaggtttcaggttcgatttccttcggtgccaattttggtgggcaagttcatacaaagctttgctctggcttagaacggggccccc 13749193  T
Q  201 cgcaagtgggcggtggaattggtcccct 228  Q
    ||||||||||| ||||||||||||||||    
T  13749194 cgcaagtgggcagtggaattggtcccct 13749221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 27746497 - 27746425
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||| ||||||||  |||||||||| ||||||||||| || ||||||||||| ||||| ||||||||||||||    
T  27746497 gagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagag 27746425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 32879334 - 32879480
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| |||| |||||||||  ||| | || | |  |||  || |||| ||||||||||||||    
T  32879334 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagag-cttgctctgacattaaacggggcccccacaagtgggcggtgg 32879432  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  32879433 gattggtcccctcggattagtcgattcttggattggataccgagtttt 32879480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 120 - 259
Target Start/End: Original strand, 28193529 - 28193670
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatggg-caagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||  ||||||||||||||  ||| | |||| |  |||  || |||  ||||||||||||||    
T  28193529 aggtctcaggttcgattccctctggtgccaatttcggtgggttaagtccatacagag-cttgctctggctttaaacggggcccctacaagtgggcggtgg 28193627  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccga 259  Q
     ||||||||||| | |||| ||||| ||| ||| |||||||||    
T  28193628 gattggtcccctcggattagtcgattcttggatcggataccga 28193670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 198 - 265
Target Start/End: Complemental strand, 43817815 - 43817748
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    ||||||||||||||||||||||||||| |||  ||||||||||| ||| ||| |||| ||||| ||||    
T  43817815 ccccgcaagtgggcggtggaattggtctcctcaaattaatcgattcttggatcggatgccgaacttta 43817748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 264
Target Start/End: Original strand, 2618251 - 2618387
Alignment:
Q  130 ttcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccccgcaagtgggcggtggaattggtccc 226  Q
    |||||||||||||| ||||||||||  ||||| ||||||||||||||  ||| | |||| |  |||||   ||||||||||||||||||| |||||||||    
T  2618251 ttcgattccctctggtgccaatttcagtgggctaagtccatacagagc-ttgctctggctttaaacggagcccccgcaagtgggcggtgggattggtccc 2618349  T
Q  227 cttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    || | |||| ||||| ||| ||| |||| |||| ||||    
T  2618350 ctcggattagtcgattcttggatcggattccgagtttt 2618387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 2639477 - 2639411
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||||||||||| ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  2639477 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 2639411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 19471745 - 19471811
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||||||| ||| ||||||||||| |||||| ||||| ||| ||| ||||||||| ||||    
T  19471745 ccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagtttt 19471811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 19542669 - 19542735
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||||||| ||| ||||||||||| |||||| ||||| ||| ||| ||||||||| ||||    
T  19542669 ccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagtttt 19542735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 19590027 - 19589961
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||||||| ||| ||||||||||| |||||| ||||| ||| ||| ||||||||| ||||    
T  19590027 ccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagtttt 19589961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 3403664 - 3403596
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccataca 172  Q
    |||| ||||| ||| ||||||| |  ||||||||| |||| ||||||||||| ||||||||||||||||    
T  3403664 gagtttgctcatctcaaggtcttatgttcgattccatctggtgccaatttcggtgggcaagtccataca 3403596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 265
Target Start/End: Original strand, 25248407 - 25248548
Alignment:
Q  123 tctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggtccc-cgcaagtgggcggtggaatt 220  Q
    |||||| |||||||||||||| || |||||||| | ||| ||||| ||||||||| ||| | |||| |  ||||| ||| |||||||||||||||| |||    
T  25248407 tctcaggttcgattccctctggtgtcaatttcggtaggctaagtc-atacagagt-ttgctctggctttaaacgggccctcgcaagtgggcggtgggatt 25248504  T
Q  221 ggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    |||||||| | |||| |||||  |||||| ||||||||| |||||    
T  25248505 ggtcccctcggattagtcgat-ttttgatcggataccgagtttta 25248548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 28964072 - 28964140
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatac 171  Q
    |||| ||||||||||||||| |||  ||||||||| |||| ||||||||||| ||||| ||||||||||    
T  28964072 gagtttgctcctcttaaggtttcatgttcgattccatctggtgccaatttcggtgggctaagtccatac 28964140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 34694738 - 34694670
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccataca 172  Q
    |||| ||||||||| ||||||| || ||||||||| |||| ||||||||||| ||||||| | ||||||    
T  34694738 gagtttgctcctctcaaggtcttaggttcgattccatctggtgccaatttcggtgggcaaattcataca 34694670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 517
Target Start/End: Original strand, 39683903 - 39683935
Alignment:
Q  485 tcagccattgtttataaaatataccgtcattgt 517  Q
    |||||||||||||||||||||||||||||||||    
T  39683903 tcagccattgtttataaaatataccgtcattgt 39683935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 41070800 - 41070868
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccataca 172  Q
    ||||||||| |||| |||||||||  ||||||||||| || || |||||||| ||||||||| ||||||    
T  41070800 gagtgtgctactctcaaggtctcaagttcgattccctttggtgtcaatttcggtgggcaagttcataca 41070868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 42328059 - 42328205
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    |||| |||| || ||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||| ||||||| || |||    
T  42328059 aggtgtcaggtttgattccctctgttgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccccacaagtggacgatgg 42328157  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| |||||| ||||| ||| ||| ||||||||| ||||    
T  42328158 gattggtcccctcgaattagtcgattcttggatcggataccgagtttt 42328205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 2166831 - 2166898
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    ||||||||||||||||||| |||||||||||   |||| |||||  |||||| ||||||||| |||||    
T  2166831 ccccgcaagtgggcggtgggattggtcccctcagattagtcgattttttgattggataccgagtttta 2166898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 172
Target Start/End: Original strand, 3794835 - 3794898
Alignment:
Q  109 tgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccataca 172  Q
    ||||||||| |||||||||  |||| ||||||||| |||||||||||  |||||||| ||||||    
T  3794835 tgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcgggcaagttcataca 3794898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 8387606 - 8387535
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    |||| |||| |||| | |||||||  ||||||| |||||| ||||||||| | |||||||||||||||||||    
T  8387606 gagtttgcttctctcagggtctcaagttcgatttcctctggtgccaattttggtgggcaagtccatacagag 8387535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 18532162 - 18532217
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacaga 174  Q
    ||||||||| |||||||||||| |||| |||||||| ||||| |||||||||||||    
T  18532162 aggtctcaggttcgattccctcagatgtcaatttcggtgggctaagtccatacaga 18532217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 24999287 - 24999330
Alignment:
Q  118 taaggtctcagattcgattccctctgatgccaatttcgatgggc 161  Q
    |||||||| || |||||||||||||||||||||||| |||||||    
T  24999287 taaggtcttaggttcgattccctctgatgccaattttgatgggc 24999330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 154
Target Start/End: Original strand, 10292110 - 10292144
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttc 154  Q
    ||||||||| |||||||||||||||||||||||||    
T  10292110 aggtctcaggttcgattccctctgatgccaatttc 10292144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 33747017 - 33747083
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||| ||||||||||||| | || | |||| ||||||||| ||| ||||||||| ||||    
T  33747017 ccccgcaagtggacggtggaattggttctctcggattagtcgatccttggatcggataccgagtttt 33747083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 36094729 - 36094791
Alignment:
Q  110 gctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccataca 172  Q
    |||||||| |||||||||| |||||||||||||| |  |||||||| | | ||||||||||||    
T  36094729 gctcctctcaaggtctcaggttcgattccctctggtatcaatttcggtagacaagtccataca 36094791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 36848911 - 36848838
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagt 176  Q
    |||| ||||||||| ||||| | |||||| ||| |||||| ||||||||||| ||||| |||||||||| ||||    
T  36848911 gagtttgctcctctcaaggttttagattccatttcctctggtgccaatttcggtgggctaagtccatacggagt 36848838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 20469972 - 20470028
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| |||||||||||||   |||||||| ||||||| ||||||||||||||    
T  20469972 aggtctcaggttcgattccctctagagccaatttagatgggctaagtccatacagag 20470028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 28088341 - 28088397
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatggg-caagtccatacagag 175  Q
    ||||||||||||||||||||| || || |||||||| ||||  ||||||||||||||    
T  28088341 aggtctcagattcgattccctttggtgtcaatttcggtgggttaagtccatacagag 28088397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 29855451 - 29855419
Alignment:
Q  105 agtgtgctcctcttaaggtctcagattcgattc 137  Q
    |||||||||||||||||||||||| ||||||||    
T  29855451 agtgtgctcctcttaaggtctcaggttcgattc 29855419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 3e-49; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 29 - 229
Target Start/End: Original strand, 38740810 - 38741012
Alignment:
Q  29 aacgacaatctttattatagaagaaagacagcgcaaaaatgttgagaggtgttgttttctttatatatttatattgagtgtgctcctcttaaggtctcag 128  Q
    |||||||||||||||||||||| |||||||||  ||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38740810 aacgacaatctttattatagaaaaaagacagcaaaaaaatgctgagagatgttgttttctttatatatttatattgactgtgctcctcttaaggtctcag 38740909  T
Q  129 attcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacggtc--cccgcaagtgggcggtggaattggtccc 226  Q
     |||||||||||||| || |||||||| ||| || ||| ||||||| | ||| |||| | || ||||| |  ||||||||  |||||||| |||||||||    
T  38740910 gttcgattccctctggtgtcaatttcggtggacaggtctatacagaattttgctttgacttaaaacggacctcccgcaagcaggcggtgggattggtccc 38741009  T
Q  227 ctt 229  Q
    |||    
T  38741010 ctt 38741012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 133 - 265
Target Start/End: Complemental strand, 47464240 - 47464107
Alignment:
Q  133 gattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacggt-ccccgcaagtgggcggtggaattggtccccttga 231  Q
    ||||||||||||||||||||| |  ||| ||||||||||||||| ||||| |||| |||| |||  |||||||||||| |||||||||||||| |||| |    
T  47464240 gattccctctgatgccaattttggagggtaagtccatacagagttttgttatggcttagagcggggccccgcaagtggacggtggaattggtctccttaa 47464141  T
Q  232 attaatcgatcctttgatgggataccgaatttta 265  Q
    |||| ||| |||||  ||  ||||||||||||||    
T  47464140 attagtcggtccttgaatcagataccgaatttta 47464107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 104 - 264
Target Start/End: Complemental strand, 40059014 - 40058852
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccc 200  Q
    |||| |||||||||  ||||||||| |||||||| ||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||    
T  40059014 gagtttgctcctctagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccc 40058916  T
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||||||| ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  40058915 cgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 40058852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 233
Target Start/End: Complemental strand, 22630332 - 22630220
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacggtccccgcaagtgggcggtggaat 219  Q
    ||||||||| |||||||||||||| ||||||||| | |||||||||||||||| ||| ||| |||||| ||||||   | |||||| |||||||||  ||    
T  22630332 aggtctcaggttcgattccctctggtgccaattttggtgggcaagtccatacaaagttttgctttggcttagaac-ccctccgcaaatgggcggtgagat 22630234  T
Q  220 tggtccccttgaat 233  Q
    ||||||||| ||||    
T  22630233 tggtcccctcgaat 22630220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 123 - 264
Target Start/End: Complemental strand, 45787847 - 45787704
Alignment:
Q  123 tctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtggaat 219  Q
    |||||| |||||||||||||||||||||||||  ||||| ||||||||||||||  ||| | |||| |  |||  || |||||||||||| |||||| ||    
T  45787847 tctcaggttcgattccctctgatgccaatttcagtgggctaagtccatacagagc-ttgctctggctttaaacagggcccccgcaagtggacggtgggat 45787749  T
Q  220 tggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||| |||||| ||||| ||| ||| ||||||||| ||||    
T  45787748 tggtcccctcgaattagtcgattcttggatcggataccgagtttt 45787704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 34844904 - 34844758
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||| ||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||||   |||||||||||||||||||    
T  34844904 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 34844806  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  34844805 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 34844758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 120 - 259
Target Start/End: Original strand, 52983670 - 52983811
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||  ||||| ||||||||||||||  ||| | |||| |  |||||   |||||||||||||||||||    
T  52983670 aggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 52983768  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccga 259  Q
     ||||||||||| | |||| ||||| ||| ||| |||||||||    
T  52983769 gattggtcccctcggattagtcgattcttggatcggataccga 52983811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 25852249 - 25852321
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||| ||||||||  |||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  25852249 gagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag 25852321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 27528941 - 27528795
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |   ||  || ||||||||||||||||||     
T  27528941 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttatacggggcccccgcaagtgggcggtga 27528843  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  27528842 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 27528795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 259
Target Start/End: Original strand, 12710214 - 12710369
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacggtccccgc 203  Q
    |||| |||| ||||||||||||||| ||||||||||| | ||| |||||||| ||| ||||||||||||| |  ||| | |||| |||||| |  |  ||    
T  12710214 gagtatgcttctcttaaggtctcaggttcgattccctttaatgtcaatttcggtggacaagtccatacagtgctttgctctggcttagaactgctctggc 12710313  T
Q  204 aagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccga 259  Q
    ||||| |||| || ||||||| |||   |||||||| ||||| ||| |||||||||    
T  12710314 aagtgagcggagggattggtcacctcagattaatcggtccttggatcggataccga 12710369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 19220568 - 19220639
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    |||||||||||||| ||||| |||| ||||||| |||||  |||||||||| |||||||||||||| |||||    
T  19220568 gagtgtgctcctctcaaggtttcaggttcgatttcctctagtgccaatttcaatgggcaagtccatgcagag 19220639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 51535756 - 51535818
Alignment:
Q  202 gcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||||||| ||||||||||| |||||| ||||| ||| ||| ||||||||||||||    
T  51535756 gcaagtgggcggtgggattggtcccctcgaattagtcgattcttagatcggataccgaatttt 51535818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 9646380 - 9646252
Alignment:
Q  102 ttgagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaac--ggtcc 199  Q
    |||||||||||||| | |||||||||  || ||||| |||||||| ||||||| |||||||||| ||||||| |  ||| | |||| ||||||  || |     
T  9646380 ttgagtgtgctcctgtcaaggtctcatgtttgattctctctgatgacaatttcaatgggcaagttcatacagtgctttgctctggcttagaaccgggcca 9646281  T
Q  200 ccgcaagtgggcggtggaattggtcccct 228  Q
    |||||||||||| |||| |||| ||||||    
T  9646280 ccgcaagtgggcagtgggattgatcccct 9646252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 7392125 - 7392053
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagt 176  Q
    |||| ||||||||  |||||||||| ||||||||||| || ||||||||||| |||  |||||||||||||||    
T  7392125 gagtttgctcctccaaaggtctcaggttcgattccctatggtgccaatttcggtggttaagtccatacagagt 7392053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 34835564 - 34835632
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatac 171  Q
    |||| |||||||||||||||||||  |||||||||||||| || |||||||| ||||| ||||||||||    
T  34835564 gagtttgctcctcttaaggtctcatgttcgattccctctggtgtcaatttcggtgggctaagtccatac 34835632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 35229299 - 35229366
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    |||| |||||| ||||||| ||||||||||| |||||| ||||| ||| ||| |||||||||||||||    
T  35229299 ccccacaagtgagcggtgggattggtcccctcgaattagtcgattcttggatcggataccgaatttta 35229366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 52494623 - 52494686
Alignment:
Q  202 gcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    ||||||||||||||| ||||||||||| |||||| ||||| ||| ||| ||||||||| |||||    
T  52494623 gcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttta 52494686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 10143788 - 10143838
Alignment:
Q  195 ggtccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctt 245  Q
    ||||||||||||||| |||||| ||||||||||| |||||||| |||||||    
T  10143788 ggtccccgcaagtggacggtgggattggtcccctcgaattaattgatcctt 10143838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 1985887 - 1985944
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagt 176  Q
    ||||||||| ||||||||||| || ||| ||||||||||||| |||||||||||||||    
T  1985887 aggtctcaggttcgattccctttggtgcgaatttcgatgggctaagtccatacagagt 1985944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 18875659 - 18875606
Alignment:
Q  123 tctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||||| ||||||||||||||||| |||||||| ||||| ||||||||||||||    
T  18875659 tctcaggttcgattccctctgatgtcaatttcggtgggctaagtccatacagag 18875606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 44343646 - 44343711
Alignment:
Q  199 cccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||||||||| ||||||||||| |||||| ||||| |||  || ||||||||| ||||    
T  44343646 cccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttgaatcggataccgagtttt 44343711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 19660678 - 19660532
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| || ||||| ||||||||| ||||||| ||||  ||||||||||||||  ||| | |||| |  |||  || |||||||||||||||||||    
T  19660678 aggtctcaggtttgattctctctgatgcaaatttcggtgggataagtccatacagagc-ttgctctggctttaaacagggcccccgcaagtgggcggtgg 19660580  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     |||| |||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  19660579 gattgatcccctcggattagtcgattcttggatcggataccgagtttt 19660532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 265
Target Start/End: Original strand, 20566406 - 20566548
Alignment:
Q  125 tcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacg--gtccccgcaagtgggcggtggaattg 221  Q
    |||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  ||||  | ||||||||||||||| ||| ||||    
T  20566406 tcaggttcgattccctctggtgccaatttcggtgggcaaagtccatacagag-cttgctctggctttaaacggagcccccgcaagtgggcgctgggattg 20566504  T
Q  222 gtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    |||||||   |||| ||||| ||| ||| ||||| ||| |||||    
T  20566505 gtcccctcagattagtcgattcttggatcggatatcgagtttta 20566548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 22625216 - 22625160
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| ||||||||||||||  |||||||||| ||||| ||||||||||||||    
T  22625216 aggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagag 22625160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 32986248 - 32986394
