View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6392_low_47 (Length: 358)

Name: NF6392_low_47
Description: NF6392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6392_low_47
NF6392_low_47
[»] chr6 (38 HSPs)
chr6 (20-343)||(26661298-26661621)
chr6 (20-343)||(26767269-26767592)
chr6 (14-220)||(21593138-21593344)
chr6 (1-220)||(3809186-3809402)
chr6 (91-220)||(22964080-22964209)
chr6 (91-220)||(23824184-23824313)
chr6 (91-212)||(24435566-24435687)
chr6 (1-120)||(26830601-26830721)
chr6 (91-220)||(31979899-31980028)
chr6 (1-108)||(17762571-17762678)
chr6 (91-212)||(18234465-18234587)
chr6 (127-220)||(603622-603715)
chr6 (131-220)||(9183399-9183488)
chr6 (95-232)||(26954656-26954792)
chr6 (91-214)||(10076783-10076906)
chr6 (91-169)||(31086110-31086189)
chr6 (91-169)||(5017133-5017211)
chr6 (127-220)||(5571850-5571943)
chr6 (153-220)||(17759427-17759494)
chr6 (4-54)||(22425306-22425356)
chr6 (1-117)||(25072759-25072876)
chr6 (91-216)||(33211534-33211658)
chr6 (93-169)||(16452679-16452756)
chr6 (93-169)||(16452790-16452867)
chr6 (91-220)||(21272575-21272704)
chr6 (1-40)||(2973417-2973456)
chr6 (93-198)||(5406548-5406655)
chr6 (93-198)||(5410873-5410980)
chr6 (91-198)||(30834884-30834994)
chr6 (1-42)||(5043278-5043319)
chr6 (93-220)||(5411583-5411712)
chr6 (106-198)||(5413812-5413905)
chr6 (93-168)||(31405024-31405100)
chr6 (38-108)||(603553-603623)
chr6 (131-220)||(5407297-5407387)
chr6 (91-209)||(24714754-24714872)
chr6 (91-198)||(33160702-33160811)
chr6 (257-301)||(21593058-21593102)
[»] chr4 (63 HSPs)
chr4 (1-214)||(50674323-50674536)
chr4 (1-220)||(6655428-6655647)
chr4 (1-220)||(26363737-26363956)
chr4 (1-220)||(27417428-27417647)
chr4 (1-220)||(40630456-40630675)
chr4 (91-220)||(34570763-34570892)
chr4 (1-220)||(54882512-54882711)
chr4 (98-220)||(9927817-9927939)
chr4 (42-220)||(41639037-41639215)
chr4 (91-216)||(37740320-37740445)
chr4 (1-210)||(50263175-50263383)
chr4 (91-220)||(36314816-36314945)
chr4 (91-220)||(36329025-36329154)
chr4 (1-220)||(2209192-2209399)
chr4 (91-220)||(5429370-5429499)
chr4 (91-198)||(54200255-54200362)
chr4 (91-220)||(8689082-8689211)
chr4 (91-220)||(25861618-25861748)
chr4 (92-220)||(5268785-5268914)
chr4 (91-220)||(54867561-54867690)
chr4 (92-220)||(5143644-5143772)
chr4 (91-220)||(6743001-6743130)
chr4 (113-220)||(12745787-12745895)
chr4 (1-105)||(55085843-55085946)
chr4 (1-108)||(46570023-46570130)
chr4 (91-169)||(16622931-16623008)
chr4 (146-220)||(35661911-35661985)
chr4 (206-295)||(8653111-8653200)
chr4 (206-295)||(8664918-8665007)
chr4 (193-268)||(10071403-10071477)
chr4 (113-220)||(46570115-46570222)
chr4 (95-220)||(5148064-5148189)
chr4 (91-169)||(16628510-16628587)
chr4 (139-220)||(52095757-52095839)
chr4 (91-198)||(29254206-29254313)
chr4 (105-220)||(36994250-36994365)
chr4 (146-220)||(26176028-26176102)
chr4 (1-53)||(8653239-8653291)
chr4 (1-53)||(8665046-8665098)
chr4 (2-53)||(10071524-10071575)
chr4 (146-220)||(56179028-56179103)
chr4 (91-225)||(3909782-3909915)
chr4 (1-54)||(22883230-22883283)
chr4 (1-54)||(22934894-22934947)
chr4 (1-53)||(33989501-33989553)
chr4 (1-64)||(41964044-41964107)
chr4 (127-220)||(3777966-3778060)
chr4 (1-43)||(12073042-12073084)
chr4 (93-169)||(52083007-52083084)
chr4 (93-169)||(52094014-52094091)
chr4 (1-41)||(46703152-46703192)
chr4 (1-60)||(3785722-3785781)
chr4 (146-220)||(5370479-5370554)
chr4 (127-170)||(5396327-5396370)
chr4 (132-219)||(24968801-24968888)
chr4 (2-45)||(35370816-35370859)
chr4 (2-60)||(35369913-35369971)
chr4 (1-42)||(379028-379069)
chr4 (257-302)||(26363656-26363701)
chr4 (5-54)||(26699929-26699978)
chr4 (146-217)||(12739942-12740014)
chr4 (146-217)||(12748148-12748220)
chr4 (16-60)||(25723708-25723752)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-220)||(11030-11249)
[»] chr8 (31 HSPs)
chr8 (1-220)||(42435468-42435687)
chr8 (1-198)||(4283040-4283237)
chr8 (91-220)||(30143032-30143161)
chr8 (1-220)||(22976006-22976225)
chr8 (91-220)||(4731348-4731477)
chr8 (94-220)||(15212476-15212602)
chr8 (91-220)||(43036113-43036242)
chr8 (113-220)||(27810988-27811095)
chr8 (11-220)||(40221236-40221425)
chr8 (91-220)||(12702987-12703117)
chr8 (113-220)||(4733515-4733622)
chr8 (91-220)||(5702065-5702195)
chr8 (91-220)||(1345718-1345848)
chr8 (91-220)||(1746566-1746697)
chr8 (113-219)||(11383479-11383585)
chr8 (93-220)||(34256854-34256983)
chr8 (1-54)||(44353433-44353486)
chr8 (97-220)||(4743548-4743672)
chr8 (93-220)||(19175318-19175445)
chr8 (91-167)||(33351893-33351969)
chr8 (93-218)||(34254678-34254805)
chr8 (1-54)||(11383624-11383677)
chr8 (91-171)||(23799211-23799291)
chr8 (256-302)||(4731267-4731313)
chr8 (139-220)||(42497904-42497986)
chr8 (4-53)||(20686537-20686586)
chr8 (127-171)||(4696263-4696307)
chr8 (112-220)||(10014849-10014957)
chr8 (91-219)||(31217947-31218077)
chr8 (91-198)||(17982364-17982473)
chr8 (91-198)||(19948669-19948778)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-220)||(80760-80979)
[»] chr3 (65 HSPs)
chr3 (1-220)||(4569423-4569642)
chr3 (1-220)||(43404210-43404429)
chr3 (1-220)||(55302442-55302660)
chr3 (12-220)||(36018334-36018530)
chr3 (1-219)||(6096076-6096295)
chr3 (1-220)||(43402267-43402486)
chr3 (1-220)||(54593176-54593395)
chr3 (1-220)||(31340518-31340739)
chr3 (1-220)||(40912809-40913029)
chr3 (1-220)||(49199948-49200147)
chr3 (91-220)||(29812753-29812882)
chr3 (91-220)||(5236806-5236935)
chr3 (91-220)||(40592357-40592486)
chr3 (91-220)||(29810558-29810687)
chr3 (186-295)||(30235616-30235724)
chr3 (91-220)||(8127012-8127141)
chr3 (127-220)||(44331259-44331352)
chr3 (91-215)||(1735884-1736008)
chr3 (91-182)||(24694779-24694870)
chr3 (113-220)||(34490704-34490811)
chr3 (91-220)||(8370064-8370193)
chr3 (107-220)||(46173206-46173318)
chr3 (1-61)||(28074248-28074308)
chr3 (93-212)||(40845037-40845157)
chr3 (92-220)||(48438598-48438727)
chr3 (91-220)||(16264731-16264860)
chr3 (91-220)||(36029475-36029605)
chr3 (91-220)||(39032130-39032259)
chr3 (91-169)||(47923530-47923608)
chr3 (93-220)||(7761954-7762082)
chr3 (91-220)||(44331796-44331925)
chr3 (91-169)||(30709423-30709501)
chr3 (93-220)||(7764141-7764270)
chr3 (91-220)||(5258492-5258623)
chr3 (91-220)||(9636476-9636607)
chr3 (2-53)||(26323991-26324042)
chr3 (91-220)||(27027088-27027218)
chr3 (91-220)||(40735117-40735248)
chr3 (208-295)||(47303763-47303850)
chr3 (93-171)||(23410681-23410759)
chr3 (1-54)||(5434356-5434409)
chr3 (127-215)||(27038459-27038548)
chr3 (2-53)||(47303891-47303942)
chr3 (111-220)||(21711603-21711713)
chr3 (91-169)||(40734239-40734317)
chr3 (1-120)||(30235696-30235816)
chr3 (12-105)||(34795456-34795549)
chr3 (93-220)||(45094853-45094982)
chr3 (1-43)||(34490862-34490904)
chr3 (1-43)||(41819998-41820040)
chr3 (133-220)||(16498756-16498840)
chr3 (91-168)||(25929023-25929100)
chr3 (257-302)||(31340775-31340820)
chr3 (11-60)||(35139201-35139250)
chr3 (256-302)||(34490623-34490669)
chr3 (92-170)||(37726058-37726135)
chr3 (256-302)||(44331177-44331223)
chr3 (91-137)||(51398587-51398633)
chr3 (175-220)||(3393296-3393341)
chr3 (133-170)||(37408199-37408236)
chr3 (1-54)||(39127197-39127250)
chr3 (1-42)||(46860120-46860161)
chr3 (146-219)||(51398517-51398590)
chr3 (133-169)||(27974579-27974615)
chr3 (127-171)||(35925908-35925952)
[»] scaffold0466 (1 HSPs)
scaffold0466 (1-171)||(6848-7019)
[»] chr7 (53 HSPs)
chr7 (1-219)||(6360389-6360607)
chr7 (1-220)||(32358313-32358532)
chr7 (91-220)||(47674292-47674421)
chr7 (91-220)||(47676485-47676614)
chr7 (91-220)||(27347614-27347742)
chr7 (1-123)||(48599801-48599923)
chr7 (91-220)||(2647283-2647412)
chr7 (91-220)||(14070182-14070312)
chr7 (91-220)||(14380210-14380340)
chr7 (91-220)||(4585851-4585980)
chr7 (91-215)||(18126339-18126463)
chr7 (91-219)||(26417004-26417132)
chr7 (91-198)||(2761651-2761758)
chr7 (91-220)||(48489120-48489249)
chr7 (1-137)||(29608296-29608432)
chr7 (1-108)||(2361448-2361555)
chr7 (1-114)||(30814343-30814456)
chr7 (91-220)||(4538900-4539029)
chr7 (113-220)||(2389764-2389871)
chr7 (91-198)||(48491290-48491397)
chr7 (91-171)||(21983625-21983704)
chr7 (91-215)||(33332041-33332165)
chr7 (91-230)||(496343-496481)
chr7 (91-220)||(23554729-23554860)
chr7 (127-220)||(43863951-43864044)
chr7 (1-120)||(4512866-4512985)
chr7 (1-61)||(34311194-34311254)
chr7 (91-191)||(46515923-46516023)
chr7 (91-220)||(49092071-49092203)
chr7 (91-198)||(1113368-1113475)
chr7 (1-64)||(4509174-4509237)
chr7 (1-64)||(4511016-4511079)
chr7 (91-220)||(4796255-4796384)
chr7 (1-61)||(6431602-6431662)
chr7 (1-61)||(22269605-22269665)
chr7 (93-220)||(19495659-19495789)
chr7 (91-219)||(6570284-6570412)
chr7 (1-40)||(2389934-2389973)
chr7 (91-220)||(4178464-4178595)
chr7 (1-54)||(22328877-22328930)
chr7 (133-220)||(30026391-30026477)
chr7 (92-170)||(2479719-2479796)
chr7 (92-170)||(44847762-44847839)
chr7 (92-170)||(47264026-47264103)
chr7 (94-220)||(79773-79902)
chr7 (91-171)||(21989290-21989369)
chr7 (1-40)||(3258647-3258686)
chr7 (91-137)||(31733311-31733357)
chr7 (146-212)||(31733354-31733420)
chr7 (260-302)||(48491208-48491250)
chr7 (93-169)||(24515110-24515187)
chr7 (257-302)||(34311334-34311379)
chr7 (91-123)||(30025081-30025113)
[»] chr1 (47 HSPs)
chr1 (1-220)||(37033546-37033765)
chr1 (1-190)||(13547566-13547754)
chr1 (1-190)||(13549477-13549665)
chr1 (1-218)||(193086-193303)
chr1 (91-220)||(44454849-44454978)
chr1 (91-220)||(31658928-31659057)
chr1 (1-198)||(29135762-29135939)
chr1 (13-220)||(37879400-37879587)
chr1 (91-220)||(28220575-28220705)
chr1 (91-220)||(49918039-49918168)
chr1 (91-198)||(30476797-30476904)
chr1 (91-212)||(13598782-13598904)
chr1 (91-220)||(28223770-28223900)
chr1 (91-219)||(1833212-1833341)
chr1 (91-220)||(10924913-10925042)
chr1 (206-306)||(42298542-42298642)
chr1 (91-220)||(4552997-4553126)
chr1 (1-61)||(19754122-19754182)
chr1 (1-61)||(47255811-47255871)
chr1 (1-54)||(6808084-6808137)
chr1 (141-225)||(3156552-3156636)
chr1 (1-120)||(19752258-19752377)
chr1 (113-220)||(11348191-11348298)
chr1 (1-108)||(11348283-11348389)
chr1 (1-64)||(34602816-34602879)
chr1 (1-64)||(34603204-34603267)
chr1 (99-220)||(37070157-37070279)
chr1 (1-120)||(31928277-31928397)
chr1 (93-220)||(3206675-3206805)
chr1 (91-220)||(3282089-3282218)
chr1 (91-169)||(29652195-29652273)
chr1 (91-171)||(21536206-21536285)
chr1 (1-44)||(7482708-7482751)
chr1 (93-220)||(20762361-20762490)
chr1 (131-220)||(3189040-3189131)
chr1 (131-220)||(3197857-3197948)
chr1 (92-170)||(13604259-13604336)
chr1 (2-60)||(41135452-41135510)
chr1 (91-198)||(13316666-13316775)
chr1 (133-220)||(13659694-13659778)
chr1 (1-54)||(42298452-42298505)
chr1 (2-39)||(47114825-47114862)
chr1 (93-169)||(15820048-15820124)
chr1 (131-219)||(22819852-22819940)
chr1 (92-171)||(16455385-16455464)
chr1 (1-39)||(28242041-28242079)
chr1 (138-171)||(16124295-16124328)
[»] chr2 (38 HSPs)
chr2 (1-216)||(35447361-35447575)
chr2 (91-220)||(2837193-2837322)
chr2 (91-220)||(34389233-34389362)
chr2 (91-220)||(36318358-36318488)
chr2 (91-220)||(20522604-20522733)
chr2 (91-215)||(14698600-14698724)
chr2 (1-115)||(45726507-45726621)
chr2 (91-220)||(21630327-21630456)
chr2 (186-300)||(1632300-1632413)
chr2 (92-220)||(33528209-33528338)
chr2 (91-215)||(10706843-10706967)
chr2 (127-215)||(17865595-17865684)
chr2 (1-61)||(1632209-1632269)
chr2 (91-220)||(36988423-36988554)
chr2 (1-104)||(42262087-42262190)
chr2 (91-220)||(45099444-45099575)
chr2 (91-220)||(39483258-39483388)
chr2 (91-215)||(23078062-23078186)
chr2 (91-220)||(33118517-33118646)
chr2 (1-53)||(7450940-7450992)
chr2 (93-198)||(5723604-5723711)
chr2 (91-220)||(8389733-8389864)
chr2 (146-220)||(39284587-39284661)
chr2 (93-198)||(2334767-2334874)
chr2 (146-220)||(29867569-29867644)
chr2 (91-169)||(36206013-36206092)
chr2 (92-170)||(28258814-28258891)
chr2 (91-198)||(4503480-4503589)
chr2 (16-105)||(24397651-24397740)
chr2 (1-61)||(17450222-17450282)
chr2 (208-268)||(17629022-17629082)
chr2 (154-220)||(6595406-6595473)
chr2 (91-169)||(13569712-13569789)
chr2 (1-43)||(33647817-33647859)
chr2 (91-120)||(7450877-7450906)
chr2 (12-45)||(44750240-44750273)
chr2 (257-302)||(45726415-45726460)
chr2 (91-123)||(39284672-39284704)
[»] chr5 (36 HSPs)
chr5 (1-198)||(27015026-27015223)
chr5 (1-162)||(38746535-38746696)
chr5 (1-220)||(5057521-5057739)
chr5 (91-220)||(42426584-42426713)
chr5 (91-220)||(13487895-13488022)
chr5 (91-220)||(32636513-32636643)
chr5 (91-198)||(19806118-19806225)
chr5 (91-218)||(16650971-16651098)
chr5 (1-108)||(40146843-40146952)
chr5 (91-220)||(11916557-11916687)
chr5 (113-198)||(535615-535700)
chr5 (127-198)||(39468917-39468988)
chr5 (91-220)||(13239442-13239572)
chr5 (91-212)||(14520612-14520733)
chr5 (12-61)||(16642365-16642414)
chr5 (92-220)||(31004739-31004868)
chr5 (139-220)||(40146739-40146820)
chr5 (1-61)||(213099-213159)
chr5 (91-171)||(12083813-12083892)
chr5 (146-220)||(42428822-42428896)
chr5 (151-220)||(38746460-38746529)
chr5 (91-163)||(16649972-16650044)
chr5 (1-60)||(30792872-30792931)
chr5 (146-220)||(30683312-30683386)
chr5 (131-220)||(37438835-37438925)
chr5 (1-54)||(14689885-14689938)
chr5 (1-54)||(30802579-30802632)
chr5 (93-198)||(25412473-25412580)
chr5 (2-41)||(27638092-27638131)
chr5 (1-44)||(28277963-28278006)
chr5 (91-137)||(533542-533588)
chr5 (91-198)||(13342772-13342881)
chr5 (91-169)||(30182329-30182409)
chr5 (92-170)||(9352971-9353048)
chr5 (1-55)||(35615808-35615862)
chr5 (133-170)||(36931986-36932023)
[»] scaffold0066 (1 HSPs)
scaffold0066 (91-218)||(20764-20891)
[»] scaffold0006 (4 HSPs)
scaffold0006 (91-212)||(6067-6189)
scaffold0006 (92-220)||(2876-3005)
scaffold0006 (92-170)||(132916-132993)
scaffold0006 (133-220)||(149455-149539)
[»] scaffold0176 (2 HSPs)
scaffold0176 (113-220)||(17635-17742)
scaffold0176 (5-54)||(18481-18530)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-104)||(490922-491025)
scaffold0002 (91-220)||(434221-434353)
[»] scaffold0087 (2 HSPs)
scaffold0087 (92-225)||(36413-36546)
scaffold0087 (92-170)||(43598-43675)
[»] scaffold0016 (1 HSPs)
scaffold0016 (131-218)||(114278-114365)
[»] scaffold0098 (1 HSPs)
scaffold0098 (92-170)||(45582-45659)
[»] scaffold0140 (1 HSPs)
scaffold0140 (133-170)||(8054-8091)


Alignment Details
Target: chr6 (Bit Score: 292; Significance: 1e-164; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 20 - 343
Target Start/End: Complemental strand, 26661621 - 26661298
Alignment:
Q  20 gtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  26661621 gtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcataatcatgtcacgttttcccaaatcgt 26661522  T
Q  120 gacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcac 219  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  26661521 gacaatgttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgagtccagcaagtcgaaaatcttgtcacattttcccaaaatcgtgtcac 26661422  T
Q  220 gttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttcttaaatcaccaaattttg 319  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26661421 gttttgcctccaggaccaaccatgcattcaacatcagatatcgtgacacggatgtcaaatcgtgtcatgattcttcgctttcttaaatcaccaaattttg 26661322  T
Q  320 agtcatccataacaatgtacatcc 343  Q
    ||||||||||||||||||||||||    
T  26661321 agtcatccataacaatgtacatcc 26661298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 20 - 343
Target Start/End: Complemental strand, 26767592 - 26767269
Alignment:
Q  20 gtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  26767592 gtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcataatcatgtcacgttttcccaaatcgt 26767493  T
Q  120 gacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcac 219  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  26767492 gacaatgttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgagtccagcaagtcgaaaatcttgtcacattttcccaaaatcgtgtcac 26767393  T
Q  220 gttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttcttaaatcaccaaattttg 319  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26767392 gttttgcctccaggaccaaccatgcattcaacatcagatatcgtgacacggatgtcaaatcgtgtcatgattcttcgctttcttaaatcaccaaattttg 26767293  T
Q  320 agtcatccataacaatgtacatcc 343  Q
    ||||||||||||||||||||||||    
T  26767292 agtcatccataacaatgtacatcc 26767269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 21593344 - 21593138
Alignment:
Q  14 cctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttccca 113  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| || || ||| ||   |||||||| |||||| |||||||||||||| ||||||||    
T  21593344 cctttggtttccatgagattcaccaagcttacccaacaaatgggttatggagtgcttacatagtgttcatatccggacaaaatcgtgtcacattttccca 21593245  T
Q  114 aatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcg 213  Q
    ||||||||||  |||||| || || ||||||||||| |||||||||||||| |||||  | ||||||||||||||||| |||||| |||||||||||| |    
T  21593244 aatcgtgacacggttggtacgaacgacccaaggtacgaccaaccttatcctaaaaacatgcccagcaagccgaaaatcgtgtcacgttttcccaaaattg 21593145  T
Q  214 tgtcacg 220  Q
    |||||||    
T  21593144 tgtcacg 21593138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 3809186 - 3809402
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||| | |||||||| ||||| ||||||| |||   |||||||||||||| |||||||||     
T  3809186 ctaaaagttccctcctttggtttccatgagattcaccaagcttgctcaacaaatgggtcaaagaatgcttataatgtgttcagatccggacaaaatcgta 3809285  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||||| ||||||||||| |||||   ||||| ||||| ||||||||||| ||||||||||||||||||||   |||  ||||||||||||| |||||| |    
T  3809286 tcacgatttcccaaatcatgacacatttggtacgtacgacccaaggtacgaccaaccttatcctgaaaac-tttcc--caagccgaaaatcgtgtcacgt 3809382  T
Q  201 tttcccaaaatcgtgtcacg 220  Q
    || |||||||||||||||||    
T  3809383 ttccccaaaatcgtgtcacg 3809402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 22964080 - 22964209
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||||||||||||||||||||||| ||||||   |||| |||||| |  |||||||| ||||||||||||||||||||  |||||||||||| |||||    
T  22964080 caaaatcgtgtcacgttttcccaaattgtgacacgtttggcgcgtacgatacaaggtacgaccaaccttatcctgaaaacttgtccagcaagccaaaaat 22964179  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| ||||||||||||||| |||||    
T  22964180 cgtgtcacgttttcccaaaatcgtatcacg 22964209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 23824313 - 23824184
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||||||||||||||||||||||| ||||||   |||| |||||| |  |||||||| ||||||||||||||||||||  |||||||||||| |||||    
T  23824313 caaaatcgtgtcacgttttcccaaattgtgacacgtttggcgcgtacgatacaaggtacgaccaaccttatcctgaaaacttgtccagcaagccaaaaat 23824214  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| ||||||||||||||| |||||    
T  23824213 cgtgtcacgttttcccaaaatcgtatcacg 23824184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 91 - 212
Target Start/End: Complemental strand, 24435687 - 24435566
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||| |||||||||| ||  |||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||| | | | ||||  ||||||    
T  24435687 caaattcgtgtcacgattggccaaatcgtgacacggttggtgcgtacaacccaaggtacgaccaaccttatcctgaaaacgtgccaaacaagttgaaaat 24435588  T
Q  191 cttgtcacattttcccaaaatc 212  Q
    | |||||| |||||||||||||    
T  24435587 cgtgtcacgttttcccaaaatc 24435566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 26830601 - 26830721
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||| || ||| |||  | |||| |||||||| |||| |||||    
T  26830601 ctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaatggatcatggagtgcttatatattgtttagatccggacaaattcgtg 26830700  T
Q  101 tcacgttt-tcccaaatcgtg 120  Q
    |||||||| ||| ||||||||    
T  26830701 tcacgtttctccaaaatcgtg 26830721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 31979899 - 31980028
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||| || ||| |||| ||||||||||||||||||||| | ||||||||  ||||||    
T  31979899 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgactcaaagtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaat 31979998  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
      |||||| |||| ||||||||||| ||||    
T  31979999 tgtgtcacgtttttccaaaatcgtgacacg 31980028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 17762678 - 17762571
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    |||||||||  ||||||| ||||||||||||||||||||||||||||||||||| || ||| || ||| ||   ||||||||||||||| ||||||||||    
T  17762678 ctaaaagttctctccttttgtttccatgagattcaccaagcttacccaacaaatgggccatggagtgcttacatagtgttcagatccggacaaaatcgtg 17762579  T
Q  101 tcacgttt 108  Q
     |||||||    
T  17762578 acacgttt 17762571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 212
Target Start/End: Original strand, 18234465 - 18234587
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 189  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   |||||    
T  18234465 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaa 18234564  T
Q  190 tcttgtcacattttcccaaaatc 212  Q
    || | |||| |||||||||||||    
T  18234565 tcgtatcacgttttcccaaaatc 18234587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 603622 - 603715
Alignment:
Q  127 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||||||||| | ||||| ||| | ||||||||||||||||||  | ||||||||||||||||| |||||| |||||||||||||||||||||    
T  603622 ttggtgcgtacgatccaagatacgatcaaccttatcctgaaaacttgcccagcaagccgaaaatcatgtcacgttttcccaaaatcgtgtcacg 603715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 9183399 - 9183488
Alignment:
Q  131 tgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||||| ||||||||||| ||||||||||||||||||||  | |||||||| | |||||| |||||| |||||||||||||||||||||    
T  9183399 tgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagtcaaaaatcgtgtcacgttttcccaaaatcgtgtcacg 9183488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 95 - 232
Target Start/End: Original strand, 26954656 - 26954792
Alignment:
Q  95 atcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttg 194  Q
    ||||||||| |||| || |||||||||||  |||| ||||||| ||||||||||| ||||||||||||||||||| | ||| |||| ||| |||||| ||    
T  26954656 atcgtgtcatgtttcccaaaatcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatgtgtcaagcatgccaaaaatcgtg 26954755  T
Q  195 tcacattttcccaaaatcgtgtcacgttttgcctccag 232  Q
     ||| ||||  | ||||||||||| |||||||||||||    
T  26954756 acacgttttatc-aaatcgtgtcatgttttgcctccag 26954792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 91 - 214
Target Start/End: Complemental strand, 10076906 - 10076783
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||| |||||||||||||  |||||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||||    |||||||   |||||    
T  10076906 caaagtcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtaatcagcaagttaaaaat 10076807  T
Q  191 cttgtcacattttcccaaaatcgt 214  Q
    | | |||| |||||||||||||||    
T  10076806 cgtatcacgttttcccaaaatcgt 10076783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 31086189 - 31086110
Alignment:
