View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6392_low_56 (Length: 323)

Name: NF6392_low_56
Description: NF6392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6392_low_56
NF6392_low_56
[»] chr4 (6 HSPs)
chr4 (1-316)||(25568595-25568917)
chr4 (8-86)||(4135099-4135176)
chr4 (5-94)||(4322411-4322499)
chr4 (8-94)||(4125749-4125834)
chr4 (226-296)||(4319534-4319604)
chr4 (8-45)||(4334160-4334197)
[»] chr6 (22 HSPs)
chr6 (1-94)||(5691420-5691512)
chr6 (4-86)||(5395647-5395728)
chr6 (1-94)||(5148268-5148360)
chr6 (4-94)||(5104181-5104270)
chr6 (8-94)||(5369068-5369153)
chr6 (3-94)||(5261455-5261545)
chr6 (8-94)||(5094649-5094734)
chr6 (192-294)||(5353097-5353199)
chr6 (1-94)||(5285454-5285546)
chr6 (8-94)||(5424361-5424446)
chr6 (4-57)||(5445681-5445734)
chr6 (8-91)||(5075043-5075125)
chr6 (8-94)||(5068383-5068468)
chr6 (226-296)||(5101050-5101120)
chr6 (226-296)||(5136151-5136221)
chr6 (8-94)||(5158810-5158895)
chr6 (4-86)||(5183269-5183350)
chr6 (4-45)||(5342298-5342339)
chr6 (244-293)||(5351411-5351460)
chr6 (1-86)||(5355933-5356017)
chr6 (244-296)||(2938920-2938972)
chr6 (244-296)||(5156245-5156297)
[»] chr2 (1 HSPs)
chr2 (3-94)||(22585630-22585720)
[»] chr7 (1 HSPs)
chr7 (4-94)||(36215201-36215290)
[»] chr5 (1 HSPs)
chr5 (8-89)||(8876411-8876491)
[»] chr3 (4 HSPs)
chr3 (192-296)||(47985625-47985729)
chr3 (192-296)||(47994912-47995016)
chr3 (192-296)||(48004199-48004303)
chr3 (192-296)||(48013484-48013588)


Alignment Details
Target: chr4 (Bit Score: 265; Significance: 1e-148; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 25568595 - 25568917
Alignment:
Q  1 ttatgcagaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgagaatgatt 100  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  25568595 ttatgcagaaattggaataaacgtccttgttgagcgaagccttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgagaatgatg 25568694  T
Q  101 at-------tattattataatgttaaataaaaattgagcctgttttcacaattacagattatgaataacgatggccattatggtgctttcctacgccatg 193  Q
    |        |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25568695 aaaaaattatattattatattgttaaataaaaattgagtctgttttcacaattacagattatgaataacgatggccattatggtgctttcctacgccatg 25568794  T
Q  194 ataattatccaaattggttgaccttctacagtgaaggttcttcaataatttttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgcat 293  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25568795 ataattatccaaattggttgaccttgtacagtgaaggttcttcagtaatttttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgcat 25568894  T
Q  294 tgttgattcttggacctatgcta 316  Q
    |||||||||||||||||||||||    
T  25568895 tgttgattcttggacctatgcta 25568917  T

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Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 4135176 - 4135099
Alignment:
Q  8 gaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttg 86  Q
    ||||| ||||||| ||||||||||||||||||| |||| |||||||||| ||   ||||  ||||||||||||||||||    
T  4135176 gaaatcggaataagtgtccttgttgagcgaagccttgtaactattgatg-ataaaaacaagcttggaatgcatgatttg 4135099  T

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Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 4322499 - 4322411
Alignment:
Q  5 gcagaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga 94  Q
    |||||||||||||||| ||||||||||||| ||||| |||| ||  |||||| ||  |||||  ||||| |||||||||||| |||||||    
T  4322499 gcagaaattggaataagtgtccttgttgagagaagccttgtaacggttgatg-ataagaacaagcttggcatgcatgatttgctgcgaga 4322411  T

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Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 4125834 - 4125749
Alignment:
Q  8 gaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga 94  Q
    ||||||||||||| |||||||||||| |||||| |||| ||  |||||| ||  |||||  ||||| |||||||||||| |||||||    
T  4125834 gaaattggaataagtgtccttgttgaacgaagccttgtaacagttgatg-ataagaacaagcttggcatgcatgatttgctgcgaga 4125749  T