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccccgcaagtgggcggtgg 216  Q
    ||||||||| ||| |||||||||| ||||||||||| ||||| ||||||||||||||  ||| | || | |  || ||   |||||||||||||||||||    
T  32986248 aggtctcaggttcaattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctgactttaaatggggcccccgcaagtgggcggtgg 32986346  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | | || ||||| ||| ||| ||||||||| ||||    
T  32986347 gattggtcccctcggaatagtcgattcttggatcggataccgagtttt 32986394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 33696425 - 33696369
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| ||| |||||||||| ||||||||||| ||||| ||||||||||||||    
T  33696425 aggtctcaggttcaattccctctggtgccaatttcggtgggctaagtccatacagag 33696369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 264
Target Start/End: Original strand, 34723854 - 34723996
Alignment:
Q  124 ctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtggaatt 220  Q
    ||||| |||||||||||||| ||||||||||| ||||| ||||||||||| ||  ||| | |||| |  |||  || ||||||||||||| ||||| |||    
T  34723854 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacaaag-cttgctctggctttaaacggggcccccgcaagtgggtggtgggatt 34723952  T
Q  221 ggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||| || | |||| ||||| ||| ||| ||||||||| ||||    
T  34723953 ggtcctctcggattagtcgattcttggatcggataccgagtttt 34723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 228
Target Start/End: Complemental strand, 54127504 - 54127378
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccc 200  Q
    |||| ||||||||  |||||||||| ||| |||||||||  ||||||||||| ||||| ||||| ||||||||  ||| | |||| |  |||  || |||    
T  54127504 gagtttgctcctccaaaggtctcaggttcaattccctcttgtgccaatttcggtgggctaagtctatacagag-cttgctctggctttaaacggggcccc 54127406  T
Q  201 cgcaagtgggcggtggaattggtcccct 228  Q
    |||||||||||||||| |||||||||||    
T  54127405 cgcaagtgggcggtgggattggtcccct 54127378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 5609347 - 5609292
Alignment:
Q  121 ggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||||||| |||||||| ||||| ||||||||||| ||||| ||||||||||||||    
T  5609347 ggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagag 5609292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 13771640 - 13771577
Alignment:
Q  109 tgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatac 171  Q
    ||||| ||| ||||||||| |||||||||||||||||| |||| ||| ||||| ||||||||||    
T  13771640 tgctcatctcaaggtctcaaattcgattccctctgatgtcaatctcggtgggctaagtccatac 13771577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 41621758 - 41621687
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    |||| ||||||||| |||||||||  || |||| |||||| ||||||||| | ||||||| |||||||||||    
T  41621758 gagtttgctcctctcaaggtctcatgtttgatttcctctggtgccaattttggtgggcaaatccatacagag 41621687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 12500205 - 12500151
Alignment:
Q  119 aaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccataca 172  Q
    |||||||||| || ||||||||||| |||||||||| |||||| |||||||||||    
T  12500205 aaggtctcaggtttgattccctctggtgccaatttcaatgggctaagtccataca 12500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 13873442 - 13873384
Alignment:
Q  119 aaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagt 176  Q
    |||||||||| |||||||||||||| ||||||||||| | ||| |||| ||||||||||    
T  13873442 aaggtctcaggttcgattccctctggtgccaatttcggtaggctaagttcatacagagt 13873384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 32942431 - 32942477
Alignment:
Q  130 ttcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||||||| ||||||||||||||||| ||||| ||||||||||||||    
T  32942431 ttcgattctctctgatgccaatttcggtgggctaagtccatacagag 32942477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 38869810 - 38869860
Alignment:
Q  104 gagtgtgctcctctt-aaggtctcagattcgattccctctgatgccaattt 153  Q
    ||||||||||||| | |||||||||| |||||||||||||| |||||||||    
T  38869810 gagtgtgctcctcctcaaggtctcaggttcgattccctctggtgccaattt 38869860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 51961993 - 51962035
Alignment:
Q  200 ccgcaagtgggcggtggaattggtccccttgaattaatcgatc 242  Q
    |||||||||| |||||| ||||||||||| |||||||||||||    
T  51961993 ccgcaagtggacggtgggattggtcccctcgaattaatcgatc 51962035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 23131497 - 23131436
Alignment:
Q  203 caagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||| | ||||||||||| |||||| ||||| ||| ||| ||||||||| ||||    
T  23131497 caagtgggcggtaggattggtcccctcgaattagtcgattcttcgatcggataccgagtttt 23131436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 25969664 - 25969592
Alignment:
Q  104 gagtgtgctcctcttaaggtctcaga--ttcgattccctctgatgccaatttcgatgggcaagtccatacaga 174  Q
    |||| ||||||||| |||||| ||||  || ||||||| ||| ||||||||||| ||| ||||||||||||||    
T  25969664 gagtttgctcctctcaaggtcccagaggttggattccccctggtgccaatttcggtggccaagtccatacaga 25969592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 35674888 - 35674831
Alignment:
Q  119 aaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||||| ||| ||||||||||||||  |||||||||| ||||| ||||||||||||||    
T  35674888 aaggtcacaggttcgattccctctggagccaatttcggtgggctaagtccatacagag 35674831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 39288924 - 39288965
Alignment:
Q  134 attccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    |||||| |||||| |||||||| |||||||||||||||||||    
T  39288924 attcccactgatgtcaatttcggtgggcaagtccatacagag 39288965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 49287909 - 49287962
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccataca 172  Q
    ||||||||| |||||||| ||||| ||||||||||| ||||| |||||||||||    
T  49287909 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccataca 49287962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 13584416 - 13584344
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||| ||||||||  || ||||||  |||||||||||||| || |||||||||||||| ||||||||| ||||    
T  13584416 gagtttgctcctccaaaagtctcaagttcgattccctctggtgtcaatttcgatgggctaagtccatagagag 13584344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 16339783 - 16339715
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccataca 172  Q
    |||||||||||||| || |  || ||||| ||| |||||| | ||||||||||||| ||||||||||||    
T  16339783 gagtgtgctcctctcaaaggttcggattcaatttcctctggtaccaatttcgatggacaagtccataca 16339715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 20078130 - 20078074
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| || ||||||| ||| ||||||||||| ||||| ||||||||||||||    
T  20078130 aggtctcaggtttgattcccactggtgccaatttcggtgggctaagtccatacagag 20078074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 51595152 - 51595220
Alignment:
Q  197 tccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    ||||||||||||| ||||||||||| || | | | |||||||||| ||| ||| ||||||||| |||||    
T  51595152 tccccgcaagtggacggtggaattgatctcttcggattaatcgattcttggatcggataccgagtttta 51595220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 4e-33; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 72 - 229
Target Start/End: Original strand, 31766694 - 31766853
Alignment:
Q  72 gagaggtgttgttttctttatatatttatattgagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatac 171  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||| ||| ||  || ||||    
T  31766694 gagagatgttgttttctttatatatttatattgagtgtgctcctcttaaggtctcaggttcgatttcctctgatgtcaatttcggtggacagatctatac 31766793  T
Q  172 agagtgttgttttggcctagaac--ggtccccgcaagtgggcggtggaattggtcccctt 229  Q
    ||||| ||| |||| | || |||  || ||| |||||  |||||||| ||||||||||||    
T  31766794 agagttttgctttgacttaaaacgaggcccctgcaagcaggcggtgggattggtcccctt 31766853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 104 - 264
Target Start/End: Complemental strand, 40133611 - 40133449
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccc 200  Q
    |||| ||||||||  |||||||||| |||||||||||||| || |||||||| ||||| ||||||||||||||  ||| | |||| |  |||||   |||    
T  40133611 gagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccc 40133513  T
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||||||| ||||||||||| |||||| ||||| ||| ||| ||||||||| ||||    
T  40133512 cgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 40133449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 104 - 264
Target Start/End: Original strand, 30257659 - 30257821
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccc 200  Q
    |||| ||||||||  |||||||||| ||||||||||| || ||||||||||||||| | ||||||||||||||  ||| | |||| |  || ||   |||    
T  30257659 gagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcgatggactaagtccatacagagc-ttgctctggctttaaatggggcccc 30257757  T
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||||||| ||||||||||| | |||| ||||| ||| ||| ||||||||||||||    
T  30257758 cgcaagtgggcggtggcattggtcccctcggattagtcgattcttggatcggataccgaatttt 30257821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 105 - 175
Target Start/End: Original strand, 50162079 - 50162149
Alignment:
Q  105 agtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    |||| |||||||| ||||||||||||||||||||||||  ||||||||| |||| ||||||||||||||||    
T  50162079 agtgcgctcctctcaaggtctcagattcgattccctctattgccaattttgatgtgcaagtccatacagag 50162149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 53424322 - 53424177
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac-ggtccccgcaagtgggcggtgga 217  Q
    ||||||||| ||||||||||| || ||||||||||| ||||| ||||||||||||||| ||| | |||| |  ||| || ||||||||||| |||||||     
T  53424322 aggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagt-ttgctatggctttaaacgggcccccgcaagtgagcggtggg 53424224  T
Q  218 attggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  53424223 attggtcccctcggattagtcgattcttggatcggataccgagtttt 53424177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 35492962 - 35493109
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||||||||||||||||||    
T  35492962 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccccgcaagtgggcggtgg 35493060  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
     ||||||||||| | |||| ||||| ||| ||| | ||||||| |||||    
T  35493061 gattggtcccctcggattagtcgattcttggattgaataccgagtttta 35493109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 45529900 - 45529755
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacgg--tccccgcaagtgggcggtgg 216  Q
    ||||||||| ||||||||||||||  |||||||||||||||| ||||||||||||||  ||| | |||| |  |||||   |||||||||||||||||||    
T  45529900 aggtctcaggttcgattccctctggagccaatttcgatgggctaagtccatacagag-cttgctctggctttaaacgggccccccgcaagtgggcggtgg 45529802  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| ||||| | ||||| ||||||||| ||||    
T  45529801 gattggtcccctcggattagtcgattc-ttgatcggataccgagtttt 45529755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 46576399 - 46576545
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||  ||||| ||||||||||||||  ||| | |||| |  |||||   ||||||||||||||||| |    
T  46576399 aggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtcg 46576497  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||||| |||| ||||| ||| ||| ||||||||| ||||    
T  46576498 gattggtccccttggattagtcgattcttggatcggataccgagtttt 46576545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 120 - 265
Target Start/End: Complemental strand, 52821781 - 52821635
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac-ggtccccgcaagtgggcggtgga 217  Q
    ||||||||| |||||||||||||| ||||||||||| || || ||||||||||||||  ||| | |||| |  ||| || ||||| |||||||||||||     
T  52821781 aggtctcaggttcgattccctctggtgccaatttcggtgagctaagtccatacagag-cttgctctggctttaaacggggccccgtaagtgggcggtggg 52821683  T
Q  218 attggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    ||||||||||| | |||| ||||| ||| ||| ||||||||| |||||    
T  52821682 attggtcccctcggattagtcgattcttggatcggataccgagtttta 52821635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 15566645 - 15566500
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac-ggtccccgcaagtgggcggtgga 217  Q
    ||||||||| |||||||||||||  ||||||||||| ||||| ||||||||||||||  ||| | |||| |  ||| || |||||||||||||||||||     
T  15566645 aggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacgggcccccgcaagtgggcggtggg 15566547  T
Q  218 attggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||   |||| ||||| ||| ||| ||||||||| ||||    
T  15566546 attggtcccctcagattagtcgattcttggatcggataccgagtttt 15566500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 265
Target Start/End: Original strand, 26158853 - 26159009
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacg--gtcccc 201  Q
    |||||||||||||| |||||||||| ||  ||||||| || ||||||||||| |||| |||||||||||       | | |||| |||||||  | ||||    
T  26158853 gagtgtgctcctctcaaggtctcaggtttcattccctttggtgccaatttcggtgggtaagtccataca-------gctctggcttagaacggagccccc 26158945  T
Q  202 gcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    ||||||||||||||| |||| |||||| | |||| ||| ||||| ||| |||||||||| ||||    
T  26158946 gcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggataccgaaattta 26159009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 21362994 - 21363141
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| || |||||||| | ||| ||||||||||||||  ||| | |||| |  |||||   |||||||||||||||||||    
T  21362994 aggtctcaggttcgattccctctggtgtcaatttcggtaggctaagtccatacagagc-ttgctctggctttaaacggagcccccgcaagtgggcggtgg 21363092  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
     |||||| |||| | |||||||||| ||| ||| ||||||||| |||||    
T  21363093 gattggttccctcggattaatcgattcttggatcggataccgagtttta 21363141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 265
Target Start/End: Complemental strand, 49258408 - 49258261
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||  ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||| ||||||||||||||    
T  49258408 aggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccccacaagtgggcggtgg 49258310  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
     ||||||||||| | |||| ||||| ||| ||| ||||||||| |||||    
T  49258309 gattggtcccctcggattagtcgattcttggatcggataccgagtttta 49258261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 8456296 - 8456150
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||||||||||||| ||||    
T  8456296 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccccgcaagtgggcagtgg 8456198  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| ||||| |||  || ||||||||| ||||    
T  8456197 gattggtcccctcggattagtcgattcttgaatcggataccgagtttt 8456150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 25289860 - 25289715
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||  ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||||||||||||||||||    
T  25289860 aggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccccgcaagtgggcggtgg 25289762  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     |||||| |||| |||||| ||||| ||| ||| ||||||||| ||||    
T  25289761 gattggt-ccctcgaattagtcgattcttggatcggataccgagtttt 25289715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 264
Target Start/End: Original strand, 48977423 - 48977585
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatggg-caagtccatacagagtgttgttttggcctagaac--ggtccc 200  Q
    |||| ||||||||  |||||||||| ||||||||| |||| ||||||||||| ||||  ||||||||||||||  ||| | |||| |  |||  || |||    
T  48977423 gagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggttaagtccatacagag-cttgctctggctttaaacggggcccc 48977521  T
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||||||| ||||||||||| | |||| ||| ||||| ||| ||||||||| ||||    
T  48977522 tgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 48977585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 50583027 - 50583095
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccataca 172  Q
    |||| ||||||||||||||| |||| ||||||| |||||| ||||||||||| |||| |||||||||||    
T  50583027 gagtttgctcctcttaaggtttcaggttcgatttcctctgttgccaatttcgttgggtaagtccataca 50583095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 256
Target Start/End: Complemental strand, 4252558 - 4252404
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacgg--tcccc 201  Q
    |||||||||||||| |||||||||  || ||||||||||| ||||||||||  ||  |||||||||||| ||  ||  | |||  ||||||||   ||||    
T  4252558 gagtgtgctcctctcaaggtctcaagtttgattccctctggtgccaatttcagtgatcaagtccatacaaagctttactctggtttagaacggccccccc 4252459  T
Q  202 gcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggatac 256  Q
     ||||||| |||||| ||||||||||| | |||| ||||||||| ||| ||||||    
T  4252458 acaagtggacggtgggattggtcccctcggattagtcgatccttggatcggatac 4252404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 265
Target Start/End: Complemental strand, 33398534 - 33398467
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    ||||||||||||||||||| |||||| |||| |||||| ||||| ||| ||| |||||||||||||||    
T  33398534 ccccgcaagtgggcggtgggattggttccctcgaattagtcgattcttggatcggataccgaatttta 33398467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 7485687 - 7485630
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc 161  Q
    |||| ||||||||  |||||||||| |||||||||||||||||||||||||| |||||    
T  7485687 gagtttgctcctccaaaggtctcaggttcgattccctctgatgccaatttcggtgggc 7485630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 230
Target Start/End: Original strand, 1242036 - 1242136
Alignment:
Q  132 cgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggtc-cccgcaagtgggcggtggaattggtcccctt 229  Q
    |||||||||||| ||||||||| | ||||| ||||||||||||||  ||| | |||| |  |||||   |||||||||||||||||||||||||||||||    
T  1242036 cgattccctctggtgccaattttggtgggctaagtccatacagagctttgctctggctttaaacggggtcccgcaagtgggcggtggaattggtcccctt 1242135  T
Q  230 g 230  Q
    |    
T  1242136 g 1242136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 7470377 - 7470305
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||| ||||||||  |||||||||| ||||||||||||| |||||||||||| ||||| |||| |||||||||    
T  7470377 gagtttgctcctccaaaggtctcaggttcgattccctctaatgccaatttcggtgggctaagttcatacagag 7470305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 264
Target Start/End: Complemental strand, 8097421 - 8097279
Alignment:
Q  124 ctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccccgcaagtgggcggtggaatt 220  Q
    ||||| |||||||||||||  ||| ||||||||||||| ||||||||||||||  | | | |||| |  |||||   ||||||||||||||||||| |||    
T  8097421 ctcaggttcgattccctcttgtgctaatttcgatgggctaagtccatacagagcat-gctctggctttaaacggggcccccgcaagtgggcggtgggatt 8097323  T
Q  221 ggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  8097322 ggtcccctcggattagtcgattcttggatcggataccgagtttt 8097279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 26108343 - 26108399
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  26108343 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag 26108399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 26174164 - 26174310
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| ||||||| |||||| ||||||||||| ||||  ||||||||||||||  ||| | |||| |  ||   || |||||||||||||||||||    
T  26174164 aggtctcaggttcgatttcctctggtgccaatttcggtgggttaagtccatacagagc-ttgctctggctttaaatagggcccccgcaagtgggcggtgg 26174262  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  26174263 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 26174310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 30807299 - 30807243
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  30807299 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag 30807243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 122 - 264
Target Start/End: Complemental strand, 53234054 - 53233911
Alignment:
Q  122 gtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggc-ctagaacggt--ccccgcaagtgggcggtgga 217  Q
    ||||||| |||||||| ||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| ||| |||||   |||||||||||||||||||     
T  53234054 gtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctcta-aacggggcccccgcaagtgggcggtggg 53233957  T
Q  218 attggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||| | |||| ||||| | ||||| ||||||||| ||||    
T  53233956 attggtcccctcggattagtcgattc-ttgatcggataccgagtttt 53233911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 32151555 - 32151621
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||||||||||  ||||||||||| |||||| ||||| ||| ||| ||||||||| ||||    
