View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6392_low_93 (Length: 239)
Name: NF6392_low_93
Description: NF6392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6392_low_93 |
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Alignment Details
Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 10089790 - 10089570
Alignment:
| Q |
17 |
acatagacaataatgtggacagaactctatgagttattataccattgtcattaatgtttcctcatgcaggattagtttagaagcatttcagttaaaatta |
116 |
Q |
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| T |
10089790 |
acatagacaataatgtggacagaactctatgagttattataccattgtcatttatgtttcctcatgcaggactagtttagaagcatttcagttaaaatta |
10089691 |
T |
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| Q |
117 |
tggcacgaattttagatgtctagttgagtgttaacttagattgctggaaaagaattatgaataatttcatgtttcctagtgtgctggtcactaatatata |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |
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| T |
10089690 |
tggcacgaattttagatgtctagttgagtgttaacttagattgctggaaaagaattatgaagaatttcatgtttcctagtgtgctggtcgctaatatata |
10089591 |
T |
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| Q |
217 |
catacaaatgataaattgaac |
237 |
Q |
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||||||||||| | ||||||| |
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| T |
10089590 |
catacaaatgaaatattgaac |
10089570 |
T |
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