Q  91 caaaatcgtgtcacgttttc-ccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 169  Q
    |||||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||    
T  31086189 caaaatcgtgtcacgtttttgccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 31086110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 5017211 - 5017133
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 169  Q
    |||||||||||||| ||||  ||||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||    
T  5017211 caaaatcgtgtcacattttttcaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 5017133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 5571943 - 5571850
Alignment:
Q  127 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||||||||| ||||||||||| |||||||||| ||| |||||| | ||||||||  ||||||| |||||| ||||| |||||||||| ||||    
T  5571943 ttggtgcgtacgacccaaggtacgaccaaccttaacctaaaaacgtgcccagcaagttgaaaatcgtgtcacgttttctcaaaatcgtgacacg 5571850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 17759494 - 17759427
Alignment:
Q  153 caaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||||||||||||||||  ||||||||||||||||||  |||||| ||| |||||||||||||||||    
T  17759494 caaccttatcctgaaaacttgtccagcaagccgaaaattgtgtcacgtttccccaaaatcgtgtcacg 17759427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 22425306 - 22425356
Alignment:
Q  4 aaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaat 54  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  22425306 aaagttccctcctttggtttccatgagattcaccaagcttatccaacaaat 22425356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 25072876 - 25072759
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    |||||||||  || ||||| ||||||||||||||| ||||||||| ||||||||  |||| || |||| ||| ||||||||| |||| ||||| ||| ||    
T  25072876 ctaaaagttcacttctttgatttccatgagattcatcaagcttactcaacaaatgagtcaaaggatgcttatacagtgttcaaatccaggcaatatcatg 25072777  T
Q  101 tcacg-ttttcccaaatc 117  Q
    ||||| |||||| |||||    
T  25072776 tcacgattttcctaaatc 25072759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 33211534 - 33211658
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||| |||||  ||||||||||||  |||||||||||| |||||| |||| |  |||| |||||| |||||| | ||| |||||| |||||    
T  33211534 caaaatcgtgtcatgttttgtcaaatcgtgacatggttggtgcgtacgacccaaagtacgataaaccatatcctaaaaacgtgcccaacaagcc-aaaat 33211632  T
Q  191 cttgtcacattttcccaaaatcgtgt 216  Q
    | || ||| |||| ||||||||||||    
T  33211633 catgacacgtttttccaaaatcgtgt 33211658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 16452679 - 16452756
Alignment:
Q  93 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 169  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| |||||||||||||||||||    
T  16452679 aaatcgtgtcacgtttttccccaatcgtgccatgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa 16452756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 16452790 - 16452867
Alignment:
Q  93 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 169  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| |||||||||||||||||||    
T  16452790 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa 16452867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 21272704 - 21272575
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||| |||||||| ||  ||||||| |||||  |||||||||||| | ||||||||  ||||||||||||||||||||| | | | || | | |||||    
T  21272704 caaaattgtgtcacgattggccaaatcttgacacggttggtgcgtacgatccaaggtatgaccaaccttatcctgaaaacgtgccaaacatgtcaaaaat 21272605  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | || |||  || |||||||||||||||||    
T  21272604 cgtgacacgattacccaaaatcgtgtcacg 21272575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 2973417 - 2973456
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaag 40  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  2973417 ctaaaagttccctcctttggtttccatgagattcaccaag 2973456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 5406548 - 5406655
Alignment:
Q  93 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| |||||||||||||| |||| |  | |||||||||| |||||    
T  5406548 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaat 5406647  T
Q  191 cttgtcac 198  Q
    | ||||||    
T  5406648 cgtgtcac 5406655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 5410873 - 5410980
Alignment:
Q  93 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| |||||||||||||| |||| |  | |||||||||| |||||    
T  5410873 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaat 5410972  T
Q  191 cttgtcac 198  Q
    | ||||||    
T  5410973 cgtgtcac 5410980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 30834884 - 30834994
Alignment:
Q  91 caaaatcgtgtcacgtttt--cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaa 187  Q
    |||||||||||||||||||  ||| ||||||| ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  | |||||||||| ||    
T  30834884 caaaatcgtgtcacgttttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaa 30834983  T
Q  188 aatcttgtcac 198  Q
    |||| ||||||    
T  30834984 aatcgtgtcac 30834994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 5043319 - 5043278
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagct 42  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  5043319 ctaaaagttccctcctttgatttccatgagattcaccaagct 5043278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 220
Target Start/End: Original strand, 5411583 - 5411712
Alignment:
Q  93 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 190  Q
    |||||||||||| |||| ||| ||||||| ||   ||| ||||||| ||||||||||| |||||||||||| |||||| |  | |||||||||| ||||     
T  5411583 aaatcgtgtcacatttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcttgaaaatcttgcccagcaagccaaaaaa 5411682  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
      ||||||  ||| ||||||||||||||||    
T  5411683 tgtgtcacgattttccaaaatcgtgtcacg 5411712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 198
Target Start/End: Original strand, 5413812 - 5413905
Alignment:
Q  106 ttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcac 198  Q
    ||||||| ||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||| |  | |||||||||| |||||| ||||||    
T  5413812 ttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcac 5413905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 168
Target Start/End: Original strand, 31405024 - 31405100
Alignment:
Q  93 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaa 168  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||| ||||||| ||||||||||||||||||    
T  31405024 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacctaaggtacgaccaaccttatcctgaaa 31405100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 108
Target Start/End: Original strand, 603553 - 603623
Alignment:
Q  38 aagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttt 108  Q
    |||||||| |||||||| ||||| ||||||| |||   |||||||||||||| ||||| |||| |||||||    
T  603553 aagcttactcaacaaatgggtcaaagaatgcttatattgtgttcagatccggacaaaagcgtgacacgttt 603623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 5407297 - 5407387
Alignment:
Q  131 tgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||||| ||||||||||| |||||||||||| |||||| |  | |||||||||| ||||   ||||||  ||| ||||||||||||||||    
T  5407297 tgcgtacgacccaaggtacgaccaaccttatcttgaaaatcttgcccagcaagccaaaaaatgtgtcacgattttccaaaatcgtgtcacg 5407387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 24714754 - 24714872
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||| |||||||| ||  ||| |||||||||  |||||  ||||  |||||  |||| ||||| ||||||||||||||| | ||||||||  ||||||    
T  24714754 caaaattgtgtcacgattggccatatcgtgacacggttggatcgtatgacccacagtacgaccaatcttatcctgaaaacgtgcccagcaagttgaaaat 24714853  T
Q  191 cttgtcacattttcccaaa 209  Q
    | |||||| |||| |||||    
T  24714854 cgtgtcacgtttttccaaa 24714872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 33160702 - 33160811
Alignment:
Q  91 caaaatcgtgtcacgttttccca-aatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 188  Q
    |||||| ||||||||||||||   ||||||| ||   ||| ||||||| |||||| |||| ||||||||||||||||||| |  | |||||||||| |||    
T  33160702 caaaattgtgtcacgttttccatcaatcgtgtcacgattgatgcgtacgacccaatgtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 33160801  T
Q  189 atcttgtcac 198  Q
    ||| ||||||    
T  33160802 atcgtgtcac 33160811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 21593102 - 21593058
Alignment:
Q  257 aaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttc 301  Q
    |||||||||||||| || |||||| |||||||||||||| |||||    
T  21593102 aaatcgtgacacggttgccaaatcatgtcacgattcttcactttc 21593058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 4e-72; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 50674323 - 50674536
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||   |||||||||||||| |||||| |||    
T  50674323 ctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcaaagaatgcatatattgtgttcagatccggacaaaattgtg 50674422  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||| | |||||||||||||||||   ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |    
T  50674423 tcatgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacgtgcccagcaagctgaaaatcatgtcacgt 50674522  T
Q  201 tttcccaaaatcgt 214  Q
    ||||||||||||||    
T  50674523 tttcccaaaatcgt 50674536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 6655647 - 6655428
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||   ||||||||| |||| ||||||||||    
T  6655647 ctaaaagttccctcctttggtttccatgagatttaccaagcttacccaacaaatgggtcaaagaatgcatatattgtgttcagaaccggacaaaatcgtg 6655548  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||||| |||||||||||||||||   ||||||||||| |||||| |||| ||||||||||||||||||||  | ||||||| ||||||||| ||||||||    
T  6655547 tcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacttgcccagcaaaccgaaaatcgtgtcacat 6655448  T
Q  201 tttcccaaaatcgtgtcacg 220  Q
    || |||||||||||||||||    
T  6655447 ttccccaaaatcgtgtcacg 6655428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 26363956 - 26363737
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||| || ||| ||   ||||||||||||||| ||||||||||    
T  26363956 ctaaaagttccctcccttggtttccatgagattcaccaagcttacccaacaaatgggtcatggagtgcttacatagtgttcagatccggacaaaatcgtg 26363857  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||||| |||||||||| ||||||   ||||||||||| ||||||||||  ||||||||||||||||||||  |  |||||||||||||||| |||||| |    
T  26363856 tcacgatttcccaaattgtgacacgtttggtgcgtacgacccaaggtatgaccaaccttatcctgaaaacttgctcagcaagccgaaaatcgtgtcacgt 26363757  T
Q  201 tttcccaaaatcgtgtcacg 220  Q
    ||||||||||||||||||||    
T  26363756 tttcccaaaatcgtgtcacg 26363737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 27417428 - 27417647
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||| || ||| |||  |||||| |||||||| ||||||||||    
T  27417428 ctaaaagttccctcctttggttttcatgagattcaccaagcttacccaacaaatgggtcatggagtgcttatatagtgtttagatccggacaaaatcgtg 27417527  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||||| |||||||||||||||||  |||| ||||||| ||||||||||| |||||||||||||||||| || | | | ||||  ||||||| |||||| |    
T  27417528 tcacgatttcccaaatcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaccgtgccgaacaagttgaaaatcgtgtcacgt 27417627  T
Q  201 tttcccaaaatcgtgtcacg 220  Q
    ||||||||||||||||||||    
T  27417628 tttcccaaaatcgtgtcacg 27417647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 40630675 - 40630456
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    ||||||||||||| ||||||||||    
T  40630675 ctaaaagtttcatcctttggtttccatgagattcaccaagcttacccaacaaatgggtcaaagaatgcatatattatgttcagatccggacaaaatcgtg 40630576  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||||| |||||||||||||||||   ||||||| ||  ||||||||||| ||||||||||| ||||||| | | | ||||||| ||||||| |||||| |    
T  40630575 tcacgatttcccaaatcgtgacacgtttggtgcatatgacccaaggtacgaccaaccttattctgaaaatgtgcctagcaagctgaaaatcgtgtcacgt 40630476  T
Q  201 tttcccaaaatcgtgtcacg 220  Q
    ||||||||||||||| ||||    
T  40630475 tttcccaaaatcgtgacacg 40630456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 34570763 - 34570892
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  34570763 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacttgtccagcaagccgaaaat 34570862  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| |||||||||||||||||||||    
T  34570863 cgtgtcacgttttcccaaaatcgtgtcacg 34570892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 54882711 - 54882512
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||  |||| |||||||||||| |||||||||||||||||||||| |||    
T  54882711 ctaaaagttccctcctttggtttccatgagattcactaagcttacccaacaaatgagtcaaagaatgcatatgtagtgttcagatccgggcaaaattgtg 54882612  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||||                     |||||||||||| ||||||||||| | ||||||||||||||||||| ||||| ||||||||||||| |||||| |    
T  54882611 tcac--------------------agttggtgcgtacgacccaaggtacgatcaaccttatcctgaaaacgtgtccaacaagccgaaaatcgtgtcacgt 54882532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 98 - 220
Target Start/End: Original strand, 9927817 - 9927939
Alignment:
Q  98 gtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtca 197  Q
    ||||||||||||||||||||||||||   ||||||||||| |||||||| || ||||||||||||||||||||  ||||||||||||||||||| |||||    
T  9927817 gtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggaacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtca 9927916  T
Q  198 cattttcccaaaatcgtgtcacg 220  Q
    |||||||||||||||||||||||    
T  9927917 cattttcccaaaatcgtgtcacg 9927939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 42 - 220
Target Start/End: Complemental strand, 41639215 - 41639037
Alignment:
Q  42 ttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacc 141  Q
    ||||||||||||| ||||||  | ||| ||   ||||||||||||| | ||||||||||||| | |||||||||||||||||  |||| ||||||| |||    
T  41639215 ttacccaacaaatgggtcatgaagtgcttacatagtgttcagatccagacaaaatcgtgtcatggtttcccaaatcgtgacacagttgatgcgtacgacc 41639116  T
Q  142 caaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    |||||||| ||||||||||||||||||||| | ||| ||||  ||||||| |||||| |||| ||||||||||||||||    
T  41639115 caaggtacgaccaaccttatcctgaaaacgtgcccaacaagttgaaaatcgtgtcacgtttttccaaaatcgtgtcacg 41639037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 37740445 - 37740320
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||||||||||||||||||||||||||||||   |||||| |||| ||||||||||| ||||||||||||||||||||  | || |||||||||||||    
T  37740445 caaaatcgtgtcacgttttcccaaatcgtgacacatttggtgtgtacgacccaaggtacgaccaaccttatcctgaaaacttgccctgcaagccgaaaat 37740346  T
Q  191 cttgtcacattttcccaaaatcgtgt 216  Q
    | |||||| |||||||||||||||||    
T  37740345 catgtcacgttttcccaaaatcgtgt 37740320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 50263175 - 50263383
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||   |||||||| ||||| ||| ||| |||   |||||||||||| | ||||||||||    
T  50263175 ctaaaagttccctcctttggttttcatgagattcaccaaactttttcaacaaatgggtcaaagagtgcttataatgtgttcagatccagacaaaatcgtg 50263274  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||||| ||||||||| |||||||   ||||||||||| | ||||||||| ||||||||||| ||||||||    ||| ||||||||||||| ||| || |    
T  50263275 tcacgatttcccaaaccgtgacacatttggtgcgtacga-ccaaggtacgaccaaccttattctgaaaacttacccaccaagccgaaaatcgtgttacgt 50263373  T
Q  201 tttcccaaaa 210  Q
    ||||||||||    
T  50263374 tttcccaaaa 50263383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 36314945 - 36314816
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||  ||||||    
T  36314945 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaat 36314846  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| |||||||||||||||| ||||    
T  36314845 cgtgtcacgttttcccaaaatcgtgacacg 36314816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 36329154 - 36329025
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||  ||||||    
T  36329154 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaat 36329055  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| |||||||||||||||| ||||    
T  36329054 cgtgtcacgttttcccaaaatcgtgacacg 36329025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 2209399 - 2209192
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||| ||||||| |||   |||||||||| | | ||||||  ||    
T  2209399 ctaaaagttccctcatttgctttccatgagattcaccaagcttacccaacaaatgggtcaaagaatgcttatattgtgttcagattcagacaaaattttg 2209300  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||||| ||||||||||||||||    |||||||            |||| ||||||||||||||||||||  | | ||||| ||||||||| |||||| |    
T  2209299 tcacgatttcccaaatcgtgacgcgtttggtgc------------gtacgaccaaccttatcctgaaaacttgcctagcaaaccgaaaatcgtgtcacgt 2209212  T
Q  201 tttcccaaaatcgtgtcacg 220  Q
    || |||||||||||||||||    
T  2209211 ttccccaaaatcgtgtcacg 2209192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 5429499 - 5429370
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||| ||||||||| |||||||||   ||||||||||| ||||||||||| ||||| |||| |||||||||  ||||| ||||| ||||||    
T  5429499 caaaatcgtgtcatgttttcccacatcgtgacacgattggtgcgtacgacccaaggtacgaccaatcttaacctgaaaacttgtccaacaagctgaaaat 5429400  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | | |||| |||||||||||||||||||||    
T  5429399 cgtatcacgttttcccaaaatcgtgtcacg 5429370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 54200255 - 54200362
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||||||||||| ||||||||||||||||| |  ||||||||||| ||||||||||| |||||||||||| |||||||  | ||||||||||||||||    
T  54200255 caaaatcgtgtcacattttcccaaatcgtgactagtttggtgcgtacgacccaaggtacgaccaaccttatcttgaaaacttgcccagcaagccgaaaat 54200354  T
Q  191 cttgtcac 198  Q
    | ||||||    
T  54200355 cgtgtcac 54200362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 8689211 - 8689082
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 189  Q
    ||||||||||||||||||||| |||||||| ||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   |||||    
T  8689211 caaaatcgtgtcacgttttcc-aaatcgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaa 8689113  T
Q  190 tcttgtcacattttcccaaaatcgtgtcacg 220  Q
    || |||||| |||||||||||||||||||||    
T  8689112 tcgtgtcacgttttcccaaaatcgtgtcacg 8689082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 25861748 - 25861618
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||||  |||||||||||||   ||| ||||||| ||||||||||| ||||||||||||||||||||  | ||||||||  ||||||    
T  25861748 caaaatcgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacatgcccagcaagttgaaaat 25861649  T
Q  191 cttgtcac-attttcccaaaatcgtgtcacg 220  Q
    | ||||||  |||||||||||||||| ||||    
T  25861648 cgtgtcacgtttttcccaaaatcgtgacacg 25861618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 5268914 - 5268785
Alignment:
Q  92 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaat 190  Q
    |||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||| ||||   ||||||    
T  5268914 aaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaat 5268815  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| |||||||||||||||| ||||    
T  5268814 cgtgtcacgttttcccaaaatcgtgacacg 5268785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 54867561 - 54867690
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||| | ||||||||| |||||||||||||  |||||| | ||||||||  ||||||    
T  54867561 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgatccaaggtacgaccaaccttatccgaaaaacgtgcccagcaagttgaaaat 54867660  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| |||||||||||| ||| ||||    
T  54867661 cgtgtcacgttttcccaaaattgtgacacg 54867690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 5143644 - 5143772
Alignment:
Q  92 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaat 190  Q
    |||||||||||||||||||| |||||||||||   |||||||| |||||||||||| | |||||||||||||||||||||   ||| ||||   ||||||    
T  5143644 aaaatcgtgtcacgttttcc-aaatcgtgacacgattggtgcgcacaacccaaggtgcgaccaaccttatcctgaaaacgtacccaacaagtttgaaaat 5143742  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||||||||| |||||||||| ||||    
T  5143743 cgtgtcacattttcacaaaatcgtgccacg 5143772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 6743130 - 6743001
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||| |||||| |||||||||||||||||||   || ||||||||  |||||||||| ||||||||||||||||||||| | ||| ||||   |||||    
T  6743130 caaaattgtgtcaagttttcccaaatcgtgacacgattagtgcgtacgtcccaaggtacgaccaaccttatcctgaaaacgtgcccaacaagtttaaaat 6743031  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| ||||||||||| |||| ||||    
T  6743030 cgtgtcacgttttcccaaaaacgtgccacg 6743001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 220
Target Start/End: Original strand, 12745787 - 12745895
Alignment:
Q  113 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaat 211  Q
    |||||||||||   |||| |||||| ||||||||||| ||||||||||||||| |||||  | ||||||||||||||||| |||||| ||||||||||||    
T  12745787 aaatcgtgacacgattggcgcgtacgacccaaggtacgaccaaccttatcctggaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaat 12745886  T
Q  212 cgtgtcacg 220  Q
    | |||||||    
T  12745887 catgtcacg 12745895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 55085843 - 55085946
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||||||||||| ||||| ||||||| | |  || |||||||| ||||||||||||||    
T  55085843 ctaaaagttccctcctttggtttcattgagattcaccaagcttacccaacaaatgggtcaaagaatgc-tttatagagttcagattcgggcaaaatcgtg 55085941  T
Q  101 tcacg 105  Q
     ||||    
T  55085942 acacg 55085946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 46570023 - 46570130
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    |||||| || ||||||||||||||||||||||||||||||||| |||||||||| |||||| |  ||| ||   ||||||||||||| | ||||||||||    
T  46570023 ctaaaatttccctcctttggtttccatgagattcaccaagcttgcccaacaaatgggtcatggtgtgcttacatagtgttcagatccagacaaaatcgtg 46570122  T
Q  101 tcacgttt 108  Q
     |||||||    
T  46570123 acacgttt 46570130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 16623008 - 16622931
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 169  Q
    ||||||||||||||||||||| |||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||    
T  16623008 caaaatcgtgtcacgttttcc-aaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 16622931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 35661985 - 35661911
Alignment:
Q  146 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    |||| ||||||||||||||||||||| | ||| ||||||||||||| || |||||||||||||||||||||||||    
T  35661985 gtacgaccaaccttatcctgaaaacgtgcccaacaagccgaaaatcgtgacacattttcccaaaatcgtgtcacg 35661911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 8653200 - 8653111
Alignment:
Q  206 caaaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtcacgattcttc 295  Q
    ||||||||||||||||||| ||| |||  |||| ||||||||| ||||||||||| ||||||||| || |||||| ||||||||||||||    