T  32151555 ccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagtttt 32151621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 45272560 - 45272452
Alignment:
Q  122 gtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtggaa 218  Q
    ||||||| |||||||||||||| ||||||||||| ||||| |||||||||| |||  ||| | |||| |  |||  || ||||||||||||||||||| |    
T  45272560 gtctcagtttcgattccctctggtgccaatttcggtgggctaagtccatacggag-cttgctctggctttaaacggggcccccgcaagtgggcggtggga 45272462  T
Q  219 ttggtcccct 228  Q
    ||||||||||    
T  45272461 ttggtcccct 45272452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 53848500 - 53848434
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||||||||||| ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  53848500 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 53848434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 120 - 265
Target Start/End: Complemental strand, 18177033 - 18176886
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    |||| |||| |||||||||||||| ||||||||||| ||| | ||||||||||||||  ||| | |||| |  |||  || |||||||||||||||||||    
T  18177033 aggtatcaggttcgattccctctggtgccaatttcggtggactaagtccatacagag-cttgctctggctttaaacggggcccccgcaagtgggcggtgg 18176935  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
     ||||||||| | | |||| ||||| ||| ||| |||||| || |||||    
T  18176934 gattggtcccatcggattagtcgattcttggatcggatacagagtttta 18176886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 120 - 225
Target Start/End: Complemental strand, 34492721 - 34492614
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||  |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||||||||||||||||||    
T  34492721 aggtctcatgttcgattccctctgctgccaatttcgttgggctaagtccatacagag-cttgctctggctttaaacggggcccccgcaagtgggcggtgg 34492623  T
Q  217 aattggtcc 225  Q
     ||||||||    
T  34492622 gattggtcc 34492614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 200 - 265
Target Start/End: Original strand, 54475814 - 54475879
Alignment:
Q  200 ccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    ||||||||||||||||| ||||||||||||| |||| ||||| ||| |||  |||||||| |||||    
T  54475814 ccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccgagtttta 54475879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 2511443 - 2511387
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| |||| |||||||||    
T  2511443 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagag 2511387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 264
Target Start/End: Complemental strand, 10190884 - 10190742
Alignment:
Q  124 ctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccccgcaagtgggcggtggaatt 220  Q
    ||||| || ||||||||||  ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||||   |||||||||||| |||||| |||    
T  10190884 ctcaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtggacggtgggatt 10190786  T
Q  221 ggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  10190785 ggtcccctcggattagtcgattcttggatcggataccgagtttt 10190742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 24407395 - 24407459
Alignment:
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    |||||||||||||||| ||||||||||| | |||| ||||| ||| ||| ||||||||| |||||    
T  24407395 cgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttta 24407459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 39253739 - 39253787
Alignment:
Q  104 gagtgtgctcctctt-aaggtctcagattcgattccctctgatgccaat 151  Q
    ||||||||||||||| |||||||||| |||||||| |||||||||||||    
T  39253739 gagtgtgctcctcttcaaggtctcaggttcgattctctctgatgccaat 39253787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 40268531 - 40268587
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatggg 160  Q
    ||||| ||||||||||||||||||| |||||||| | | ||||||||||||| ||||    
T  40268531 gagtgggctcctcttaaggtctcaggttcgattctccccgatgccaatttcggtggg 40268587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 40940876 - 40940932
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| |||||||||||||| ||||||||||| ||| | ||||||||||||||    
T  40940876 aggtctcaggttcgattccctctggtgccaatttcggtggactaagtccatacagag 40940932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 34844413 - 34844484
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    |||||||||||||| |||||||||| ||||||||||||    |||||||||| ||| | ||| |||||||||    
T  34844413 gagtgtgctcctctcaaggtctcaggttcgattccctccagagccaatttcggtggactagtacatacagag 34844484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 256
Target Start/End: Complemental strand, 55371357 - 55371302
Alignment:
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggatac 256  Q
    |||||||||||||||| ||||||||||| | |||| ||||||||| ||| ||||||    
T  55371357 cgcaagtgggcggtgggattggtcccctcggattagtcgatccttggatcggatac 55371302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 8958101 - 8958035
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||||||||||| |||||||||||   |||||||||| ||| |||  |||||||| ||||    
T  8958101 ccccgcaagtgggcggtgggattggtcccctctgattaatcgattcttggatcagataccgagtttt 8958035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 24165781 - 24165715
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||||||||||| |||| |||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  24165781 ccccgcaagtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgagtttt 24165715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 203 - 265
Target Start/End: Complemental strand, 50731298 - 50731236
Alignment:
Q  203 caagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    |||||||||||||| |||||||||||   |||| ||||||||| ||| ||||||||| |||||    
T  50731298 caagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttta 50731236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 203 - 265
Target Start/End: Original strand, 50781556 - 50781618
Alignment:
Q  203 caagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    |||||||||||||| |||||||||||   |||| ||||||||| ||| ||||||||| |||||    
T  50781556 caagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttta 50781618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 1178228 - 1178277
Alignment:
Q  125 tcagattcgattccctctgatgccaatttcgatgggcaagtccatacaga 174  Q
    |||| |||||||| | ||| ||||||||||| ||||||||||||||||||    
T  1178228 tcaggttcgattctccctggtgccaatttcggtgggcaagtccatacaga 1178277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 14343432 - 14343379
Alignment:
Q  122 gtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacaga 174  Q
    ||||||||||||||| | ||||| ||||||||| |||||| |||||||||||||    
T  14343432 gtctcagattcgatttcatctgacgccaatttcaatgggctaagtccatacaga 14343379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 228
Target Start/End: Original strand, 19857179 - 19857212
Alignment:
Q  195 ggtccccgcaagtgggcggtggaattggtcccct 228  Q
    |||| |||||||||||||||||||||||||||||    
T  19857179 ggtctccgcaagtgggcggtggaattggtcccct 19857212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 40777055 - 40777112
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc 161  Q
    |||||||||||||| |||||||||| || ||||| ||||  ||||||||||| |||||    
T  40777055 gagtgtgctcctctcaaggtctcaggtttgattctctctagtgccaatttcggtgggc 40777112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 48972854 - 48972817
Alignment:
Q  123 tctcagattcgattccctctgatgccaatttcgatggg 160  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  48972854 tctcaggttcgattccctctggtgccaatttcgatggg 48972817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 51532839 - 51532896
Alignment:
Q  119 aaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||||||||  |||||||| |||| |||||||||||| ||||| ||||||||||||||    
T  51532839 aaggtctcatgttcgattctctctaatgccaatttcggtgggctaagtccatacagag 51532896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 52455795 - 52455754
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc 161  Q
    ||||||||| |||||||||||||| ||||||||| |||||||    
T  52455795 aggtctcaggttcgattccctctggtgccaattttgatgggc 52455754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 53288874 - 53288805
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccataca 172  Q
    |||| ||||||||  ||||||||||  ||||||||||||| ||||||||||| ||| | |||||||||||    
T  53288874 gagtttgctcctccaaaggtctcaggctcgattccctctggtgccaatttcggtggactaagtccataca 53288805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 53863901 - 53863845
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatggg 160  Q
    |||||||||||||| ||||||| || ||| |||| ||||| ||||||||||| ||||    
T  53863901 gagtgtgctcctctcaaggtcttaggttcaattctctctggtgccaatttcgttggg 53863845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 3e-31; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 104 - 264
Target Start/End: Complemental strand, 8192513 - 8192352
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacggtccc-cg 202  Q
    |||||||||||||| |||||||||| |||||||||||||| ||||||| ||| |||||||||||||| ||||  ||| | |||| |||||||| ||| ||    
T  8192513 gagtgtgctcctctcaaggtctcaggttcgattccctctggtgccaatgtcggtgggcaagtccatatagagctttgctctggcttagaacggcccctcg 8192414  T
Q  203 caagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||||| ||||| ||||| | |||| ||| ||||| ||| ||||||||| ||||    
T  8192413 caagtgggcggtgggattgggcccctcggattagtcggtccttggatcggataccgagtttt 8192352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 118 - 265
Target Start/End: Original strand, 19174812 - 19174960
Alignment:
Q  118 taaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacggt-ccccgcaagtgggcggtgg 216  Q
    |||| |||||| ||||||||| |||| ||||||||||| |||| | ||||||||||||  ||| | |||| ||||||||  ||||| || ||||||||||    
T  19174812 taagttctcaggttcgattccttctggtgccaatttcggtgggtaggtccatacagagctttgctctggcttagaacggagccccgtaaatgggcggtgg 19174911  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
     |||| |||||| | |||||||| ||||| ||| |||||||||||||||    
T  19174912 gattgatcccctcggattaatcggtccttggatcggataccgaatttta 19174960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 28194295 - 28194224
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    |||||||||||||||||||||| || |||||||| ||||| ||||||||||| |||||||||||||||||||    
T  28194295 gagtgtgctcctcttaaggtcttaggttcgattctctctggtgccaatttcggtgggcaagtccatacagag 28194224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 104 - 264
Target Start/End: Original strand, 15037994 - 15038156
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacg--gtccc 200  Q
    |||| ||||||||  |||||||||| ||||||||||| || ||||||||||| ||||| ||||||||||||||  ||| |||||| |  ||||  | |||    
T  15037994 gagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagag-cttgctttggctttaaacggagcccc 15038092  T
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||||||| |||||||||||   |||| ||||| ||| ||| ||||||||| ||||    
T  15038093 cgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagtttt 15038156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 19606007 - 19605935
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagt 176  Q
    ||||| |||||||| |||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  19606007 gagtgcgctcctctcaaggtctcaggttcgattccctctaatgctaatttcggtgggcaagtccatacagagt 19605935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 33827719 - 33827573
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacgg--tccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||||   ||| |||||||||||||||    
T  33827719 aggtctcaggttcgattccctctggtgccaatttcgttgggctaagtccatacagag-cttgctctggctttaaacgggacccctgcaagtgggcggtgg 33827621  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||||| |||| ||||| ||| ||| ||||||||| ||||    
T  33827620 gattggtccccttggattagtcgattcttggatcggataccgagtttt 33827573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 24196055 - 24196199
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggtccccgcaagtgggcggtggaa 218  Q
    |||| |||| |||||||||||||| ||| ||||||| ||||| |||||||||||||   ||| | |||| |  ||||| ||||||||||||||||||| |    
T  24196055 aggtttcaggttcgattccctctggtgcaaatttcggtgggctaagtccatacagaac-ttgctctggctttaaacgggccccgcaagtgggcggtggga 24196153  T
Q  219 ttggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||| | |||| |||||  |||||| ||||||||| ||||    
T  24196154 ttggtcccctcggattagtcgattttttgattggataccgagtttt 24196199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 18976523 - 18976455
Alignment:
Q  196 gtccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||||| ||| ||| ||||||||||||||    
T  18976523 gtccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgaatttt 18976455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 36242458 - 36242312
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacgg--tccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| || |||||||| ||||| |||||||  |||||  ||| | |||| |  |||||  ||||||||||||||||||||    
T  36242458 aggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccagccagagc-ttgctctggctttaaacggggtccccgcaagtgggcggtgg 36242360  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||||||||| ||| ||| ||||||| ||||||    
T  36242359 gattggtcccctcggattaatcgattcttggatcggataccaaatttt 36242312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 5394052 - 5394125
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagt 176  Q
    |||| ||||||||  |||||||||| |||||||||||||| || |||||||||||||| |||||||||||||||    
T  5394052 gagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcgatgggctaagtccatacagagt 5394125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 44946199 - 44946053
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggtcccc--gcaagtgggcggtgg 216  Q
    ||||||||| ||||||||||| || ||||||||||| ||||| |||||||||||||   ||| | |||| |  ||||| ||||  |||||||||||||||    
T  44946199 aggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagaac-ttgctctggctttaaacgggccccccgcaagtgggcggtgg 44946101  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  44946100 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 44946053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 265
Target Start/End: Complemental strand, 44929912 - 44929845
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    |||||||||||| |||||| |||||||||||||||||| ||||| ||| ||| ||||||||| |||||    
T  44929912 ccccgcaagtggacggtgggattggtccccttgaattagtcgattcttggatcggataccgagtttta 44929845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 3405311 - 3405246
Alignment:
Q  107 tgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccataca 172  Q
    ||||||| ||| |||||| ||| |||||||||||||| |||||||||  |||||||||||||||||    
T  3405311 tgtgctcatctcaaggtcacaggttcgattccctctggtgccaattttaatgggcaagtccataca 3405246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 265
Target Start/End: Complemental strand, 30466976 - 30466829
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||| ||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||||||||||||| ||||    
T  30466976 aggtctcaggttcgattctctctgctgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaaccgggcccccgcaagtgggcagtgg 30466878  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
     ||||||||| | | |||| ||||| ||| ||| ||||||||| |||||    
T  30466877 gattggtcccttcggattagtcgattcttggatcggataccgagtttta 30466829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 10582136 - 10582080
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  10582136 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag 10582080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 17324817 - 17324873
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  17324817 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag 17324873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 26176357 - 26176289
Alignment:
Q  106 gtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacaga 174  Q
    |||||||||||| ||||||||||||||||||| | ||| ||||||||| | ||| | ||||||||||||    
T  26176357 gtgtgctcctctcaaggtctcagattcgattctccctggtgccaattttggtggcctagtccatacaga 26176289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 30943134 - 30943202
Alignment:
Q  107 tgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    ||||||||||| |||||||||  || ||||| |||| |||||||||||| ||||| |||||||||||||    
T  30943134 tgtgctcctctcaaggtctcaagtttgattctctcttatgccaatttcggtgggctagtccatacagag 30943202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 35171851 - 35171997
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccccgcaagtgggcggtgg 216  Q
    ||||||||| ||||||||||||||   ||||||||| ||||| ||||||||||||||  ||| | |||| |  |||||   |||||||||||||||||||    
T  35171851 aggtctcaggttcgattccctctggcaccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 35171949  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| ||||| |||  || ||||||||| ||||    
T  35171950 gattggtcccctcggattagtcgattcttgaatcggataccgagtttt 35171997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 226
Target Start/End: Complemental strand, 44976300 - 44976191
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacgg---tccccgcaagtgggcggtg 215  Q
    ||||||||| |||||||||||||| ||||||||| | ||||| ||||||||||||||| ||| | |||| |  |||||   |||||||||||||||||||    
T  44976300 aggtctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagagt-ttgctctggctttaaacggggctccccgcaagtgggcggtg 44976202  T
Q  216 gaattggtccc 226  Q
    | |||| ||||    
T  44976201 ggattgatccc 44976191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 198 - 265
Target Start/End: Complemental strand, 11941276 - 11941209
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    ||||||||||||||||||| ||||||||||| | |||| ||||| ||| ||| ||||||||| |||||    
T  11941276 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttta 11941209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 19525557 - 19525490
Alignment:
Q  105 agtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccataca 172  Q
    |||||| | |||| ||| |||||| |||||||||||||| ||||||||| | ||||||||||||||||    
T  19525557 agtgtgtttctctcaagatctcaggttcgattccctctggtgccaattttggtgggcaagtccataca 19525490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 40591218 - 40591289
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    |||||||||||||| || ||||||| || |||| | |||| || |||||||| |||||||||||||||||||    
T  40591218 gagtgtgctcctctcaaagtctcaggtttgatttcttctggtggcaatttcggtgggcaagtccatacagag 40591289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 4618847 - 4618779
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccataca 172  Q
    |||| ||||||||| ||||| |||| ||||||| || ||| |||||||||||  |||||||||||||||    
T  4618847 gagtatgctcctctcaaggtttcaggttcgatttcccctggtgccaatttcggcgggcaagtccataca 4618779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 4852660 - 4852716
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggat 254  Q
    |||||||||||| |||||||||||||||||| | |||||||||| ||| ||| ||||    
T  4852660 ccccgcaagtggacggtggaattggtcccctcggattaatcgattcttggatcggat 4852716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 20297602 - 20297654
Alignment:
Q  107 tgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgg 159  Q
    ||||||||||| ||||||||||||||||||   ||||||||||| ||||||||    
T  20297602 tgtgctcctctcaaggtctcagattcgattttttctgatgccaacttcgatgg 20297654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 245
Target Start/End: Original strand, 12543194 - 12543321
Alignment:
Q  119 aaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctag-aacggtccccgcaagtgggcggtgga 217  Q
    ||||||| ||||||||||  ||||  ||||||||| | |||||||||||||||||||  ||| | | |  ||| || || ||||||||||||  |||||     
T  12543194 aaggtctgagattcgattttctctagtgccaattttggtgggcaagtccatacagagctttgctctagtttagaaagggcccccgcaagtggatggtggg 12543293  T
Q  218 attggtccccttgaattaatcgatcctt 245  Q
    |||| ||||||||||||| ||| |||||    
T  12543294 attgctccccttgaattagtcggtcctt 12543321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 25293290 - 25293357
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    ||||||||||||||| ||| ||||||||||| | |||| ||||| ||| ||| ||||||||| |||||    
T  25293290 ccccgcaagtgggcgatgggattggtcccctcggattagtcgattcttggatcggataccgagtttta 25293357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 2140552 - 2140486
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||||||||||| ||||||||||| | |||| |||||  || ||| ||||||||| ||||    
T  2140552 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagtttt 2140486  T

