View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6395_high_17 (Length: 225)
Name: NF6395_high_17
Description: NF6395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6395_high_17 |
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Alignment Details
Target: chr4 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 7832069 - 7831882
Alignment:
| Q |
1 |
caatctttcctgtcctttgatgattgcagtttccatcatgtacttctcagaaataggtacatcttctggaacaatatatgccttcaatttcccttgagat |
100 |
Q |
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| T |
7832069 |
caatctttcctgtcctttgatgattgcagtttccatcatgtacttctcagaaataggtacatcttctggaacaatatatgccttcaatttcccttga--- |
7831973 |
T |
|
| Q |
101 |
tcatccaagctcattgagattgtatctttctctatactcctcaacaaatcttccacttcaggatccaaatactctacattacttgagcttgaagcttcct |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7831972 |
-----------------gattgtatctttctctatactcctcaacaaatcttccacttcaggatccaaatactctacattacttgagcttgaagcttcct |
7831890 |
T |
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