T  8653200 caaaatcgtgtcacgttttaccttcagatccaaacatgcattcgacatcagaaattgtgacacggttgccaaatcatgtcacgattcttc 8653111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 8665007 - 8664918
Alignment:
Q  206 caaaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtcacgattcttc 295  Q
    ||||||||||||||||||| ||| |||  |||| ||||||||| ||||||||||| ||||||||| || |||||| ||||||||||||||    
T  8665007 caaaatcgtgtcacgttttaccttcagatccaaacatgcattcgacatcagaaattgtgacacggttgccaaatcatgtcacgattcttc 8664918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 10071477 - 10071403
Alignment:
Q  193 tgtcacattttcccaaaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacac 268  Q
    ||||||||||||| |||||||||| |||||||| |||||| ||||| |||||||||| ||||||||||||||||||    
T  10071477 tgtcacattttcc-aaaatcgtgttacgttttgtctccagaaccaaacatgcattcagcatcagaaatcgtgacac 10071403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 220
Target Start/End: Original strand, 46570115 - 46570222
Alignment:
Q  113 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatc 212  Q
    |||||||||||   ||| ||||||| |||||| |||| |||||||||||||||||||   | ||||||||||||||||  |||||| |||||||||||||    
T  46570115 aaatcgtgacacgtttgatgcgtacgacccaaagtacgaccaaccttatcctgaaaatttgcccagcaagccgaaaattgtgtcacgttttcccaaaatc 46570214  T
Q  213 gtgtcacg 220  Q
     |||||||    
T  46570215 ttgtcacg 46570222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 5148064 - 5148189
Alignment:
Q  95 atcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaatctt 193  Q
    ||||||||||||||| | |||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||||  ||||| |||   ||||||| |    
T  5148064 atcgtgtcacgttttgc-aaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtatccagtaagtttgaaaatcgt 5148162  T
Q  194 gtcacattttcccaaaatcgtgtcacg 220  Q
    ||||  ||||| |||||||||| ||||    
T  5148163 gtcaagttttcacaaaatcgtgccacg 5148189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 16628587 - 16628510
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 169  Q
    ||||||||||||||||||||| |||||||||||   ||||||||||| ||||||||||| |||||||||||| ||||||    
T  16628587 caaaatcgtgtcacgttttcc-aaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcatgaaaa 16628510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 139 - 220
Target Start/End: Original strand, 52095757 - 52095839
Alignment:
Q  139 acccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||||||||| ||||||||||||||||||| |  | |||||||||| |||||| |||||| |||||||||||||||||||||    
T  52095757 acccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacg 52095839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 29254313 - 29254206
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||||| |||||||||||||   ||||||||||| | ||||  ||| ||||||||||| ||||| ||  | ||| ||||||||||||    
T  29254313 caaaatcgtgtcacgtttttccaaatcgtgacacgtttggtgcgtacgatccaaaatacgaccaaccttattctgaatacttgcccaacaagccgaaaat 29254214  T
Q  191 cttgtcac 198  Q
    | ||||||    
T  29254213 catgtcac 29254206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 36994365 - 36994250
Alignment:
Q  105 gttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttc 204  Q
    ||||| |||||||||||||  |||||||||||| ||| ||||||| | ||||||||||  ||||||| | | ||||||||||||||  || ||| |||||    
T  36994365 gttttgccaaatcgtgacacggttggtgcgtacgacctaaggtacgatcaaccttatctagaaaacgtgcctagcaagccgaaaattgtgacacgttttc 36994266  T
Q  205 ccaaaatcgtgtcacg 220  Q
    | ||||| ||||||||    
T  36994265 caaaaattgtgtcacg 36994250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 26176028 - 26176102
Alignment:
Q  146 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    |||| ||||||||||||||||||||  | ||| ||||||||||||| |||||| |||||||||||| ||||||||    
T  26176028 gtacgaccaaccttatcctgaaaacttgcccatcaagccgaaaatcgtgtcacgttttcccaaaattgtgtcacg 26176102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8653291 - 8653239
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaa 53  Q
    |||||||||  ||||||||||||||||||||||||||||||||||| ||||||    
T  8653291 ctaaaagttctctcctttggtttccatgagattcaccaagcttacctaacaaa 8653239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8665098 - 8665046
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaa 53  Q
    |||||||||  ||||||||||||||||||||||||||||||||||| ||||||    
T  8665098 ctaaaagttctctcctttggtttccatgagattcaccaagcttacctaacaaa 8665046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 10071575 - 10071524
Alignment:
Q  2 taaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaa 53  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  10071575 taaaagttccctcctttgatttccatgagattcaccaagattacccaacaaa 10071524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 56179028 - 56179103
Alignment:
Q  146 gtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    |||| ||||||||||||||||||| |  | |||||||||| |||||| |||||| |||||||||||||||||||||    
T  56179028 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcatgtcacgttttcccaaaatcgtgtcacg 56179103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 225
Target Start/End: Complemental strand, 3909915 - 3909782
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||| ||||||||||||  |||||||||||  |||| ||||||| || |||||||| ||||||||||| || |||||| | | | || ||| |||||    
T  3909915 caaaatcatgtcacgttttctaaaatcgtgacacggttgatgcgtacgactcaaggtacgaccaaccttat-cttaaaacgtgccaaacatgccaaaaat 3909817  T
Q  191 cttgtcacattttcccaaaatcgtgtcacgttttg 225  Q
      |||||  |||||| |||||||||||||| ||||    
T  3909816 agtgtcatgttttccaaaaatcgtgtcacgatttg 3909782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22883230 - 22883283
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaat 54  Q
    |||||| || |||| |||||||||||||||||||||||||||||| ||||||||    
T  22883230 ctaaaatttccctcatttggtttccatgagattcaccaagcttactcaacaaat 22883283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22934894 - 22934947
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaat 54  Q
    |||||| || |||| |||||||||||||||||||||||||||||| ||||||||    
T  22934894 ctaaaatttccctcatttggtttccatgagattcaccaagcttactcaacaaat 22934947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33989553 - 33989501
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaa 53  Q
    |||||||||  || ||||||||||||||||||||||||||||| |||||||||    
T  33989553 ctaaaagttatctgctttggtttccatgagattcaccaagcttgcccaacaaa 33989501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 41964107 - 41964044
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcataga 64  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||| | || ||||| |||||||||    
T  41964107 ctaaaagttccctcctttgatttccatgagattcaccaaactttctcaccaaatgggtcataga 41964044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 3777966 - 3778060
Alignment:
Q  127 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagc-aagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||||||||| ||||||||||| |||||||||||| ||||||||   | ||| ||   ||||||| |||||| |||||||||||||||| ||||    
T  3777966 ttggtgcgtacgacccaaggtacgaccaaccttatcttgaaaacgtaccgagcaaatttgaaaatcgtgtcacgttttcccaaaatcgtgacacg 3778060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12073084 - 12073042
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagctt 43  Q
    ||||||||| | |||||||||||||||||||||||||||||||    
T  12073084 ctaaaagttccatcctttggtttccatgagattcaccaagctt 12073042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 52083007 - 52083084
Alignment:
Q  93 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 169  Q
    ||||||||||||||||| ||||||||||| ||   ||| ||| ||| ||||||||||  |||||||||||||||||||    
T  52083007 aaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgcttacgacccaaggtatgaccaaccttatcctgaaaa 52083084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 52094014 - 52094091
Alignment:
Q  93 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 169  Q
    ||||||||||||||||| ||||||||||| ||   ||| ||| ||| ||||||||||  |||||||||||||||||||    
T  52094014 aaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgcttacgacccaaggtatgaccaaccttatcctgaaaa 52094091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 46703192 - 46703152
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagc 41  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  46703192 ctaaaagttctctcctttggtttccatgagattcaccaagc 46703152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3785781 - 3785722
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtca 60  Q
    ||||||||| | ||||||| |||||||||||| |||||| ||||| |||||||| |||||    
T  3785781 ctaaaagttccatcctttgatttccatgagatccaccaaacttactcaacaaatgggtca 3785722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 5370479 - 5370554
Alignment:
Q  146 gtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    |||| ||||||||||||||||||  |  | |||||||||| |||||| ||||||  ||||||||||||||||||||    
T  5370479 gtacgaccaaccttatcctgaaagtcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacg 5370554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 5396370 - 5396327
Alignment:
Q  127 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 170  Q
    ||||||||||| ||||||||||| | ||||||||||||||||||    
T  5396370 ttggtgcgtacgacccaaggtacgatcaaccttatcctgaaaac 5396327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 24968888 - 24968801
Alignment:
Q  132 gcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcac 219  Q
    |||||| |||||| |||| ||||||||||||||||||||| ||| |||| ||  || ||| ||||||  || | ||||||||||||||    
T  24968888 gcgtacgacccaatgtacgaccaaccttatcctgaaaacgtgtcaagcatgctaaatatcgtgtcacgattgcacaaaatcgtgtcac 24968801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 35370816 - 35370859
Alignment:
Q  2 taaaagtttcctcctttggtttccatgagattcaccaagcttac 45  Q
    |||||||| ||||||||| ||||||||||||||| |||||||||    
T  35370816 taaaagttccctcctttgatttccatgagattcatcaagcttac 35370859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 35369913 - 35369971
Alignment:
Q  2 taaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtca 60  Q
    |||||||| ||||||||  ||||||||||||||| ||||||||| ||||| || |||||    
T  35369913 taaaagttccctcctttaatttccatgagattcatcaagcttactcaacagatgggtca 35369971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 379069 - 379028
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagct 42  Q
    |||||||||  ||||||||||||||| |||||||||||||||    
T  379069 ctaaaagttctctcctttggtttccacgagattcaccaagct 379028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 26363701 - 26363656
Alignment:
Q  257 aaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 302  Q
    ||||||||||| || || ||||||||||||||||||||| ||||||    
T  26363701 aaatcgtgacatggttgccaaatcgtgtcacgattcttcactttct 26363656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 26699929 - 26699978
Alignment:
Q  5 aagtttcctcctttggtttccatgagattcaccaagcttacccaacaaat 54  Q
    ||||| |||| ||||||||||||||||||||| |||||| | ||||||||    
T  26699929 aagttccctcatttggtttccatgagattcacaaagcttgctcaacaaat 26699978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 12739942 - 12740014
Alignment:
Q  146 gtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtc 217  Q
    |||| ||||||||||||||||||| |  | |||||||||| |||||  ||| || ||||||||||||||||||    
T  12739942 gtacgaccaaccttatcctgaaaaacttgcccagcaagccaaaaattgtgttacgttttcccaaaatcgtgtc 12740014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 12748148 - 12748220
Alignment:
Q  146 gtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtc 217  Q
    |||| ||||||||||||||||||| |  | |||||||||| |||||  ||| || ||||||||||||||||||    
T  12748148 gtacgaccaaccttatcctgaaaaacttgcccagcaagccaaaaattgtgttacgttttcccaaaatcgtgtc 12748220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 25723708 - 25723752
Alignment:
Q  16 tttggtttccatgagattcaccaagcttacccaacaaattggtca 60  Q
    |||||||||||||| |||||||||||||||  ||||||| |||||    
T  25723708 tttggtttccatgaaattcaccaagcttacttaacaaataggtca 25723752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 11249 - 11030
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||   ||||||||| |||| ||||||||||    
T  11249 ctaaaagttccctcctttggtttccatgagatttaccaagcttacccaacaaatgggtcaaagaatgcatatattgtgttcagaaccggacaaaatcgtg 11150  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||||| |||||||||||||||||   ||||||||||| |||||| |||| ||||||||||||||||||||  | ||||||| ||||||||| ||||||||    
T  11149 tcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacttgcccagcaaaccgaaaatcgtgtcacat 11050  T
Q  201 tttcccaaaatcgtgtcacg 220  Q
    || |||||||||||||||||    
T  11049 ttccccaaaatcgtgtcacg 11030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 4e-66; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 42435468 - 42435687
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||   ||||||||| |||| ||||||| ||    
T  42435468 ctaaaagtttcctcctttggtttccatgagattcaccaagcttaccgaacaaatgggtcaaagaatgcatatattgtgttcagaaccggacaaaatcatg 42435567  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||||| |||||||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | | |||||| |||||||| |||||| |    
T  42435568 tcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgccaagcaagacgaaaatcgtgtcacgt 42435667  T
Q  201 tttcccaaaatcgtgtcacg 220  Q
    || |||||||||||||||||    
T  42435668 ttccccaaaatcgtgtcacg 42435687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 4283237 - 4283040
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    |||||||||  |||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||| | |   |||||||||||||  |||||| |||    
T  4283237 ctaaaagttctctcctttggtttccatgagattcaccaagcttacacaacaaatgggtcaaagaatgcttgtattgtgttcagatccgaacaaaatggtg 4283138  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcac 198  Q
    ||||| ||||||||||| | |||   ||||||| ||| ||||||||||| ||||||||||||||||||||  | ||||||||||||||||| ||||||    
T  4283137 tcacgatttcccaaatcctaacacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcac 4283040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 30143161 - 30143032
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||| |||||| |||| |||||||||||||| |||||  ||||||||||||||||||    
T  30143161 caaaatcgtgtcacgttttgccaaatcgtgacacggttggtgcgtacgacccaaagtacgaccaaccttatccttaaaacttgtccagcaagccgaaaat 30143062  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | ||||||||||||||||||||||||||||    
T  30143061 cgtgtcacattttcccaaaatcgtgtcacg 30143032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 22976225 - 22976006
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    |||||||||  ||||||||||||| | ||||||||| ||||||||||||||||| ||| || || ||| ||   ||||||||||||| | |||| |||||    
T  22976225 ctaaaagttcactcctttggtttcgaagagattcactaagcttacccaacaaatgggttatggagtgcttacatagtgttcagatccagacaaagtcgtg 22976126  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    | ||| |||||| ||||||||||   ||||||||| | |||||| |||| || |||||||||||||||||  ||| ||||||| ||||||| |||||| |    
T  22976125 ttacgatttcccgaatcgtgacacgtttggtgcgtgcgacccaatgtacgacaaaccttatcctgaaaacttgtcaagcaagctgaaaatcgtgtcacgt 22976026  T
Q  201 tttcccaaaatcgtgtcacg 220  Q
    ||||||||||||||||||||    
T  22976025 tttcccaaaatcgtgtcacg 22976006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 4731477 - 4731348
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||||| |||||||||||||  |||||||| |||  |||||||||| ||||| ||||| ||||||||| ||||||||||||||||||    
T  4731477 caaaatcgtgtcacgttttgccaaatcgtgacacagttggtgcctacggcccaaggtacgaccaatcttattctgaaaacgtgtccagcaagccgaaaat 4731378  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||  |||||||||||||||||||||    
T  4731377 catgtcatgttttcccaaaatcgtgtcacg 4731348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 94 - 220
Target Start/End: Complemental strand, 15212602 - 15212476
Alignment:
Q  94 aatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatctt 193  Q
    ||||||||||| |||||| |||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  |  |||||||||||||||| |    
T  15212602 aatcgtgtcacattttcctaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgctcagcaagccgaaaatcgt 15212503  T
Q  194 gtcacattttcccaaaatcgtgtcacg 220  Q
    ||||| |||||||||||||||||||||    
T  15212502 gtcacgttttcccaaaatcgtgtcacg 15212476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 43036242 - 43036113
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| | ||||||||| | ||||||||||||||||||  | ||| |||| |||||||    
T  43036242 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgatccaaggtacgatcaaccttatcctgaaaacttgcccaacaagtcgaaaat 43036143  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| |||| ||||||||||||||||    
T  43036142 cgtgtcacgtttttccaaaatcgtgtcacg 43036113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 113 - 220
Target Start/End: Complemental strand, 27811095 - 27810988
Alignment:
Q  113 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatc 212  Q
    |||||||||||   ||||||||||||||||||| ||| ||||||||||||||||||||  | ||||||||||||||||| |||||||||||| |||||||    
T  27811095 aaatcgtgacacgtttggtgcgtacaacccaagatacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacattttctcaaaatc 27810996  T
Q  213 gtgtcacg 220  Q
    ||||||||    
T  27810995 gtgtcacg 27810988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 40221425 - 40221236
Alignment:
Q  11 cctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttc 110  Q
    |||||| |||||||||||||||||||||||||||| |||||||| ||||| ||||||| |||   |||||||||||||  |||||||||| |||||||      
T  40221425 cctcctatggtttccatgagattcaccaagcttactcaacaaatgggtcaaagaatgcttatattgtgttcagatccgaacaaaatcgtgacacgttt-- 40221328  T
Q  111 ccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaa 210  Q
                      ||||||||| |||||||| || || |||||||||||||||||| ||||| ||||| ||||||| |||||| |||||||||||    
T  40221327 ------------------ggtgcgtacgacccaaggcacgacaaaccttatcctgaaaacgtgtccaacaagctgaaaatcgtgtcacgttttcccaaaa 40221246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 12702987 - 12703117
Alignment:
Q  91 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaa 189  Q
    ||||||||||||||||||| ||||||||||||||    |||||||||| |||||| |||| |||||||||||||||||| |  |   ||||||| |||||    
T  12702987 caaaatcgtgtcacgtttttcccaaatcgtgacacgtatggtgcgtacgacccaatgtacgaccaaccttatcctgaaagcttgcttagcaagctgaaaa 12703086  T
Q  190 tcttgtcacattttcccaaaatcgtgtcacg 220  Q
    || |||||| |||||||||||||||||||||    
T  12703087 tcgtgtcacgttttcccaaaatcgtgtcacg 12703117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 113 - 220
Target Start/End: Complemental strand, 4733622 - 4733515
Alignment:
Q  113 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatc 212  Q
    |||||||||||  |||||||||||| ||||||||||| || |||  ||||||||||||| ||  || |||||||||||| |||||| |||||||||||||    
T  4733622 aaatcgtgacacggttggtgcgtacgacccaaggtacgacaaactgtatcctgaaaacgtgtttagaaagccgaaaatcgtgtcacgttttcccaaaatc 4733523  T
Q  213 gtgtcacg 220  Q
    ||||||||    
T  4733522 gtgtcacg 4733515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 5702195 - 5702065
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 189  Q
    |||||||||| |||||||| |||||||||||||   ||||||||||||| ||||||||| ||||||||||||||||||| |   ||||||||   |||||    
T  5702195 caaaatcgtgacacgttttgccaaatcgtgacacgattggtgcgtacaatccaaggtacgaccaaccttatcctgaaaatgtacccagcaagtttgaaaa 5702096  T
Q  190 tcttgtcacattttcccaaaatcgtgtcacg 220  Q
    || |||||| |||| ||||||||||| ||||    
T  5702095 tcgtgtcacgtttttccaaaatcgtgacacg 5702065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 1345718 - 1345848
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt--acaaccaaccttatcctgaaaacgggtccagcaagccgaaa 188  Q
    |||||||||||||||||| |  ||| |||||||  |||| ||||||| |||||||||  || ||||||||||||||||||||| ||| ||||||| ||||    
T  1345718 caaaatcgtgtcacgtttcctaaaaccgtgacatggttgatgcgtacgacccaaggtgtacgaccaaccttatcctgaaaacgtgtcaagcaagctgaaa 1345817  T
Q  189 atcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||  |||||||||||| | |||||||||||||    
T  1345818 attgtgtcacattttctc-aaatcgtgtcacg 1345848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 1746566 - 1746697
Alignment:
Q  91 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 188  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  | |||||||||| |||    
T  1746566 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 1746665  T
Q  189 atcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||| ||||||  ||||||||||||||||||||    
T  1746666 atcgtgtcacgatttcccaaaatcgtgtcacg 1746697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 11383585 - 11383479
Alignment:
Q  113 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatc 212  Q
    |||||||||||  |||| ||||||| |||||| |||| |||||||||||| ||||||   | ||||||||| ||||||| |||||| |||||||||||||    
T  11383585 aaatcgtgacacggttgatgcgtacgacccaaagtacgaccaaccttatcttgaaaatttgcccagcaagctgaaaatcgtgtcacgttttcccaaaatc 11383486  T
Q  213 gtgtcac 219  Q
    |||||||    
T  11383485 gtgtcac 11383479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 220
Target Start/End: Original strand, 34256854 - 34256983
Alignment:
Q  93 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||||||||| ||||||||||||| |  |  ||||||||| |||||    
T  34256854 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacaaccaatcttatcctgaaaatcttgctcagcaagccaaaaat 34256953  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | ||||||  ||||||||||||||||||||    
T  34256954 cgtgtcacgatttcccaaaatcgtgtcacg 34256983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44353486 - 44353433
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaat 54  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44353486 ctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaat 44353433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 97 - 220
Target Start/End: Original strand, 4743548 - 4743672
Alignment:
Q  97 cgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaagccgaaaatcttgt 195  Q
    ||||| ||||||| |||||| ||||||  |||| ||||||| ||||| ||||| ||||||||||||||| |||||| | | |||||| |||||||| |||    
T  4743548 cgtgtgacgttttgccaaattgtgacacggttgatgcgtacgacccacggtacgaccaaccttatcctgaaaaacgtgccaagcaagtcgaaaatcgtgt 4743647  T
Q  196 cacattttcccaaaatcgtgtcacg 220  Q
    ||| ||| | |||||||||||||||    
T  4743648 cacgtttcctcaaaatcgtgtcacg 4743672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 93 - 220
Target Start/End: Complemental strand, 19175445 - 19175318
Alignment:
Q  93 aaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaatc 191  Q
    ||||||| ||||||||||| |||||||| ||   ||||||| ||| |||||||||| ||||||||||||||||||||||   ||||||||   |||||||    
T  19175445 aaatcgtatcacgttttcc-aaatcgtggcacgattggtgcatacgacccaaggtataaccaaccttatcctgaaaacgtacccagcaagtttgaaaatc 19175347  T
Q  192 ttgtcacattttcccaaaatcgtgtcacg 220  Q
     |||||| |||||||||||||||| ||||    
T  19175346 atgtcacgttttcccaaaatcgtgacacg 19175318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 91 - 167
Target Start/End: Complemental strand, 33351969 - 33351893