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Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 14486960 - 14487022
Alignment:
Q  202 gcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||||||| ||||||||||| | |||| ||| ||||| ||| ||||||||| ||||    
T  14486960 gcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 14487022  T

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Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 18692091 - 18692157
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||| |||||||||||||| ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  18692091 ccccacaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgagtttt 18692157  T

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Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 23787155 - 23787097
Alignment:
Q  119 aaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagt 176  Q
    |||||||||| || ||||||||||| ||||||||||| ||||| || ||||||||||||    
T  23787155 aaggtctcaggtttgattccctctggtgccaatttcggtgggctaaatccatacagagt 23787097  T

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Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 3943790 - 3943847
Alignment:
Q  119 aaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||||||||||||  ||||| ||||||||||| | ||| ||||||||||||||    
T  3943790 aaggtctcagattcgattttctctggtgccaatttcggttggctaagtccatacagag 3943847  T

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Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 25293217 - 25293258
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc 161  Q
    ||||||||| |||||||||||||| ||||||||||| |||||    
T  25293217 aggtctcaggttcgattccctctggtgccaatttcggtgggc 25293258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 27269409 - 27269344
Alignment:
Q  199 cccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||||||||| |||| |||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  27269409 cccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggataggataccgagtttt 27269344  T

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Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 41329878 - 41329927
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaattt 153  Q
    |||| ||||||||  ||||| ||||||||||||||||||| |||||||||    
T  41329878 gagtttgctcctccaaaggtttcagattcgattccctctggtgccaattt 41329927  T

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Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 43374471 - 43374430
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc 161  Q
    ||||||||| |||||||||||||| ||||||||||| |||||    
T  43374471 aggtctcaggttcgattccctctggtgccaatttcggtgggc 43374430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 5394150 - 5394214
Alignment:
Q  200 ccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||||||||| ||||||||  | | |||| ||| ||||| ||| ||||||||||||||    
T  5394150 ccgcaagtgggcggtgggattggtccgttcggattagtcggtccttagatcggataccgaatttt 5394214  T

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Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 196
Target Start/End: Complemental strand, 8024832 - 8024740
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacgg 196  Q
    ||||||| | |||| ||||| |||  ||||||| ||| | ||||||||||||||||| || |||||||||| | ||||| || | ||||||||    
T  8024832 gagtgtgtttctctcaaggtttcaagttcgatttccttttatgccaatttcgatgggtaaatccatacagaattttgttgtgacttagaacgg 8024740  T

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Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 27290639 - 27290695
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| |||||||||||  | ||||||||||| ||||| ||||||||||||||    
T  27290639 aggtctcaggttcgattcccttcggtgccaatttcggtgggctaagtccatacagag 27290695  T

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Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 32845126 - 32845194
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatac 171  Q
    |||| ||||||||  || || |||| |||||||||||||| ||||||||||| ||||| ||||||||||    
T  32845126 gagtttgctcctccaaaagtttcaggttcgattccctctggtgccaatttcggtgggctaagtccatac 32845194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 36179927 - 36179979
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggcaagtccataca 172  Q
    ||||||||  |||||||| | |||||| |||||||||| ||||||||||||||    
T  36179927 aggtctcatgttcgattctccctgatgtcaatttcgataggcaagtccataca 36179979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 41314043 - 41314099
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| |||||||||||||| || |||||||| ||||| ||||| ||||||||    
T  41314043 aggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtctatacagag 41314099  T

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Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 104 - 264
Target Start/End: Original strand, 28647008 - 28647170
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaac--ggtcccc 201  Q
    ||||||||| |||| |||||||||| |||||||||||||| ||||||||||| |||||||||| ||||||||| ||| | |||| || |||  || ||||    
T  28647008 gagtgtgcttctctcaaggtctcaggttcgattccctctggtgccaatttcggtgggcaagtcaatacagagttttgctctggcttataacggggccccc 28647107  T
Q  202 gcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     |||||||||||||| |||||| |||| |||||| ||  ||||| ||| ||||| ||| ||||    
T  28647108 acaagtgggcggtgggattggttccctcgaattagtctgtccttggatcggatatcgagtttt 28647170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 104 - 264
Target Start/End: Complemental strand, 23330901 - 23330739
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacgg--tcccc 201  Q
    |||||||||||||| |||||||||| ||||| |||||| | ||||||||||| |||||||||||||||||||  ||| | |||| || |||||   | ||    
T  23330901 gagtgtgctcctctcaaggtctcaggttcgactccctccggtgccaatttcggtgggcaagtccatacagagctttgctctggcttaaaacgggacctcc 23330802  T
Q  202 gcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||||   |||||||||||  ||||| || |||||| ||| ||||||||| ||||    
T  23330801 gcaagtgggcggtaagattggtcccctcaaattagtcaatccttggatcggataccgagtttt 23330739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 264
Target Start/End: Complemental strand, 654861 - 654705
Alignment:
Q  109 tgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac-ggtccccgcaag 206  Q
    ||||||||  |||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  ||| || |||||||||    
T  654861 tgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacgggcccccgcaag 654763  T
Q  207 tgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||| ||||||||||| | |||| ||| | ||| ||| ||||||||| ||||    
T  654762 tgggcggtgggattggtcccctcggattagtcggttcttggatcggataccgagtttt 654705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 104 - 264
Target Start/End: Original strand, 2751310 - 2751472
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccc 200  Q
    |||| ||||||||  |||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||    
T  2751310 gagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccc 2751408  T
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||| |||||||||| ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  2751409 cgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 2751472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 7275332 - 7275478
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||||||||||||||||||    
T  7275332 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacagggcccccgcaagtgggcggtgg 7275430  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  7275431 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 7275478  T