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Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 4319604 - 4319534
Alignment:
Q  226 gaaggttcttcaataatttttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgcattgt 296  Q
    |||||||||||  ||||||||||||| |||| ||||||||| |||  |||||| ||||| || ||||||||    
T  4319604 gaaggttcttctgtaatttttgaagtccctcaagtggaaggacgtagcttgaagacaataatgtgcattgt 4319534  T

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Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 4334160 - 4334197
Alignment:
Q  8 gaaattggaataaatgtccttgttgagcgaagctttgt 45  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  4334160 gaaattggaataagtgtccttgttgagcgaagccttgt 4334197  T

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Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 5691512 - 5691420
Alignment:
Q  1 ttatgcagaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga 94  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||||| |||||| || ||||||| ||| ||||||||||||||||||||||    
T  5691512 ttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatg-ataggaacaggcttagaatgcatgatttgttgcgaga 5691420  T

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Target: chr6; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 5395647 - 5395728
Alignment:
Q  4 tgcagaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttg 86  Q
    ||||||||||||| ||| ||||||||||||||||||| |||| ||| |||||| || |||||||||||| |||||||||||||    
T  5395647 tgcagaaattggagtaagtgtccttgttgagcgaagccttgtaactgttgatg-ataggaacagacttgcaatgcatgatttg 5395728  T

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Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 5148360 - 5148268
Alignment:
Q  1 ttatgcagaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga 94  Q
    |||||||||||||||||||||||||||  | ||||||||| |||||||| |||||| ||  |||  | ||||||||||||||||||||||||||    
T  5148360 ttatgcagaaattggaataaatgtcctactggagcgaagccttgtgactgttgatg-atatgaatcggcttggaatgcatgatttgttgcgaga 5148268  T

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Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 5104270 - 5104181
Alignment:
Q  4 tgcagaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga 94  Q
    ||||||||||||||||| | ||||||||||||||||  || | ||| ||||||| |  ||||| |||||||||||||||||||||||||||    
T  5104270 tgcagaaattggaataagtatccttgttgagcgaagtcttataactgttgatga-taagaacaaacttggaatgcatgatttgttgcgaga 5104181  T

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Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 5369068 - 5369153
Alignment:
Q  8 gaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga 94  Q
    ||||||||||||| | ||||||||||||||||  |||| ||| ||||||| |  ||||| |||||||||||||||||||||||||||    
T  5369068 gaaattggaataagtatccttgttgagcgaagtcttgtcactgttgatga-taagaacaaacttggaatgcatgatttgttgcgaga 5369153  T

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Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 5261545 - 5261455
Alignment:
Q  3 atgcagaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga 94  Q
    ||||||||||||||||||  |||||||||||| ||||| |||||| | |||||| ||  |||||  ||||||||||||| ||||||||||||    
T  5261545 atgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatg-ataagaacatgcttggaatgcatggtttgttgcgaga 5261455  T

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Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 5094649 - 5094734
Alignment:
Q  8 gaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga 94  Q
    ||||||||||||| | ||||||||||||| ||  |||| ||| ||||||| |  ||||| |||||||||||||||||||||||||||    
T  5094649 gaaattggaataagtatccttgttgagcgtagtcttgtaactgttgatga-taagaacaaacttggaatgcatgatttgttgcgaga 5094734  T

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Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 294
Target Start/End: Complemental strand, 5353199 - 5353097
Alignment:
Q  192 tgataattatccaaattggttgaccttctacagtgaaggttcttcaataatttttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgc 291  Q
    ||||| ||||||||||||||| |||||||||  ||||||||||||  ||| |||| | || ||||  ||||||||||||  |||||| |||||||| |||    
T  5353199 tgatagttatccaaattggttaaccttctactctgaaggttcttctgtaacttttcatgtccctctggtggaagggcgtaacttgaagacaatgatgtgc 5353100  T
Q  292 att 294  Q
    |||    
T  5353099 att 5353097  T

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Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 5285546 - 5285454
Alignment:
Q  1 ttatgcagaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga 94  Q
    ||||||||||||||||||||  |||||||||||| ||||| |||||| | |||||| ||  |||||  ||||||||||||| |||| |||||||    
T  5285546 ttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatg-ataagaacatgcttggaatgcatggtttgctgcgaga 5285454  T