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaa 167  Q
    ||||||||||||||||||||||||||| |||||   ||||||||||  ||||||||||| |||||||||||||||||    
T  33351969 caaaatcgtgtcacgttttcccaaatcatgacacgtttggtgcgtatgacccaaggtacgaccaaccttatcctgaa 33351893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 93 - 218
Target Start/End: Original strand, 34254678 - 34254805
Alignment:
Q  93 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||| |  | ||||||| || |||||    
T  34254678 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaatccaaaaat 34254777  T
Q  191 cttgtcacattttcccaaaatcgtgtca 218  Q
    | ||||||  ||||||||||||||||||    
T  34254778 cgtgtcacgatttcccaaaatcgtgtca 34254805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11383677 - 11383624
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaat 54  Q
    ||||||||| ||||||||||||||||||||||||||||||||| || |||||||    
T  11383677 ctaaaagttccctcctttggtttccatgagattcaccaagcttgcctaacaaat 11383624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 23799291 - 23799211
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 171  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||| |||||| |||| ||||||||||| || ||||||    
T  23799291 caaaatcgtgtcacgtttgtccaaatcgtgacacaattggtgcgtacgacccaacgtacgaccaaccttattctaaaaacg 23799211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 4731313 - 4731267
Alignment:
Q  256 gaaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 302  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  4731313 gaaatcgtgacacggttgtcaaatcgtgtcacgattcttcactttct 4731267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 220
Target Start/End: Complemental strand, 42497986 - 42497904
Alignment:
Q  139 acccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||||||||| || |||||||||||||||| |  | |||||||||| | |||| ||||||| ||||||||||||||||||||    
T  42497986 acccaaggtacgactaaccttatcctgaaaatcttgcccagcaagccaataatcgtgtcacaatttcccaaaatcgtgtcacg 42497904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 20686537 - 20686586
Alignment:
Q  4 aaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaa 53  Q
    |||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  20686537 aaagttccctcctttggtttcaatgagattcaccgagcttacccaacaaa 20686586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 4696307 - 4696263
Alignment:
Q  127 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 171  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||    
T  4696307 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacg 4696263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 10014957 - 10014849
Alignment:
Q  112 caaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaat 211  Q
    ||||||||||||   ||| ||| ||| ||||||||||| ||||||||||||||| ||||| | | |||| ||| |||||| |||||   || ||||||||    
T  10014957 caaatcgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 10014858  T
Q  212 cgtgtcacg 220  Q
    |||||||||    
T  10014857 cgtgtcacg 10014849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 219
Target Start/End: Complemental strand, 31218077 - 31217947
Alignment:
Q  91 caaaatcgtgtcacgttttc-ccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 188  Q
    |||||||||||||||||||  || ||||||| ||   ||| ||||||  | ||||||||| |||||||||||||| |||| |  | ||| |||||| |||    
T  31218077 caaaatcgtgtcacgttttttcccaatcgtgtcacgattgatgcgtatgatccaaggtacgaccaaccttatcctaaaaatcttgcccaacaagccaaaa 31217978  T
Q  189 atcttgtcacattttcccaaaatcgtgtcac 219  Q
    ||| ||||||  |||||||||||||||||||    
T  31217977 atcgtgtcacgatttcccaaaatcgtgtcac 31217947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 17982473 - 17982364
Alignment:
Q  91 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 188  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||| | ||||||||| |||||||||||||| |||| |  | |||||||||| |||    
T  17982473 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaa 17982374  T
Q  189 atcttgtcac 198  Q
    ||| ||||||    
T  17982373 atcgtgtcac 17982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 19948669 - 19948778
Alignment:
Q  91 caaaatcgtgtcacg-ttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 188  Q
    ||||||||||||||| ||||||| ||||||| ||   ||| ||||||| | ||||||||| ||||| |||||| | |||| |  |||||||||||| |||    
T  19948669 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaacttatcataaaaatcttgtccagcaagccaaaa 19948768  T
Q  189 atcttgtcac 198  Q
    ||| ||||||    
T  19948769 atcgtgtcac 19948778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 80760 - 80979
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| |||||||||||||||||||||||||||||| ||  ||||||||| ||| | ||||||| |||   |||||||||||||| ||||||||||    
T  80760 ctaaaagttccctcctttggtttccatgagattcaccaagattttccaacaaatgggtgaaagaatgcttatattgtgttcagatccggacaaaatcgtg 80859  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||||| |||||||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||||||||||||| || ||| |    
T  80860 tcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgccacgt 80959  T
Q  201 tttcccaaaatcgtgtcacg 220  Q
    ||||||||||||||||||||    
T  80960 tttcccaaaatcgtgtcacg 80979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 1e-63; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 4569642 - 4569423
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||| |||    |||||| ||||| |||||||||||    
T  4569642 ctaaaagttccctcctttggtttccatgagattcaccaagcttactcaacaaatgggtcaaagaatgcttatattttgttcaaatccgagcaaaatcgtg 4569543  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    |||||||||||  || |||||||  |||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||||||||||||| |||||| |    
T  4569542 tcacgttttccacaaccgtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgt 4569443  T
Q  201 tttcccaaaatcgtgtcacg 220  Q
    |||||||||||| |||||||    
T  4569442 tttcccaaaatcatgtcacg 4569423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 43404210 - 43404429
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| ||||| ||||| |||||   ||||||||||||||  |||||||||    
T  43404210 ctaaaagttccctcatttggtttccatgagattcaccaagctcacccaacaaatgggtcaaagaatacatatattgtgttcagatccggagaaaatcgtg 43404309  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||||| |||||||||||||||||   ||||||||||| ||||||||||| ||| ||||||||||||||||  |  |||||||||||||||| |||||| |    
T  43404310 tcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccgaccttatcctgaaaacttgctcagcaagccgaaaatcgtgtcacgt 43404409  T
Q  201 tttcccaaaatcgtgtcacg 220  Q
    || |||||||||||||||||    
T  43404410 ttccccaaaatcgtgtcacg 43404429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 55302442 - 55302660
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||| || ||| ||   ||||||||||||||| |||||| |||    
T  55302442 ctaaaagtttcctcctttggtttcaatgaaattcaccaagcttacccaacaaatgggtcatggagtgcttacatagtgttcagatccggacaaaattgtg 55302541  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||||| |||||||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||||||||||||| | |||| |    
T  55302542 tcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtatcacgt 55302641  T
Q  201 tttcccaaaatcgtgtcacg 220  Q
    |||||| |||||||||||||    
T  55302642 tttccc-aaatcgtgtcacg 55302660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 12 - 220
Target Start/End: Complemental strand, 36018530 - 36018334
Alignment:
Q  12 ctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcc 111  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36018530 ctcctttggtttccatgagattcaccaagcttatccaacaaatgggtcaaagaatgcatatgtagtgttcagatccgggcaaaatcgtgtcacgttttcc 36018431  T
Q  112 caaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaat 211  Q
    ||||||||||||  ||||||||            |||| |||||||||||||| |||||| | ||||||||||||||||  |||||| ||||||||||||    
T  36018430 caaatcgtgacatggttggtgc------------gtacgaccaaccttatcctaaaaacgtgcccagcaagccgaaaattgtgtcacgttttcccaaaat 36018343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 6096076 - 6096295
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattgg-tcatagaatgcatatgcagtgttcagatccgggcaaaatcgt 99  Q
    |||||||||  ||||| || ||||||||||||||||||||||| ||||||||| ||| ||| ||||||||||| | ||||||| |||| | |||||||||    
T  6096076 ctaaaagttctctcctctgatttccatgagattcaccaagctttcccaacaaaatgggtcaaagaatgcatatactgtgttcatatcctgacaaaatcgt 6096175  T
Q  100 gtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcaca 199  Q
    |||| | |||||||||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||   |||||  |||||||||||| ||||||     
T  6096176 gtcatgatttcccaaatcgtgacacatttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatttgtccaataagccgaaaatcgtgtcacg 6096275  T
Q  200 ttttcccaaaatcgtgtcac 219  Q
    ||||||||||||||||||||    
T  6096276 ttttcccaaaatcgtgtcac 6096295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 43402267 - 43402486
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| ||||||||||||||||| |||||||||||||| |||||||||||  |||| |||||||||||    |||||||||| |  ||||||| ||    
T  43402267 ctaaaagttccctcctttggtttccataagattcaccaagctcacccaacaaatgagtcaaagaatgcatatattatgttcagatcagaacaaaatcatg 43402366  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||||  |||||||||||||||||   ||||||||||| ||||||| ||||||||||||||||||||||||  | ||||||||||||||||| |||||| |    
T  43402367 tcacaatttcccaaatcgtgacacgtttggtgcgtacgacccaagatacaaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgt 43402466  T
Q  201 tttcccaaaatcgtgtcacg 220  Q
    ||  ||||||||||||||||    
T  43402467 ttctccaaaatcgtgtcacg 43402486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 54593395 - 54593176
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||  | ||||||| |||||| || ||| ||   ||||||||||| ||||||||||||||    
T  54593395 ctaaaagttccctcctttggtttccatgagattcaccaagcttttcgaacaaatgggtcatggagtgcttacatagtgttcagattcgggcaaaatcgtg 54593296  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||| | |||||||||||||||||   ||||||||||| |||||| |||| ||||||||||||||||||||| | ||||||||  ||||||| |||||| |    
T  54593295 tcatgatttcccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgt 54593196  T
Q  201 tttcccaaaatcgtgtcacg 220  Q
    ||||||||||| | ||||||    
T  54593195 tttcccaaaattgagtcacg 54593176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 31340518 - 31340739
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    |||||||||  |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||   ||||||||||| || ||||||| ||    
T  31340518 ctaaaagttctctcctttggtttccataagattcaccaagcttacccaacaaatgggtcaaagaatgcatatattgtgttcagatctggacaaaatcatg 31340617  T
Q  101 tcacgttttccc-aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtca-c 198  Q
    ||||| |||||| |||||||| ||   ||||||||||| ||||||||||| ||||||||||||||||||||  | ||| ||||||||||||| |||||      
T  31340618 tcacgatttcccaaaatcgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccaacaagccgaaaatcgtgtcatg 31340717  T
Q  199 attttcccaaaatcgtgtcacg 220  Q
     ||||||||||||| |||||||    
T  31340718 tttttcccaaaatcatgtcacg 31340739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 40913029 - 40912809
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagctt-acccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgt 99  Q
    ||||||||  ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||| ||   ||||||||||||||| |||||||||    
T  40913029 ctaaaagtcccctcctttggtttccatgagattcaccaagctttacccaacaaatgggtcaaagaatgcttacatagtgttcagatccggacaaaatcgt 40912930  T
Q  100 gtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcaca 199  Q
    |||| | |||||||||||||||||   ||||||||||| | ||||| ||| |||| |||||||| ||||||  | ||| ||||||||||||| ||||||     
T  40912929 gtcatgatttcccaaatcgtgacacgtttggtgcgtacgatccaagatacgaccagccttatccagaaaacttgcccaacaagccgaaaatcgtgtcacg 40912830  T
Q  200 ttttcccaaaatcgtgtcacg 220  Q
    |||||||||||| || |||||    
T  40912829 ttttcccaaaattgtatcacg 40912809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 49199948 - 49200147
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||   |||||||||||||| ||||||||||    
T  49199948 ctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcaaagaatgcatatattgtgttcagatccggacaaaatcgtg 49200047  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
     ||| |                    ||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||||||||||||| |||||| |    
T  49200048 acacat--------------------ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatgcccagcaagccgaaaatcgtgtcacgt 49200127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 29812882 - 29812753
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||||| |||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | |||||||| | |||||    
T  29812882 caaaatcgtgtcacgtttttccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagacaaaaat 29812783  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| |||||||||||||||||||||    
T  29812782 cgtgtcacgttttcccaaaatcgtgtcacg 29812753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 5236806 - 5236935
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||||| |||||||||||||   ||||||||||| ||||||||||| ||||| ||||||||||||||    ||||||||||||||||    
T  5236806 caaaatcgtgtcacgttttgccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaacttatcctgaaaactttcccagcaagccgaaaat 5236905  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| |||||||||||| ||||||||    
T  5236906 cgtgtcacgttttcccaaaattgtgtcacg 5236935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 40592486 - 40592357
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||||  |||||||||||||   |||||| |||| | ||||||||| ||||||||||||||||||||| ||||||||||  ||||||    
T  40592486 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgtgtacgatccaaggtacgaccaaccttatcctgaaaacgtgtccagcaagttgaaaat 40592387  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| |||||||||||||||| ||||    
T  40592386 cgtgtcacgttttcccaaaatcgtgacacg 40592357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 29810687 - 29810558
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||   |||||||||||| |||||    
T  29810687 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatttgtccagcaagccaaaaat 29810588  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
      ||  || |||| | ||||||||||||||    
T  29810587 tgtgctacgtttttctaaaatcgtgtcacg 29810558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 186 - 295
Target Start/End: Complemental strand, 30235724 - 30235616
Alignment:
Q  186 aaaatcttgtcacattttcccaaaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtc 285  Q
    |||||| |||||| |||||| |||||||||||||||||||||| ||| ||||| |||||||||  |||||||||||||||||||| || |||||||||||    
T  30235724 aaaatcgtgtcacgttttcc-aaaatcgtgtcacgttttgccttcagaaccaaacatgcattcggcatcagaaatcgtgacacggttgccaaatcgtgtc 30235626  T
Q  286 acgattcttc 295  Q
    ||||||||||    
T  30235625 acgattcttc 30235616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 8127012 - 8127141
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||||  |||||||||||||  ||||||| |||| ||||||| ||| |||||||||||||||||||||   | ||||||  ||||||    
T  8127012 caaaatcgtgtcacgtttgtccaaatcgtgacacggttggtgtgtacgacccaagatacgaccaaccttatcctgaaaacgtacctagcaagttgaaaat 8127111  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | ||||||| ||||||||||||||| ||||    
T  8127112 cgtgtcacactttcccaaaatcgtgacacg 8127141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 44331352 - 44331259
Alignment:
Q  127 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||   |||||||||| |||||| |||||| |||||||||||||||||||||    
T  44331352 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagccaaaaatcgtgtcactttttcccaaaatcgtgtcacg 44331259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 1736008 - 1735884
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||||||||||||||| |||||||||||||| |||| | |||   ||||  ||||||    
T  1736008 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaatgtgtcattcaagttgaaaat 1735909  T
Q  191 cttgtcacattttcccaaaatcgtg 215  Q
    | |||||| ||||||||||||||||    
T  1735908 cgtgtcacgttttcccaaaatcgtg 1735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 24694870 - 24694779
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag 182  Q
    ||||||||||| ||||||  |||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  24694870 caaaatcgtgttacgtttgtccaaatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctgaaaacgtgtccagcaag 24694779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 113 - 220
Target Start/End: Complemental strand, 34490811 - 34490704
Alignment:
Q  113 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatc 212  Q
    |||||||||||   ||||||||||| ||||||||||||||||||||||||||||||||  | |||  |||||||||||| |||||| |||| ||||||||    
T  34490811 aaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacttgcccaataagccgaaaatcgtgtcacgtttttccaaaatc 34490712  T
Q  213 gtgtcacg 220  Q
    ||||||||    
T  34490711 gtgtcacg 34490704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 8370193 - 8370064
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaa-gccgaaaa 189  Q
    ||||||||||||||||||||| |||||||||||   ||||||||||||||||||||||| |||||||||||||| ||||||   |||||||    |||||    
T  8370193 caaaatcgtgtcacgttttcc-aaatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaacgttcccagcaattttgaaaa 8370095  T
Q  190 tcttgtcacattttcccaaaatcgtgtcacg 220  Q
    || |||||| |||||||||||||||| ||||    
T  8370094 tcgtgtcacgttttcccaaaatcgtgacacg 8370064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 220
Target Start/End: Complemental strand, 46173318 - 46173206
Alignment:
Q  107 tttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttccc 206  Q
    |||||||| ||||||||  |||||||||||| ||||||||||| ||||||||||||||||||||| | ||| |||||||  |||| |||||  |||||||    
T  46173318 tttcccaattcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccaacaagccg-gaatcgtgtcatgttttccc 46173220  T
Q  207 aaaatcgtgtcacg 220  Q
    ||||||||||||||    
T  46173219 aaaatcgtgtcacg 46173206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28074308 - 28074248
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcat 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28074308 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcat 28074248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 93 - 212
Target Start/End: Original strand, 40845037 - 40845157
Alignment:
Q  93 aaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcct-gaaaacgggtccagcaagccgaaaatc 191  Q
    |||| |||||||||||  |||||||||||||   ||||||||||||||||||||||| ||||||||||||||  |||||| |||||||| |  |||||||    
T  40845037 aaattgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaaacgtgtccagcacgttgaaaatc 40845136  T
Q  192 ttgtcacattttcccaaaatc 212  Q
     |||||| |||||||||||||    
T  40845137 gtgtcacgttttcccaaaatc 40845157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 48438598 - 48438727
Alignment:
Q  92 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaat 190  Q
    |||||||||||||||||  |||||||||||||   ||||||||||| | |||||||||||||||||||||||||||||||   ||| ||||   ||||||    
T  48438598 aaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgatccaaggtacaaccaaccttatcctgaaaacgtacccatcaagtttgaaaat 48438697  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| ||| |||||||||||| ||||    
T  48438698 cgtgtcacgtttccccaaaatcgtgacacg 48438727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 16264731 - 16264860
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 189  Q
    ||||||||||||||| ||||| |||||||| ||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||| ||   |||||    
T  16264731 caaaatcgtgtcacgctttcc-aaatcgtggcacgattggtgcgtaccacccaaggtacgaccaaccttatcctgaaaacgtacccagctagtttgaaaa 16264829  T
Q  190 tcttgtcacattttcccaaaatcgtgtcacg 220  Q
    || |||||| |||||||||||||||| ||||    
T  16264830 tcgtgtcacgttttcccaaaatcgtgacacg 16264860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 36029475 - 36029605
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 189  Q
    |||||| |||||||||||| | ||| |||||||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   |||||    
T  36029475 caaaattgtgtcacgtttttctaaaccgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaa 36029574  T
Q  190 tcttgtcacattttcccaaaatcgtgtcacg 220  Q
    || |||||| |||| ||||||||||| ||||    
T  36029575 tcgtgtcacgtttttccaaaatcgtgacacg 36029605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 39032259 - 39032130
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 189  Q
    ||||||||||||||| ||| | |||||||| ||   ||||||||||| ||||||||||| |||||| ||||||||||||||   ||||||||   |||||    
T  39032259 caaaatcgtgtcacgattttc-aaatcgtggcacgattggtgcgtacgacccaaggtacgaccaactttatcctgaaaacgtacccagcaagtttgaaaa 39032161  T
Q  190 tcttgtcacattttcccaaaatcgtgtcacg 220  Q
    || ||||||||||||||||||||||| ||||    
T  39032160 tcgtgtcacattttcccaaaatcgtgacacg 39032130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 47923608 - 47923530
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 169  Q
    ||||||||||||||||||  |||||||||||||   ||| ||||||||||||||||||| |||||||||||||||||||    
T  47923608 caaaatcgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacaacccaaggtacgaccaaccttatcctgaaaa 47923530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 220
Target Start/End: Complemental strand, 7762082 - 7761954
Alignment:
Q  93 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||| |  | |||||||||| |||||    
T  7762082 aaatcgtgtcacgtttttccccaatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaat 7761983  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | ||||||  ||||||||||||||||||||    
T  7761982 cgtgtcac-gtttcccaaaatcgtgtcacg 7761954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 44331796 - 44331925
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||| || ||||||| ||||||||||||||   |||||| |||| ||||||||||| || ||| ||||| ||||||||   |||| ||||| |||||    
T  44331796 caaaatcatgccacgtttccccaaatcgtgacacatttggtgtgtacgacccaaggtacgactaactttatcttgaaaacgtacccaggaagccaaaaat 44331895  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| |||| ||||||||||||||||    
T  44331896 cgtgtcacgtttttccaaaatcgtgtcacg 44331925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 30709501 - 30709423
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 169  Q
    ||||||||||||||||||| |||||||||||||   ||||||||||| ||||||||||  ||||| |||||||||||||    
T  30709501 caaaatcgtgtcacgtttttccaaatcgtgacacgattggtgcgtacgacccaaggtaagaccaatcttatcctgaaaa 30709423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 93 - 220
Target Start/End: Complemental strand, 7764270 - 7764141
Alignment:
Q  93 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||| ||| |||| || ||   ||| ||||||| ||||||||||| |||||||||||||| |||| |  | ||| |||||| |||||    
T  7764270 aaatcgtgtcacgtttttccccaatcatgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatcttgcccaacaagccaaaaat 7764171  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| |||||||||||||||||||||    