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Target: chr7; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 104 - 264
Target Start/End: Original strand, 11997888 - 11998050
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccc 200  Q
    |||| |||||||||  ||||||||| |||||||||||||| ||||||||||| | ||| ||||||||||| ||  ||| | |||| |  |||  || |||    
T  11997888 gagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggttggctaagtccatacatagc-ttgctctggctttaaactgggcccc 11997986  T
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||||||| ||||||||||| |||||| ||||| ||| ||| ||||||||| ||||    
T  11997987 cgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 11998050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 22119943 - 22120089
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||||||||||||||||||    
T  22119943 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccccgcaagtgggcggtgg 22120041  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  22120042 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 22120089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 40543056 - 40542910
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||||||||||||||||||    
T  40543056 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccccgcaagtgggcggtgg 40542958  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  40542957 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 40542910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 265
Target Start/End: Complemental strand, 17197096 - 17196949
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccccgcaagtgggcggtgg 216  Q
    ||||||||  |||||||||||||| ||||||||||| || || ||||||||||||||  ||| | |||| |  |||||   |||||||||||||||||||    
T  17197096 aggtctcaagttcgattccctctggtgccaatttcggtgagctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 17196998  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
     ||||||||||| |||||| ||||| ||| ||| ||||||||| |||||    
T  17196997 gattggtcccctcgaattagtcgattcttggatcggataccgagtttta 17196949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 37056253 - 37056322
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacag 173  Q
    |||||||||||||| ||||| | |||||||||| |||||| ||||||||||||||| |||||||||||||    
T  37056253 gagtgtgctcctctcaaggtttgagattcgatttcctctggtgccaatttcgatggacaagtccatacag 37056322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 264
Target Start/End: Original strand, 2344338 - 2344500
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacgg--tccc 200  Q
    |||| ||||||||  ||| |||||||||||||||| |||| ||||||||| | ||||| ||||||||||||||  || ||||||| |  |||||   |||    
T  2344338 gagtttgctcctccaaagctctcagattcgattccttctggtgccaattttggtgggctaagtccatacagag-ctttttttggctttaaacgggacccc 2344436  T
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||| ||||||| ||||||||||| | |||| ||| ||||| ||| ||||||||| ||||    
T  2344437 cgcaagtgagcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 2344500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 29861725 - 29861871
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||||   ||| | |||| |  |||  || |||||||||||||||||||    
T  29861725 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacaga-acttgctctggctttaaacggggcccccgcaagtgggcggtgg 29861823  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     |||| |||||| |||||| ||||| ||| ||| ||||||||| ||||    
T  29861824 gattgatcccctcgaattagtcgattcttagatcggataccgagtttt 29861871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 12211697 - 12211626
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    |||||||||||||| ||| |||||| || |||| |||||| ||||||||||||||| |||||||||||||||    
T  12211697 gagtgtgctcctctcaagatctcaggtttgatttcctctggtgccaatttcgatggacaagtccatacagag 12211626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 264
Target Start/End: Original strand, 21835209 - 21835352
Alignment:
Q  123 tctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtggaat 219  Q
    |||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || ||||||||||||||||||| ||    
T  21835209 tctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccccgcaagtgggcggtgggat 21835307  T
Q  220 tggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||| | |||| ||||| ||| ||| ||||| ||| ||||    
T  21835308 tggtcccctcggattagtcgattcttggatcggatatcgagtttt 21835352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 257
Target Start/End: Original strand, 22703541 - 22703680
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| || |||||||| ||||| ||||||||||| ||  ||| | |||| |  |||||   |||||||||||||||||||    
T  22703541 aggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagc-ttgctctggctttaaacgggacccccgcaagtgggcggtgg 22703639  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggatacc 257  Q
     ||||||||||| | |||| ||||| ||||||| |||||||    
T  22703640 gattggtcccctcggattagtcgattctttgatcggatacc 22703680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 256
Target Start/End: Complemental strand, 7176008 - 7175870
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  |  |||||||||||||||||||    
T  7176008 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacaggacccccgcaagtgggcggtgg 7175910  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggatac 256  Q
     ||||||||||| | |||| ||||| ||| ||| ||||||    
T  7175909 gattggtcccctcggattagtcgattcttggatcggatac 7175870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 16374049 - 16374195
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatggg-caagtccatacagagtgttgttttggcctagaacgg--tccccgcaagtgggcggtgg 216  Q
    |||||||||||||||||||||||| ||||||||||| ||||  ||||||||||||| | ||| | |||| |  |||||   |||||||| ||| ||||||    
T  16374049 aggtctcagattcgattccctctggtgccaatttcggtgggttaagtccatacagaat-ttgctatggctttaaacgggacccccgcaaatggacggtgg 16374147  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  16374148 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 16374195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 21217979 - 21217923
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  21217979 aggtctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagag 21217923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 264
Target Start/End: Complemental strand, 21574265 - 21574102
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgatt-ccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaac--ggtccc 200  Q
    |||||||||||||| |||||| ||| ||||||| |||| || |||||| |||| |||||||||||||||||||  |||    ||| ||||||  || |||    
T  21574265 gagtgtgctcctctcaaggtcacaggttcgattcccctttggtgccaacttcggtgggcaagtccatacagagctttgcccaggcttagaacggggcccc 21574166  T
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    | ||||| |||||||  ||||||||||| | |||| ||| ||||| ||| ||||||||| ||||    
T  21574165 cacaagtaggcggtgagattggtcccctcggattagtcggtccttggatcggataccgagtttt 21574102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 265
Target Start/End: Complemental strand, 8943467 - 8943400
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    ||||||||||||||||||  |||||||||||||||||| ||||| ||| ||| |||||| ||||||||    
T  8943467 ccccgcaagtgggcggtgtgattggtccccttgaattagtcgattcttggatcggatactgaatttta 8943400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 265
Target Start/End: Original strand, 22696359 - 22696523
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacg-gtccc-- 200  Q
    |||||||||||||| |||||||||| || ||||||||||| ||||||||||| ||||  | |||||||||||  ||| | |||| ||||||| | |||      
T  22696359 gagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaatttcggtggg-gactccatacagagctttgctctggcttagaacgaggccccc 22696457  T
Q  201 -cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
     ||||||| ||||| || |||||||| || | |||| ||| ||||| ||| ||||||||| |||||    
T  22696458 gcgcaagtaggcggcgggattggtcctctcggattagtcggtccttggatcggataccgagtttta 22696523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 1469166 - 1469219
Alignment:
Q  119 aaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccataca 172  Q
    |||||||||| ||||||| ||| | |||||||||||||||||||||||||||||    
T  1469166 aaggtctcaggttcgatttcctttaatgccaatttcgatgggcaagtccataca 1469219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 216
Target Start/End: Complemental strand, 8435857 - 8435745
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacggtccccgc 203  Q
    |||| ||||||| | ||| ||| || ||||||| |||||| ||||||||||| |||||||||||||||| ||  |||||||||| |  |  || ||||||    
T  8435857 gagtttgctcctttgaagatcttaggttcgatttcctctggtgccaatttcggtgggcaagtccatacaaagctttgttttggctttaatgggcccccgc 8435758  T
Q  204 aagtgggcggtgg 216  Q
    |||||||| ||||    
T  8435757 aagtgggcagtgg 8435745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 120 - 241
Target Start/End: Original strand, 10091243 - 10091366
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaa--cggtccccgcaagtgggcggtgg 216  Q
    ||||||||| ||||||||||||||  |||||||||| ||||| ||||||||||||||  ||| | |||| |  ||   ||||||||||||||||||||||    
T  10091243 aggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagag-cttgctctggctttaaatggggtccccgcaagtgggcggtgg 10091341  T
Q  217 aattggtccccttgaattaatcgat 241  Q
     |||| |||||| | |||| |||||    
T  10091342 gattgatcccctcggattagtcgat 10091366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 18044162 - 18044309
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||| ||| |||||||||||||  ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||| |||||||| |||||    
T  18044162 aggtcccaggttcgattccctcttgtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccccacaagtgggtggtgg 18044260  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    ||||||||||||   |||| ||||| ||| ||| ||||||||| |||||    
T  18044261 aattggtcccctcagattagtcgattcttggatcggataccgagtttta 18044309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 40332138 - 40332195
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc 161  Q
    |||| ||||||||| |||||||||| ||||||| |||||| || ||||||||||||||    
T  40332138 gagtttgctcctctaaaggtctcaggttcgatttcctctggtgtcaatttcgatgggc 40332195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 42814903 - 42814972
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccataca 172  Q
    |||| |||||||||| | ||||||| |||||||||||||| || |||||||| ||||| |||||||||||    
T  42814903 gagtttgctcctcttgaagtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccataca 42814972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 2103110 - 2103166
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| ||||||||||||||  |||||||||| ||||| ||||||||||||||    
T  2103110 aggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagag 2103166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 13332585 - 13332513
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||| |||||||| | ||||||||| | ||||||||||||  |||||||||| ||||| ||||||||||||||    
T  13332585 gagtttgctcctcctgaggtctcaggtacgattccctctggagccaatttcggtgggctaagtccatacagag 13332513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 19421270 - 19421342
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||| |||||||||  ||||||||| ||||||| | |||| || |||||||||||||| ||||||||||||||    
T  19421270 gagtttgctcctctagaggtctcaggttcgatttcttctggtgtcaatttcgatgggctaagtccatacagag 19421342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 27009414 - 27009470
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| |||||| ||||||| ||||||||||| ||||| ||||||||||||||    
T  27009414 aggtctcaggttcgatcccctctggtgccaatttcggtgggctaagtccatacagag 27009470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 27312191 - 27312263
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatg-ggcaagtccatacagag 175  Q
    |||| |||||||||  |||| |||| |||||||||||||  |||||||||||||| | |||||||||||||||    
T  27312191 gagtttgctcctctagaggtttcaggttcgattccctctagtgccaatttcgatgtgccaagtccatacagag 27312263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 36173089 - 36173145
Alignment:
Q  119 aaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    ||||| |||| |||||||||||||  ||||||||| | |||||||||||||||||||    
T  36173089 aaggtttcaggttcgattccctcttgtgccaattttggtgggcaagtccatacagag 36173145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 3851892 - 3851959
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    ||||||||||||||||||| |||| |||||| | |||| ||||| ||| ||| ||||||||| |||||    
T  3851892 ccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagtttta 3851959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 143
Target Start/End: Complemental strand, 22264664 - 22264625
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctg 143  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  22264664 gagtttgctcctctcaaggtctcagattcgattccctctg 22264625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 31712965 - 31712902
Alignment:
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||||||| ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  31712965 cgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 31712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 263
Target Start/End: Complemental strand, 1766279 - 1766145
Alignment:
Q  130 ttcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacggt-ccccgcaagtgggcggtggaattggtcccct 228  Q
    ||||||||||| |  || |||||||| |||| |||||||||||||   |||  ||||| ||||||||  |||| |||||||||||| | |||||||||||    
T  1766279 ttcgattcccttttgtgtcaatttcggtgggtaagtccatacagaactttgccttggcttagaacggggccccacaagtgggcggttggattggtcccct 1766180  T
Q  229 tgaattaatcgatcctttgatgggataccgaattt 263  Q
     | |||| ||| | |||  || |||||||||||||    
T  1766179 cggattagtcggtacttgaatcggataccgaattt 1766145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 27312287 - 27312353
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||||||||||| |||||||||||   |||| ||||| ||| ||| ||||||||| ||||    
T  27312287 ccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagtttt 27312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 33137887 - 33137825
Alignment:
Q  202 gcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||||| |||||||||||| |||||| ||||| ||| ||| ||||| ||| ||||    
T  33137887 gcaagtgggcggtgaaattggtcccctcgaattagtcgattcttagatcggatatcgagtttt 33137825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 5844617 - 5844682
Alignment:
Q  109 tgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacaga 174  Q
    ||||| ||||||||||  || ||||||| || |||||||||||||| |||| |||||| |||||||    
T  5844617 tgctcatcttaaggtcagaggttcgatttccactgatgccaatttcaatggacaagtctatacaga 5844682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 254
Target Start/End: Original strand, 47541423 - 47541574
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacggtcccc-- 201  Q
    |||||||||||||| ||||| | |  || ||||| || || || |||||||| ||| ||||| ||| |||  | ||| |||||| |||||||| ||||      
T  47541423 gagtgtgctcctctcaaggttttaagtttgattctctttggtgtcaatttcggtggacaagttcatccaggct-ttgctttggcttagaacgggcccccc 47541521  T
Q  202 gcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggat 254  Q
    |||||||| | |||||||||||||||||  |||| ||||||||| ||| ||||    
T  47541522 gcaagtggacagtggaattggtccccttagattagtcgatccttagatcggat 47541574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 3951152 - 3951084
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccataca 172  Q
    |||||||||||||| || ||||| | |||| ||  ||||||||| ||||||| ||||||||||| ||||    
T  3951152 gagtgtgctcctctcaaagtctcgggttcgcttttctctgatgctaatttcggtgggcaagtccgtaca 3951084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 9718149 - 9718077
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||| ||||||||  || ||||||  |||||||||||||| || |||||||||||||| ||||||||| ||||    
T  9718149 gagtttgctcctccaaaagtctcaagttcgattccctctggtgtcaatttcgatgggctaagtccatagagag 9718077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 17212108 - 17212164
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| ||| |||| ||||| ||||||||||| ||||| ||||||||||||||    
T  17212108 aggtctcaggttcaattctctctggtgccaatttcggtgggctaagtccatacagag 17212164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 36772362 - 36772302
Alignment:
Q  205 agtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    |||||||||||||||| |||| || | |||| ||||| ||||||| ||||||||| |||||    
T  36772362 agtgggcggtggaattagtcctctcggattagtcgattctttgatcggataccgagtttta 36772302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 9e-25; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 104 - 265
Target Start/End: Complemental strand, 19145573 - 19145411
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacggt-ccccg 202  Q
    |||| ||||||||| |||||||| | |||||||||||||| ||||||||||| |||||||||||||||||||  ||| | |||| |  || ||| |||||    
T  19145573 gagtatgctcctctcaaggtctccggttcgattccctctggtgccaatttcggtgggcaagtccatacagagctttgctctggctttaaatggtcccccg 19145474  T
Q  203 caagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    |||||||||||||| ||||||||||| | |||| | | | ||| ||| ||||||||| |||||    
T  19145473 caagtgggcggtgggattggtcccctcggattagttggttcttggatcggataccgagtttta 19145411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 18207258 - 18207404
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacg--gtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||| | ||||||||||| ||||| ||||||||||||||  ||||| |||| |  ||||  | |||||||||||||||||||    
T  18207258 aggtctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagc-ttgttctggctttaaacgaggcccccgcaagtgggcggtgg 18207356  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  18207357 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 18207404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 104 - 264
Target Start/End: Complemental strand, 27498893 - 27498731
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccc 200  Q
    |||| |||||||||  ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||| ||  ||| | |||| |  |||  || |||    
T  27498893 gagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacatag-cttgctctggctttaaacggggcccc 27498795  T
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||||||| ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  27498794 cgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 27498731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 104 - 264
Target Start/End: Complemental strand, 32059602 - 32059440
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccc 200  Q
    |||| ||||||||  |||||||||| ||||||||| |||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||    
T  32059602 gagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccc 32059504  T
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||||||| ||||||||||| | |||| ||| ||||| ||| ||||||||| ||||    
T  32059503 cgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 32059440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 38684259 - 38684404
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac-ggtccccgcaagtgggcggtgga 217  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  ||| || ||||||||||| |||||||     
T  38684259 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacgggcccccgcaagtgagcggtggg 38684357  T
Q  218 attggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  38684358 attggtcccctcggattagtcgattcttggatcggataccgattttt 38684404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 265
Target Start/End: Original strand, 36895460 - 36895623
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacg--gtcccc 201  Q
    |||||||||||||| ||||| |||  |||||||||||||| | ||||||||| ||| |||||||||||| ||  ||| | |||| |||||||  | | ||    
T  36895460 gagtgtgctcctctcaaggtttcatgttcgattccctctggtaccaatttcggtggtcaagtccatacaaagctttgctctggcttagaacgtagccgcc 36895559  T
Q  202 gcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    |||||||||||| || |||| || ||| |||||| ||| | ||| ||| ||||||||| |||||    
T  36895560 gcaagtgggcggggggattgttctcctcgaattagtcggttcttggatcggataccgagtttta 36895623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 38631107 - 38631051
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  38631107 aggtctcagattcgattccctctggtgccaatttcgatgggctaagtccatacagag 38631051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 19456355 - 19456211
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt-ccccgcaagtgggcggtgga 217  Q
    ||||||||| |||||| ||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||||  |||||||||||||||||||     
T  19456355 aggtctcaggttcgat-ccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggccccgcaagtgggcggtggg 19456258  T
Q  218 attggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  19456257 attggtcccctcggattagtcgattcttggatcggataccgagtttt 19456211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 225
Target Start/End: Original strand, 42193536 - 42193641
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggtccccgcaagtgggcggtggaa 218  Q
    ||||||||| ||||||| |||||||||||||||||| ||||| ||||| ||||||||| ||| |||||| |  || || |||||||||||||||||||      
T  42193536 aggtctcaggttcgatttcctctgatgccaatttcggtgggctaagtctatacagagt-ttgctttggctttaaatggaccccgcaagtgggcggtgggg 42193634  T
Q  219 ttggtcc 225  Q
    |||||||    
T  42193635 ttggtcc 42193641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 34310193 - 34310340
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggtccccgca--agtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||| | ||||| ||||||||||||||  ||| | |||| |  |||||  ||| ||  ||||| ||||||    
T  34310193 aggtctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagagc-ttgctctggctttaaacgggacccccataagtggacggtgg 34310291  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
     ||||||||||| |||||||||||| ||| ||| ||||||||| |||||    
T  34310292 gattggtcccctcgaattaatcgattcttggatcggataccgagtttta 34310340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 8484807 - 8484661
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccccgcaagtgggcggtgg 216  Q
    ||||||||| || ||||||||||| ||||||||||| ||||| |||| |||||||||  ||| | |||| |  |||||   |||||||||||||||||||    
T  8484807 aggtctcaggtttgattccctctggtgccaatttcggtgggctaagttcatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 8484709  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  8484708 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 8484661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 15641251 - 15641106
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| ||||||||||||||  |||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||||||||||||||||||    
T  15641251 aggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccccgcaagtgggcggtgg 15641153  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| ||||| | ||||| ||||||||| ||||    
T  15641152 gattggtcccctcggattagtcgattc-ttgatcggataccgagtttt 15641106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 265
Target Start/End: Complemental strand, 11926648 - 11926500
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacgg---tccccgcaagtgggcggtg 215  Q
    ||||||||| || ||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||||    ||||||||||||| ||||    
T  11926648 aggtctcaggttagattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggccccccgcaagtgggtggtg 11926550  T
Q  216 gaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    | ||||||||||| | |||| ||||| ||| ||| ||||||||| |||||    
T  11926549 ggattggtcccctcggattagtcgattcttggatcggataccgagtttta 11926500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 265
Target Start/End: Complemental strand, 13659311 - 13659244
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    ||||||||||||||||||| |||| |||||| | |||||||||| ||| ||| |||||||||||||||    
T  13659311 ccccgcaagtgggcggtgggattgatcccctcggattaatcgattcttggatcggataccgaatttta 13659244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 38631045 - 38630979
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||||||||||| ||||||||||| | |||||||||| ||| ||| ||||||||| ||||    
T  38631045 ccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccgagtttt 38630979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 30485879 - 30486025
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||| ||||| || |||||||| ||||| ||||||||||||||  ||| | |||| |  |||| |  |||||||||||||||||||    
T  30485879 aggtctcaggttcgattcactctggtgtcaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgatgcccccgcaagtgggcggtgg 30485977  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| || || ||| ||| ||||||||| ||||    
T  30485978 gattggtcccctcggattagtcaattcttggatcggataccgagtttt 30486025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 198 - 265
Target Start/End: Complemental strand, 13038521 - 13038454
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    ||||||||||||||||||| |||| |||||| |||||| ||||| ||| ||| |||||| ||||||||    
T  13038521 ccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatactgaatttta 13038454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 22693066 - 22693133
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    ||||||||||||||||||| ||||||||||| | |||| ||||| ||| ||| ||||||||| |||||    
T  22693066 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttta 22693133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 265
Target Start/End: Complemental strand, 24158311 - 24158165
Alignment:
Q  121 ggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtggaa 218  Q
    |||||||| ||||||||| |||| || ||||||||||||| ||||||||||| ||  ||  | |||| ||||||  || | | ||||||||||||||  |    
T  24158311 ggtctcaggttcgattccttctggtgtcaatttcgatgggtaagtccatacatagctttactctggcttagaacggggcctctgcaagtgggcggtgaga 24158212  T
Q  219 ttggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    ||||||||||   |||| ||| |||||  || |||||||||||||||    
T  24158211 ttggtcccctcagattagtcggtccttgaatcggataccgaatttta 24158165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 8780513 - 8780579
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccata 170  Q
    |||||||||||||| |||||||||| |||||||  ||||  || ||||||||||||| |||||||||    
T  8780513 gagtgtgctcctctcaaggtctcaggttcgattgtctcttgtgtcaatttcgatgggtaagtccata 8780579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 35425144 - 35425210
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||||||||||| |||||||| || | |||| ||||| ||| ||| ||||||||||||||    
T  35425144 ccccgcaagtgggcggtgggattggtcctctcggattagtcgattcttggatcggataccgaatttt 35425210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 42006868 - 42006930
Alignment:
Q  202 gcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||||||||||| ||| |||| |||| | ||| ||||||| ||||||||||||||    
T  42006868 gcaagtgggcggtggaattgttccacttggattagttgattctttgatcggataccgaatttt 42006930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 7085695 - 7085626
Alignment:
Q  195 ggtccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||||||||||||| ||||||||||| | |||| ||||| |||  || ||||||||| ||||    
T  7085695 ggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagtttt 7085626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 11464974 - 11464913
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccga 259  Q
    ||||||||||||| ||||| ||||||||||| |||||| ||||| ||| ||| |||||||||    
T  11464974 ccccgcaagtgggtggtgggattggtcccctcgaattagtcgattcttggatcggataccga 11464913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 13108516 - 13108451
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaattt 263  Q
    ||||||||||||||||||| |||| |||||| |||||| ||||| ||| ||| |||||| ||||||    
T  13108516 ccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatactgaattt 13108451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 175
Target Start/End: Original strand, 15931112 - 15931165
Alignment:
Q  122 gtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    ||||||| |||||||||||||| ||||||||||| |||  ||||||||||||||    
T  15931112 gtctcaggttcgattccctctggtgccaatttcggtggctaagtccatacagag 15931165  T