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Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 5424361 - 5424446
Alignment:
Q  8 gaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga 94  Q
    ||||||||||||| | ||||||||||||| ||  |||| ||| ||||||| |   |||| |||||||||||||||||||||||||||    
T  5424361 gaaattggaataagtatccttgttgagcggagtcttgtcactgttgatga-taataacaaacttggaatgcatgatttgttgcgaga 5424446  T

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Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 5445681 - 5445734
Alignment:
Q  4 tgcagaaattggaataaatgtccttgttgagcgaagctttgtgactattgatga 57  Q
    ||||||||||||||||| |||||||||||  |||||| |||||||| |||||||    
T  5445681 tgcagaaattggaataagtgtccttgttgctcgaagccttgtgactgttgatga 5445734  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 5075125 - 5075043
Alignment:
Q  8 gaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcg 91  Q
    ||||||||| ||| ||| ||||||||||||||| |||| ||| | |||| || ||||||  |||||||||||||||||| ||||    
T  5075125 gaaattggagtaagtgtacttgttgagcgaagccttgtaactgtcgatg-ataggaacaagcttggaatgcatgatttgctgcg 5075043  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 5068468 - 5068383
Alignment:
Q  8 gaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga 94  Q
    ||||||||||||| | ||||||||||||||||  | || | | ||||| ||  | |||| |||||||||||||||||||||||||||    
T  5068468 gaaattggaataagtatccttgttgagcgaagtctggttattgttgataaaaag-aacaaacttggaatgcatgatttgttgcgaga 5068383  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 5101120 - 5101050
Alignment:
Q  226 gaaggttcttcaataatttttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgcattgt 296  Q
    |||||||||||  ||| ||| ||||| |||| |||||||||||||  |||||| |||||||| ||||||||    
T  5101120 gaaggttcttctgtaactttagaagtccctcaagtggaagggcgtaacttgaagacaatgatgtgcattgt 5101050  T

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Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 5136221 - 5136151
Alignment:
Q  226 gaaggttcttcaataatttttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgcattgt 296  Q
    |||||||||||  ||| ||| ||||| |||| |||||||||||||  |||||| |||||||| ||||||||    
T  5136221 gaaggttcttctgtaactttagaagtccctcaagtggaagggcgtaacttgaagacaatgatgtgcattgt 5136151  T

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Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 5158895 - 5158810
Alignment:
Q  8 gaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga 94  Q
    |||||||||||||   ||||||||||||| ||  |||| ||| ||||||  |  ||||| |||||||||||||||||||||||||||    
T  5158895 gaaattggaataagcatccttgttgagcgtagtcttgttactgttgatgg-taagaacaaacttggaatgcatgatttgttgcgaga 5158810  T

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Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 5183350 - 5183269
Alignment:
Q  4 tgcagaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttg 86  Q
    ||||||||||||| ||| ||||||||||||| ||||| |||| ||| |||||| || |||||| |||   |||||||||||||    
T  5183350 tgcagaaattggagtaagtgtccttgttgagagaagccttgtaactgttgatg-ataggaacaaactgcaaatgcatgatttg 5183269  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 5342298 - 5342339
Alignment:
Q  4 tgcagaaattggaataaatgtccttgttgagcgaagctttgt 45  Q
    ||||||||||||||||| ||| ||||||||||||||| ||||    
T  5342298 tgcagaaattggaataagtgttcttgttgagcgaagccttgt 5342339  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 5351411 - 5351460
Alignment:
Q  244 tttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgcat 293  Q
    |||||||| |||| |||||||||||||| |||||| |||||||| |||||    
T  5351411 tttgaagttcctcaagtggaagggcgtgacttgaagacaatgatgtgcat 5351460  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 5356017 - 5355933
Alignment:
Q  1 ttatgcagaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttg 86  Q
    |||||| ||||||||||||| | | ||||||||||||||| |||| ||| |||||| ||  ||| || ||| ||||||||||||||    
T  5356017 ttatgctgaaattggaataagtattcttgttgagcgaagccttgtaactgttgatg-ataagaataggcttagaatgcatgatttg 5355933  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 2938920 - 2938972
Alignment:
Q  244 tttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgcattgt 296  Q
    |||||||| |||| |||||||||||||  |||||| |||||||| ||||||||    
T  2938920 tttgaagttcctcaagtggaagggcgtaacttgaagacaatgatgtgcattgt 2938972  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 5156297 - 5156245
Alignment:
Q  244 tttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgcattgt 296  Q
    |||||||| |||| |||||||||||||  |||||| |||||||| ||||||||    
T  5156297 tttgaagttcctcaagtggaagggcgtaacttgaagacaatgatgtgcattgt 5156245  T