T  7764170 cgtgtcacgttttcccaaaatcgtgtcacg 7764141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 5258492 - 5258623
Alignment:
Q  91 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 188  Q
    ||||||||||||||||||| ||| ||||||| ||   | | ||||||| |  |||||||| ||||||||||||||||||| |  | |||||||||| |||    
T  5258492 caaaatcgtgtcacgtttttccccaatcgtgccacaatcgatgcgtacgattcaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 5258591  T
Q  189 atcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||| ||||||  ||||||||||||||||||||    
T  5258592 atcgtgtcacgatttcccaaaatcgtgtcacg 5258623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 9636476 - 9636607
Alignment:
Q  91 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 188  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  ||||| |||||| |||    
T  9636476 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgtccatcaagccaaaa 9636575  T
Q  189 atcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||| |||||   |||||||||||| |||||||    
T  9636576 atcgtgtcatgatttcccaaaatcatgtcacg 9636607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 26323991 - 26324042
Alignment:
Q  2 taaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaa 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  26323991 taaaagtttcctcctttggtttccatgagattcaccaaacttactcaacaaa 26324042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 27027088 - 27027218
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaag-ccgaaa 188  Q
    ||||||||||||||||||||| ||| |||| ||   ||||||||||| ||||||||||| ||||||||||||||| |||| |   ||||||||   ||||    
T  27027088 caaaatcgtgtcacgttttccaaaa-cgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaaatgtagccagcaagtttgaaa 27027186  T
Q  189 atcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||| |||||| |||||||||||||||| ||||    
T  27027187 atcgtgtcacgttttcccaaaatcgtgacacg 27027218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 40735248 - 40735117
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaag-ccgaaa 188  Q
    ||||||||||||||||||  ||||||| | |||   ||||||||||| ||||||||||| ||||||||||||||| |||| |   ||||||||   ||||    
T  40735248 caaaatcgtgtcacgtttgtccaaatcataacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaaatgtagccagcaagtttgaaa 40735149  T
Q  189 atcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||| |||||| |||||||||||||||| ||||    
T  40735148 atcgtgtcacgttttcccaaaatcgtgacacg 40735117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 47303850 - 47303763
Alignment:
Q  208 aaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtcacgattcttc 295  Q
    ||||| ||||||||||||||| ||| ||| | |||||||||  ||||| |||||||| ||||| || |||||||||||||||||||||    
T  47303850 aaatcatgtcacgttttgccttcagaaccgaacatgcattcggcatcaaaaatcgtgtcacggttgccaaatcgtgtcacgattcttc 47303763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 23410681 - 23410759
Alignment:
Q  93 aaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 171  Q
    |||| |||||||||||| |||||||||||||  ||||||| | |||||||||||||| ||||| |||||| ||||||||    
T  23410681 aaattgtgtcacgttttgccaaatcgtgacacggttggtgtgaacaacccaaggtacgaccaaacttatcttgaaaacg 23410759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5434356 - 5434409
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaat 54  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||    
T  5434356 ctaaaagttccctcctttgatttccatgagattcaccaagcttactcaacaaat 5434409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 27038459 - 27038548
Alignment:
Q  127 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaatcttgtcacattttcccaaaatcgtg 215  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||    ||| ||||   ||||||| |||||||||||||||||||||||    
T  27038459 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatacccaacaagtttgaaaatcgtgtcacattttcccaaaatcgtg 27038548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 47303942 - 47303891
Alignment:
Q  2 taaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaa 53  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||||||    
T  47303942 taaaagttctctcctttgatttccatgagattcaccaagcttacccaacaaa 47303891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 21711603 - 21711713
Alignment:
Q  111 ccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaatcttgtcacattttcccaaa 209  Q
    |||||||||||||   ||||||||||| ||||||||||| ||||||||||||| |||||||    |||||||   ||||||  |||||| ||||||||||    
T  21711603 ccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatccggaaaacgtactcagcaagtttgaaaattgtgtcacgttttcccaaa 21711702  T
Q  210 atcgtgtcacg 220  Q
    |||||| ||||    
T  21711703 atcgtgacacg 21711713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 40734317 - 40734239
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 169  Q
    |||||| |||||||||||  |||||||||||||   ||| ||||||| | ||||||||| |||||||||||||||||||    
T  40734317 caaaattgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 40734239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 30235816 - 30235696
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaac-aaattggtcatagaatgcatatgcagtg-ttcagatccgggcaaaatcg 98  Q
    |||||||||  |||||||||||||  |||||||||||||||||||||||| |||| |||||| || ||| ||    ||| ||||||| | | ||||||||    
T  30235816 ctaaaagttctctcctttggtttcattgagattcaccaagcttacccaacaaaatgggtcatggagtgcttaaaatgtgtttcagat-ctgtcaaaatcg 30235718  T
Q  99 tgtcacgttttcccaaatcgtg 120  Q
    ||||||||||||| ||||||||    
T  30235717 tgtcacgttttccaaaatcgtg 30235696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 34795549 - 34795456
Alignment:
Q  12 ctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacg 105  Q
    |||||||||||| |||  |||||||||| ||||||||||||||  |||||||| ||| |||  | |||||| || | |||||||||||||||||    
T  34795549 ctcctttggttttcataggattcaccaaacttacccaacaaataagtcatagagtgcttatatactgttcaaattcaggcaaaatcgtgtcacg 34795456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 220
Target Start/End: Complemental strand, 45094982 - 45094853
Alignment:
Q  93 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||| ||| ||||||| ||   ||| |||||||   ||||||||| ||||||||||||||||||| |  | ||| |||||| |||||    
T  45094982 aaatcgtgtcacgtttttccccaatcgtgtcacgattgatgcgtacgttccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 45094883  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | ||||||  ||||||||||| ||||||||    
T  45094882 cgtgtcacgatttcccaaaattgtgtcacg 45094853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34490904 - 34490862
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagctt 43  Q
    |||||||||  ||||||||||||||||||||||||||||||||    
T  34490904 ctaaaagttctctcctttggtttccatgagattcaccaagctt 34490862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41819998 - 41820040
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagctt 43  Q
    |||||||||  ||||||||||||||||||||||||||||||||    
T  41819998 ctaaaagttatctcctttggtttccatgagattcaccaagctt 41820040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 16498840 - 16498756
Alignment:
Q  133 cgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||| ||||| ||||| |||||||||||   |  |||| ||| ||||||||||||||| || ||||||||||||||||||| |||||    
T  16498840 cgtacgacccacggtacgaccaaccttat---gtcaacgtgtcaagcaagccgaaaatcgtgacacattttcccaaaatcgtatcacg 16498756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 25929100 - 25929023
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaa 168  Q
    ||||||||||||||| ||  ||||||||| |||  |||||| ||||| | |||| |||| ||||||||||||||||||    
T  25929100 caaaatcgtgtcacgattggccaaatcgtaacacggttggtacgtacgatccaatgtacgaccaaccttatcctgaaa 25929023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 31340775 - 31340820
Alignment:
Q  257 aaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 302  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||    
T  31340775 aaatcgtgacacggttgccaaatcgtgtcacgattcttcactttct 31340820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 35139201 - 35139250
Alignment:
Q  11 cctcctttggtttccatgagattcaccaagcttacccaacaaattggtca 60  Q
    ||||||||||||||||||| |||||||||||||||  ||||||| |||||    
T  35139201 cctcctttggtttccatgaaattcaccaagcttacttaacaaatgggtca 35139250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 34490669 - 34490623
Alignment:
Q  256 gaaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 302  Q
    ||||||||||||||| || |||||||||||| |||||||| ||||||    
T  34490669 gaaatcgtgacacggttgccaaatcgtgtcatgattcttcactttct 34490623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 37726058 - 37726135
Alignment:
Q  92 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 170  Q
    ||||||||| |||||||||| |||||||| ||   ||| | ||||| |||||| |||| ||||||||||||||||||||    
T  37726058 aaaatcgtgccacgttttcc-aaatcgtgtcacgattgatacgtacgacccaatgtacgaccaaccttatcctgaaaac 37726135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 44331223 - 44331177
Alignment:
Q  256 gaaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 302  Q
    ||||||||||||||| || |||| |||||||||||||||| ||||||    
T  44331223 gaaatcgtgacacggttgccaaagcgtgtcacgattcttcactttct 44331177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 51398633 - 51398587
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtac 137  Q
    |||||||||||||| ||||||||||||||||||   |||||||||||    
T  51398633 caaaatcgtgtcacattttcccaaatcgtgacacgtttggtgcgtac 51398587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 3393341 - 3393296
Alignment:
Q  175 ccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    |||||||||| |||||| ||||||  ||||||||||||||||||||    
T  3393341 ccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacg 3393296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 37408236 - 37408199
Alignment:
Q  133 cgtacaacccaaggtacaaccaaccttatcctgaaaac 170  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  37408236 cgtacgacccaaggtacgaccaaccttatcctgaaaac 37408199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39127250 - 39127197
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaat 54  Q
    |||||||||  |||| ||| |||||||||||||||| |||||||| ||||||||    
T  39127250 ctaaaagttctctccgttgatttccatgagattcactaagcttactcaacaaat 39127197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 46860161 - 46860120
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagct 42  Q
    |||||||||  ||| |||||||||||||||||||||||||||    
T  46860161 ctaaaagttctctcatttggtttccatgagattcaccaagct 46860120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 51398590 - 51398517
Alignment:
Q  146 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcac 219  Q
    |||| ||||||| |||||| |||||  | ||| ||| ||||||||  |||||| ||||||||||||||||||||    
T  51398590 gtacgaccaaccatatcctaaaaacttgcccaacaaaccgaaaattgtgtcacgttttcccaaaatcgtgtcac 51398517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 27974615 - 27974579
Alignment:
Q  133 cgtacaacccaaggtacaaccaaccttatcctgaaaa 169  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  27974615 cgtacgacccaaggtacaaccaaccttatcatgaaaa 27974579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 35925908 - 35925952
Alignment:
Q  127 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 171  Q
    |||||||||||| | ||| |||| |||||||||||||||||||||    
T  35925908 ttggtgcgtacatctcaatgtacgaccaaccttatcctgaaaacg 35925952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 7019 - 6848
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||  |||||||| ||||| ||||||||||     
T  7019 ctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcaaagaatgcatataaagtgttcatatccgagcaaaatcgta 6920  T
Q  101 tcacgttttcc-caaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 171  Q
    ||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||    
T  6919 tcacgttttccacaaatcgtgacatggttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacg 6848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 1e-60; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 6360389 - 6360607
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||   |||||||||||||| ||||||||||    
T  6360389 ctaaaagttctctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcaaagaatgcttataatgtgttcagatccggacaaaatcgtg 6360488  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||||  |||||||||||||||||   ||||||||||| ||||||| ||| |||||| |||||||||||||  | ||| ||||||||||||| |||||| |    
T  6360489 tcacaatttcccaaatcgtgacacgtttggtgcgtacgacccaagatacgaccaacattatcctgaaaacttgcccaacaagccgaaaatcgtgtcacgt 6360588  T
Q  201 tttcccaaaatcgtgtcac 219  Q
    || ||||||||||||||||    
T  6360589 ttccccaaaatcgtgtcac 6360607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 32358313 - 32358532
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||   |||||||| |||||| || ||| ||   ||||||||||||||| ||||||||||    
T  32358313 ctaaaagttccctcctttggtttccatgagattcaccaagctttttcaacaaatgggtcatggagtgcttacatagtgttcagatccggacaaaatcgtg 32358412  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||||  ||| ||||||| |||||   ||||||||||| | ||||||||| | |||| |||||||||||||| | ||||||||| ||||||  |||||| |    
T  32358413 tcacaattttccaaatcatgacacgtttggtgcgtacgatccaaggtacgatcaactttatcctgaaaacgtgcccagcaagctgaaaattgtgtcacgt 32358512  T
Q  201 tttcccaaaatcgtgtcacg 220  Q
    |||||||||||||| |||||    
T  32358513 tttcccaaaatcgtatcacg 32358532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 47674292 - 47674421
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||| ||||| ||||||| |||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||  | ||||||||||||||||    
T  47674292 caaaatcatgtcatgttttccaaaatcgtgacacgtttggtgcgtacaacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaat 47674391  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| |||||||||||||||||||||    
T  47674392 cgtgtcacgttttcccaaaatcgtgtcacg 47674421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 47676485 - 47676614
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||| |||||||||||||| |||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||||||||||||    
T  47676485 caaaattgtgtcacgttttccaaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaat 47676584  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| |||||||||||||||||||||    
T  47676585 cgtgtcacgttttcccaaaatcgtgtcacg 47676614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 27347742 - 27347614
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||||||||||| |||||||||| |||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||||||||||||    
T  27347742 caaaatcgtgtcacattttcccaaaccgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaat 27347643  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||  |||||||||||||||||||||    
T  27347642 catgtca-gttttcccaaaatcgtgtcacg 27347614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 48599801 - 48599923
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||   |||||||||| ||| |||||| |||    
T  48599801 ctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaatgggtaaaagaatgcatatattgtgttcagattcggacaaaattgtg 48599900  T
Q  101 tcacgttttcccaaatcgtgaca 123  Q
    ||| | |||||| ||||||||||    
T  48599901 tcatgatttccccaatcgtgaca 48599923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 2647412 - 2647283
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||| ||||||||  |||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||  ||||||    
T  2647412 caaaatcgtatcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaat 2647313  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| |||||||||||||||| ||||    
T  2647312 catgtcacgttttcccaaaatcgtgacacg 2647283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 14070182 - 14070312
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaa 189  Q
    |||||||||||||||||||||||||||||||||   ||||||| ||| ||||||||||| |||||||||||| |||||| |  | | |||||| ||||||    
T  14070182 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcttgaaaaacttgcctagcaagtcgaaaa 14070281  T
Q  190 tcttgtcacattttcccaaaatcgtgtcacg 220  Q
    || |||||| |||||||||||||||||||||    
T  14070282 tcgtgtcacgttttcccaaaatcgtgtcacg 14070312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 14380210 - 14380340
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaa 189  Q
    |||||||||||||||||||||||||||||||||   ||||||| ||| ||||||||||| |||||||||||| |||||| |  | | |||||| ||||||    
T  14380210 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcttgaaaaacttgcctagcaagtcgaaaa 14380309  T
Q  190 tcttgtcacattttcccaaaatcgtgtcacg 220  Q
    || |||||| |||||||||||||||||||||    
T  14380310 tcgtgtcacgttttcccaaaatcgtgtcacg 14380340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 4585980 - 4585851
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||||||||||| ||||||||||||||||||   ||||||||||| ||||||||||| |||||||||||  |||||||    ||| |||||| |||||    
T  4585980 caaaatcgtgtcacattttcccaaatcgtgacatgtttggtgcgtacgacccaaggtacgaccaaccttatattgaaaacttacccaacaagccaaaaat 4585881  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    |||||||| |||||||||||| ||||||||    
T  4585880 cttgtcacgttttcccaaaatagtgtcacg 4585851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 18126463 - 18126339
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||| ||||||||||| |||||| |||||||||||||  | ||| ||||||||||||    
T  18126463 caaaatcgtgtcacgttttctcaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaacattatcctgaaaacttgcccaacaagccgaaaat 18126364  T
Q  191 cttgtcacattttcccaaaatcgtg 215  Q
    | | |||| |||| |||||||||||    
T  18126363 cgtatcacgtttttccaaaatcgtg 18126339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 91 - 219
Target Start/End: Complemental strand, 26417132 - 26417004
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||| ||  |||||||||||||  |||||||||||| ||||||||||| |||||||||| |||||||||  ||||| ||| |  |||||    
T  26417132 caaaatcgtgtcacgattggccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttaccctgaaaacttgtccaacaaactaaaaat 26417033  T
Q  191 cttgtcacattttcccaaaatcgtgtcac 219  Q
    | |||||||||| ||||||||||||||||    
T  26417032 cgtgtcacatttccccaaaatcgtgtcac 26417004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 2761651 - 2761758
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||| ||||| ||||||||||||||  | ||||||||| ||||||    
T  2761651 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaatcttatcctgaaaacttgcccagcaagctgaaaat 2761750  T
Q  191 cttgtcac 198  Q
    | ||||||    
T  2761751 cgtgtcac 2761758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 48489249 - 48489120
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||| ||||||||||| |||||||||||||   ||||||||||||||||||||||  ||||||||||||||| || |  | |||||||||| ||||     
T  48489249 caaaatcatgtcacgttttgccaaatcgtgacacgattggtgcgtacaacccaaggtatgaccaaccttatcctggaagcatgcccagcaagccaaaaac 48489150  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| ||||||| |||||||||||||    
T  48489149 cgtgtcacgttttccctaaatcgtgtcacg 48489120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 29608432 - 29608296
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||   ||||| || ||||| ||||||| |||   |||||||||||||| ||||||||||    
T  29608432 ctaaaagttccctcctttggtttccatgagattcaccaagctttatcaacatatgggtcaaagaatgcttatattgtgttcagatccggacaaaatcgtg 29608333  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtac 137  Q
    ||| | ||||| |||| ||||||   |||||||||||    
T  29608332 tcatgatttcctaaattgtgacacgtttggtgcgtac 29608296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 2361448 - 2361555
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| |||||||||||||||||||||||||| |||||| |||||||||| ||||| ||||||| |||   ||||||||||| || ||||||||||    
T  2361448 ctaaaagttccctcctttggtttccatgagattcactaagcttgcccaacaaatgggtcaaagaatgcttataatgtgttcagatctggacaaaatcgtg 2361547  T
Q  101 tcacgttt 108  Q
     |||||||    
T  2361548 acacgttt 2361555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 30814456 - 30814343
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg-ttcagatccgggcaaaatcgt 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||    ||| ||||||| | | |||||||||    
T  30814456 ctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcaaagaatgcttaaaacgtgtttcagat-ctgtcaaaatcgt 30814358  T
Q  100 gtcacgttttcccaa 114  Q
    |||||||||||||||    
T  30814357 gtcacgttttcccaa 30814343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 4538900 - 4539029
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||||||||||  |||| |||||||||||||   ||||||||||| | ||||||||| ||||||||| ||||||||||  |   ||||| ||||||||    
T  4538900 caaaatcgtgtcatattttgccaaatcgtgacacgtttggtgcgtacgatccaaggtacgaccaaccttgtcctgaaaacttgcttagcaaaccgaaaat 4538999  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| |||||||||||||||||||||    
T  4539000 cgtgtcacgttttcccaaaatcgtgtcacg 4539029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 113 - 220
Target Start/End: Complemental strand, 2389871 - 2389764
Alignment:
Q  113 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatc 212  Q
    |||||||||||   |||||| |||| | ||||||||| |||||||||||||||||||||   ||||||||| ||||||| |||||||||||| |||||||    
T  2389871 aaatcgtgacacgtttggtgtgtacgatccaaggtacgaccaaccttatcctgaaaacgttcccagcaagctgaaaatcgtgtcacattttctcaaaatc 2389772  T
Q  213 gtgtcacg 220  Q
    ||||||||    
T  2389771 gtgtcacg 2389764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 48491397 - 48491290
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||| ||||||||||| |||||||||||||  |||||||||||| ||||||||||| |||||||| ||| ||||| || | ||| ||||||||||||    
T  48491397 caaaatcatgtcacgttttgccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaacctaatcttgaaagcgtgcccaacaagccgaaaat 48491298  T
Q  191 cttgtcac 198  Q
    | ||||||    
T  48491297 cgtgtcac 48491290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 21983625 - 21983704
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 171  Q
    ||||||||||||||||||||| |||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||||    
T  21983625 caaaatcgtgtcacgttttcc-aaatcgtgacacaattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacg 21983704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 33332165 - 33332041
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||  ||  |||||||||||||   ||||||||||| ||||||||||| |||||||||||| |||||| | | ||||||||  ||||||    
T  33332165 caaaatcgtgtcacaattgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcttgaaaatgtgcccagcaagttgaaaat 33332066  T
Q  191 cttgtcacattttcccaaaatcgtg 215  Q
    | |||||| |||| |||||||||||    
T  33332065 cgtgtcacgtttttccaaaatcgtg 33332041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 91 - 230
Target Start/End: Original strand, 496343 - 496481
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||| |||||||| || |||||||||||  |||| ||||||| || ||||||| | |||||||||||||||||| | ||| |||| ||| ||||     
T  496343 caaaatcgtatcacgtttcccaaaatcgtgacacggttgatgcgtacgactcaaggtaaatccaaccttatcctgaaaatgtgtcaagcatgccaaaaac 496442  T