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Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 37495186 - 37495251
Alignment:
Q  199 cccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||||||||| ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  37495186 cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 37495251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 1827676 - 1827620
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatggg-caagtccatacagag 175  Q
    ||||||||| |||||||||||||||| ||||||||| ||||  ||||||||||||||    
T  1827676 aggtctcaggttcgattccctctgataccaatttcggtgggttaagtccatacagag 1827620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 4603812 - 4603884
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||| ||||||||  ||| |||||  ||||||||| |||| ||||||||||||||||| ||||||||||||||    
T  4603812 gagtttgctcctccaaagatctcaagttcgattccttctggtgccaatttcgatgggctaagtccatacagag 4603884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 13038600 - 13038544
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| |||||||||||||| ||||||||| ||||||| |||| |||||||||    
T  13038600 aggtctcaggttcgattccctctggtgccaattttgatgggctaagttcatacagag 13038544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 25586983 - 25587039
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| ||||||| |||||| ||||||||||| ||||| ||||||||||||||    
T  25586983 aggtctcaggttcgatttcctctggtgccaatttcggtgggctaagtccatacagag 25587039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 33709647 - 33709591
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||  |||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  33709647 aggtctcaagttcgattccctctggtgccaatttcggtgggctaagtccatacagag 33709591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 37495098 - 37495154
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| |||||||||||||| ||||||||| | ||||| ||||||||||||||    
T  37495098 aggtctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagag 37495154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 37810619 - 37810659
Alignment:
Q  119 aaggtctcagattcgattccctctgatgccaatttcgatgg 159  Q
    ||||||| ||||||||||| |||||||||||||||||||||    
T  37810619 aaggtcttagattcgattcactctgatgccaatttcgatgg 37810659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 41351168 - 41351104
Alignment:
Q  200 ccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||||||||| ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  41351168 ccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 41351104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 32061269 - 32061202
Alignment:
Q  107 tgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacaga 174  Q
    |||||| |||| | |||||||| || ||||||||||||||||| ||| | ||||| ||||||||||||    
T  32061269 tgtgcttctctaatggtctcaggtttgattccctctgatgccagttttggtgggctagtccatacaga 32061202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 2499335 - 2499269
Alignment:
Q  109 tgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    ||||||| | || ||||||| |||||||| | ||| || ||||||||||||||||||||||| ||||    
T  2499335 tgctcctttcaaagtctcaggttcgattctccctgttgtcaatttcgatgggcaagtccatatagag 2499269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 22392819 - 22392849
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtcccct 228  Q
    |||||||||||||||||||||||||||||||    
T  22392819 ccccgcaagtgggcggtggaattggtcccct 22392849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 257
Target Start/End: Complemental strand, 23270669 - 23270529
Alignment:
Q  119 aaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacg--gtccccgcaagtgggcggtg 215  Q
    |||||||||  ||||||| |||| ||||||||||||| ||||| ||||||||||||||  ||| |||||| |  ||||  | |||||||| ||| |||||    
T  23270669 aaggtctcaagttcgatttcctccgatgccaatttcggtgggctaagtccatacagag-cttgctttggctttaaacggagcccccgcaaatggacggtg 23270571  T
Q  216 gaattggtccccttgaattaatcgatcctttgatgggatacc 257  Q
    | ||||||||||| | |||| | ||| ||| ||| |||||||    
T  23270570 ggattggtcccctcggattagttgattcttggattggatacc 23270529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 5049187 - 5049244
Alignment:
Q  119 aaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||||||||||||| |||||||||| | ||||||||||||| | |||| |||||||||    
T  5049187 aaggtctcagattcaattccctctggtaccaatttcgatggtctaagttcatacagag 5049244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 13108592 - 13108539
Alignment:
Q  123 tctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||||| |||||||||||||| ||||||||| ||||||| |||| |||||||||    
T  13108592 tctcaggttcgattccctctggtgccaattttgatgggctaagttcatacagag 13108539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 15485453 - 15485385
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatggg-caagtccataca 172  Q
    |||||||||||||| |||||||||| |||||||||| ||||  ||||||||| ||||  |||||||||||    
T  15485453 gagtgtgctcctctcaaggtctcaggttcgattccc-ctgacaccaatttcggtgggttaagtccataca 15485385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 19883209 - 19883168
Alignment:
Q  102 ttgagtgtgctcctcttaaggtctcagattcgattccctctg 143  Q
    |||||||||||||||| |||||||||| ||||||| ||||||    
T  19883209 ttgagtgtgctcctctcaaggtctcaggttcgatttcctctg 19883168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 20508849 - 20508909
Alignment:
Q  203 caagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||| ||||| ||||||||||| |||||||||||| | ||||| ||||||| ||||||    
T  20508849 caagtgggtggtgggattggtcccctcgaattaatcgattc-ttgatcggataccaaatttt 20508909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 10824106 - 10824050
Alignment:
Q  119 aaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    |||||||||  |||||||  ||||  ||||||||||||||||||||||| |||||||    
T  10824106 aaggtctcaagttcgattatctctagtgccaatttcgatgggcaagtccttacagag 10824050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 198 - 258
Target Start/End: Complemental strand, 33709569 - 33709509
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccg 258  Q
    |||| |||||||||||||| ||||||||||| | |||| ||||| ||| ||| ||||||||    
T  33709569 ccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccg 33709509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 37684836 - 37684876
Alignment:
Q  119 aaggtctcagattcgattccctctgatgccaatttcgatgg 159  Q
    ||||||| ||||||||||| |||||||| ||||||||||||    
T  37684836 aaggtcttagattcgattcactctgatgtcaatttcgatgg 37684876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 6e-23; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 104 - 256
Target Start/End: Complemental strand, 25237151 - 25236997
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacggt--cccc 201  Q
    |||| |||| |||| |||||||||| |||||||||||||  ||||||||||| |||||||||||||||||||| ||| | || | ||||| |||  | ||    
T  25237151 gagtttgcttctctcaaggtctcaggttcgattccctctagtgccaatttcggtgggcaagtccatacagagttttgctctgacttagaatggtgcctcc 25237052  T
Q  202 gcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggatac 256  Q
    |||||||| ||||||||||||||| ||   |||| ||| ||||||||| ||||||    
T  25237051 gcaagtggacggtggaattggtcctctcatattagtcggtcctttgatcggatac 25236997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 24674444 - 24674591
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||||   |||||||||||||||||||    
T  24674444 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 24674542  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
     ||||||||||| | |||| ||||| ||| ||| |||||||||||||||    
T  24674543 gattggtcccctcgtattagtcgattcttggatcggataccgaatttta 24674591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 4621383 - 4621237
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacgg--tccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||||  ||||||||||||||||||||    
T  4621383 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggtccccgcaagtgggcggtgg 4621285  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  4621284 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 4621237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 264
Target Start/End: Original strand, 32729580 - 32729741
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaa--cggtcccc 201  Q
    |||| ||||||||| || ||||||| ||||||||||| || ||||||||||| |||||||||||||||||||  ||| | |||| |  ||   |||||||    
T  32729580 gagtttgctcctctcaaagtctcaggttcgattccctatggtgccaatttcggtgggcaagtccatacagag-cttgctctggctttaaatggggtcccc 32729678  T
Q  202 gcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||||||| |||| |||||||| |||| ||| || || ||| ||||||||| ||||    
T  32729679 gcaagtgggcggtgggattgatccccttggattagtcggtctttggatcggataccgagtttt 32729741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 15059548 - 15059402
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacgg--tccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||| ||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||||  |||||||||||||||||||     
T  15059548 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggtccccgcaagtgggcggtga 15059450  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| |||||| ||||| ||| ||| ||||||||| ||||    
T  15059449 gattggtcccctcgaattagtcgattcttggatcggataccgagtttt 15059402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 108 - 264
Target Start/End: Original strand, 1486457 - 1486617
Alignment:
Q  108 gtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacgg----tccccgc 203  Q
    ||||| |||| |||||||||| ||||||||||| || |||||||||||||||| ||||||||||||||  ||| | || | ||||||||     ||||||    
T  1486457 gtgctactctcaaggtctcaggttcgattccctttggtgccaatttcgatgggtaagtccatacagagctttgctctgacttagaacggggcccccccgc 1486556  T
Q  204 aagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||| |||||| || ||||||||   |||| ||| ||||| ||| ||||||||| ||||    
T  1486557 aagtggacggtgggatcggtcccctccgattagtcggtccttggatcggataccgagtttt 1486617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 265
Target Start/End: Complemental strand, 9926310 - 9926145
Alignment:
Q  104 gagtgtgctcctcttaaggtctc--agattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacg--gtcc 199  Q
    |||||||||||||| ||||||||  |||||||||||| |||| || |||||| | ||||||| |||||||| ||| ||| | |||| |||||||  | ||    
T  9926310 gagtgtgctcctctcaaggtctctcagattcgattccttctggtgtcaattttggtgggcaaatccatacaaagttttgctctggcttagaacggagccc 9926211  T
Q  200 ccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    |||||| |||||||||| |||| |||| ||  |||| ||| ||||| ||| ||||||||| |||||    
T  9926210 ccgcaactgggcggtgggattgatccctttagattagtcggtccttcgatcggataccgagtttta 9926145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 119 - 264
Target Start/End: Original strand, 16539658 - 16539804
Alignment:
Q  119 aaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaac-ggtccccgcaagtgggcggtgga 217  Q
    |||||||||| || ||||||||||| ||||||||| | |||||||||||||||||||  |||   |||| |||||| || ||| | ||||||| |||||     
T  16539658 aaggtctcaggtttgattccctctggtgccaattttggtgggcaagtccatacagagctttgcgctggcttagaacggggccctgtaagtgggtggtggg 16539757  T
Q  218 attggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||  ||||| ||||| |||  || ||||||||||||||    
T  16539758 attggtcccctcaaattagtcgatacttgtatcggataccgaatttt 16539804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 24122074 - 24122221
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  ||  ||||||||||||||||||    
T  24122074 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggctcccgcaagtgggcggtgg 24122172  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
     ||||||||||| | |||| ||||| ||| ||| ||||||||| |||||    
T  24122173 gattggtcccctcggattagtcgattcttggatcggataccgagtttta 24122221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 239
Target Start/End: Original strand, 10059090 - 10059227
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacg--gtcccc 201  Q
    |||| ||||||||| || ||||||| ||  |||| |||| ||| |||||||||||||||||| |||||||||| |||||||||| |  ||||  |  ||     
T  10059090 gagtttgctcctctcaaagtctcaggtttaattctctctaatgtcaatttcgatgggcaagttcatacagagttttgttttggctttaaacggagctcct 10059189  T
Q  202 gcaagtgggcggtggaattggtccccttgaattaatcg 239  Q
    |||||||| ||||||||||||  ||||| |||||||||    
T  10059190 gcaagtggacggtggaattggctcccttcaattaatcg 10059227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 23734167 - 23734278
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacgg---tccccgcaagtgggcggtg 215  Q
    ||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||| ||| | || | |  |||||    ||||||||||||||||||    
T  23734167 aggtctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagt-ttgctatgcctttaaacggggccccccgcaagtgggcggtg 23734265  T
Q  216 gaattggtcccct 228  Q
     ||||||||||||    
T  23734266 aaattggtcccct 23734278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 23741359 - 23741470
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacgg---tccccgcaagtgggcggtg 215  Q
    ||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||| ||| | || | |  |||||    ||||||||||||||||||    
T  23741359 aggtctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagt-ttgctatgcctttaaacggggccccccgcaagtgggcggtg 23741457  T
Q  216 gaattggtcccct 228  Q
     ||||||||||||    
T  23741458 aaattggtcccct 23741470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 228
Target Start/End: Original strand, 30677211 - 30677337
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacgg--tccc 200  Q
    |||| ||||||||  |||||||||| || ||||||||||| ||||||||||| ||||| ||||||||||||||  ||| |||||| |  || ||   |||    
T  30677211 gagtttgctcctccaaaggtctcaggtttgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctttggctttaaatgggacccc 30677309  T
Q  201 cgcaagtgggcggtggaattggtcccct 228  Q
    |||||||||||||||| |||||||||||    
T  30677310 cgcaagtgggcggtgggattggtcccct 30677337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 46607845 - 46607917
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||| ||||||||  |||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  46607845 gagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag 46607917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 7197392 - 7197338
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacaga 174  Q
    ||||||||| |||||||||||||||||||||||||| |||| ||||| |||||||    
T  7197392 aggtctcaggttcgattccctctgatgccaatttcggtgggtaagtcaatacaga 7197338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 226
Target Start/End: Original strand, 1138614 - 1138738
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaac--ggtcccc 201  Q
    |||||||||||||| ||||||| || ||||| || ||||  ||||||||||| ||| |||||||||||||||  ||| | || | ||||||  || ||      
T  1138614 gagtgtgctcctctcaaggtcttaggttcgaatctctctagtgccaatttcggtggacaagtccatacagagctttgctctgacttagaacagggccctt 1138713  T
Q  202 gcaagtgggcggtggaattggtccc 226  Q
    |||||||||| ||||||||||||||    
T  1138714 gcaagtgggcagtggaattggtccc 1138738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 241
Target Start/End: Original strand, 8077698 - 8077820
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||| ||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||||||||||||||||||    
T  8077698 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacagggcccccgcaagtgggcggtgg 8077796  T
Q  217 aattggtccccttgaattaatcgat 241  Q
     ||||||||||| | ||||||||||    
T  8077797 gattggtcccctcg-attaatcgat 8077820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 39964547 - 39964604
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc 161  Q
    |||||||||||||| |||||||||| || ||||||||||| ||||||||||| |||||    
T  39964547 gagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaatttcggtgggc 39964604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 45859205 - 45859136
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccataca 172  Q
    |||| |||||||||  ||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||    
T  45859205 gagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccataca 45859136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 24217013 - 24217081
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccataca 172  Q
    |||||||||||||| |||||||||| ||||||| ||| || ||||||||||| |||| || ||||||||    
T  24217013 gagtgtgctcctctcaaggtctcaggttcgattacctttggtgccaatttcggtgggtaaatccataca 24217081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 37351623 - 37351551
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||| ||||||||  || ||||||| ||||||||| |||||||||||||||| ||||| ||||||||||||||    
T  37351623 gagtttgctcctccaaatgtctcaggttcgattccttctgatgccaatttcggtgggctaagtccatacagag 37351551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 120 - 259
Target Start/End: Original strand, 17935820 - 17935961
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| ||||||||| |||  ||||||||||| ||||| ||||||||||||||| ||| | |||| |  |||  || ||||||||||||||| |||    
T  17935820 aggtctcaggttcgattccttctagtgccaatttcggtgggctaagtccatacagagt-ttgctctggctttaaacggggcccccgcaagtgggcgatgg 17935918  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccga 259  Q
     |||||||| || | |||| ||||| ||| ||| |||||||||    
T  17935919 gattggtccactcggattagtcgattcttggatcggataccga 17935961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 8254818 - 8254752
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||||||||||| |||| ||||||||||||| ||||| |||  || ||||||||| ||||    
T  8254818 ccccgcaagtgggcggtgggattgatccccttgaattagtcgattcttgaatcggataccgagtttt 8254752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 168251 - 168308
Alignment:
Q  119 aaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||||||||| |||||||||||||| ||||||||||| ||||| |||| |||||||||    
T  168251 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagag 168308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 120 - 241
Target Start/End: Complemental strand, 7766873 - 7766750