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Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 22585720 - 22585630
Alignment:
Q  3 atgcagaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga 94  Q
    ||||||||||||||||||  |||||||||||| ||||| |||||| | |||||| ||  |||||| |||||||||||||||||| |||||||    
T  22585720 atgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatg-ataagaacaggcttggaatgcatgatttgctgcgaga 22585630  T

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Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 36215290 - 36215201
Alignment:
Q  4 tgcagaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga 94  Q
    ||||||||||||| ||| ||| ||||| ||||||||| |||| ||| ||||||| | ||||||| |||||||||||||||||| |||||||    
T  36215290 tgcagaaattggagtaagtgttcttgtagagcgaagccttgtaactgttgatga-taggaacaggcttggaatgcatgatttgctgcgaga 36215201  T

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Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 8876411 - 8876491
Alignment:
Q  8 gaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaatgcatgatttgttg 89  Q
    ||||||||||||| ||| |||||||| |||||| |||| || || ||||||  |||| |  |||||||||||||||||||||    
T  8876411 gaaattggaataagtgttcttgttgaacgaagccttgtaaccatggatgaa-aggaatatgcttggaatgcatgatttgttg 8876491  T

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Target: chr3 (Bit Score: 29; Significance: 0.0000004; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 296
Target Start/End: Complemental strand, 47985729 - 47985625
Alignment:
Q  192 tgataattatccaaattggttgaccttctacagtgaaggttcttcaataatttttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgc 291  Q
    ||||| ||||||||||||||| |||||  |   ||||||||||||  ||| ||||||||| |||| ||||||| ||| |  ||| || |||||||| |||    
T  47985729 tgatagttatccaaattggttaacctttaattctgaaggttcttcggtaacttttgaagtccctcaagtggaaaggcataacttaaagacaatgatgtgc 47985630  T
Q  292 attgt 296  Q
    |||||    
T  47985629 attgt 47985625  T

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Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 296
Target Start/End: Complemental strand, 47995016 - 47994912
Alignment:
Q  192 tgataattatccaaattggttgaccttctacagtgaaggttcttcaataatttttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgc 291  Q
    ||||| ||||||||||||||| |||||  |   ||||||||||||  ||| ||||||||| |||| ||||||| ||| |  ||| || |||||||| |||    
T  47995016 tgatagttatccaaattggttaacctttaattctgaaggttcttcggtaacttttgaagtccctcaagtggaaaggcataacttaaagacaatgatgtgc 47994917  T
Q  292 attgt 296  Q
    |||||    
T  47994916 attgt 47994912  T

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Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 296
Target Start/End: Complemental strand, 48004303 - 48004199
Alignment:
Q  192 tgataattatccaaattggttgaccttctacagtgaaggttcttcaataatttttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgc 291  Q
    ||||| ||||||||||||||| |||||  |   ||||||||||||  ||| ||||||||| |||| ||||||| ||| |  ||| || |||||||| |||    
T  48004303 tgatagttatccaaattggttaacctttaattctgaaggttcttcggtaacttttgaagtccctcaagtggaaaggcataacttaaagacaatgatgtgc 48004204  T
Q  292 attgt 296  Q
    |||||    
T  48004203 attgt 48004199  T

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Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 296
Target Start/End: Complemental strand, 48013588 - 48013484
Alignment:
Q  192 tgataattatccaaattggttgaccttctacagtgaaggttcttcaataatttttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgc 291  Q
    ||||| ||||||||||||||| |||||  |   ||||||||||||  ||| ||||||||| |||| ||||||| ||| |  ||| || |||||||| |||    
T  48013588 tgatagttatccaaattggttaacctttaattctgaaggttcttcggtaacttttgaagtccctcaagtggaaaggcataacttaaagacaatgatgtgc 48013489  T
Q  292 attgt 296  Q
    |||||    
T  48013488 attgt 48013484  T

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