Q  191 cttgtcacattttcccaaaatcgtgtcacgttttgcctcc 230  Q
    | || ||| ||||||| ||||| |||||||||||||||||    
T  496443 cgtgacacgttttccc-aaatcatgtcacgttttgcctcc 496481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 23554860 - 23554729
Alignment:
Q  91 caaaatcgtgtcacgttttccca-aatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 188  Q
    |||||||||||||||||||||   ||||||| ||   ||| ||||||| |||||| |||| ||||||||||||||||||| |  | |||||||| |||||    
T  23554860 caaaatcgtgtcacgttttccattaatcgtgtcacgattgatgcgtacgacccaatgtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaa 23554761  T
Q  189 atcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||| |||||| |||||||||||||||||||||    
T  23554760 atcgtgtcacgttttcccaaaatcgtgtcacg 23554729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 43864044 - 43863951
Alignment:
Q  127 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||    | | ||| ||||||||| |||||| |||||||||||||||||||||    
T  43864044 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaactttcctaacaaaccgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 43863951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 4512866 - 4512985
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg-ttcagatccgggcaaaatcgt 99  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||  |||| |||||| || ||| ||    ||| ||||||| | | |||||||||    
T  4512866 ctaaaagttccctcctttggtttccatgagattcaccaagcttacccattaaatgggtcatggagtgcttaaaacgtgtttcagat-ctgtcaaaatcgt 4512964  T
Q  100 gtcacgttttcccaaatcgtg 120  Q
    |||||||||| ||||||||||    
T  4512965 gtcacgtttttccaaatcgtg 4512985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34311194 - 34311254
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcat 61  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34311194 ctaaaagttccttcctttggtttccatgagattcaccaagcttacccaaaaaattggtcat 34311254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 91 - 191
Target Start/End: Complemental strand, 46516023 - 46515923
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||||| |||||||||||||   ||||||| ||| |||||||||   ||||||||||||||||||||| | ||| |||||| |||||    
T  46516023 caaaatcgtgtcacgttttgccaaatcgtgacatgcttggtgcatacgacccaaggtgtgaccaaccttatcctgaaaacgtgcccaacaagccaaaaat 46515924  T
Q  191 c 191  Q
    |    
T  46515923 c 46515923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 49092071 - 49092203
Alignment:
Q  91 caaaatcgtgtcacgttttcc-caaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagc-cgaa 187  Q
    |||||||||||||||||||   ||||||||| || | ||||||| ||| | ||||||||| ||||||||||||||||||| ||   ||||||||  ||||    
T  49092071 caaaatcgtgtcacgttttgttcaaatcgtgtcactattggtgcatacgatccaaggtacgaccaaccttatcctgaaaaacgtacccagcaagttcgaa 49092170  T
Q  188 aatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    |||| ||||||||||||||||||||||| ||||    
T  49092171 aatcgtgtcacattttcccaaaatcgtgacacg 49092203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 1113475 - 1113368
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||||| ||||  |||||||   ||||||||||| ||||||||||| |||||||||||||||||||   | ||| || |||||||||    
T  1113475 caaaatcgtgtcacgttttgccaatacgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatttgcccatcaggccgaaaat 1113376  T
Q  191 cttgtcac 198  Q
    | ||||||    
T  1113375 cgtgtcac 1113368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4509174 - 4509237
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcataga 64  Q
    ||||||||| | ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  4509174 ctaaaagttccatcctttggtttccatgagattaaccaagcttacccaacaaatgggtcataga 4509237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4511016 - 4511079
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcataga 64  Q
    ||||||||| | ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  4511016 ctaaaagttccatcctttggtttccatgagattaaccaagcttacccaacaaatgggtcataga 4511079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 4796384 - 4796255
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||||  | |||| |||| |   ||||||||||| | ||||||||| ||||||  ||||||||||||| | ||| ||||  ||||||    
T  4796384 caaaatcgtgtcacgtttgtctaaattgtgatacatttggtgcgtacgatccaaggtacgaccaactctatcctgaaaacgtgcccatcaagttgaaaat 4796285  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| |||| ||||||||||||||||    
T  4796284 cgtgtcacgtttttccaaaatcgtgtcacg 4796255  T

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Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6431662 - 6431602
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcat 61  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||| |||| ||||||    
T  6431662 ctaaaagttccctcctttggtttctatgagattcaccaagcttacccaataaatgggtcat 6431602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22269665 - 22269605
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcat 61  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  22269665 ctaaatgttccctcctttggtttccatgagattcaccaagcttgcccaacaaatgggtcat 22269605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 220
Target Start/End: Complemental strand, 19495789 - 19495659
Alignment:
Q  93 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagcc-gaaaa 189  Q
    ||||||||||||||||| |||| |||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||| |  | ||||||||||  ||||    
T  19495789 aaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaaa 19495690  T
Q  190 tcttgtcacattttcccaaaatcgtgtcacg 220  Q
    || || ||| |||||||||||| ||||||||    
T  19495689 tcgtggcacgttttcccaaaattgtgtcacg 19495659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 219
Target Start/End: Complemental strand, 6570412 - 6570284
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||| ||||||||| ||  |||||||||||||  |||| ||||||  ||||||||||| | |||||||||||| |||||| ||| |||| ||| |||||    
T  6570412 caaaaacgtgtcacgattggccaaatcgtgacacggttgatgcgtatgacccaaggtacgatcaaccttatcctaaaaacgtgtcaagcatgccaaaaat 6570313  T
Q  191 cttgtcacattttcccaaaatcgtgtcac 219  Q
    | ||||||  || || ||||| |||||||    
T  6570312 cgtgtcacgattgcctaaaattgtgtcac 6570284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 2389973 - 2389934
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaag 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2389973 ctaaaagtttcctcctttggtttccatgagattcaccaag 2389934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 4178595 - 4178464
Alignment:
Q  91 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 188  Q
    ||||||||||||||||||| ||| |||| || ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  | | | |||||| |||    
T  4178595 caaaatcgtgtcacgtttttccccaatcttgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcctaacaagccaaaa 4178496  T
Q  189 atcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||| ||||||  ||||||||||||||||||||    
T  4178495 atcgtgtcacgatttcccaaaatcgtgtcacg 4178464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22328877 - 22328930
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaat 54  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||  |||||||    
T  22328877 ctaaaagttttctcctttggtttccatgagattcactaagcttacttaacaaat 22328930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 30026391 - 30026477
Alignment:
Q  133 cgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||| || |||||||| ||||||||||||||| ||||| | || |||||| ||||||| |||||| ||| ||||||||| |||||||    
T  30026391 cgtacgactcaaggtacgaccaaccttatcctg-aaacgtgcccggcaagctgaaaatcgtgtcacgtttccccaaaatcatgtcacg 30026477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 2479719 - 2479796
Alignment:
Q  92 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 170  Q
    ||||||||| |||||||||| ||||| || ||   ||| ||||||| ||||||||||| ||||||||||||||||||||    
T  2479719 aaaatcgtgccacgttttcc-aaatcatgccatgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaac 2479796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 44847839 - 44847762
Alignment:
Q  92 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 170  Q
    ||||||||| |||||||||| |||||||| ||   ||| | ||||| ||||||||||| ||||||||||||||||||||    
T  44847839 aaaatcgtgccacgttttcc-aaatcgtgccacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 44847762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 47264026 - 47264103
Alignment:
Q  92 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 170  Q
    ||||||||| |||||||||| |||||||| |||  ||| | ||||| ||||||| ||| ||||||||||||||||||||    
T  47264026 aaaatcgtgccacgttttcc-aaatcgtgtcaagattgatacgtacgacccaagatacgaccaaccttatcctgaaaac 47264103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 220
Target Start/End: Original strand, 79773 - 79902
Alignment:
Q  94 aatcgtgtcacgttttc-ccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagcc-gaaaat 190  Q
    ||||||||||| ||||  ||||||||||||    ||||||| ||  |||||| |||| ||||||||||||||||||| ||   ||||||||   ||||||    
T  79773 aatcgtgtcacattttgtccaaatcgtgacgtgattggtgcatatgacccaatgtacgaccaaccttatcctgaaaaacgtacccagcaagtttgaaaat 79872  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||||||||||| ||||||||||| ||||    
T  79873 cttgtcacatttttccaaaatcgtgacacg 79902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 21989290 - 21989369
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 171  Q
    |||||||||||||| |||||| ||||| |||||   ||| ||||||  ||||||||||| | |||||||||||||||||||    
T  21989290 caaaatcgtgtcacattttcc-aaatcatgacacgattgctgcgtatgacccaaggtacgatcaaccttatcctgaaaacg 21989369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 3258686 - 3258647
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaag 40  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  3258686 ctaaaagttccctcctctggtttccatgagattcaccaag 3258647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 31733311 - 31733357
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtac 137  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||    
T  31733311 caaaatcgtgtcacgttttcccaaatcgttacacgtttggtgcgtac 31733357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 31733354 - 31733420
Alignment:
Q  146 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatc 212  Q
    |||| ||||||||||||||||||||  | ||||||||||||||||  |||||| ||| || ||||||    
T  31733354 gtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaattgtgtcacgtttccctaaaatc 31733420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 302
Target Start/End: Complemental strand, 48491250 - 48491208
Alignment:
Q  260 tcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 302  Q
    ||||||||||| || ||||||||||||||||||||| ||||||    
T  48491250 tcgtgacacggttgccaaatcgtgtcacgattcttcactttct 48491208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 24515110 - 24515187
Alignment:
Q  93 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 169  Q
    |||||||||| |||||| ||| ||||||| ||   ||| ||||||| | ||||||||| |||||||||||||||||||    
T  24515110 aaatcgtgtcgcgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 24515187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 34311334 - 34311379
Alignment:
Q  257 aaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 302  Q
    |||||||||||||  || ||||||||||||||||||||| ||||||    
T  34311334 aaatcgtgacacgtttgccaaatcgtgtcacgattcttcactttct 34311379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 123
Target Start/End: Original strand, 30025081 - 30025113
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgaca 123  Q
    ||||||||||||||||||| |||||||||||||    
T  30025081 caaaatcgtgtcacgttttgccaaatcgtgaca 30025113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 37033546 - 37033765
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| |||||||  ||||| ||||||| |||   |||||||||||||| |||||| |||    
T  37033546 ctaaaagttccctcctttggtttccatgagattcacccagcttactcaacaaaagggtcaaagaatgcttatattgtgttcagatccggacaaaattgtg 37033645  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||||| |||||||||||||||||   ||||||||||| ||||||||||||||||||||||||||||||||  | || ||||| |||||||| |||||  |    
T  37033646 tcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacttgccctgcaaggcgaaaatcgtgtcatgt 37033745  T
Q  201 tttcccaaaatcgtgtcacg 220  Q
    || || ||||||||||||||    
T  37033746 ttcccgaaaatcgtgtcacg 37033765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 13547566 - 13547754
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    |||||||||  ||||||||||||||||||||||||||||||||||| ||||||| ||||| | |||||||||| |||||||||||||||| |||||||||    
T  13547566 ctaaaagttctctcctttggtttccatgagattcaccaagcttaccaaacaaatgggtcaaaaaatgcatatgtagtgttcagatccgggtaaaatcgtg 13547665  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    | | |||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||  |||||||| | ||||||||| ||||||    
T  13547666 ttatgttttcccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttat-ttgaaaacgtgcccagcaagctgaaaat 13547754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 13549477 - 13549665
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    |||||||||  ||||||||||||||||||||||||||||||||||| ||||||| ||||| | |||||||||| |||||||||||||||| |||||||||    
T  13549477 ctaaaagttctctcctttggtttccatgagattcaccaagcttaccaaacaaatgggtcaaaaaatgcatatgtagtgttcagatccgggtaaaatcgtg 13549576  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    | | |||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||  |||||||| | ||||||||| ||||||    
T  13549577 ttatgttttcccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttat-ttgaaaacgtgcccagcaagctgaaaat 13549665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 193303 - 193086
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| | |||   |||||||||||||| ||||||||||    
T  193303 ctaaaagttatctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcaaagaatacttatattgtgttcagatccggacaaaatcgtg 193204  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||||| |||||||||||| ||||   ||||||||||| ||||||||||| ||||| |||||||| |||||  | ||||||||||||||||  | |||| |    
T  193203 tcacgatttcccaaatcgcgacacgtttggtgcgtacgacccaaggtacgaccaatcttatcctaaaaacttgcccagcaagccgaaaatggtatcacgt 193104  T
Q  201 tttcccaaaatcgtgtca 218  Q
    ||| ||||||| ||||||    
T  193103 ttttccaaaattgtgtca 193086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 44454978 - 44454849
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||||||| |||||||| |||||||||||||   || |||||||| |||||||||||||||||||||||| |||||||  | ||||||||||||||||    
T  44454978 caaaatcgtgccacgttttgccaaatcgtgacacgtttagtgcgtacgacccaaggtacaaccaaccttatcttgaaaacttgcccagcaagccgaaaat 44454879  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| ||| |||||||||||||||||    
T  44454878 cgtgtcacgtttccccaaaatcgtgtcacg 44454849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 31659057 - 31658928
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||||||||||| |||| |||||||||||||   ||||||||||| ||||||||||||||||||||||||||||||||    |||||||||  |||||    
T  31659057 caaaatcgtgtcacattttaccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaactttcccagcaagcaaaaaat 31658958  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
      |||||| |||||||||||||||||||||    
T  31658957 tgtgtcacgttttcccaaaatcgtgtcacg 31658928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 29135939 - 29135762
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||| |||   |||||||||||||| ||||||||||    
T  29135939 ctaaaagttccctcctttggtttccatgagattcaccaagcttactcaacaaatgggtcaaagaatgcttatattgtgttcagatccggacaaaatcgtg 29135840  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcac 198  Q
     |||||                    ||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||| ||||||| ||||||    
T  29135839 acacgt--------------------ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagctgaaaatcatgtcac 29135762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 13 - 220
Target Start/End: Original strand, 37879400 - 37879587
Alignment:
Q  13 tcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttccc 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||   |||||||||||||| |||||||||| || ||          
T  37879400 tcctttgatttccatgagattcaccaagcttacccaacaaatgggtcaaagaatgcatatattgtgttcagatccggacaaaatcgtgacatgt------ 37879493  T
Q  113 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatc 212  Q
                  ||||||||| | ||||||||||| |||||||||||||| |||||  |||||| |||| ||||||| ||||||||||| ||||||||    
T  37879494 --------------ttggtgcgtgcgacccaaggtacgaccaaccttatcctaaaaacttgtccagtaagctgaaaatcgtgtcacatttttccaaaatc 37879579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 28220575 - 28220705
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagc-aagccgaaaa 189  Q
    |||||||||||||||||||||||||||||||||   || |||||||| ||||||||||| |||||||||||| | || ||  |||  || ||||||||||    
T  28220575 caaaatcgtgtcacgttttcccaaatcgtgacacgttttgtgcgtacgacccaaggtacgaccaaccttatcttaaatacttgtcgtgcaaagccgaaaa 28220674  T
Q  190 tcttgtcacattttcccaaaatcgtgtcacg 220  Q
    || |||||| |||||||||||||||||||||    
T  28220675 tcgtgtcacgttttcccaaaatcgtgtcacg 28220705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 49918168 - 49918039
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||||||||||| ||||||||||||||||||   |||||| |||| ||||||||||  ||||||||||||||||||||| | ||||||||   |||||    
T  49918168 caaaatcgtgtcacattttcccaaatcgtgacacgattggtgtgtacgacccaaggtatgaccaaccttatcctgaaaacgtgcccagcaagttaaaaat 49918069  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| |||| | ||||||||||||||    
T  49918068 cgtgtcacgtttttcgaaaatcgtgtcacg 49918039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 30476797 - 30476904
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||||||||||||||||||||||||||||||   |||||| |||| ||||||||| |||||||||||||| |||||||  | ||||||| ||||||||    
T  30476797 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgtgtacgacccaaggttcaaccaaccttatcttgaaaacttgcccagcaaaccgaaaat 30476896  T
Q  191 cttgtcac 198  Q
    | ||||||    
T  30476897 cgtgtcac 30476904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 91 - 212
Target Start/End: Original strand, 13598782 - 13598904
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 189  Q
    ||||||||||||||||||  |||||| ||||||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   |||||    
T  13598782 caaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaa 13598881  T
Q  190 tcttgtcacattttcccaaaatc 212  Q
    || ||||||||||||||||||||    
T  13598882 tcgtgtcacattttcccaaaatc 13598904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 28223770 - 28223900
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagc-aagccgaaaa 189  Q
    |||||||||||||||||||||||||| ||||||   || |||||||| ||||||||||| |||||||||||| | || ||  |||  || ||||||||||    
T  28223770 caaaatcgtgtcacgttttcccaaattgtgacacgttttgtgcgtacgacccaaggtacgaccaaccttatcttaaatacttgtcgtgcaaagccgaaaa 28223869  T
Q  190 tcttgtcacattttcccaaaatcgtgtcacg 220  Q
    || |||||| |||||||||||||||||||||    
T  28223870 tcgtgtcacgttttcccaaaatcgtgtcacg 28223900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 219
Target Start/End: Complemental strand, 1833341 - 1833212
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtc-cagcaagccgaaaa 189  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||  |||||||||||| ||||||  |  | ||||||||| ||||    
T  1833341 caaaatcgtgtcacgttttcgcaaatcgtgacacgtttggtgcgtacaacccaaggtatgaccaaccttatcttgaaaaatgtactcagcaagccaaaaa 1833242  T
Q  190 tcttgtcacattttcccaaaatcgtgtcac 219  Q
    || ||| |  ||||||||||||||||||||    
T  1833241 tcgtgttatgttttcccaaaatcgtgtcac 1833212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 10925042 - 10924913
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||||| |||||||||||||  |||| ||||||  ||||||||||  |||||| ||||  |||||||  | | | ||||||||||||    
T  10925042 caaaatcgtgtcacgttttgccaaatcgtgacacggttgatgcgtatgacccaaggtatgaccaactttattttgaaaacttgcctaccaagccgaaaat 10924943  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | ||||||||||| ||||||||||||||||    
T  10924942 cgtgtcacatttttccaaaatcgtgtcacg 10924913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 42298542 - 42298642
Alignment:
Q  206 caaaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttcttaa 305  Q
    |||||||||||||| |||||||| ||| ||||| |||||||||  |||||||||||||||||||| || |||||||||||| |||||||| ||||| |||    
T  42298542 caaaatcgtgtcacattttgccttcagaaccaaacatgcattcggcatcagaaatcgtgacacggttgccaaatcgtgtcatgattcttcactttcataa 42298641  T
Q  306 a 306  Q
    |    
T  42298642 a 42298642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 4552997 - 4553126
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||| ||||||||||||| |||||||||||||  |||| ||||||| || || | ||| || |||||||||||||||||| ||| | |||| |||||||    
T  4552997 caaaaacgtgtcacgttttgccaaatcgtgacacggttgatgcgtacgactcacgatacgactaaccttatcctgaaaacgtgtcaaacaagtcgaaaat 4553096  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | | |||| ||||| |||||||||||||||    
T  4553097 catatcacgttttctcaaaatcgtgtcacg 4553126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19754182 - 19754122
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcat 61  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19754182 ctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcat 19754122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 47255811 - 47255871
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcat 61  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  47255811 ctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcat 47255871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6808137 - 6808084
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaat 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6808137 ctaaaagtttcctcctttggtttccatgagattcaccaagcttactcaacaaat 6808084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 3156636 - 3156552
Alignment:
Q  141 ccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacgttttg 225  Q
    ||||||||| ||||||||||||||||||||| ||||||||| || |||||| ||| |  ||||||||||||||||||||| ||||    
T  3156636 ccaaggtacgaccaaccttatcctgaaaacgtgtccagcaaaccaaaaatcgtgttatgttttcccaaaatcgtgtcacgatttg 3156552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 19752377 - 19752258
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg-ttcagatccgggcaaaatcgt 99  Q
    |||||| || |||| |||||||| |||||||||||||||||||||||||||||| |||||| || ||| ||    ||| ||||||||| | |||||||||    
T  19752377 ctaaaaattccctcatttggttttcatgagattcaccaagcttacccaacaaatgggtcatggagtgcttaaaacgtgtttcagatcc-gtcaaaatcgt 19752279  T
Q  100 gtcacgttttcccaaatcgtg 120  Q
    |||||||||||||| ||||||    
T  19752278 gtcacgttttcccatatcgtg 19752258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 220
Target Start/End: Complemental strand, 11348298 - 11348191
Alignment:
Q  113 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatc 212  Q
    |||||||||||   ||||||||||| | |||| |||| ||||||||||||||||||||  | ||| ||||||||||||| |||||| |||  ||||||||    