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||| ||||||| ||||| ||||||||||||||  ||| | || | |  |||  || |||||||||||||||||||    
T  7766873 aggtctcaggttcgattccctctggtgctaatttcggtgggctaagtccatacagag-cttgctctgactttaaacggggcccccgcaagtgggcggtgg 7766775  T
Q  217 aattggtccccttgaattaatcgat 241  Q
     ||||||||||| | |||| |||||    
T  7766774 gattggtcccctcggattagtcgat 7766750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 16899557 - 16899606
Alignment:
Q  123 tctcagattcgattccctctgatgccaatttcgatgggcaagtccataca 172  Q
    |||||| |||||||||||||| ||||||||||| ||||| ||||||||||    
T  16899557 tctcaggttcgattccctctggtgccaatttcggtgggccagtccataca 16899606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 120 - 257
Target Start/End: Complemental strand, 27455012 - 27454871
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacgg----tccccgcaagtgggcggt 214  Q
    ||||||||| |||||||| ||||||||||||||||| || || ||||||||||||||  ||| | |||| |  |||||     ||||||| |||||||||    
T  27455012 aggtctcaggttcgattcactctgatgccaatttcggtgagctaagtccatacagag-cttgctctggctttaaacgggccccccccgcatgtgggcggt 27454914  T
Q  215 ggaattggtccccttgaattaatcgatcctttgatgggatacc 257  Q
    || ||||||||||| | |||| ||||| ||| ||| |||||||    
T  27454913 gggattggtcccctcggattagtcgattcttggatcggatacc 27454871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 34778470 - 34778531
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccga 259  Q
    |||||||||||| |||||| ||||||||||||| |||| ||||| ||| ||| |||||||||    
T  34778470 ccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccga 34778531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 9500501 - 9500445
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| |||||||| ||||| ||||||||||| ||||| ||||||||||||||    
T  9500501 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagag 9500445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 19034533 - 19034477
Alignment:
Q  119 aaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    ||||| |||| |||||||  ||||| ||||||||||| |||||||||||||||||||    
T  19034533 aaggtttcaggttcgattatctctggtgccaatttcggtgggcaagtccatacagag 19034477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 29057484 - 29057428
Alignment:
Q  119 aaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    |||||||||| |||||||||||||  |||||||||||||||  ||||| ||||||||    
T  29057484 aaggtctcaggttcgattccctcttgtgccaatttcgatggtaaagtctatacagag 29057428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 50202680 - 50202720
Alignment:
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgat 241  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  50202680 cgcaagtgggcggtggaattggtcccctcggattaatcgat 50202720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 20907423 - 20907352
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    |||||||||||||| |||||||||  ||| |||| || || ||||||||||  |||| ||||||||||||||    
T  20907423 gagtgtgctcctctcaaggtctcacgttcaattcactttggtgccaatttcagtgggtaagtccatacagag 20907352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 263
Target Start/End: Original strand, 21726780 - 21726925
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatggg-caagtccatacagagtgttgttttggcctagaacgg--tccccgcaagtgggcggtgg 216  Q
    ||||||||| ||||||||||| || ||||||||||||||||  ||||||||| ||||  ||||| | || |  |||||   |||| ||||||||||||||    
T  21726780 aggtctcaggttcgattccctttggtgccaatttcgatgggttaagtccatatagag-cttgttctagctttaaacgggtcccccacaagtgggcggtgg 21726878  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaattt 263  Q
      ||| ||||||   |||||||||| ||| ||| |||||||||||||    
T  21726879 ggttgatcccctcagattaatcgattcttggatcggataccgaattt 21726925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 37047027 - 37047098
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    |||||||||||||| |||||||||| || ||||||| ||| | | ||||| | ||||| |||||||||||||    
T  37047027 gagtgtgctcctctcaaggtctcaggtttgattccccctggtacaaattttggtgggctagtccatacagag 37047098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 22910002 - 22910068
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||||||||||| ||| ||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  22910002 ccccgcaagtgggcggtgggatttgtcccctcggattagtcgatacttcgatcggataccgagtttt 22910068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 809264 - 809325
Alignment:
Q  111 ctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccataca 172  Q
    |||||||||||||||||| || |||| || ||  || |||||||| ||||||||||||||||    
T  809264 ctcctcttaaggtctcaggtttgattacccctagtgtcaatttcggtgggcaagtccataca 809325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 2272395 - 2272436
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc 161  Q
    ||||||||| || ||||||||||||||||||||||| |||||    
T  2272395 aggtctcaggtttgattccctctgatgccaatttcgctgggc 2272436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 7578460 - 7578513
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccataca 172  Q
    ||||||||| ||||||||||| || ||||||||||| ||||| |||||||||||    
T  7578460 aggtctcaggttcgattccctatggtgccaatttcggtgggctaagtccataca 7578513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 265
Target Start/End: Original strand, 23041655 - 23041720
Alignment:
Q  200 ccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    |||||||||| | |||| ||||||||||| |||||| ||||| ||| ||| ||||||||| |||||    
T  23041655 ccgcaagtggacagtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttta 23041720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 25496645 - 25496584
Alignment:
Q  109 tgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccata 170  Q
    |||||||||||||||||||  |||||||||||||  |||| |||||| || |||||| ||||    
T  25496645 tgctcctcttaaggtctcaagttcgattccctctagtgcctatttcggtgagcaagttcata 25496584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 265
Target Start/End: Complemental strand, 36156034 - 36155887
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatggg-caagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    |||| |||| |||||||||||||| ||||||||||| |||| ||||||||| |||||  ||| ||| |  |  |||  || ||||||| |||||||||||    
T  36156034 aggtgtcaggttcgattccctctggtgccaatttcggtgggccaagtccatgcagag-cttgctttagttttaaacagggcccccgcaggtgggcggtgg 36155936  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
     ||||||||| |  ||||| ||||| ||| ||| ||||||||| |||||    
T  36155935 gattggtcccttcaaattagtcgattcttggatcggataccgagtttta 36155887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 37351519 - 37351458
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccga 259  Q
    |||| |||||||||||||| ||||||||||| | |||| ||| ||||| ||| |||||||||    
T  37351519 ccccacaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccga 37351458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 46113548 - 46113495
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccataca 172  Q
    ||||||||| |||||||||||||| | ||||||||| ||||| |||||||||||    
T  46113548 aggtctcaggttcgattccctctggtaccaatttcggtgggctaagtccataca 46113495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 7946895 - 7946951
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||  |||||||||||||| ||||||||||| ||||| ||||| ||||||||    
T  7946895 aggtctcaagttcgattccctctggtgccaatttcggtgggctaagtctatacagag 7946951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 23232411 - 23232355
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||| |||| ||||||||||||||  |||||||||| ||||| ||||||||||||||    
T  23232411 aggtttcaggttcgattccctctggcgccaatttcggtgggctaagtccatacagag 23232355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 49101802 - 49101731
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||||||||||||| ||||||| | ||| ||||||| ||| |||||| |||| ||||| ||||||||||||||    
T  49101802 gagtgtgctcctctcaaggtcttacatttgattccccctggtgccaa-ttcggtgggctaagtccatacagag 49101731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 104 - 245
Target Start/End: Complemental strand, 17149618 - 17149475
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaa--cggtcccc 201  Q
    |||||||||||||| |||||||||| |||||||||||||| ||| ||||||| | |||||||||||||||||  ||| |||||| |  ||   || ||||    
T  17149618 gagtgtgctcctctcaaggtctcaggttcgattccctctggtgctaatttcggttggcaagtccatacagagccttgctttggctttaaatggggccccc 17149519  T
Q  202 gcaagtgggcggtggaattggtccccttgaattaatcgatcctt 245  Q
    |||||||  |||||| ||||||||||| |||||| ||| |||||    
T  17149518 gcaagtgaacggtgggattggtcccctcgaattagtcggtcctt 17149475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 9208287 - 9208409
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaa--cggtcccc 201  Q
    |||| ||||||||| |||||||||| |||||||||| ||| ||||||||||| |||||||||||||||||||  ||| |||||| |  ||   || ||||    
T  9208287 gagtttgctcctctcaaggtctcaggttcgattccccctggtgccaatttcggtgggcaagtccatacagagccttgctttggctttaaatggggccccc 9208386  T
Q  202 gcaagtgggcggtggaattggtc 224  Q
    ||||||||||||||| |||||||    
T  9208387 gcaagtgggcggtgggattggtc 9208409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 104 - 264
Target Start/End: Complemental strand, 15360260 - 15360098
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccc 200  Q
    |||| ||||||||  |||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||    
T  15360260 gagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccc 15360162  T
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||| |||||||||| ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  15360161 cgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 15360098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 3222781 - 3222636
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac-ggtccccgcaagtgggcggtgga 217  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | || | |  ||| || |||||||||||||||||||     
T  3222781 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctgtctttaaacggggccccgcaagtgggcggtggg 3222683  T
Q  218 attggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  3222682 attggtcccctcggattagtcgattcttggatcggataccgagtttt 3222636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 264
Target Start/End: Original strand, 34147399 - 34147543
Alignment:
Q  122 gtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacgg--tccccgcaagtgggcggtggaa 218  Q
    ||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||||   ||||||||||||||||||| |    
T  34147399 gtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacgggccccccgcaagtgggcggtggga 34147497  T
Q  219 ttggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  34147498 ttggtcccctcggattagtcgattcttggatcggataccgagtttt 34147543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 264
Target Start/End: Original strand, 34160015 - 34160159
Alignment:
Q  122 gtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacgg--tccccgcaagtgggcggtggaa 218  Q
    ||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||||   ||||||||||||||||||| |    
T  34160015 gtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacgggccccccgcaagtgggcggtggga 34160113  T
Q  219 ttggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  34160114 ttggtcccctcggattagtcgattcttggatcggataccgagtttt 34160159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 5360217 - 5360071
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacgg--tccccgcaagtgggcggtgg 216  Q
    ||||||||| ||||||||||||| |||||||||||| ||||| ||||||||||||||  ||| | || | |  |||||   |||| ||||||||||||||    
T  5360217 aggtctcaggttcgattccctctaatgccaatttcggtgggctaagtccatacagag-cttgctctgactttaaacggaacccccacaagtgggcggtgg 5360119  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| |||||| ||||| ||| ||| ||||||||| ||||    
T  5360118 gattggtcccctcgaattagtcgattcttagatcggataccgagtttt 5360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 264
Target Start/End: Original strand, 28672102 - 28672264
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggtcccc- 201  Q
    |||| |||||||||  |||||| || |||||||||||||| || |||||| | ||||| ||||||||||||||  |||||||||| |  ||||| ||||     
T  28672102 gagtttgctcctctagaggtcttaggttcgattccctctggtgtcaattttggtgggctaagtccatacagagc-ttgttttggctttaaacgggcccct 28672200  T
Q  202 -gcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||||||| ||||||||||| | |||| ||||| ||| |||  |||||||| ||||    
T  28672201 cgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagtttt 28672264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 241
Target Start/End: Original strand, 12390476 - 12390599
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||||||||||||||||||    
T  12390476 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacagggcccccgcaagtgggcggtgg 12390574  T
Q  217 aattggtccccttgaattaatcgat 241  Q
     ||||||||||| | |||| |||||    
T  12390575 gattggtcccctcggattagtcgat 12390599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 654292 - 654146
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  ||  ||||||||||||||||||    
T  654292 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggctcccgcaagtgggcggtgg 654194  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| |||||  || ||| ||||||||| ||||    
T  654193 gattggtcccctcggattagtcgattattggatcggataccgagtttt 654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 1344986 - 1345132
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggtcccc--gcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||  ||||| ||||||||||| ||  ||| | |||| |  ||||| ||||  |||||||| ||||||    
T  1344986 aggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacaaagc-ttgctctggctttaaacgggccccccgcaagtggacggtgg 1345084  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||||| |||| ||||| ||| ||| ||||||||| ||||    
T  1345085 gattggtccccttggattagtcgattcttggatcggataccgagtttt 1345132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 259
Target Start/End: Original strand, 10377750 - 10377908
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagagtgttgttttggcctagaacgg---tccc 200  Q
    |||||||||| | | |||||||||| ||| ||||||| || ||||||||||| |||||||||||||||| ||  ||| | || | || |||||    |||    
T  10377750 gagtgtgctcatgtcaaggtctcaggttcaattccctatggtgccaatttcggtgggcaagtccatacatagctttgctctgacttaaaacggggccccc 10377849  T
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccga 259  Q
    | |||||||||||||| ||||||||||| | | || ||| ||||| ||| |||||||||    
T  10377850 cacaagtgggcggtggcattggtcccctcggagtagtcggtccttggattggataccga 10377908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 259
Target Start/End: Original strand, 9239026 - 9239167
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||  ||||||||| ||||  ||| |||||| |  || ||   |||||||||||||||||||    
T  9239026 aggtctcaggttcgattccctctggtgccaatttcggtgggttaagtccatatagagc-ttgctttggctttaaatggggcccccgcaagtgggcggtgg 9239124  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccga 259  Q
     ||||||||||| | |||| ||||| ||| ||| |||||||||    
T  9239125 gattggtcccctcggattagtcgattcttggatcggataccga 9239167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 21148656 - 21148511
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac-ggtccccgcaagtgggcggtgga 217  Q
    ||||||||  |||||||||||||  ||||||||||||||||| ||||||||||||||  ||| | || | |  ||| || |||||||||||||||||||     
T  21148656 aggtctcaagttcgattccctctagtgccaatttcgatgggctaagtccatacagag-cttgctctgactttaaacggggccccgcaagtgggcggtggg 21148558  T
Q  218 attggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||||||||| | |||| ||||| |||  || ||||||||| ||||    
T  21148557 attggtcccctcggattagtcgattcttgaatcggataccgagtttt 21148511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 21182361 - 21182419
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggca 162  Q
    |||||||||||||| ||| ||| |||||||||||||| |||||||||||||| ||||||    
T  21182361 gagtgtgctcctctcaagctctgagattcgattccctgtgatgccaatttcggtgggca 21182419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 8479347 - 8479412
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccat 169  Q
    |||||||||||||||||| | |||| ||||||| |||||| || |||||||| |||||||||||||    
T  8479347 gagtgtgctcctcttaagatttcaggttcgatttcctctggtgtcaatttcggtgggcaagtccat 8479412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 241
Target Start/End: Original strand, 11448922 - 11449045
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||| ||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||||||||||||||||||    
T  11448922 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccccgcaagtgggcggtgg 11449020  T
Q  217 aattggtccccttgaattaatcgat 241  Q
     ||||||||||| | |||| |||||    
T  11449021 gattggtcccctcggattagtcgat 11449045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 28028570 - 28028629
Alignment:
Q  102 ttgagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc 161  Q
    ||||||| |||||||| |||||||||  |||||||| | |||||||||||||||||||||    
T  28028570 ttgagtgagctcctctcaaggtctcatgttcgattctccctgatgccaatttcgatgggc 28028629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 9583403 - 9583464
Alignment:
Q  99 atattgagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatggg 160  Q
    ||||||||||||||||||| ||||||||   |||||||| ||||| ||||||||||| ||||    
T  9583403 atattgagtgtgctcctctcaaggtctccagttcgattctctctggtgccaatttcggtggg 9583464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 14504151 - 14504082
Alignment:
Q  195 ggtccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    |||||||||||||||||||||| |||| ||| || |||||| |||||||||  || ||||||||| ||||    
T  14504151 ggtccccgcaagtgggcggtgggattgatcctctcgaattagtcgatccttgtatcggataccgagtttt 14504082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 33499509 - 33499578
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattc-gattccctctgatgccaatttcgatgggcaagtccataca 172  Q
    |||| ||||||||| |||||||||| ||| ||||||||||| || |||||||| ||||| ||||||||||    
T  33499509 gagtttgctcctctcaaggtctcaggttcagattccctctggtgtcaatttcggtgggctagtccataca 33499578  T