T  11348298 aaatcgtgacacgtttggtgcgtacgatccaatgtacgaccaaccttatcctgaaaacttgcccaacaagccgaaaatcgtgtcacgtttctccaaaatc 11348199  T
Q  213 gtgtcacg 220  Q
    ||||||||    
T  11348198 gtgtcacg 11348191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 11348389 - 11348283
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||| || | | |||  |||||| |||||| | ||||||||||    
T  11348389 ctaaaagttccatcctttggtttccatgagattcactaagcttacccaacaaatgggtcatggagtacttatatagtgtttagatcc-gacaaaatcgtg 11348291  T
Q  101 tcacgttt 108  Q
     |||||||    
T  11348290 acacgttt 11348283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 34602816 - 34602879
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcataga 64  Q
    ||||||||| |||||||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  34602816 ctaaaagttccctcctttggtttccatgagattcaccaagcttttccaacaaatgggtcataga 34602879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34603267 - 34603204
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcataga 64  Q
    ||||||||| |||||||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  34603267 ctaaaagttccctcctttggtttccatgagattcaccaagcttttccaacaaatgggtcataga 34603204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 220
Target Start/End: Original strand, 37070157 - 37070279
Alignment:
Q  99 tgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaatcttgtca 197  Q
    ||||||| ||| |||||||||| ||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||| ||||   ||||||| |||||    
T  37070157 tgtcacgattttccaaatcgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtca 37070256  T
Q  198 cattttcccaaaatcgtgtcacg 220  Q
    | |||||||||||||||| ||||    
T  37070257 cgttttcccaaaatcgtgacacg 37070279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 31928277 - 31928397
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaa-caaattggtcatagaatgcatatgcagtg-ttcagatccgggcaaaatcg 98  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| |||||| || ||| || |  ||| ||||||| | | ||||||||    
T  31928277 ctaaaagttccctcctttggtttccatgaaattcaccaagcttacccaatcaaatgggtcatggagtgcttaagacgtgtttcagat-ctgtcaaaatcg 31928375  T
Q  99 tgtcacgttttcccaaatcgtg 120  Q
    | ||||||||||| ||||||||    
T  31928376 tatcacgttttccaaaatcgtg 31928397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 220
Target Start/End: Complemental strand, 3206805 - 3206675
Alignment:
Q  93 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggta-caaccaaccttatcctgaaaa-cgggtccagcaagccgaaaa 189  Q
    ||||||||||||||||| ||||||| ||| ||   ||| ||||||| |||||||||| | |||||||||||||| |||| |  | |||||||| ||||||    
T  3206805 aaatcgtgtcacgtttttcccaaattgtgtcacgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaa 3206706  T
Q  190 tcttgtcacattttcccaaaatcgtgtcacg 220  Q
    || |||||| |||||||||||| ||||||||    
T  3206705 tcgtgtcacgttttcccaaaattgtgtcacg 3206675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 3282089 - 3282218
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 189  Q
    ||||||||||||||||||| | |||||||| ||   ||||||||||| ||||||||||  |||||||||||| ||||||||   ||||||||   |||||    
T  3282089 caaaatcgtgtcacgtttttc-aaatcgtggcacgattggtgcgtacgacccaaggtatgaccaaccttatcttgaaaacgtacccagcaagtttgaaaa 3282187  T
Q  190 tcttgtcacattttcccaaaatcgtgtcacg 220  Q
    || |||||| ||||| |||||||||| ||||    
T  3282188 tcgtgtcacgttttctcaaaatcgtgacacg 3282218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 29652195 - 29652273
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 169  Q
    ||||||| ||||||||||  |||||||||||||   |||||| |||| ||||||||||| |||||||||||||||||||    
T  29652195 caaaatcatgtcacgtttgtccaaatcgtgacacgattggtgtgtacgacccaaggtacgaccaaccttatcctgaaaa 29652273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 21536285 - 21536206
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 171  Q
    ||||||||||||||||||||| |||||| | ||   ||||||||||| ||||||||||| |||||||| ||||||||||||    
T  21536285 caaaatcgtgtcacgttttcc-aaatcggggcacgattggtgcgtacgacccaaggtacgaccaacctcatcctgaaaacg 21536206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7482708 - 7482751
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagctta 44  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  7482708 ctaaaagtttcctcctttggtttccatgagattcaccaaactta 7482751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 220
Target Start/End: Complemental strand, 20762490 - 20762361
Alignment:
Q  93 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||| | | | ||||||| ||||||||||||||||||| |  | ||| |||||| |||||    
T  20762490 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgttcgatcaaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 20762391  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | ||||||  ||||||||||||||||||||    
T  20762390 cgtgtcacgatttcccaaaatcgtgtcacg 20762361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 3189131 - 3189040
Alignment:
Q  131 tgcgtacaacccaaggta-caaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||||| |||||||||| | |||||||||||||| |||| |  | |||||||| |||||||| |||||| |||||||||||| ||||||||    
T  3189131 tgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacg 3189040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 3197948 - 3197857
Alignment:
Q  131 tgcgtacaacccaaggta-caaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||||| |||||||||| | |||||||||||||| |||| |  | |||||||| |||||||| |||||| |||||||||||| ||||||||    
T  3197948 tgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacg 3197857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 13604336 - 13604259
Alignment:
Q  92 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 170  Q
    ||||||||| |||||||||| |||||||| ||   ||| | ||||| ||||||||||| ||||||||||||||||||||    
T  13604336 aaaatcgtgccacgttttcc-aaatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 13604259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 41135510 - 41135452
Alignment:
Q  2 taaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtca 60  Q
    ||||| || ||||||||||||||||||||||| ||||||||||  |||||||| |||||    
T  41135510 taaaatttccctcctttggtttccatgagattaaccaagcttattcaacaaatgggtca 41135452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 13316666 - 13316775
Alignment:
Q  91 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 188  Q
    ||||||||||||||||||| ||| | ||||| ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  | |||||||||| |||    
T  13316666 caaaatcgtgtcacgtttttccccactcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 13316765  T
Q  189 atcttgtcac 198  Q
    ||| ||||||    
T  13316766 atcgtgtcac 13316775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 13659694 - 13659778
Alignment:
Q  133 cgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||| ||||| ||||| |||||||||||   |  |||| ||| ||||||||||||||| || ||||||||||||||||||| |||||    
T  13659694 cgtacgacccacggtacgaccaaccttat---gtcaacgtgtcaagcaagccgaaaatcgtgacacattttcccaaaatcgtatcacg 13659778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 42298452 - 42298505
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaat 54  Q
    ||||||||||| ||||||||||   ||| |||||||||||||||||||||||||    
T  42298452 ctaaaagtttcatcctttggttgttatgggattcaccaagcttacccaacaaat 42298505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 47114862 - 47114825
Alignment:
Q  2 taaaagtttcctcctttggtttccatgagattcaccaa 39  Q
    |||||||| |||||||||||||||||||||||||||||    
T  47114862 taaaagttccctcctttggtttccatgagattcaccaa 47114825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 15820124 - 15820048
Alignment:
Q  93 aaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 169  Q
    ||||||||||| | || || |||||| ||||  |||| ||||||| ||||||||||| |||||||||||||| ||||    
T  15820124 aaatcgtgtcatggttgccaaaatcgagacatggttgatgcgtacgacccaaggtacgaccaaccttatcctaaaaa 15820048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 22819852 - 22819940
Alignment:
Q  131 tgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcac 219  Q
    ||||||| ||||||||||| ||||| ||||| ||||||||| ||| | || ||  |||||| ||||||| |||| ||||||| ||||||    
T  22819852 tgcgtacgacccaaggtacgaccaaacttattctgaaaacgtgtcaaacatgcgaaaaatcatgtcacagtttctcaaaatcatgtcac 22819940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 16455464 - 16455385
Alignment:
Q  92 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 171  Q
    |||| ||||||||| ||  |||||||||| ||  |||| ||||||| ||||||||||| | ||| |||||||||||||||    
T  16455464 aaaaacgtgtcacgattggccaaatcgtgtcacggttgatgcgtacgacccaaggtacgagcaaacttatcctgaaaacg 16455385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28242079 - 28242041
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaa 39  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  28242079 ctaaaagttccctcctttggttttcatgagattcaccaa 28242041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 16124328 - 16124295
Alignment:
Q  138 aacccaaggtacaaccaaccttatcctgaaaacg 171  Q
    |||||||||||| |||||||||||||||||||||    
T  16124328 aacccaaggtacgaccaaccttatcctgaaaacg 16124295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 9e-52; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 35447361 - 35447575
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||| || ||| ||   ||||||||||||||| ||||||||||    
T  35447361 ctaaaagttctctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcatggagtgcttacatagtgttcagatccggacaaaatcgtg 35447460  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    ||||| |||||| ||||||||||   ||||||||||| ||||||||||| | |||||||||| |||||||  | ||  ||| |||| |||| ||||||||    
T  35447461 tcacgatttccc-aatcgtgacacgtttggtgcgtacgacccaaggtacgagcaaccttatcttgaaaacttgcccgacaaaccgataatcgtgtcacat 35447559  T
Q  201 tttcccaaaatcgtgt 216  Q
    ||||||||||||||||    
T  35447560 tttcccaaaatcgtgt 35447575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 2837193 - 2837322
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||| ||||||||||||||| |||||   ||||||||||| ||||||||||| ||||||||||||||||||||    ||||||||  ||||||    
T  2837193 caaaatcgtgttacgttttcccaaatcatgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttacccagcaaggtgaaaat 2837292  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| |||||||||||||||||||||    
T  2837293 cgtgtcacgttttcccaaaatcgtgtcacg 2837322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 34389233 - 34389362
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 189  Q
    ||||||||||||||||||||| |||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   |||||    
T  34389233 caaaatcgtgtcacgttttcc-aaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaa 34389331  T
Q  190 tcttgtcacattttcccaaaatcgtgtcacg 220  Q
    || |||||| |||||||||||||||||||||    
T  34389332 tcgtgtcacgttttcccaaaatcgtgtcacg 34389362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 36318358 - 36318488
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||||||||||||||||  ||||| ||||||  |||||||||||| |  |||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  36318358 caaaatcgtgtcacgttttgtcaaattgtgacacggttggtgcgtacgattcaaggtacgaccaaccttatcctgaaaacgtggccagcaagccgaaaat 36318457  T
Q  191 cttgtcacattttccc-aaaatcgtgtcacg 220  Q
    | |||||| ||| ||| ||||||||||||||    
T  36318458 cgtgtcacgtttccccaaaaatcgtgtcacg 36318488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 20522604 - 20522733
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||||  |||||| ||||||   ||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||  ||||||    
T  20522604 caaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaat 20522703  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| ||||| |||||||||| ||||    
T  20522704 cgtgtcacgttttctcaaaatcgtgacacg 20522733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 14698724 - 14698600
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||||  ||||||||||| |  |||||||||||| ||||||||||| ||||||||||||||||||| | | ||| ||||  ||||||    
T  14698724 caaaatcgtgtcacgtttgtccaaatcgtgaaatggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatgtgcccaacaagttgaaaat 14698625  T
Q  191 cttgtcacattttcccaaaatcgtg 215  Q
    | |||||| ||||||||||||||||    
T  14698624 cgtgtcacgttttcccaaaatcgtg 14698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 45726621 - 45726507
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||| || ||| ||   ||||||||||||||  ||||||||||    
T  45726621 ctaaaagttccctcatttggtttccatgagattcaccaagcttacccaacaaatgggtcatggagtgcttacatagtgttcagatccgaacaaaatcgtg 45726522  T
Q  101 tcacgttttcccaaa 115  Q
    |||| ||| ||||||    
T  45726521 tcacatttgcccaaa 45726507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 21630327 - 21630456
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||||  |||||||||||||   |||||| |||| |||||| |||| ||||||||||||||||||||| | ||||||||  ||||||    
T  21630327 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgtgtacgacccaaagtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaat 21630426  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||  |||||||||||| ||| ||||    
T  21630427 cgtgtcatgttttcccaaaattgtgacacg 21630456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 186 - 300
Target Start/End: Original strand, 1632300 - 1632413
Alignment:
Q  186 aaaatcttgtcacattttcccaaaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtc 285  Q
    |||||| |||||| |||||| |||||||||||||||||||||| ||| | ||| ||| |||||  |||||||||||||||||||| || |||| ||||||    
T  1632300 aaaatcgtgtcacgttttcc-aaaatcgtgtcacgttttgccttcagaatcaaacattcattcggcatcagaaatcgtgacacggttgccaaaacgtgtc 1632398  T
Q  286 acgattcttcgcttt 300  Q
    |||||||||| ||||    
T  1632399 acgattcttcacttt 1632413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 33528338 - 33528209
Alignment:
Q  92 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaat 190  Q
    |||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| | ||||||||| |||||||||   ||||||||   ||||||    
T  33528338 aaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgatcaaccttattctgaaaacgtacccagcaagtttgaaaat 33528239  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | |||||| |||||||||||||||| ||||    
T  33528238 cgtgtcacgttttcccaaaatcgtgacacg 33528209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 10706967 - 10706843
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 189  Q
    ||||||||||||||||||||| ||| |||| ||   |||||| |||| ||||||||||| |||||||||||||| ||||||  |||||||||   |||||    
T  10706967 caaaatcgtgtcacgttttcc-aaaccgtggcacgattggtgtgtacgacccaaggtacgaccaaccttatccttaaaacgtatccagcaagtttgaaaa 10706869  T
Q  190 tcttgtcacattttcccaaaatcgtg 215  Q
    || |||||| ||||||||||||||||    
T  10706868 tcgtgtcacgttttcccaaaatcgtg 10706843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 17865595 - 17865684
Alignment:
Q  127 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaatcttgtcacattttcccaaaatcgtg 215  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   ||||||| |||||||||||||||||||||||    
T  17865595 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacattttcccaaaatcgtg 17865684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1632209 - 1632269
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  1632209 ctaaaagttccctcctttggtttccatgagattcaccaagcttacacaacaaataggtcat 1632269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 36988423 - 36988554
Alignment:
Q  91 caaaatcgtgtcacgttttccca-aatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaagccgaaa 188  Q
    |||||||||||||| ||||||   ||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||| |||||  | |||||||| |||||    
T  36988423 caaaatcgtgtcacattttccatcaatcgtgtcacaattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaa 36988522  T
Q  189 atcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||| |||||| ||||||||||||| |||||||    
T  36988523 atcgtgtcacgttttcccaaaatcatgtcacg 36988554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 42262087 - 42262190
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||| | ||||||||||||  ||||||||||||||||||| | |||||||| ||||| || |||| |||  |||||||||||||  |||||||||||    
T  42262087 ctaaaagctccctcctttggttctcatgagattcaccaagcttgctcaacaaatgggtcaaaggatgcttatatagtgttcagatccaagcaaaatcgtg 42262186  T
Q  101 tcac 104  Q
    ||||    
T  42262187 tcac 42262190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 45099575 - 45099444
Alignment:
Q  91 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 188  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||| |  |||||||| ||||||||||||||||||| |  | |||||||||| |||    
T  45099575 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgattcaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 45099476  T
Q  189 atcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||| ||||||| ||||||||||| ||||||||    
T  45099475 atcgtgtcacaatttcccaaaattgtgtcacg 45099444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 39483258 - 39483388
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 189  Q
    |||||| ||| |||||||  |||||||||||||   ||||||||||  ||||||||||| |||||||||||||||||||||   ||| ||||   |||||    
T  39483258 caaaattgtgccacgtttgtccaaatcgtgacacgattggtgcgtaagacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaa 39483357  T
Q  190 tcttgtcacattttcccaaaatcgtgtcacg 220  Q
    || |||||| |||||||||||||||| ||||    
T  39483358 tcgtgtcacgttttcccaaaatcgtgacacg 39483388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 23078186 - 23078062
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 189  Q
    |||||| |||||||||||||| |||||||| ||   ||||||||||| ||||||| ||| |||||||||||||||||||||   ||| ||||   |||||    
T  23078186 caaaattgtgtcacgttttcc-aaatcgtggcacgattggtgcgtacgacccaagatacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaa 23078088  T
Q  190 tcttgtcacattttcccaaaatcgtg 215  Q
    || |||||| ||||||||||||||||    
T  23078087 tcgtgtcacgttttcccaaaatcgtg 23078062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 33118517 - 33118646
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||||| ||||  |||||||||||||   ||||||||||| |||||||||||  ||||||||||| |||||| | | ||||||||  ||||||    
T  33118517 caaaatcgtgtcatgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacggccaaccttatcttgaaaatgtgcccagcaagttgaaaat 33118616  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
      |||||| |||||| |||| |||| ||||    
T  33118617 tgtgtcacgttttcctaaaaacgtgacacg 33118646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7450992 - 7450940
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaa 53  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  7450992 ctaaaagttccctccttttgtttccatgagattcaccaagcttacccaacaaa 7450940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 5723604 - 5723711
Alignment:
Q  93 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||| |  |||||||||||| |||||    
T  5723604 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgtccagcaagccaaaaat 5723703  T
Q  191 cttgtcac 198  Q
    | ||||||    
T  5723704 cgtgtcac 5723711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 8389864 - 8389733
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaag-ccgaaa 188  Q
    ||||||||||||| ||||| ||||||| |||||   ||||||||||| |||||||||||  |||||||||||||| ||||||    |||||||   ||||    
T  8389864 caaaatcgtgtcatgtttttccaaatcatgacatgattggtgcgtacgacccaaggtacgtccaaccttatcctgaaaaacgtactcagcaagtttgaaa 8389765  T
Q  189 atcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||| |||||| |||||||||||||||| ||||    
T  8389764 atcgtgtcacgttttcccaaaatcgtgacacg 8389733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 39284661 - 39284587
Alignment:
Q  146 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    |||| ||||||||||||||||||||    ||||||||||||||||  |||||| |||||||||||||||||||||    
T  39284661 gtacgaccaaccttatcctgaaaactttcccagcaagccgaaaattgtgtcacgttttcccaaaatcgtgtcacg 39284587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 2334767 - 2334874
Alignment:
Q  93 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||| ||||||||||| ||   ||| || |||| ||||||||||| ||||||||||||||||||| |  | |||||||||| |||||    
T  2334767 aaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgtgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaat 2334866  T
Q  191 cttgtcac 198  Q
    | ||||||    
T  2334867 cgtgtcac 2334874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 29867644 - 29867569
Alignment:
Q  146 gtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||||||||||||||| |||||| |  | |||||||| |||||||| |||||| |||||||||||||||||||||    
T  29867644 gtacaaccaaccttatcttgaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 29867569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 36206013 - 36206092
Alignment:
Q  91 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 169  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||||| ||||||||| |||||||||||||||||||    
T  36206013 caaaatcgtgtcacgtttttccccaatcgtgccacaattgatgcgtacaatccaaggtacgaccaaccttatcctgaaaa 36206092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 28258891 - 28258814
Alignment:
Q  92 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 170  Q
    ||||||||| |||||||||| |||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||||    
T  28258891 aaaatcgtgccacgttttcc-aaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaac 28258814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 4503480 - 4503589
Alignment:
Q  91 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 188  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  | |||||||||| |||    
T  4503480 caaaatcgtgtcacgtttttccccaatcgtgccacaattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 4503579  T
Q  189 atcttgtcac 198  Q
    ||| ||||||    
T  4503580 atcgtgtcac 4503589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 24397740 - 24397651
Alignment:
Q  16 tttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacg 105  Q
    ||||||||||||||||||||||||||||  |||||||||  | || || |||| |||  ||||||||||||| | ||||| |||||||||    
T  24397740 tttggtttccatgagattcaccaagcttttccaacaaatgagccaaaggatgcttatatagtgttcagatccagacaaaaccgtgtcacg 24397651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17450282 - 17450222
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcat 61  Q
    ||||||||| |||||||||||||||||||||||| | ||| || |||||||||| ||||||    
T  17450282 ctaaaagttccctcctttggtttccatgagattctctaagtttgcccaacaaatgggtcat 17450222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 17629082 - 17629022
Alignment:
Q  208 aaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacac 268  Q
    ||||||||||||| ||||||||||||| ||||| | |||||  | ||||||||||||||||    
T  17629082 aaatcgtgtcacgatttgcctccaggatcaaccttacattctgcctcagaaatcgtgacac 17629022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 6595406 - 6595473
Alignment:
Q  154 aaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    |||||||||||||||| |  | |||||||||| |||||| |||||| |||||||||||| ||||||||    