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Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 12591672 - 12591744
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    |||| ||||||||  |||||||||| |||||||||||||  ||||||||||  ||||| ||||||||||||||    
T  12591672 gagtttgctcctccaaaggtctcaggttcgattccctctcgtgccaatttcagtgggctaagtccatacagag 12591744  T

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Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 14212943 - 14212999
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||| |||||||||||||| ||||||||| ||||||| ||||||||| ||||    
T  14212943 aggtctcaggttcgattccctctggtgccaattttgatgggctaagtccatatagag 14212999  T

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Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 6691584 - 6691533
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcg 155  Q
    |||||||||||||| |||||||||| |||||||| ||| | |||||||||||    
T  6691584 gagtgtgctcctctcaaggtctcaggttcgattctctccggtgccaatttcg 6691533  T

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Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 11007296 - 11007355
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggatacc 257  Q
    ||||||||||||||||||| ||||| ||||| | |||| ||||| ||||||| |||||||    
T  11007296 ccccgcaagtgggcggtgggattggccccctcggattagtcgattctttgatcggatacc 11007355  T

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Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 3779381 - 3779431
Alignment:
Q  104 gagtgtgctcct-cttaaggtctcagattcgattccctctgatgccaattt 153  Q
    |||||||||||| || |||||||||||||| ||||||||||||| ||||||    
T  3779381 gagtgtgctccttctcaaggtctcagattcaattccctctgatgtcaattt 3779431  T

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Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 50
Target Start/End: Original strand, 19146190 - 19146220
Alignment:
Q  20 aatgacatcaacgacaatctttattatagaa 50  Q
    |||||||||||||||||||||||||||||||    
T  19146190 aatgacatcaacgacaatctttattatagaa 19146220  T

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Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 11103468 - 11103419
Alignment:
Q  105 agtgtgctcctc-ttaaggtctcagattcgattccctctgatgccaattt 153  Q
    |||||||||||| |||||||||| |||||||||| ||||| |||||||||    
T  11103468 agtgtgctcctccttaaggtctccgattcgattctctctggtgccaattt 11103419  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 6164366 - 6164422
Alignment:
Q  119 aaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    |||||||||| ||||| |||||||   || ||||||||| |||||||||||||||||    
T  6164366 aaggtctcaggttcgactccctctagcgctaatttcgataggcaagtccatacagag 6164422  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 152
Target Start/End: Original strand, 22576118 - 22576150
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatt 152  Q
    |||||||||||||||||||||||| ||||||||    
T  22576118 aggtctcagattcgattccctctggtgccaatt 22576150  T

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Target: scaffold0576 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 104 - 264
Target Start/End: Complemental strand, 5244 - 5082
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccc 200  Q
    |||| ||||||||  |||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||    
T  5244 gagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccc 5146  T
Q  201 cgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
    ||||| |||||||||| ||||||||||| | |||| ||||| ||| ||| ||||||||| ||||    
T  5145 cgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 5082  T

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Target: scaffold0070 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 40376 - 40521
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaac--ggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  |||  || |||||||||||||||||||    
T  40376 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggctttaaacggggcccccgcaagtgggcggtgg 40474  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     |||||| |||| | |||| ||||| ||| ||| ||||||||| ||||    
T  40475 gattggt-ccctcggattagtcgattcttggatcggataccgagtttt 40521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 161860 - 162006
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaa--cggtccccgcaagtgggcggtgg 216  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||| | |||| |  ||   || |||||||||||||||||||    
T  161860 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag-cttgctctggcttttaatggggcccccgcaagtgggcggtgg 161958  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| ||||| ||| |||  |||||||| ||||    
T  161959 gattggtcccctcggattagtcgattcttggatcagataccgagtttt 162006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 97523 - 97456
Alignment:
Q  109 tgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagag 175  Q
    ||||||||  |||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  97523 tgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagag 97456  T

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Target: scaffold0717 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 104 - 47
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagt 176  Q
    ||||||||| ||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  104 aggtctcaggttcgattccctcttatgtcaatttcgatgggctaagtccatacagagt 47  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 1202 - 1057
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaa--cggtccccgcaagtgggcggtgg 216  Q
    ||||||||| ||||||||||||||  |||||||||| ||||| ||||||||||||||  ||| | |||| |  ||   || |||||||||||| ||||||    
T  1202 aggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagag-cttgctctggctttaaatggggcccccgcaagtggacggtgg 1104  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| |||||| ||||| | ||||| ||||||||| ||||    
T  1103 gattggtcccctcgaattagtcgattc-ttgatcggataccgagtttt 1057  T

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Target: scaffold0366 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 264
Target Start/End: Complemental strand, 9445 - 9300
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaa--cggtccccgcaagtgggcggtgg 216  Q
    ||||||||| ||||||||||||||  |||||||||| ||||| ||||||||||||||  ||| | |||| |  ||   || |||||||||||| ||||||    
T  9445 aggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagag-cttgctctggctttaaatggggcccccgcaagtggacggtgg 9347  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| |||||| ||||| | ||||| ||||||||| ||||    
T  9346 gattggtcccctcgaattagtcgattc-ttgatcggataccgagtttt 9300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 39143 - 39289
Alignment:
Q  120 aggtctcagattcgattccctctgatgccaatttcgatgggcaa-gtccatacagagtgttgttttggcctagaacggt--ccccgcaagtgggcggtgg 216  Q
    ||||||||  |||||||||||||| ||||||||||| ||||| | |||||||||||   ||||| |||| |  |||||   |||||||||||||||||||    
T  39143 aggtctcaagttcgattccctctggtgccaatttcggtgggctatgtccatacagaac-ttgttctggctttaaacggggcccccgcaagtgggcggtgg 39241  T
Q  217 aattggtccccttgaattaatcgatcctttgatgggataccgaatttt 264  Q
     ||||||||||| | |||| ||||| ||| |||  |||||||| ||||    
T  39242 gattggtcccctcggattagtcgattcttggatcagataccgagtttt 39289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 66885 - 66952
Alignment:
Q  198 ccccgcaagtgggcggtggaattggtccccttgaattaatcgatcctttgatgggataccgaatttta 265  Q
    ||||||||||||||||||| ||||||||||| | |||| ||| ||||| ||| ||||||||| |||||    
T  66885 ccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttta 66952  T

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Target: scaffold0217 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 257
Target Start/End: Complemental strand, 7452 - 7316
Alignment:
Q  123 tctcagattcgattccctctgatgccaatttcgatgggc-aagtccatacagagtgttgttttggcctagaacggt--ccccgcaagtgggcggtggaat 219  Q
    |||||| |||||||||||| | ||||||||||| ||||| ||||||||||||||  || | | ||| |  |||||   ||||||||||||||||||| ||    
T  7452 tctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagctttctct-ggctttaaacggggcccccgcaagtgggcggtgggat 7354  T
Q  220 tggtccccttgaattaatcgatcctttgatgggatacc 257  Q
    ||||||||| | |||| ||||| ||| ||| |||||||    
T  7353 tggtcccctcggattagtcgattcttggatcggatacc 7316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 175
Target Start/End: Complemental strand, 29303 - 29233
Alignment:
Q  105 agtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccatacagag 175  Q
    |||||| |||||| ||||||| || |||||||||| ||||||||| ||||| | || ||||||||||||||    
T  29303 agtgtgttcctctcaaggtcttaggttcgattcccgctgatgccattttcggtcggtaagtccatacagag 29233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 123187 - 123146
Alignment:
Q  130 ttcgattccctctgatgccaatttcgatgggcaagtccatac 171  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  123187 ttcgattccctctgttgccaatttcggtgggcaagtccatac 123146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 20272 - 20326
Alignment:
Q  119 aaggtctcagattcgattccctctgatgccaatttcgatgggc-aagtccataca 172  Q
    |||||||||| || ||||||||||| |||||||||| |||||| |||||||||||    
T  20272 aaggtctcaggtttgattccctctggtgccaatttcaatgggctaagtccataca 20326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 81597 - 81548
Alignment:
Q  105 agtgtgctcctctt-aaggtctcagattcgattccctctgatgccaattt 153  Q
    |||||||||||| | ||||||||||||||||||| | |||||||||||||    
T  81597 agtgtgctcctcctcaaggtctcagattcgattctccctgatgccaattt 81548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 53077 - 53145
Alignment:
Q  104 gagtgtgctcctcttaaggtctcagattcgattccctctgatgccaatttcgatgggcaagtccataca 172  Q
    |||||||||||||| || |  || ||||| ||| |||||| | ||||||||||||| ||||||||||||    
T  53077 gagtgtgctcctctcaaaggttcggattcaatttcctctggtaccaatttcgatggacaagtccataca 53145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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