T  6595406 aaccttatcctgaaaatctagcccagcaagccaaaaatcgtgtcacgttttcccaaaattgtgtcacg 6595473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 13569712 - 13569789
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 169  Q
    |||||||||||||  |||| |||||||||||||   ||||||| ||| | ||||||||| | |||||||||||||||||    
T  13569712 caaaatcgtgtcaaatttttccaaatcgtgacacgattggtgcttacgatccaaggtacga-caaccttatcctgaaaa 13569789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33647859 - 33647817
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagctt 43  Q
    |||||||||  |||||||||||||||||| |||||||||||||    
T  33647859 ctaaaagttctctcctttggtttccatgaaattcaccaagctt 33647817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 120
Target Start/End: Complemental strand, 7450906 - 7450877
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtg 120  Q
    ||||||||||||||||||||||||||||||    
T  7450906 caaaatcgtgtcacgttttcccaaatcgtg 7450877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 45
Target Start/End: Complemental strand, 44750273 - 44750240
Alignment:
Q  12 ctcctttggtttccatgagattcaccaagcttac 45  Q
    ||||||||||||| ||||||||||||||||||||    
T  44750273 ctcctttggtttctatgagattcaccaagcttac 44750240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 45726460 - 45726415
Alignment:
Q  257 aaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 302  Q
    |||||||||||||| || |||||||||||||| |||||| ||||||    
T  45726460 aaatcgtgacacggttgccaaatcgtgtcacgtttcttcactttct 45726415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 123
Target Start/End: Complemental strand, 39284704 - 39284672
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgaca 123  Q
    ||||||| |||||||||||||||||||||||||    
T  39284704 caaaatcatgtcacgttttcccaaatcgtgaca 39284672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 27015223 - 27015026
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattgg-tcatagaatgcatatgcagtgttcagatccgggcaaaatcgt 99  Q
    ||||||||| ||||||||| ||||||| |||||| |||||| |||||| ||||| || |||||||||||||||   |||||||||||||| |||||||||    
T  27015223 ctaaaagttccctcctttgatttccattagattcgccaagcataccca-caaatggggtcatagaatgcatatattgtgttcagatccggacaaaatcgt 27015125  T
Q  100 gtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcac 198  Q
    |||||| |||||||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | ||| ||||| ||||||| ||||||    
T  27015124 gtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatgcccaacaagctgaaaatcgtgtcac 27015026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 38746696 - 38746535
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||   |||||||||||||  ||||||||||    
T  38746696 ctaaaagttctctcctttggtttccatgagattcaccaagcttacccaacaaatgagtcaaagaatgcatatattgtgttcagatccgaacaaaatcgtg 38746597  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatc 162  Q
    ||| | |||||||||| ||||||   ||||||||||| ||||||||||| ||||||||||||    
T  38746596 tcatgatttcccaaattgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatc 38746535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 5057739 - 5057521
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    |||||||||  |||||||||||||||||||||||||| ||||     ||||||| |||||| || ||| ||   ||||||||||||||| ||||||||||    
T  5057739 ctaaaagttctctcctttggtttccatgagattcacccagctcttt-aacaaatgggtcatggagtgcttacatagtgttcagatccggacaaaatcgtg 5057641  T
Q  101 tcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacat 200  Q
    |||||||||||||||| ||||||  |||| ||||||| ||| ||||||| ||||||||||||||||||||  |  || |||| |||||||  |||||| |    
T  5057640 tcacgttttcccaaattgtgacacggttgatgcgtacgaccaaaggtacgaccaaccttatcctgaaaacttgctcaacaagtcgaaaattgtgtcacgt 5057541  T
Q  201 tttcccaaaatcgtgtcacg 220  Q
    ||| ||||||||||||||||    
T  5057540 tttaccaaaatcgtgtcacg 5057521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 42426584 - 42426713
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||| ||||||||||||||||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||| ||||||||    
T  42426584 caaaattgtgtcacgttttcccaaatcgtgacatgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaaaccgaaaat 42426683  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
      |||||| |||||||||||||||||||||    
T  42426684 tgtgtcacgttttcccaaaatcgtgtcacg 42426713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 13488022 - 13487895
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||| ||||||||||||||||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||||||||||||    
T  13488022 caaaattgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaat 13487923  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    |  ||    |||||||||||||||||||||    
T  13487922 c--gtgctgttttcccaaaatcgtgtcacg 13487895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 32636643 - 32636513
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaagccgaaaa 189  Q
    ||||||| |||||||||||||||||||||||||   ||||||||||  ||||||||||| ||||||||||||||| |||||  | |||||||| ||||||    
T  32636643 caaaatcatgtcacgttttcccaaatcgtgacacgtttggtgcgtaagacccaaggtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaaa 32636544  T
Q  190 tcttgtcacattttcccaaaatcgtgtcacg 220  Q
    || || ||| |||||||||||||||||||||    
T  32636543 tcgtgccacgttttcccaaaatcgtgtcacg 32636513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 19806225 - 19806118
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||| ||||||||||| |||||||||||||| |||||| | | ||||||||||||||    
T  19806225 caaaatcgtgtcacgttttcccaagtcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctaaaaacgtgcctagcaagccgaaaat 19806126  T
Q  191 cttgtcac 198  Q
    | ||||||    
T  19806125 cgtgtcac 19806118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 16650971 - 16651098
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    |||||||||||||| |||| |||||||||||||  |||||||||||| | ||||||||| |||||||||||||||||||||   ||| ||||    ||||    
T  16650971 caaaatcgtgtcacattttgccaaatcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcctgaaaacgtacccaacaagttataaat 16651070  T
Q  191 cttgtcacattttcccaaaatcgtgtca 218  Q
    | |||||| |||||||||||||||||||    
T  16651071 cgtgtcacgttttcccaaaatcgtgtca 16651098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 40146952 - 40146843
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgc--atatgcagtgttcagatccgggcaaaatcg 98  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||| || |||  | ||  ||||||||||||| | ||||||||    
T  40146952 ctaaaagtttcatcctttggtttccatgagattcaccaagcttaaccaacaaatgggtcatggagtgcttacatatagtgttcagatccagacaaaatcg 40146853  T
Q  99 tgtcacgttt 108  Q
    || |||||||    
T  40146852 tgacacgttt 40146843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 11916687 - 11916557
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 189  Q
    |||||||||||||||||||| |||||||||| |   ||||||||||| ||||||||||| |||||||| |||||||||||    ||| ||||   |||||    
T  11916687 caaaatcgtgtcacgttttctcaaatcgtgatacgattggtgcgtacgacccaaggtacgaccaacctgatcctgaaaacatacccaacaagtttgaaaa 11916588  T
Q  190 tcttgtcacattttcccaaaatcgtgtcacg 220  Q
    || |||||| |||||||||||||||| ||||    
T  11916587 tcgtgtcacgttttcccaaaatcgtgacacg 11916557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 198
Target Start/End: Complemental strand, 535700 - 535615
Alignment:
Q  113 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcac 198  Q
    |||||||||||   ||||||| ||| ||||||||||| ||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  535700 aaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcac 535615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 198
Target Start/End: Original strand, 39468917 - 39468988
Alignment:
Q  127 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcac 198  Q
    ||||||| ||| ||||||||||| |||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  39468917 ttggtgcatacgacccaaggtacgaccaaccttatcctaaaaacgtgtccagcaagccgaaaatcgtgtcac 39468988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 13239572 - 13239442
Alignment:
Q  91 caaaatcgtgtcacgttttccca-aatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaa 189  Q
    |||||| ||||||||||||||   ||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||||  |||||||||| | || |    
T  13239572 caaaattgtgtcacgttttccatcaatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagtcaaaga 13239473  T
Q  190 tcttgtcacattttcccaaaatcgtgtcacg 220  Q
    || |||||| ||| ||||||||| |||||||    
T  13239472 tcgtgtcacgtttacccaaaatcttgtcacg 13239442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 91 - 212
Target Start/End: Original strand, 14520612 - 14520733
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 189  Q
    ||||||||||||||||||||| |||||||||||   ||  ||||||| ||||||||||| |||||||||||||||||||||   ||| ||||   |||||    
T  14520612 caaaatcgtgtcacgttttcc-aaatcgtgacacgattaatgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaa 14520710  T
Q  190 tcttgtcacattttcccaaaatc 212  Q
    || |||||| |||||||||||||    
T  14520711 tcgtgtcacgttttcccaaaatc 14520733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 16642365 - 16642414
Alignment:
Q  12 ctcctttggtttccatgagattcaccaagcttacccaacaaattggtcat 61  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16642365 ctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcat 16642414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 31004868 - 31004739
Alignment:
Q  92 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcct-gaaaacgggtccagcaagccgaaaat 190  Q
    |||| ||||||||||||  |||||||||||||   ||||||||||| |||||| |||||||||||||||||||  |||||| | ||||||||  ||| ||    
T  31004868 aaaaacgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaagtacaaccaaccttatcctaaaaaacgtgcccagcaagttgaatat 31004769  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    | | |||| |||||||| ||||||| ||||    
T  31004768 cgtatcacgttttcccacaatcgtgacacg 31004739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 139 - 220
Target Start/End: Complemental strand, 40146820 - 40146739
Alignment:
Q  139 acccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||||||||| |||||| || ||||||||||| | ||| ||||| |||||||  |||||||||||||||||||||||||||    
T  40146820 acccaaggtacgaccaactttttcctgaaaacgtgaccaacaagctgaaaatcgagtcacattttcccaaaatcgtgtcacg 40146739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 213159 - 213099
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcat 61  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||| |||| ||||||    
T  213159 ctaaaagttccctcctttggtttccatgagattcatcaagcttacccaaaaaatgggtcat 213099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 12083892 - 12083813
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 171  Q
    |||||| |||||||||||||| |||||||||||   ||||||| ||| ||||||||||| |||||||||||||||||||||    
T  12083892 caaaattgtgtcacgttttcc-aaatcgtgacacgattggtgcatacgacccaaggtacgaccaaccttatcctgaaaacg 12083813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 42428822 - 42428896
Alignment:
Q  146 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    |||| |||||||||||||| |||||  | |||||||||| |||||| |||||| |||||||||||||||||||||    
T  42428822 gtacgaccaaccttatcctaaaaacttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacg 42428896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 38746529 - 38746460
Alignment:
Q  151 accaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||||| |||| ||||||  ||||||||    
T  38746529 accaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgtttttccaaaaatgtgtcacg 38746460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 16649972 - 16650044
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcc 163  Q
    ||||||| |||||| |||| |||||||||||||  |||||||||||| | ||||||||| |||||||||||||    
T  16649972 caaaatcatgtcacattttgccaaatcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcc 16650044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 30792931 - 30792872
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtca 60  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  30792931 ctaaaagtttactcatttggtttccatgagattcaccaagcttacttaacaaatgggtca 30792872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 30683312 - 30683386
Alignment:
Q  146 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    |||| ||||||||||||||||||||  | | |||||| |||||||| |||||| |||||||||||| ||||||||    
T  30683312 gtacgaccaaccttatcctgaaaacttgcctagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacg 30683386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 37438925 - 37438835
Alignment:
Q  131 tgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||||| ||||||||||| || |||||||||||||||| |  | ||| |||||| |||||| |||||| ||||||||||||| |||||||    
T  37438925 tgcgtacgacccaaggtacgacaaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgttttcccaaaatcatgtcacg 37438835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14689885 - 14689938
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaat 54  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||| ||||||||    
T  14689885 ctaaaagttttctcctttagtttccatgagattcaccaagcctactcaacaaat 14689938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30802632 - 30802579
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaat 54  Q
    ||||||||| |||| |||||||||||||||||||||||||| ||| ||||||||    
T  30802632 ctaaaagttccctcatttggtttccatgagattcaccaagcgtactcaacaaat 30802579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 25412580 - 25412473
Alignment:
Q  93 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 190  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  | |||||||||| |||||    
T  25412580 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaat 25412481  T
Q  191 cttgtcac 198  Q
    | ||||||    
T  25412480 cgtgtcac 25412473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 27638092 - 27638131
Alignment:
Q  2 taaaagtttcctcctttggtttccatgagattcaccaagc 41  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  27638092 taaaagttccctcctttggtttccatgagattcaccaagc 27638131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28278006 - 28277963
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagctta 44  Q
    |||||||||||||||||| |||||| ||||||||||||||||||    
T  28278006 ctaaaagtttcctcctttagtttccttgagattcaccaagctta 28277963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 533588 - 533542
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtac 137  Q
    |||||||||||||||||||||||||||||||||   |||||||||||    
T  533588 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtac 533542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 13342881 - 13342772
Alignment:
Q  91 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 188  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||| | | ||||||| ||||||||||||||||||| |  | |||||||||| |||    
T  13342881 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatctaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 13342782  T
Q  189 atcttgtcac 198  Q
    ||| ||||||    
T  13342781 atcgtgtcac 13342772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 30182409 - 30182329
Alignment:
Q  91 caaaatcgtgtcacgtttt--cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 169  Q
    |||||||||||||||||||  ||| ||||||| ||   ||| ||||||| | ||||||||| |||||||||||||||||||    
T  30182409 caaaatcgtgtcacgtttttcccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 30182329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 9353048 - 9352971
Alignment:
Q  92 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 170  Q
    ||||||||| |||||||||| |||||||| ||   ||| |  |||| ||||||||||| ||||||||||||||||||||    
T  9353048 aaaatcgtgccacgttttcc-aaatcgtgccacgattgatatgtacgacccaaggtacgaccaaccttatcctgaaaac 9352971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 35615862 - 35615808
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaatt 55  Q
    ||||||||||  || ||||||||| | |||||||||||||||||| |||||||||    
T  35615862 ctaaaagttttttcatttggtttcaaggagattcaccaagcttacgcaacaaatt 35615808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 36932023 - 36931986
Alignment:
Q  133 cgtacaacccaaggtacaaccaaccttatcctgaaaac 170  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  36932023 cgtacgacccaaggtacgaccaaccttatcctgaaaac 36931986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 20764 - 20891
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 190  Q
    ||||||||||| ||||||| |||||||||||||   || |||||||| ||||||||||| ||||||||||| || |||||    ||| ||||||||||||    
T  20764 caaaatcgtgttacgttttgccaaatcgtgacacgtttagtgcgtacgacccaaggtacgaccaaccttattctaaaaactttcccaacaagccgaaaat 20863  T
Q  191 cttgtcacattttcccaaaatcgtgtca 218  Q
    | |||||| |||||||||||||||||||    
T  20864 cgtgtcacgttttcccaaaatcgtgtca 20891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 59; Significance: 6e-25; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 91 - 212
Target Start/End: Original strand, 6067 - 6189
Alignment:
Q  91 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 189  Q
    ||||||||||||||||||  |||||| ||||||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   |||||    
T  6067 caaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaa 6166  T
Q  190 tcttgtcacattttcccaaaatc 212  Q
    || ||||||||||||||||||||    
T  6167 tcgtgtcacattttcccaaaatc 6189  T

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Target: scaffold0006; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 2876 - 3005
Alignment:
Q  92 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaat 190  Q
    |||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||    ||||||||   ||||||    
T  2876 aaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatacccagcaagtttgaaaat 2975  T
Q  191 cttgtcacattttcccaaaatcgtgtcacg 220  Q
    |  ||||| |||||||||||||||| ||||    
T  2976 cgggtcacgttttcccaaaatcgtgacacg 3005  T

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Target: scaffold0006; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 132993 - 132916
Alignment:
Q  92 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 170  Q
    ||||||||| |||||||||| |||||||| ||   ||| | ||||| ||||||||||| ||||||||||||||||||||    
T  132993 aaaatcgtgccacgttttcc-aaatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 132916  T

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Target: scaffold0006; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 149455 - 149539
Alignment:
Q  133 cgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    ||||| ||||| ||||| |||||||||||   |  |||| ||| ||||||||||||||| || ||||||||||||||||||| |||||    
T  149455 cgtacgacccacggtacgaccaaccttat---gtcaacgtgtcaagcaagccgaaaatcgtgacacattttcccaaaatcgtatcacg 149539  T

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Target: scaffold0176 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 220
Target Start/End: Original strand, 17635 - 17742
Alignment:
Q  113 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatc 212  Q
    |||||||||||   ||||||||||| || || ||||| |||||||||||| ||||| |  | |||||||||| |||||| |||||| |||||||||||||    
T  17635 aaatcgtgacacgtttggtgcgtacgactcagggtacgaccaaccttatcatgaaagcttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatc 17734  T
Q  213 gtgtcacg 220  Q
    ||||||||    
T  17735 gtgtcacg 17742  T

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Target: scaffold0176; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 18481 - 18530
Alignment:
Q  5 aagtttcctcctttggtttccatgagattcaccaagcttacccaacaaat 54  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  18481 aagttttctcctttggtttccatgagattcacccagcttacccaacaaat 18530  T

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Target: scaffold0002 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 490922 - 491025
Alignment:
Q  1 ctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtg 100  Q
    ||||||| | ||||||||||||  ||||||||||||||||||| | |||||||| ||||| || |||| |||  |||||||||||||  |||||||||||    
T  490922 ctaaaagctccctcctttggttctcatgagattcaccaagcttgctcaacaaatgggtcaaaggatgcttatatagtgttcagatccaagcaaaatcgtg 491021  T
Q  101 tcac 104  Q
    ||||    
T  491022 tcac 491025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 434353 - 434221
Alignment:
Q  91 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagcc-gaa 187  Q
    |||||||||| |||||||| ||| ||||||| ||   ||  ||||||| | ||||||||| ||||||||||||||||||| |  | ||||||||||  ||    
T  434353 caaaatcgtgccacgtttttccccaatcgtgccacgatttatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 434254  T
Q  188 aatcttgtcacattttcccaaaatcgtgtcacg 220  Q
    |||| ||||||  ||||||||||||||||||||    
T  434253 aatcgtgtcacgatttcccaaaatcgtgtcacg 434221  T

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Target: scaffold0087 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 92 - 225
Target Start/End: Complemental strand, 36546 - 36413
Alignment:
Q  92 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaat 190  Q
    ||||||||| |||||||||| |||||||| ||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   ||||||    
T  36546 aaaatcgtgccacgttttcc-aaatcgtgccatgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaat 36448  T
Q  191 cttgtcacattttcccaaaatcgtgtcacgttttg 225  Q
      |||||| ||||| |||||||||| |||| ||||    
T  36447 tgtgtcacgttttcacaaaatcgtgccacgatttg 36413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 43675 - 43598
Alignment:
Q  92 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 170  Q
    ||||||||| |||||||||| |||||||| ||   ||| | | ||| ||||||||||| ||||||||||||||||||||    
T  43675 aaaatcgtgccacgttttcc-aaatcgtgccacgattgatacatacgacccaaggtacgaccaaccttatcctgaaaac 43598  T

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Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 114365 - 114278
Alignment:
Q  131 tgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtca 218  Q
    ||||||| ||||||||||| |||||||||||||||||||    | |||||||||| |||||| |||||| ||||||||| |||||||||    
T  114365 tgcgtacgacccaaggtaccaccaaccttatcctgaaaattttgcccagcaagcc-aaaatcgtgtcacgttttcccaatatcgtgtca 114278  T

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Target: scaffold0098 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 45582 - 45659
Alignment:
Q  92 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 170  Q
    ||||||||| |||||||||| |||||||| ||   ||| |  |||| ||||||||||| ||||||||||||||||||||    
T  45582 aaaatcgtgccacgttttcc-aaatcgtgtcacgattgatatgtacgacccaaggtacgaccaaccttatcctgaaaac 45659  T

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Target: scaffold0140 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 8091 - 8054
Alignment:
Q  133 cgtacaacccaaggtacaaccaaccttatcctgaaaac 170  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  8091 cgtacgacccaaggtacgaccaaccttatcctgaaaac 8054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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